BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014529
         (423 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 289/420 (68%), Positives = 351/420 (83%), Gaps = 4/420 (0%)

Query: 4   RSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPV 63
           RS   +++  L+   KLG  LG C+R  SS  ++RFAALWGNGD+GRLGLGSLES+WRP 
Sbjct: 3   RSCMRVSQSALQS--KLG--LGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPA 58

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           VCSAF+ HSL A+ACGGAHTLFLTE+GCVYA GLNDFGQLG+S +  Y+ EPL +S L K
Sbjct: 59  VCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK 118

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +++ I+ GY+HS+AIT DGELYMWGKNSNGQLGLGKKAA  + +P+KVECL+GI  K  A
Sbjct: 119 KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVA 178

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG E SVA T  G+ LSWGAGGSGRLGHG ESS+LGF R++SEY PRLI+ LEG+KVK  
Sbjct: 179 LGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNV 238

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG LHSACIDENG V+IFG+RA+DK  F+E  +A  PS+IS+LPYS++V CGGYHTCV+
Sbjct: 239 AAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVI 298

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           +S GEL+TWGSNENGCLG+G ++ +H PER++GPFS++PV QVSCGWKHTAAISEG + T
Sbjct: 299 SSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISEGNVFT 358

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           WGWGGS+GTFS+DGHSSGGQLG G+DVD+I P +V F E+V+ALQVSCGFNHTGA+LEY+
Sbjct: 359 WGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHTGAILEYI 418


>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 417

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 286/400 (71%), Positives = 335/400 (83%)

Query: 24  LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
           LG   R  S    +RFAALWGNGDYGRLGLG+L+S+W+PVVC AF   +L A+ACGGAHT
Sbjct: 18  LGFPTRSFSRDAGKRFAALWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHT 77

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           LFLTE GCVYATGLNDFGQLG+SE+  YS+EPL + G +K+VVQIS GY+HS AITVDGE
Sbjct: 78  LFLTEDGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQISAGYNHSCAITVDGE 137

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LYMWGKN++GQLGLGK+A  ++P+PTKVE L GI  K AALG E SVA++ GG   SWG 
Sbjct: 138 LYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEHSVAISDGGAAFSWGI 197

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G SGRLGHG ESS+LGF +S SEYTPRLIK+LEG+KVK  AAG L+SAC DENG V++FG
Sbjct: 198 GVSGRLGHGHESSVLGFFKSYSEYTPRLIKDLEGIKVKYVAAGLLNSACTDENGCVFVFG 257

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +R ++K+  +E + A +PSLIS+LP S+EV CGGYHTCVLT+ GELYTWGSNENGCLGIG
Sbjct: 258 ERGIEKLRLKEMSDATKPSLISELPSSKEVACGGYHTCVLTNSGELYTWGSNENGCLGIG 317

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
           S DV+H PE+VQGPF +S V QVSCGWKHTAAISEG++ TWGWGGS+GTFSE GHSS GQ
Sbjct: 318 SSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQ 377

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           LGHG+DVDYI+PT V FGE+VKALQVSCGFNHTGA+LEY 
Sbjct: 378 LGHGSDVDYINPTRVCFGEDVKALQVSCGFNHTGAILEYA 417


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  585 bits (1509), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 300/415 (72%), Positives = 347/415 (83%), Gaps = 6/415 (1%)

Query: 15  KQDIKLGSKLGIC-KRWISSTL---QRRFAALWGNGDYGRLGLGSLESRWRPVV--CSAF 68
           K  + +G  LG C KRW+SS+    ++R AA+WGNGDYGRLG G+L+S WRP +   S+F
Sbjct: 3   KNSVLIGGGLGYCYKRWMSSSSSEGRKRSAAVWGNGDYGRLGYGNLDSMWRPKLMNSSSF 62

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
              +LK+++CGGAHTLFLTETG VYATGLNDFGQLG+S N  Y +EPL +SGLKKE+VQI
Sbjct: 63  HNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLGVSNNTTYCMEPLEVSGLKKEIVQI 122

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S GYHHS AITVDGELY WGKNSNGQLGLGKKA  V+P+PTKVECLSGI  K  AL  E 
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+AVT GG+ LSWG GGSGRLGHG +SS+LGF RS+SEYTPR IK+LEGVKVK  AAG L
Sbjct: 183 SIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLL 242

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           HSACIDENG VYIFG++AVDK+ F + N+A  PS+I KLPYS+EV CGGYHTCV+TSGGE
Sbjct: 243 HSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLPYSQEVACGGYHTCVITSGGE 302

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           LYTWGSNENGCLG GSIDVLH PERV+GPF  SPV++VSCGWKHTAAISEG + TWGWGG
Sbjct: 303 LYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAISEGNVFTWGWGG 362

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           SHGTFSEDG SSGGQLGHG+D DY++PT+V F + +KAL+VSCGFNHTGA+LE V
Sbjct: 363 SHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEKKMKALEVSCGFNHTGAILESV 417


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/394 (69%), Positives = 322/394 (81%), Gaps = 1/394 (0%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           RW +S   +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++  LK +ACGGAHTLFLTE
Sbjct: 88  RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 147

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           +G VYATGLN+FGQLGIS+   +S EP+ +  + KE + IS GY+HS  +T DGELYMWG
Sbjct: 148 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 206

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NSNGQLGLGKK+AK + +PTKV+ L GI  K+AALG + S+AV  GG+V SWG G SGR
Sbjct: 207 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 266

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK  AAG LHSAC+DENG VYIFG+RA +
Sbjct: 267 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 326

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           ++ F E N A  PSLIS L   EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS  V 
Sbjct: 327 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 386

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           H PERV+GPFS+SPV +VSCGWKHTAAIS G I TWGWGGSHGTFS DGHSSGGQLGHG+
Sbjct: 387 HLPERVEGPFSKSPVSKVSCGWKHTAAISGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGS 446

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           DVDY+ PT ++ GENVK +QVSCGFNHTGA+LEY
Sbjct: 447 DVDYVKPTKIDLGENVKVVQVSCGFNHTGAILEY 480


>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC4-like [Glycine max]
          Length = 404

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/386 (69%), Positives = 329/386 (85%), Gaps = 1/386 (0%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           +RF ALWGNGD+GRLGLG+L+S+W+PVVC AF   +LKA+ACGGAHTLFLT+ GCVYATG
Sbjct: 19  KRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFLTDNGCVYATG 78

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LNDFGQLG+SE+  YS+EPL + G +K+VVQ+S GY+HS AITVDGELYMWGKN++ QLG
Sbjct: 79  LNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVDGELYMWGKNTSVQLG 138

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LGK+A  ++P+PTKVE L+GI  K AALG + S+A++ GG+  SWG G SGRLGHG ESS
Sbjct: 139 LGKRAPNIVPLPTKVEYLNGINIKMAALGSDHSLAISDGGEAFSWGVGVSGRLGHGHESS 198

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           ILGF +S SEYTPRLIK+LEG+KVK  A+G L+SAC DENG V++FG+RA++++  +  +
Sbjct: 199 ILGFFKSYSEYTPRLIKDLEGIKVKYVASGLLNSACTDENGSVFVFGERAIERLRLKAMS 258

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            A +PSLI +LP S +VVCGGYHTCVLT+ GELYTW SNENGCLGIGS DV+H PE++ G
Sbjct: 259 DATKPSLIGELP-SSKVVCGGYHTCVLTNSGELYTWXSNENGCLGIGSSDVIHLPEKIXG 317

Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
           PF +S V Q+SCGWK+TAAISEG++ TWGWGGS+GTFSE GHSS GQLGHG+DVDYI+PT
Sbjct: 318 PFLKSSVSQLSCGWKNTAAISEGRVFTWGWGGSNGTFSEVGHSSSGQLGHGSDVDYINPT 377

Query: 397 IVNFGENVKALQVSCGFNHTGALLEY 422
            V FGE+VKALQVSCGFNHTGA+LEY
Sbjct: 378 RVCFGEDVKALQVSCGFNHTGAILEY 403



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 27/206 (13%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+  +G   V  WG G  GRLG G            S++ P +        +K  A G  
Sbjct: 13  SLRASGKRFVALWGNGDFGRLGLGNLD---------SQWKPVVCPAFRDRTLKAIACGGA 63

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSEEVVCGGY-HTCVLTSG 306
           H+  + +NG VY  G     ++   E  H +  P  +         V  GY H+C +T  
Sbjct: 64  HTLFLTDNGCVYATGLNDFGQLGVSESKHYSVEPLCVFGEEKKVVQVSAGYNHSCAITVD 123

Query: 307 GELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
           GELY WG N +  LG+G  + +++  P +V+   +   +   + G  H+ AIS+ G+  +
Sbjct: 124 GELYMWGKNTSVQLGLGKRAPNIVPLPTKVE-YLNGINIKMAALGSDHSLAISDGGEAFS 182

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGND 389
           WG G S            G+LGHG++
Sbjct: 183 WGVGVS------------GRLGHGHE 196


>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
 gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 434

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 274/409 (66%), Positives = 332/409 (81%)

Query: 14  LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
           L +D KLG     C RW+SS   +RFAA+WG+GDYGRLGLG+L+S+W P VCSA   HS+
Sbjct: 25  LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+ACGGAHTLFLTET  V+ATGLND GQLG+S+   ++++PL +SGL K+++ IS GY+
Sbjct: 85  TAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYY 144

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  ALG E SVAVT
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVT 204

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV   AAG LHSAC 
Sbjct: 205 DGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACT 264

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           DENG  ++FG+++++KM F    +A  PS+IS++PY+EEV CGGYHTCV+T GGELYTWG
Sbjct: 265 DENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACGGYHTCVVTRGGELYTWG 324

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
           SNENGCLG  S  V HSP RV+GPF ES V QVSCGWKHTAAIS+  + TWGWGGSHGTF
Sbjct: 325 SNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTF 384

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           S DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 385 SVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433


>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 434

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 273/407 (67%), Positives = 333/407 (81%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
           +D KLG     C+RW+S+   +RFAA+WG+GDYGRLGLG+L+S+W P  CSA   HS++A
Sbjct: 27  KDSKLGPIGVSCRRWLSNESGKRFAAMWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRA 86

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACGGAHTLFLTET  V+ATGLND GQLG+S+   ++++PL +SGL K+++ IS GY+HS
Sbjct: 87  VACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISAGYYHS 146

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           +AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  ALG E SVAVT G
Sbjct: 147 AAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDG 206

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KVK  AAG LHSAC DE
Sbjct: 207 GEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVKNVAAGLLHSACTDE 266

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           NG  ++FG+R+++KM F    +A  PS+IS++PY+E V CGGYHTCV+T GGELYTWGSN
Sbjct: 267 NGSAFMFGERSINKMGFGGVRNATTPSIISEVPYAEGVACGGYHTCVVTRGGELYTWGSN 326

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
           ENGCLG  S  V HSP RV+GPF ES V QVSCGWKHTAAIS+ K+ TWGWGGSHGTFS 
Sbjct: 327 ENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHGTFSV 386

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 387 DGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 433


>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
          Length = 435

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 267/419 (63%), Positives = 324/419 (77%), Gaps = 19/419 (4%)

Query: 14  LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSL 73
           L +D KLG     C RW+SS   +RFAA+WG+GDYGRLGLG+L+S+W P VCSA   HS+
Sbjct: 25  LLKDSKLGPIGVCCSRWVSSESGKRFAAMWGSGDYGRLGLGNLDSQWTPAVCSALSDHSI 84

Query: 74  KALACGGAHTLFLT----------ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
            A+ACGGAHTLFLT          ET  V+ATGLND GQLG+S+   ++++PL +SGL K
Sbjct: 85  TAVACGGAHTLFLTVSDNKLTHVTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDK 144

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +++ IS GY+HS+AITVDGELYMWGKNS+GQLGLGKKAA+V+ +PTKVE L GI  +  A
Sbjct: 145 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 204

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG E SVAVT GG+VLSWG GGSGRLGHG +SS+ G LRS SE+TPRLIKELEG+KV   
Sbjct: 205 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNV 264

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG LHSAC DENG  ++FG+++++KM F    +A  PS+IS++PY+EEV CG       
Sbjct: 265 AAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEVACG------- 317

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
             GGELYTWGSNENGCLG  S  V HSP RV+GPF ES V QVSCGWKHTAAIS+  + T
Sbjct: 318 --GGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAISDNNVFT 375

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           WGWGGSHGTFS DGHSSGGQLGHG+DVDY  P +V+ G+NV+A+ +SCGFNHT A+LE+
Sbjct: 376 WGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNHTAAVLEH 434


>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
 gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
          Length = 418

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 240/390 (61%), Positives = 301/390 (77%), Gaps = 5/390 (1%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCV 92
           ++R AALWGNGDYGRLGLG LESRW P VC  F   +     +LACGGAHTLFLT++G V
Sbjct: 28  RQRVAALWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGRV 87

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           +ATGLNDFGQLG+  ++ ++LEP+ +SG  + VV++S G HHS A+T DG+L++WG+NS 
Sbjct: 88  FATGLNDFGQLGVGSSVTHTLEPVEVSGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSG 147

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLGLGK A KV+  PTKV+CL+    K  ALG E S+AVT  G+VLSWGA GSGRLGHG
Sbjct: 148 GQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHG 207

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
           ++SSILGF  +TSEYTPRLIK  +G+K+K  AAG LHSACIDE G ++IFG +   +  F
Sbjct: 208 RQSSILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFIFGQKT--EKGF 265

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              N A RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D++ SPE
Sbjct: 266 GRSNEAFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVCSPE 325

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            ++    + PV +VSCGWKHTA IS   I TWGWGG++GTF E+GHSSGGQLGHGNDVDY
Sbjct: 326 ILKSSLFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 385

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLEY 422
             P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 386 FEPMMVPFGKNARAVHVSCGFNHTGAIYEY 415


>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
 gi|194695574|gb|ACF81871.1| unknown [Zea mays]
 gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 418

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 242/402 (60%), Positives = 303/402 (75%), Gaps = 11/402 (2%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACIDE G +
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTL 252

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +IFG +   +  F   N   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGC
Sbjct: 253 FIFGQKT--EKGFGRPNEEFRPNIVEEIPFSEEVACGGYHTCVVTDSGDLYSWGSNENGC 310

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
           LG+G  D++ SPE ++    + PV +VSCGWKHTA +S   I TWGWGG++GTF E+GHS
Sbjct: 311 LGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANGTFFEEGHS 370

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           SGGQLGHGNDVDY  P +V FG N +A+ VSCGFNHTGA+ E
Sbjct: 371 SGGQLGHGNDVDYFEPMMVPFGTNARAVHVSCGFNHTGAIYE 412


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/395 (60%), Positives = 302/395 (76%), Gaps = 10/395 (2%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHTLFLT
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           E+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L+ W
Sbjct: 90  ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 209

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           + SPE ++    + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHG
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           NDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 388 NDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score =  500 bits (1288), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 239/395 (60%), Positives = 302/395 (76%), Gaps = 10/395 (2%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHTLFLT
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLT 89

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           E+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L+ W
Sbjct: 90  ESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAW 149

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 150 GRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLSWGAAGAG 209

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 210 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 268

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G  D+
Sbjct: 269 EKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDM 327

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           + SPE ++    + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHG
Sbjct: 328 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 387

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           NDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 388 NDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 422


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 238/405 (58%), Positives = 298/405 (73%), Gaps = 13/405 (3%)

Query: 29  RWISS--------TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALA 77
           RW+S+           RR AALWGNGDYGRLGLG+LESRW P  C  F   +     +LA
Sbjct: 17  RWLSTEAVAGSGEPAWRRVAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLA 76

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           CGGAHTLFLT++G V+ATGLNDFGQLGI  +  + ++P+ ++G  ++VVQIS G HHS A
Sbjct: 77  CGGAHTLFLTQSGRVFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKVVQISAGNHHSCA 136

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +T DGEL++WGKNS+GQLGLGK   KV+  P KV+ L+ +  +  ALG E S+AVT GG+
Sbjct: 137 VTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTEGGE 196

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            LSWGA G+GRLGHG +SSILGF   +SEYTPRLIK L+GVK+K  AAG LHSACIDE G
Sbjct: 197 ALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKG 256

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            ++IFG +   + +F   N A RP+++ ++ +SEEV CGGYHTC LT GG+LY+WGSNEN
Sbjct: 257 TLFIFGQKT--EKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGGDLYSWGSNEN 314

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           GCLG+G   ++ SPE ++    + PV +VSCGWKHTA IS   I TWGWGG++GTF E+G
Sbjct: 315 GCLGLGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEG 374

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
            SSGGQLGHGNDVDY  P +V  G N +A+ VSCGFNHTGA+ EY
Sbjct: 375 QSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSCGFNHTGAIFEY 419


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  483 bits (1242), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/391 (60%), Positives = 293/391 (74%), Gaps = 5/391 (1%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF---EKHSLKALACGGAHTLFLTETGCV 92
           +RR AALWGNGD+GRLGLG+LESRW P  C  F         +L+CGGAHTLFLTE G V
Sbjct: 29  RRRVAALWGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRV 88

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           +ATGLNDFGQLGI  ++ ++L+P+ +SG  ++VVQIS G HHS A+T DGEL++WGKNS+
Sbjct: 89  FATGLNDFGQLGIGSSMPHTLDPVEVSGFHEKVVQISAGNHHSCAVTADGELFVWGKNSS 148

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLGLGK A KV+  P KV+ L+ +  K  ALG E S+ VT  G+ LSWGA G GRLGHG
Sbjct: 149 GQLGLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTEDGEALSWGAAGGGRLGHG 208

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            +SS LGF  +++EYTPRLIK L+G+K+K  AAG LHSACIDE G V+IFG +  +K+L 
Sbjct: 209 HKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFGQK-TEKVLG 267

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           +  N A RPS++ ++ +SEEV CGGYHTC +T  G+LY+WGSNENGCLG+G   ++  PE
Sbjct: 268 RS-NDAPRPSVVEEIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPE 326

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V     + PV +VSCGWKHTA IS   I TWGWGG++GTF E+GHSSGGQLGHGNDVDY
Sbjct: 327 VVSSSLFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDY 386

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
             P +V   +N +A+ VSCGFNHTGA+LEY 
Sbjct: 387 CEPMMVELHKNARAVHVSCGFNHTGAILEYA 417


>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
 gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
           [Ricinus communis]
          Length = 374

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/321 (66%), Positives = 259/321 (80%), Gaps = 2/321 (0%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLF 85
           +RW+SS   +R+AA+WGNGD+GRLG GSL+S+WRP  ++ S F  HSLK++ACGGAHTLF
Sbjct: 11  RRWMSSEAGKRYAAVWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLF 70

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           LTETGCVYATGLNDFGQLGIS N+ Y+ EP+++SGL+KE++QIS GYHHS AITVDGELY
Sbjct: 71  LTETGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAITVDGELY 130

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           MWG+NSNGQLGLGKKA +++P+PTKVE L+G+  K  ALG E S+AVT  G+ LSWG GG
Sbjct: 131 MWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEHSIAVTDRGEALSWGLGG 190

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            GRLGH  +S    F  STSEYTPR IK+LE VKVK  AAG LHSACID NG V++FG+ 
Sbjct: 191 FGRLGHSNQSGTFRFWTSTSEYTPRSIKKLEEVKVKSVAAGLLHSACIDVNGSVFVFGEV 250

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +VD+  F E   A  PS++ KLP + EV CGGYHTCV+TSGGELY WG NENGCLGIGS 
Sbjct: 251 SVDRTGFGEAIGAEIPSMVGKLPCANEVSCGGYHTCVVTSGGELYAWGVNENGCLGIGSF 310

Query: 326 DVLHSPERVQGPFSESPVDQV 346
           + LH+PERVQGPF  SPV++V
Sbjct: 311 NSLHAPERVQGPFLRSPVEKV 331



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 311 TWGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
            WG+ + G LG GS+D    P+ +    F+   +  ++CG  HT  ++E           
Sbjct: 25  VWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLTE----------- 73

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G     G +  GQLG   ++ Y    +   G   + +Q+S G++H+ A+
Sbjct: 74  TGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISAGYHHSCAI 123


>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Cucumis sativus]
          Length = 386

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 210/317 (66%), Positives = 253/317 (79%), Gaps = 1/317 (0%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
           RW +S   +RF A+WGNGD+GRLGLG+L+S+W PV CS+F++  LK +ACGGAHTLFLTE
Sbjct: 71  RWFASDSGKRFGAVWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTE 130

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           +G VYATGLN+FGQLGIS+   +S EP+ +  + KE + IS GY+HS  +T DGELYMWG
Sbjct: 131 SGRVYATGLNNFGQLGISDEKRFSTEPVEVR-IPKEAMHISAGYNHSCVVTADGELYMWG 189

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NSNGQLGLGKK+AK + +PTKV+ L GI  K+AALG + S+AV  GG+V SWG G SGR
Sbjct: 190 VNSNGQLGLGKKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRSGR 249

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG ES+ LGFL+STSE+TPRLIKELEG+KVK  AAG LHSAC+DENG VYIFG+RA +
Sbjct: 250 LGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFGERATN 309

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           ++ F E N A  PSLIS L   EEV CGGYHTCVLT GG+LY+WGSNENGCLG GS  V 
Sbjct: 310 RVSFGEANKATTPSLISTLLDCEEVACGGYHTCVLTKGGDLYSWGSNENGCLGNGSTSVS 369

Query: 329 HSPERVQGPFSESPVDQ 345
           H PERV+GPFS+SPV +
Sbjct: 370 HLPERVEGPFSKSPVSK 386



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 134/293 (45%), Gaps = 37/293 (12%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWG 148
           G V+  G  DFG+LG+  N+     P+  S   +E+++ I+ G  H+  +T  G +Y  G
Sbjct: 82  GAVWGNG--DFGRLGLG-NLDSQWSPVPCSSFDREMLKGIACGGAHTLFLTESGRVYATG 138

Query: 149 KNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKVLSWGAG 204
            N+ GQLG+  +K     P+  ++        K+A   + G+  S  VT  G++  WG  
Sbjct: 139 LNNFGQLGISDEKRFSTEPVEVRI-------PKEAMHISAGYNHSCVVTADGELYMWGVN 191

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
            +G+LG G++S+        + + P  +  L+G+ +K AA G  HS  + + G V+ +GD
Sbjct: 192 SNGQLGLGKKSA-------KAVHLPTKVDSLDGIVIKRAALGSDHSIAVADGGEVFSWGD 244

Query: 265 RAVDKML---------FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
               ++          F +      P LI +L     + V  G  H+  +   G +Y +G
Sbjct: 245 GRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDENGAVYIFG 304

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
                 +  G  +   +P  +         ++V+CG  HT  +++ G + +WG
Sbjct: 305 ERATNRVSFGEANKATTPSLISTLLD---CEEVACGGYHTCVLTKGGDLYSWG 354


>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
 gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
          Length = 400

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/338 (60%), Positives = 264/338 (78%), Gaps = 2/338 (0%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           FLTE+G V+A GLNDFGQLGI  ++ +SLEP+ +SG  ++VV++S G HHS A+T DG+L
Sbjct: 62  FLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKL 121

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG+NS+GQLGLGK+A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA 
Sbjct: 122 FAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAA 181

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           G+GRLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG 
Sbjct: 182 GAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQ 241

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           +  +K   + G+   RP+++ ++P+SEEV CGGYHTCV+T  G+LY+WGSNENGCLG+G 
Sbjct: 242 K-TEKGFGRSGDEL-RPTVVEEVPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGG 299

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
            D++ SPE ++    + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQL
Sbjct: 300 TDMVRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQL 359

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           GHGNDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 360 GHGNDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 397



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 162/348 (46%), Gaps = 45/348 (12%)

Query: 37  RRFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FAA  G  D+G+LG+G S+     P+  S F++  ++ ++ G  H+  +T  G ++A 
Sbjct: 68  RVFAA--GLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVE-VSAGNHHSCAVTADGKLFAW 124

Query: 96  GLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
           G N  GQLG+ +  G  +  P ++  L    V+ ++ G  HS A T +GE+  WG    G
Sbjct: 125 GRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 184

Query: 154 QLGLGKKAAKV-------IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +LG G K + +          P  ++ L G+  K+ A G   S  +   G +  +G    
Sbjct: 185 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG---- 240

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
                  + +  GF RS  E  P +++E+     ++A  G+ H+  + ++G +Y +G   
Sbjct: 241 -------QKTEKGFGRSGDELRPTVVEEVP-FSEEVACGGY-HTCVVTDSGDLYSWGSNE 291

Query: 267 VDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGELYTW---------- 312
              +     +  R P ++     K P S +V CG  HT V+ SGG++YTW          
Sbjct: 292 NGCLGLGGTDMVRSPEVLKSSLFKFPVS-KVSCGWKHTAVI-SGGDIYTWGWGGANGTFF 349

Query: 313 --GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
             G +  G LG G+      P  V+   +   V  VSCG+ HT AI E
Sbjct: 350 EEGHSSGGQLGHGNDVDYFEPMMVEFGKNARAV-HVSCGFNHTGAIFE 396


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 192/423 (45%), Positives = 264/423 (62%), Gaps = 16/423 (3%)

Query: 4   RSLTAMTKYY---LKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
           RS+    + Y    K  ++L  K G  KRW+         ALWGNGD GRLGL    S++
Sbjct: 2   RSVIKRRRAYGLTAKNKVELSGKAG--KRWV---------ALWGNGDQGRLGLSESGSQF 50

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+C A E H   +++CGGAHTL LT+ G V+ATGLN  GQLG+      S +P+ + G
Sbjct: 51  EPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHG 110

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
                V I+ G +HS+AIT  GE Y+WG+NS GQLGLGK+A  V   P K+E L+G+  K
Sbjct: 111 FPDPCVHIAAGRYHSAAITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLK 170

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             ALG + S+ +   G+VLSWG    G LGHG+ +    F + T+EYTPR+I  LE +++
Sbjct: 171 ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQI 230

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           +  +AG +HSAC D++G +Y FG  ++ ++     N A +P  I  LP    + CGGYHT
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVSSISCGGYHT 290

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
             +T  G++YTWGSNE+GCLG G       P R++   +E+ + ++SCGWKHTAAIS+G 
Sbjct: 291 GAITQDGDIYTWGSNEHGCLGSG-FRASSKPLRLES-LAEAFMSEISCGWKHTAAISDGY 348

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           I +WGWGGS+GT++    SSGGQLG G D D+  P  +   + + AL VSCGFNHT A+L
Sbjct: 349 IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAIL 408

Query: 421 EYV 423
           E +
Sbjct: 409 EEI 411


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/393 (47%), Positives = 254/393 (64%), Gaps = 2/393 (0%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           +S    +R+ ALWGNGD GRLGL    S++ PV+C A E H   +++CGGAHTL LT+ G
Sbjct: 21  VSGKAGKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V+ATGLN  GQLG+      S +P+ + G     V I+ G +HS+AIT  GE Y+WG+N
Sbjct: 81  RVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVWGRN 140

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S GQLGLGK+A  V   P K+E L+G+  K  ALG + S+ +   G+VLSWG    G LG
Sbjct: 141 SEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGCLG 200

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG+ +    F + T+EYTPR+I  LE ++V+  +AG +HSAC D++G +Y FG  ++ ++
Sbjct: 201 HGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQL 260

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                N A +P  I  LP    + CGGYHT  +T  G++YTWGSNE+GCLG G       
Sbjct: 261 GLGNNNDASQPCPIPDLPRVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSG-FRASSK 319

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           P R++   +E+ + ++SCGWKHTAAIS+G I +WGWGGS+GT++    SSGGQLG G D 
Sbjct: 320 PLRLES-LAEAFMSEISCGWKHTAAISDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDF 378

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           D+  P  +   + + AL VSCGFNHT A+LE +
Sbjct: 379 DFFEPVPIEMDDRLSALHVSCGFNHTAAILEEI 411


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  362 bits (929), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 193/394 (48%), Positives = 248/394 (62%), Gaps = 9/394 (2%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           + R+ ALWGNGDYGRLG  S ES W P VC + +     ALACGGAHTL LTE G VYA+
Sbjct: 7   KHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQHLQPIALACGGAHTLVLTEEGRVYAS 66

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNG 153
           GLND+GQLG+  + G+S+E L + GL  E     I+ G  HS+AI+ DG +YMWG+N+ G
Sbjct: 67  GLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISEDGRVYMWGRNTQG 126

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGLGK+    +     VE L     +  ALG E S+A++  G+VLSWG   +GRLGHG+
Sbjct: 127 QLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGE 186

Query: 214 ---ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
               SS+    R +SEYTPRL+K    VKV   AAG  HSAC+DE G ++ FG     ++
Sbjct: 187 GHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQL 246

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVL 328
                     P  +  +P  EE+ CGGYHT  ++  G+LY WGSNE GCLG G    +  
Sbjct: 247 GLGGDRDISEPKRVPVIPPVEEIACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNAT 306

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             P  V+G      V QV CGWKHT A++ +G +  WGWGGS GT   DG SSGGQLG G
Sbjct: 307 SLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLG 366

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           N+ D++ PT V   +N+KA+Q+SCGFNH+GA+LE
Sbjct: 367 NENDFLEPTQVK-SKNMKAIQISCGFNHSGAILE 399


>gi|77551420|gb|ABA94217.1| uvb-resistance protein uvr8, possible, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 362

 Score =  328 bits (842), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 183/395 (46%), Positives = 231/395 (58%), Gaps = 73/395 (18%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF--------EKHSLKALACGGAHTLFLT 87
           +RR AALWGNGDYGRLG+G+LESRW P  C  F        +     +LACGGAHT    
Sbjct: 30  RRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHT---- 85

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
                                   S EP+ +SG  ++VV++S G HHS A+T        
Sbjct: 86  ----------------------SSSPEPIEVSGFDEKVVEVSAGNHHSCAVT-------- 115

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
                        A KV+  P KV+CL+    K  ALG E S+A T  G+VLSWGA G+G
Sbjct: 116 ------------GAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLSWGAAGAG 163

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG ++SILGF  +TSEYTPRLIK L+GVK+K  AAG LHSACIDE G ++IFG +  
Sbjct: 164 RLGHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQK-T 222

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +K+ F       RP+++ +L      +    +   LTSG                   D+
Sbjct: 223 EKVGFGRSGDELRPTVVEELYQCLSKLRMFAYIKFLTSG------------------TDM 264

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           + SPE ++    + PV +VSCGWKHTA IS G I TWGWGG++GTF E+GHSSGGQLGHG
Sbjct: 265 VRSPEVLKSSLFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG 324

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           NDVDY  P +V FG+N +A+ VSCGFNHTGA+ EY
Sbjct: 325 NDVDYFEPMMVEFGKNARAVHVSCGFNHTGAIFEY 359


>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
           truncatula]
 gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
           truncatula]
          Length = 244

 Score =  323 bits (829), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 152/208 (73%), Positives = 178/208 (85%)

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S I+ FL+S SEY+PRLIK+LEG+KVK  AAG L SAC DENG V+IFGD+ +DK+L + 
Sbjct: 36  SIIMYFLKSCSEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKLLLKG 95

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            ++  +PSLIS+LPY+EEV CGGYHTCVLT+ GELYTWGSNENGCLGIGS   +H PE+V
Sbjct: 96  TSNTTKPSLISELPYAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKV 155

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           QGPF ES V QVSCGWKHTAAIS G+I TWGWGGS+GTFS+DGHSSGGQLGHG+DVDYI+
Sbjct: 156 QGPFLESSVVQVSCGWKHTAAISGGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYIN 215

Query: 395 PTIVNFGENVKALQVSCGFNHTGALLEY 422
           P+ V F E+VKALQVSCGFNHTGA+ EY
Sbjct: 216 PSRVCFAEDVKALQVSCGFNHTGAIFEY 243



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S + P +    E   +K +A G   +    E G V+  G     +L + +    + +P  
Sbjct: 46  SEYSPRLIKDLEGIKVKYVAAGMLTSACTDENGSVFIFGDKGIDKL-LLKGTSNTTKPSL 104

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           IS L     +++ G +H+  +T  GELY WG N NG LG+G   A  I +P KV+   G 
Sbjct: 105 ISELPY-AEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYA--IHLPEKVQ---GP 158

Query: 178 FTK----QAALGFEQSVAVTGGGKVLSWGAGGS------------GRLGHGQESSILGFL 221
           F +    Q + G++ + A++ GG++ +WG GGS            G+LGHG +   +   
Sbjct: 159 FLESSVVQVSCGWKHTAAIS-GGRIFTWGWGGSNGTFSDDGHSSGGQLGHGSDVDYI--- 214

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                  P  +   E VK    + GF H+  I E
Sbjct: 215 ------NPSRVCFAEDVKALQVSCGFNHTGAIFE 242


>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  294 bits (753), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 147/238 (61%), Positives = 180/238 (75%), Gaps = 9/238 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACIDE G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKG 250



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 35/236 (14%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 375
            LG+  G+  V+ +P +V    ++  V  V+ G +H+ A++ EG++L+WG  GS      
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS------ 199

Query: 376 DGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G+LGHG             +Y    I NF + +K  +++ G  H+  + E
Sbjct: 200 ------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACIDE 248


>gi|294463585|gb|ADE77321.1| unknown [Picea sitchensis]
          Length = 243

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 140/239 (58%), Positives = 176/239 (73%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           ALG E S+A+T  GKVLSWG G +GRLGHG +SS+  FL  +SE+TP+LIK LEG+KV  
Sbjct: 3   ALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCK 62

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            AAG LHS+CIDENG V+ FG   + ++       +  PS++  LP+ ++V CGGYHTC 
Sbjct: 63  IAAGLLHSSCIDENGTVFTFGQGRMYQLGLGHMKDSSVPSIVKDLPFVQQVACGGYHTCA 122

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           ++S G+LYTWGS+ENGCLG+GS  +  SPERV+G      V +VSCGWKHTA IS G + 
Sbjct: 123 ISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGWKHTAVISGGNVF 182

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           TWGWGGS+GTFS+DG SSGGQLG GND DY+ P+ V F  N +ALQ+SCGFNHT A+ E
Sbjct: 183 TWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQFDRNFQALQISCGFNHTAAIFE 241



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 123/253 (48%), Gaps = 35/253 (13%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI-------PTKVECLSGIFTK 180
           I+ G  HS A+T DG++  WG   NG+LG G +++    +       P  ++ L GI   
Sbjct: 2   IALGSEHSLALTEDGKVLSWGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVC 61

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           + A G   S  +   G V ++G G   +LG       LG ++ +S   P ++K+L  V+ 
Sbjct: 62  KIAAGLLHSSCIDENGTVFTFGQGRMYQLG-------LGHMKDSS--VPSIVKDLPFVQ- 111

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI--SKLP-YSEEVVCGG 297
           ++A  G+ H+  I  +G +Y +G      +     + A  P  +  S LP +  EV CG 
Sbjct: 112 QVACGGY-HTCAISSSGDLYTWGSSENGCLGLGSKSLAPSPERVEGSLLPLHVSEVSCGW 170

Query: 298 YHTCVLTSGGELYTW---GSN---------ENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
            HT V+ SGG ++TW   GSN           G LG+G+      P RVQ   +   + Q
Sbjct: 171 KHTAVI-SGGNVFTWGWGGSNGTFSDDGFSSGGQLGLGNDFDYLEPSRVQFDRNFQAL-Q 228

Query: 346 VSCGWKHTAAISE 358
           +SCG+ HTAAI E
Sbjct: 229 ISCGFNHTAAIFE 241



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 106/235 (45%), Gaps = 36/235 (15%)

Query: 43  WGNGDYGRLGLGSLESRWR---------PVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WG G+ GRLG G   S ++         P +    E   +  +A G  H+  + E G V+
Sbjct: 21  WGLGENGRLGHGYQSSMFKFLEDSSEHTPKLIKYLEGIKVCKIAAGLLHSSCIDENGTVF 80

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G     QLG+      S+ P  +  L   V Q++ G +H+ AI+  G+LY WG + NG
Sbjct: 81  TFGQGRMYQLGLGHMKDSSV-PSIVKDLPF-VQQVACGGYHTCAISSSGDLYTWGSSENG 138

Query: 154 QLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS------ 206
            LGLG K+  + P P +VE  L  +   + + G++ + AV  GG V +WG GGS      
Sbjct: 139 CLGLGSKS--LAPSPERVEGSLLPLHVSEVSCGWKHT-AVISGGNVFTWGWGGSNGTFSD 195

Query: 207 ------GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                 G+LG G +   L          P  ++     +    + GF H+A I E
Sbjct: 196 DGFSSGGQLGLGNDFDYL---------EPSRVQFDRNFQALQISCGFNHTAAIFE 241


>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 263

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 146/238 (61%), Positives = 179/238 (75%), Gaps = 9/238 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACID  G
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDGKG 250



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 35/234 (14%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 375
            LG+  G+  V+ +P +V    ++  V  V+ G +H+ A++ EG++L+WG  GS      
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS------ 199

Query: 376 DGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LGHG             +Y    I NF + +K  +++ G  H+  +
Sbjct: 200 ------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACI 246


>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 261

 Score =  290 bits (743), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 145/235 (61%), Positives = 178/235 (75%), Gaps = 9/235 (3%)

Query: 29  RWISSTL------QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACG 79
           RW+SS        ++R AALWGNGDYGRLGLGSLESRW P VC  F   +     +LACG
Sbjct: 13  RWLSSDAASSKAPRQRVAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACG 72

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           GAHTLFLT+ G V+ATGLNDFGQLGI  ++ + LEP+ ISG  + VV++S G HHS A+T
Sbjct: 73  GAHTLFLTQNGRVFATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVT 132

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG+L++WG+NS GQLGLGK A KV+  PTKV+CL+ +  K  ALG E S+AVT  G+VL
Sbjct: 133 ADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVL 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           SWGA GSGRLGHG++SSILGF  +++EYTPRLIK  +G+K+K  AAG LHSACID
Sbjct: 193 SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACID 247



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 35/234 (14%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLG G   S     R +    P  +         +A  G  H+  + +NGRV+
Sbjct: 33  WGNGDYGRLGLGSLES-----RWSPTVCPFFLARAADPPASLACGG-AHTLFLTQNGRVF 86

Query: 261 IFGDRAVDKM-LFQEGNHARRPSLISKL-PYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++ +     H   P  IS       EV  G +H+C +T+ G+L+ WG N  G
Sbjct: 87  ATGLNDFGQLGIGTSVTHMLEPVEISGFHERVVEVSAGNHHSCAVTADGKLFVWGRNSGG 146

Query: 319 CLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 375
            LG+  G+  V+ +P +V    ++  V  V+ G +H+ A++ EG++L+WG  GS      
Sbjct: 147 QLGLGKGAGKVVSTPTKVDC-LTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGS------ 199

Query: 376 DGHSSGGQLGHGND----------VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LGHG             +Y    I NF + +K  +++ G  H+  +
Sbjct: 200 ------GRLGHGRQSSILGFSLTSTEYTPRLIKNF-DGIKIKKIAAGMLHSACI 246


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 155/406 (38%), Positives = 227/406 (55%), Gaps = 22/406 (5%)

Query: 31  ISSTLQRRFAAL-WGNGDYGRLGLGSLESR---WRPVVCSAFE------KHSLKALACGG 80
           + +  +R + AL  GNGD+GRLG GS +     W P   + F          ++A+A GG
Sbjct: 17  VLTQYRREYIALSAGNGDHGRLGHGSPDEAHDGWSPRSSNYFHPVEGVSDLDVRAVAAGG 76

Query: 81  AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           AH++FL   G V+  GLN  GQLG S  + +S EP+ +  L  EVV ++ G  H+  + V
Sbjct: 77  AHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVR-LDVEVVSVAAGNGHTLCVDV 135

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG-IFTKQAALGFEQSVAVTGGGKVL 199
           DG ++ +GKN+ GQLG G        IP K+  L+      Q A G E S+AV   G+V 
Sbjct: 136 DGCVWAFGKNTAGQLGTGNVDGT---IPRKIGALAKEARVAQVACGAEHSLAVADDGRVY 192

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTS--EYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           SWG+   G LGHG E+   G+   T+  E  PRL++ LE  KV   AAG +HSACID+ G
Sbjct: 193 SWGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRG 252

Query: 258 RVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            +Y +G    +++    +  +H   PS +  L +  E+ CGG H+   T+ G + +WG+N
Sbjct: 253 NLYTWGQGRFNQLGLSAKPSDHETTPSPVMSLRFVHEIACGGLHSLANTNAG-VVSWGAN 311

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
           ++G LG G    + S              +++ GWKH+A I+ GK+  WG+GGS G++++
Sbjct: 312 QHGELGHGHHSDIKSAVPKPIKMGSRGWSKLAAGWKHSAGIANGKLFAWGFGGSMGSYAD 371

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           +  SSGGQLG GN+ D+  P  V+    VK   VSCGFNHT AL++
Sbjct: 372 EKMSSGGQLGLGNEFDFWEPHEVSVPGEVK--DVSCGFNHTLALVD 415


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/396 (39%), Positives = 220/396 (55%), Gaps = 22/396 (5%)

Query: 37  RRFAALWGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           RR  A +GNGD GRLG  SLE  S   P V  A     LKA+ACGGAHT  + ++G VY 
Sbjct: 2   RRVLATFGNGDCGRLGH-SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYT 60

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GLND GQLG          P  ++ + + VV +S GY+H+  +   G ++ +G N  GQ
Sbjct: 61  WGLNDKGQLGHDSEDSEVGLPGEVA-MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LGLGK    ++  P  V+ L        A G E S+A+T GG+V SWG   +GRLGHG  
Sbjct: 120 LGLGKDVV-LVREPRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSA 178

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +    F  S+ E+ PRL++  E ++V+  +AG +HSA +   G  +++G     ++ F  
Sbjct: 179 TPRRLF-GSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGS 237

Query: 275 GNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P+++  L  S   V CG  H+  L  GG +  WG+N+NG LG G        E+
Sbjct: 238 DEDLAGPTVLPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGH-------EK 290

Query: 334 VQGPFSESPV-----DQVSCGWKHTAAIS-EGKILTWGWGGSHGT-FSEDGHS-SGGQLG 385
            Q P   S V     +Q++ GWKH+AA++  GK+ TWGWGGS GT  S +G + +GGQLG
Sbjct: 291 QQQPKRPSKVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLG 350

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           HGND DY  P  V++    +   V+CG NHT A++E
Sbjct: 351 HGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVE 386


>gi|384247688|gb|EIE21174.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 367

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/373 (36%), Positives = 207/373 (55%), Gaps = 16/373 (4%)

Query: 35  LQRRF---AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + RR     A WGNGDYGRLG    +S   P +  A       ++ACGGAHT  +   G 
Sbjct: 1   MARRLIGKVACWGNGDYGRLGHDCAKSLAVPSLVPALINQKFLSVACGGAHTAAVAVDGS 60

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  GLND GQLG   +  +S++  +   L +  VQ++ G+ H+  +T    ++  G N 
Sbjct: 61  VFTWGLNDHGQLGHYTHQEFSMQEPQEVFLPEAAVQVAMGHSHTLFLTESSSVWAVGSNM 120

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           +GQLGL ++  +   +P +V+ L G      A G + S+AV+  G++ +WG    G LGH
Sbjct: 121 HGQLGLRRRGGQEW-VPRRVQDLVGTKIIGIAAGAQHSLAVSADGELFTWGGDTRGCLGH 179

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G+ S    F  +  E  PRL+K+L+G+ V+ AA G ++S C+D NG  Y +G       L
Sbjct: 180 GRSS----FAATQDESAPRLVKKLKGIMVQSAAGGLMNSGCVDANGAAYFWGPYLRQSPL 235

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +    A  P ++S +   +++  GG H   LT GG + T+G++E G LG+GS D    P
Sbjct: 236 TKAATEANEPEVLSGVQNVKQLALGGRHLVALTHGGRVATYGTSEYGLLGLGSSD---PP 292

Query: 332 ERVQGPF-SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS---EDGHSSGGQLGH 386
              Q     +  ++QV+ GW+H+A + S+G++LTWGWGGS G+ S    D  S+GGQLGH
Sbjct: 293 SPFQPTLIPDVSLEQVAAGWQHSAGVTSDGQLLTWGWGGSVGSESGLFPDQTSAGGQLGH 352

Query: 387 GNDVDYIHPTIVN 399
            N+ DY  PT  N
Sbjct: 353 DNEFDYWKPTPGN 365


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/402 (37%), Positives = 221/402 (54%), Gaps = 19/402 (4%)

Query: 34  TLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--------ACGGAHTL 84
           +  R F AL  GNGD+GRLG G + +       S+   H ++ L        A GGAH++
Sbjct: 20  STSRAFTALSAGNGDFGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           FL   G V+A GLN++GQLG  ++  +  E   +  L  EVV+++ G +H+  + VDG +
Sbjct: 80  FLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVD-LDVEVVRVAAGNNHTLCVDVDGGV 138

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + +GKN  GQLG G       P   +   L G     A+ G E S+A++   +V SWG  
Sbjct: 139 WAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVAS-GAEHSLALSEDARVYSWGTS 197

Query: 205 GSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G LGHG E+   G+   T++    PRL++ L   KV+  AAG +HSAC+DE G ++ +
Sbjct: 198 ADGVLGHGSETWNEGWFYRTAKTVAKPRLLRALSETKVRSIAAGHMHSACVDERGELFTW 257

Query: 263 GDRAVDKM--LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G    +++    +  +H   P  +  L +  +V CGG HT   TS G + +WG+N++G L
Sbjct: 258 GQGRFNQLGQTSKYVDHETAPKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHGEL 316

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 379
           G GS     S        S     ++S GWKH+A +S +GK+  WG+GGS G+ S++  S
Sbjct: 317 GHGSNSDAKSAIPKPIKLSSRGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLS 376

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           SGGQLG GND DY  PT V    +  A+ VSCGFNHT AL+ 
Sbjct: 377 SGGQLGLGNDFDYWEPTEVWLPGD--AVGVSCGFNHTLALVR 416


>gi|255085030|ref|XP_002504946.1| predicted protein [Micromonas sp. RCC299]
 gi|226520215|gb|ACO66204.1| predicted protein [Micromonas sp. RCC299]
          Length = 526

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 154/408 (37%), Positives = 215/408 (52%), Gaps = 34/408 (8%)

Query: 44  GNGDYGRLGLGSLESRWRP---VVCSAFEKHS-------LKALACGGAHTLFLTETGCVY 93
           GNGD+GRLG G  + R R    +    F++ +       + + + GG+HT  +T  G VY
Sbjct: 121 GNGDFGRLGHGG-DGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTADGAVY 179

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNS 151
             GLN+ GQLG S + GY      +SGL +   VV +S G+HH+  +T  GEL+ WG+N 
Sbjct: 180 TCGLNEHGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWAWGRND 239

Query: 152 NGQLGLGKKAAKVIPIPTKVECLS-------GIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             Q GLG  A  V+P+P  +   S       G     AA G   ++AVT  G V +WG G
Sbjct: 240 ASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAA-GPRHNLAVTDRGAVYTWGDG 298

Query: 205 GSGRLGHG-QESSILGFL-RSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVY 260
             G LGHG  ES   GF  R T+E  PRL++ L  +G++V  AAAG  HS C+D  G V+
Sbjct: 299 KEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRTGHVH 358

Query: 261 IFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            +G    +++     N       P+ +  L    ++  GG     + + G + +WG+N N
Sbjct: 359 AWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRVRDLAAGGNFNVAVGADGSMISWGANGN 418

Query: 318 GCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
           G LG+G+ +      P  V  P + +     S GW+H AA  S+G++ TWGW GS G   
Sbjct: 419 GELGLGNSNDKRGDVPRLVHNP-NAASFASASAGWRHAAATSSDGRLWTWGWSGSVGQHG 477

Query: 375 EDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            D  S+GGQLG  N   D+  PT+V  G   KA  VSCGFNHT A+LE
Sbjct: 478 VDADSTGGQLGLRNGQSDFWEPTLV-VGLPGKAKAVSCGFNHTVAVLE 524



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 45/297 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKH-SLKALACGGAHTLFLTETGCVYA 94
           WG  D  + GLGS      P+          A   H ++ ++A G  H L +T+ G VY 
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294

Query: 95  TGLNDFGQLGISENIGY----------SLEPLRISGLKK---EVVQISTGYHHSSAITVD 141
            G    G LG   +  +             P  +  L     EV   + G  HS  +   
Sbjct: 295 WGDGKEGVLGHGADESWRWGFWGRDTTEPAPRLVRSLADDGIEVASAAAGLCHSVCVDRT 354

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           G ++ WG+    QLG+G K A      PT+V  L  +  +  A G   +VAV   G ++S
Sbjct: 355 GHVHAWGQGRFNQLGVGAKNAPAFTTEPTRVPALGRV--RDLAAGGNFNVAVGADGSMIS 412

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WGA G+G LG G  +   G +       PRL+          A+AG+ H+A    +GR++
Sbjct: 413 WGANGNGELGLGNSNDKRGDV-------PRLVHNPNAASFASASAGWRHAAATSSDGRLW 465

Query: 261 IFG------------DRAVDKMLFQEGNHA-RRPSLISKLP-YSEEVVCGGYHTCVL 303
            +G            D    ++  + G      P+L+  LP  ++ V CG  HT  +
Sbjct: 466 TWGWSGSVGQHGVDADSTGGQLGLRNGQSDFWEPTLVVGLPGKAKAVSCGFNHTVAV 522



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 26/209 (12%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V+S G G  GRLGHG +      L  ++E   R+    +G+ V  A+AG  H+A +  +
Sbjct: 116 RVVSCGNGDFGRLGHGGDGRGRAGLGMSAETFQRMTGIPQGLDVVSASAGGSHTAVVTAD 175

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
           G VY  G       L    +    P L  +S LP  + VV    G +HT  +T GGEL+ 
Sbjct: 176 GAVYTCGLNE-HGQLGHSHDAGYVPILRPVSGLPQHDRVVAVSAGHHHTVCVTEGGELWA 234

Query: 312 WGSNE-NGC-LGIGSIDVLHSPERVQ-----GPFSESPVDQVSCGWKHTAAISE-GKILT 363
           WG N+ + C LG G+  V+  P  +       P +   V  V+ G +H  A+++ G + T
Sbjct: 235 WGRNDASQCGLGSGAPSVVPLPAWISSASPGAPGNHGAVMSVAAGPRHNLAVTDRGAVYT 294

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           WG          DG    G LGHG D  +
Sbjct: 295 WG----------DGKE--GVLGHGADESW 311


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 204/387 (52%), Gaps = 38/387 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    ++ P++  A +      ++CG  HT+ LT+ G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K+V Q++ G +H++A+TV GELY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNEN 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P+ VE + G++ +Q A G   +V +     V +WG   +G  GHG  S      
Sbjct: 125 GH--STPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGVSGHGDTSG----- 177

Query: 222 RSTSEYTPRLIKELEGVKVK-IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y+P  + EL  + +K I+A GF H+A + ENG+V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYSPYCVSELVEINIKQISACGF-HTAALSENGQVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              ++K   +      ++V CGG+HT  +T  G ++TWG  E+G LG G       P RV
Sbjct: 230 NQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRV 289

Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +    ++ + Q++CGW HT A+++ G++ TWG  G H           G+LGH +     
Sbjct: 290 ESLIDKNII-QLTCGWSHTVALTDKGEVFTWG-NGDH-----------GKLGHNDTNKVT 336

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALL 420
            P ++    + + + V+    HT AL+
Sbjct: 337 EPKLIETFNSKRVISVASYNEHTVALV 363



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 178/344 (51%), Gaps = 48/344 (13%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKN 150
           VY  G  + GQLG+ +       P+ +  L+ ++ VQIS G  H+  +T DG++Y WG+ 
Sbjct: 3   VYTWGRGEDGQLGLGDT-SDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRG 61

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            +G+LG G    K +P    VE L     +Q   G   + AVT  G++ +WG G  G+LG
Sbjct: 62  DDGRLGHGDNGWKFVP--RLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLG 119

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG E+            TP L++ ++G+ V+  A G  H+  + EN  VY +GD+  +  
Sbjct: 120 HGNENG---------HSTPSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDK--ENG 168

Query: 271 LFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +   G+   H   P  +S+L     +++   G+HT  L+  G+++T+G  + G LG    
Sbjct: 169 VSGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSENGQVFTFGEGKFGRLG---- 224

Query: 326 DVLHSPERVQGPFSE-------SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
              H+ ER Q P ++         + QV+CG  HTAA++E G + TWG GG HG      
Sbjct: 225 ---HNSERNQ-PVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWG-GGEHG------ 273

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                QLGHG+ V+ I PT V    +   +Q++CG++HT AL +
Sbjct: 274 -----QLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTD 312


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 201/390 (51%), Gaps = 38/390 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV   A  +  +  +ACG  HT+ LT+ G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K + Q++ G +H++A+TV G+LY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P    VE L G+  +Q A G   +V +     V +WG   +G  GHG         
Sbjct: 125 GHSTPFL--VETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P  ++EL G   V+I+A GF H+A + E G V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKNIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +++   +      ++V CGG+HT  +T  GE+YTWG  E+G LG G       P RV
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289

Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +    E  V Q++CGW HT A+++ G++ TWG  G H           G+LGH +     
Sbjct: 290 E-SLVEKLVVQITCGWSHTVALTDTGEVYTWG-NGDH-----------GKLGHNDTTKVT 336

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            P +V+  E  + + V+    HT AL++ V
Sbjct: 337 LPKLVDVLEGKRVISVASYNEHTVALVDPV 366



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 146/333 (43%), Gaps = 78/333 (23%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG+  +GQLGLG  + +  P+P  ++ L+     Q A G   +V +T  G+V +WG 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTDEGEVYTWGR 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             ++ PRL++EL G  ++    G  H+A +  +G +Y +G
Sbjct: 61  GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                K+          P L+  L      +V CG  HT VL    ++YTWG  ENG  G
Sbjct: 112 GGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171

Query: 322 IGSID----------------------------------------------VLHSPERVQ 335
            G  +                                              + H+ ER Q
Sbjct: 172 HGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231

Query: 336 --GPFSES----PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
               F E+     V QV+CG  HTAA++E G++ TWG GG H           GQLGHG+
Sbjct: 232 PVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            V+   PT V        +Q++CG++HT AL +
Sbjct: 280 KVNKTVPTRVESLVEKLVVQITCGWSHTVALTD 312


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/390 (33%), Positives = 198/390 (50%), Gaps = 38/390 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV   A  +  +  +ACG  HT+ LTE G VY  G  D G+
Sbjct: 6   WGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGDDGR 65

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ K + Q++ G +H++A+TV G+LY WG    G+LG G + 
Sbjct: 66  LGHGDN-GWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNET 124

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  VE L  +  +Q A G   +V +     V +WG   +G  GHG         
Sbjct: 125 GH--STPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG----- 177

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P  ++EL G   V+I+A GF H+A + E G V+ FG+    ++    G+++ R
Sbjct: 178 ---HQYLPCPVEELRGKSIVQISACGF-HTAALSEFGEVFTFGEGKFGRL----GHNSER 229

Query: 281 PSLISKLPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +++   +      ++V CGG+HT  +T  GE+YTWG  E+G LG G       P RV
Sbjct: 230 NQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRV 289

Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +    E  V Q++CGW HT  +++ G++ TWG  G H           G+LGH +     
Sbjct: 290 ESLL-EKLVLQITCGWSHTVTLTDTGEVYTWG-NGDH-----------GKLGHNDTAKVT 336

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            P  V+  +  + + V+    HT AL++ V
Sbjct: 337 LPKPVDVLDGKRVISVASYNEHTVALVDPV 366



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 144/333 (43%), Gaps = 78/333 (23%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG+  +GQLGLG  + +  P+P  ++ L+     Q A G   +V +T  G+V +WG 
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVP--IDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             ++ PRL++EL G  ++    G  H+A +  +G +Y +G
Sbjct: 61  GDDGRLGHGDNG---------WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                K+          P L+  L   +  +V CG  HT VL    ++YTWG  ENG  G
Sbjct: 112 GGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSG 171

Query: 322 IGSID----------------------------------------------VLHSPERVQ 335
            G  +                                              + H+ ER Q
Sbjct: 172 HGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSERNQ 231

Query: 336 ------GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
                    +   V QV+CG  HTAA++E G++ TWG GG H           GQLGHG+
Sbjct: 232 PVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWG-GGEH-----------GQLGHGD 279

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            V+   PT V        LQ++CG++HT  L +
Sbjct: 280 KVNKTVPTRVESLLEKLVLQITCGWSHTVTLTD 312


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 185/363 (50%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P+V SA +   + ++ CG  HT   +E T  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   +    + P  I GLK  E+ QI+ G  H  AIT DGE++ WG+N NGQLGLG  
Sbjct: 98  RLGHGNSSDLFI-PRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGH- 155

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + + +P KV    GI  K  A G E + AVT  GK+  WG G  G LG G  +  L  
Sbjct: 156 -TEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRL-- 212

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G K+ + A G+ H+  +  +G +Y FG     ++   +      
Sbjct: 213 -------VPGEVAAVPGEKMNLVACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLV 265

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L     + V GG+ HT  L   GELY WG N+ G +G G+ D  +SP+ + G  
Sbjct: 266 PHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIV 325

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
           +E  V +V+CGW+HT AI++ G + +WG G S            GQLGHG+ VD   P  
Sbjct: 326 NEK-VTRVTCGWRHTVAITDRGNVYSWGRGTS------------GQLGHGDAVDRCVPKR 372

Query: 398 VNF 400
           +  
Sbjct: 373 IEL 375



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 177/364 (48%), Gaps = 30/364 (8%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
             CS   +  + +++ G +HT+ L     V + G  + GQLG  +     L PL IS L 
Sbjct: 6   AACSGGPRRRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHL-PLVISALD 64

Query: 123 K-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
             E+  I+ G  H++A +     +Y WG    G+LG G  +   + IP  ++ L G+  K
Sbjct: 65  DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSD--LFIPRAIKGLKGLEIK 122

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q A G    +A+TG G+V SWG   +G+LG G    +L          P  +   EG+ V
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL---------VPNKVAAFEGIAV 173

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGY 298
           K+ AAG  H+A + E+G++Y +G      +   + N    P  ++ +P  +   V CG  
Sbjct: 174 KMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWR 233

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT  + + G LYT+G ++ G LG G  +    P +VQ       +  VS GW+HT A+ E
Sbjct: 234 HTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQA-LKNKTIQAVSGGWRHTVALDE 292

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            G++  WGW            +  GQ+G GN  D+  P ++    N K  +V+CG+ HT 
Sbjct: 293 DGELYGWGW------------NKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTV 340

Query: 418 ALLE 421
           A+ +
Sbjct: 341 AITD 344



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 2/128 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +  +++A++ G  HT+ L E G +Y  G N FGQ+G   
Sbjct: 252 YGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGN 311

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              ++   L    + ++V +++ G+ H+ AIT  G +Y WG+ ++GQLG G    +   +
Sbjct: 312 TDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRC--V 369

Query: 168 PTKVECLS 175
           P ++E LS
Sbjct: 370 PKRIELLS 377


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 127/363 (34%), Positives = 180/363 (49%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P + SA +   + ++ CG  HT  L+  T  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   +    + P  I  LK  EV QI+ G  H  AIT DGE+  WG+N NGQLGLG  
Sbjct: 98  RLGHGNSSDLFI-PQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGH- 155

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P K+    G+  K  A G E + AVT  GK+  WG G  G LG G     L  
Sbjct: 156 -TEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRL-- 212

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G  +K+ A G+ H+ C+ E+G +Y FG     ++   +      
Sbjct: 213 -------VPDQVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLI 265

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L   + + + GG+ HT  L S G LY WG N+ G +G G+ +   SP+ V+G  
Sbjct: 266 PHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG-L 324

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V  V CGW+HT A+++ G + +WG G S            GQLGHG+ VD   P  
Sbjct: 325 QDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTS------------GQLGHGDTVDRSTPKR 372

Query: 398 VNF 400
           +  
Sbjct: 373 IEI 375



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 167/357 (46%), Gaps = 30/357 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQI 128
           +  + AL+ G +H++ L     V + G  + GQLG  +       P  +S L   E+  +
Sbjct: 13  RRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHF-PTIVSALDDCEISSV 71

Query: 129 STGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           + G  H++A++   + +Y WG    G+LG G  +   IP P K   L G+  KQ A G  
Sbjct: 72  TCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKA--LKGLEVKQIACGDS 129

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
             +A+T  G+VL WG   +G+LG G    +L         TP  +   EGV VK+ AAG 
Sbjct: 130 HCLAITTDGEVLGWGRNQNGQLGLGHTEDVL---------TPHKLTAFEGVAVKMLAAGA 180

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTS 305
            H+  + ENG++Y +G      +   +      P  ++ +     + V CG  HT  +  
Sbjct: 181 EHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAE 240

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 364
            G +YT+G ++ G LG G       P +VQ       +  ++ GW+HT A+ S+G++  W
Sbjct: 241 SGNMYTFGWSKYGQLGHGDFADHLIPHQVQA-LKSKKIQAITGGWRHTFALDSDGRLYGW 299

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GW            +  GQ+G GN  D   P +V   ++     V CG+ HT A+ +
Sbjct: 300 GW------------NKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTD 344



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 142/304 (46%), Gaps = 28/304 (9%)

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           G++++V+ +S G  HS A+     +  WG+  +GQLG G   A+    PT V  L     
Sbjct: 11  GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGD--AEERHFPTIVSALDDCEI 68

Query: 180 KQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
                G + + A++   K V SWG G  GRLGHG  S +         + P+ IK L+G+
Sbjct: 69  SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDL---------FIPQPIKALKGL 119

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCG 296
           +VK  A G  H   I  +G V  +G     ++          P  ++       + +  G
Sbjct: 120 EVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAG 179

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT  +T  G+LY WG    G LG+G  +    P++V     E  +  V+CGW+HT  +
Sbjct: 180 AEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGE-LMKMVACGWRHTICV 238

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +E G + T+GW            S  GQLGHG+  D++ P  V   ++ K   ++ G+ H
Sbjct: 239 AESGNMYTFGW------------SKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRH 286

Query: 416 TGAL 419
           T AL
Sbjct: 287 TFAL 290



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 4/129 (3%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G       P    A +   ++A+  G  HT  L   G +Y  G N FGQ+G   
Sbjct: 252 YGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCG- 310

Query: 108 NIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N      P  + GL+ +VV +   G+ H+ A+T  G +Y WG+ ++GQLG G    +   
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR--S 368

Query: 167 IPTKVECLS 175
            P ++E LS
Sbjct: 369 TPKRIEILS 377


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 189/365 (51%), Gaps = 34/365 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT   +E+   VY+ G  DFG
Sbjct: 40  WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFG 99

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + GL+  + QI+ G  H  A+T+DGE+  WG+N NGQLGLG 
Sbjct: 100 RLGHGNSSDLFTPQPIKALHGLR--IKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGT 157

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L 
Sbjct: 158 TEDSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL- 214

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  +EGVK+   A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 215 --------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHL 266

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQG 336
            P  +  L  +   E+  G  HT  LTS G+LY WG N+ G +G+G  +V H SP +V+ 
Sbjct: 267 TPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKF 325

Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P  E  V  +SCGW+HT A++E + + +WG G            + GQLGHG  +D   P
Sbjct: 326 PH-EQKVVHISCGWRHTLAVTERQNVFSWGRG------------TNGQLGHGESIDRNIP 372

Query: 396 TIVNF 400
            ++  
Sbjct: 373 KMIEV 377



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 177/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P  +S L   EVV ++ G  H
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAED-RLSPTYLSALDGHEVVSVTCGADH 79

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +    ++Y WG    G+LG G  +    P P K   L G+  KQ A G    +AVT
Sbjct: 80  TTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIK--ALHGLRIKQIACGDSHCLAVT 137

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV VK+ AAG  H+A +
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAV 188

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +  +V CG  HT  ++S G LYT
Sbjct: 189 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 248

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G  +   +P +++    E+ + ++S GW+HT A+ S+GK+  WGW    
Sbjct: 249 YGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYGWGW---- 303

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G++VD+  P  V F    K + +SCG+ HT A+ E
Sbjct: 304 --------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTE 346



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 4/129 (3%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +++ +  ++ G  HT+ LT  G +Y  G N FGQ+G+ +
Sbjct: 254 YGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD 313

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+++    +++VV IS G+ H+ A+T    ++ WG+ +NGQLG G+   +   
Sbjct: 314 NVDH-CSPVQVKFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDR--N 370

Query: 167 IPTKVECLS 175
           IP  +E LS
Sbjct: 371 IPKMIEVLS 379


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+  ++ ++ CG  HT   +E    VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P++ + GLK  + QI+ G  H  A+T+ GE+  WG+N NGQLGLG
Sbjct: 97  RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLG 153

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++    +  K  A G E + AVT  G +  WG G  G LG G  +  L
Sbjct: 154 TTEDSL--LPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 211

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +    
Sbjct: 212 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 262

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  
Sbjct: 263 LVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSF 322

Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P  +  + QV+CGW+HT A+SE K + +WG G S            GQLG+G  VD   P
Sbjct: 323 P-EDQKISQVACGWRHTLALSEKKNVFSWGRGTS------------GQLGNGEIVDRNTP 369

Query: 396 TIVN 399
            +++
Sbjct: 370 VLID 373



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 178/352 (50%), Gaps = 32/352 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-AEDRLVPTVLSGFDAPAITSVICGADH 76

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P  V+ L G+  KQ A G    +AVT
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGLKIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  E V VK+ AAG  H+A 
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHTAA 184

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +V+    +S + Q+S GW+HT A+ SEGK+  WGW   
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTSEGKLYGWGW--- 300

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +  GQ+G GN+ D+  P  V+F E+ K  QV+CG+ HT AL E
Sbjct: 301 ---------NKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSE 343


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 189/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFG 97

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P++ + GLK  + QI+ G  H  A+T+ G++  WG+N NGQLGLG
Sbjct: 98  RLGHGNSSDV-FTPQPVKALQGLK--IKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLG 154

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++   G+  K  A G E + AVT  G +  WG G  G LG G  +  L
Sbjct: 155 TTEDSL--LPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL 212

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +    
Sbjct: 213 ---------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH 263

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  
Sbjct: 264 LVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHF 323

Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P  +  + QV+CGW+HT A+SE K + +WG G S            GQLG+G  VD   P
Sbjct: 324 P-EDQKISQVACGWRHTLALSEKKNVFSWGRGTS------------GQLGNGEIVDRNTP 370

Query: 396 TIVN 399
            +++
Sbjct: 371 VLID 374



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 179/352 (50%), Gaps = 32/352 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 19  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGD-AEDRLVPTVLSGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P  V+ L G+  KQ A G    +AVT
Sbjct: 78  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGLKIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  EGV VK+ AAG  H+A 
Sbjct: 136 MAGQVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGVCVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 186 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +++    +S + Q+S GW+HT A+ SEGK+  WGW   
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSTISQISGGWRHTMALTSEGKLYGWGW--- 301

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +  GQ+G GN+ D+  P  V+F E+ K  QV+CG+ HT AL E
Sbjct: 302 ---------NKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLALSE 344



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 26/265 (9%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ +  G+C + I++  +   A         WG G YG LGLG    R  P   S+ E  
Sbjct: 164 KIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGE 223

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
            +  +ACG  HT+ ++++G +Y  G + +GQLG  +   + L P ++  LK   + QIS 
Sbjct: 224 KMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSTISQISG 282

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T +G+LY WG N  GQ+G+G       P+  +V         Q A G+  ++
Sbjct: 283 GWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPV--QVHFPEDQKISQVACGWRHTL 340

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVK----IAA 244
           A++    V SWG G SG+LG+G+              TP LI  L  +G   K      A
Sbjct: 341 ALSEKKNVFSWGRGTSGQLGNGE---------IVDRNTPVLIDALSTDGSGCKKLESSTA 391

Query: 245 AGFLHSACIDENGRVYIFGDRAVDK 269
           A F     +  + R  I  D  V K
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPK 416


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/363 (33%), Positives = 181/363 (49%), Gaps = 32/363 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++   GI  K  A G E + AVT  G +  WG G  G LG G  +    
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   S   + GG+ HT  LTS G+LY WG N+ G +G G      SP +V  P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324

Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
             E  V QV+CGW+HT A +E K +  WG G S            GQLGHG  VD   P 
Sbjct: 325 -EEQKVAQVACGWRHTLAFTEKKNVFAWGRGTS------------GQLGHGEIVDRNTPV 371

Query: 397 IVN 399
           I++
Sbjct: 372 IID 374



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 176/352 (50%), Gaps = 32/352 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     +   G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAED-RLVPTVISGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G       P P  V+ L GI  KQ A G    +AVT
Sbjct: 78  TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP--VKALQGIKIKQLACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+VLSWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +V+    +S   Q+S GW+HT A+ S+GK+  WGW   
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGW--- 301

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +  GQ+G G++ D+  P  VNF E  K  QV+CG+ HT A  E
Sbjct: 302 ---------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTE 344



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 17/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +K LACG +H L +T  G V + G N  GQ
Sbjct: 91  WGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      SL P  I   +   V  I+ G  H++A+T DG++Y WG    G LGLG + 
Sbjct: 151 LGLG-TTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P KV  + G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 210 DRF--VPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 264

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+       + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 265 ------VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSP 318

Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           + ++  P  +   +V CG  HT   T    ++ WG   +G LG G I   ++P  +    
Sbjct: 319 AQVN-FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALS 377

Query: 339 SESP 342
            + P
Sbjct: 378 PDGP 381


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 28  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 88  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 256 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 362

Query: 398 V 398
           +
Sbjct: 363 I 363



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 67

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 237 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGW---- 291

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 292 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 334


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 28  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 87

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 88  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 146

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 147 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 198

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 199 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 255

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 256 PHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 314

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 315 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 362

Query: 398 V 398
           +
Sbjct: 363 I 363



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 176/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 67

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 177 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S G++HT A+ S+GK+  WGW    
Sbjct: 237 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGFRHTMALTSDGKLYGWGW---- 291

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 292 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 334


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 40  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 99

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 100 RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 158

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 159 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 210

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 211 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 267

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 268 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 326

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 327 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 374

Query: 398 V 398
           +
Sbjct: 375 I 375



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 79

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 137

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 188

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 189 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 248

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 249 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGW---- 303

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 304 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 346


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 373

Query: 398 V 398
           +
Sbjct: 374 I 374



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 176/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGW---- 302

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 303 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 130/367 (35%), Positives = 184/367 (50%), Gaps = 32/367 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVY 93
           L    A  WG G+ G+LG G  E R +P       + S  A+  G  +++ L++    VY
Sbjct: 30  LSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVY 89

Query: 94  ATGLNDFGQLGISE-NIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           + G  DFG+LG  + N  +  +P+R ++G  + +V+++ G  H+ A+T  GEL+ +G+N 
Sbjct: 90  SWGWGDFGRLGHGDCNDVFIPQPIRALAG--RNIVKVACGDTHTLAVTDTGELFSFGRNQ 147

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           NGQLGLG  +  ++P P  VE L G      A G E S+A T  G V +WG G  G LG 
Sbjct: 148 NGQLGLGTTSDAILPQP--VESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGV 205

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G              + P  +  LEGVKV   A G+ HS   DE G VY FG     ++ 
Sbjct: 206 GPPED---------RHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLG 256

Query: 272 FQEGNHARRPSLISKLPYSEEV-VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +      P  +  L  S  V + GG+ HT      G+LY+WG N+ G LGIGS    +
Sbjct: 257 HGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSN 316

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           +P  VQG  + SPV  +SCGW+HT A++E G + +WG G              GQLGH  
Sbjct: 317 APVPVQG-LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRG------------VNGQLGHNE 363

Query: 389 DVDYIHP 395
             D   P
Sbjct: 364 PKDTNAP 370



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 146/295 (49%), Gaps = 15/295 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G     + P    A    ++  +ACG  HTL +T+TG +++ G N  GQ
Sbjct: 91  WGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      ++ P  +  L+ +EV  I+ G  HS A T  G+++ WG    G LG+G   
Sbjct: 151 LGLG-TTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPE 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P++V  L G+     A G+  S+A    G V ++G    G+LGHG         
Sbjct: 210 DRH--LPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKYGQLGHGD-------- 259

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               +  P+ ++ L+  ++ + A G+ H++  D++G++Y +G     ++       +  P
Sbjct: 260 -CIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAP 318

Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +  L  S  + + CG  HT  +T  G++++WG   NG LG       ++P R+
Sbjct: 319 VPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRL 373



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 138/299 (46%), Gaps = 28/299 (9%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            V  +S G  HS A+  +G    WG+  +GQLG G   A+    P  +  L         
Sbjct: 15  RVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD--AEERKKPRAIFHLMQASCSAVC 72

Query: 184 LGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            G E SVA++    +V SWG G  GRLGHG  + +         + P+ I+ L G  +  
Sbjct: 73  SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDV---------FIPQPIRALAGRNIVK 123

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
            A G  H+  + + G ++ FG     ++     + A  P  +  L   E   + CGG H+
Sbjct: 124 VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS 183

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
              TS G+++ WG    G LG+G  +  H P +V G      V  V+CGW+H+ A  E G
Sbjct: 184 LAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHG-LEGVKVTSVACGWRHSIAADETG 242

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            + T+GW            S  GQLGHG+ +D + P  V   ++ + + ++ G+ HT A
Sbjct: 243 AVYTFGW------------SKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSA 289



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 109/253 (43%), Gaps = 26/253 (10%)

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            +S +     + G   S+A+   G  LSWG G  G+LGHG          +     PR I
Sbjct: 10  AVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGD---------AEERKKPRAI 60

Query: 233 KELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
             L         +G  +S  + +    VY +G     ++   + N    P  I  L    
Sbjct: 61  FHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRN 120

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             +V CG  HT  +T  GEL+++G N+NG LG+G+      P+ V+       V  ++CG
Sbjct: 121 IVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVES-LRGQEVTSIACG 179

Query: 350 WKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
            +H+ AA S G +  WGWG              G LG G   D   P+ V+  E VK   
Sbjct: 180 GEHSLAATSAGDVFAWGWG------------RYGNLGVGPPEDRHLPSQVHGLEGVKVTS 227

Query: 409 VSCGFNHTGALLE 421
           V+CG+ H+ A  E
Sbjct: 228 VACGWRHSIAADE 240


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 158 EDSL--VPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 210 ---TDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 373

Query: 398 V 398
           +
Sbjct: 374 I 374



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 175/351 (49%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIPIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGW---- 302

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 303 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 178/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +  L  
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 325

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 373

Query: 398 V 398
           +
Sbjct: 374 I 374



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 177/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 248 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGW---- 302

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 303 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 345


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 199/383 (51%), Gaps = 51/383 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ CG  HTL  +E+   VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFG 98

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   +  +P+R + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 99  RLGHGNSSDLFIPQPIRALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 156

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 157 TEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND--- 211

Query: 220 FLRSTSEYTPRLIKELEGV---KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                     R I E   V   K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 212 ----------RCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDCK 261

Query: 277 HARRPSLISKLPYSEEVVC---GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
               P  +    +S++++C   GG+ HT  LT+GG+LY WG N+ G +G+G      SP 
Sbjct: 262 DHLVPHKLQA--FSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPV 319

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +V+ P  +  V Q+SCGW+HT A++E   + +WG G            + GQLG G+ +D
Sbjct: 320 QVKFPHDQK-VAQISCGWRHTIAVTEKDNVYSWGRG------------TNGQLGIGDTID 366

Query: 392 YIHPTIVNFGENVKALQV--SCG 412
           + +P I      ++AL V  SCG
Sbjct: 367 WNYPKI------IEALSVDGSCG 383



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 174/350 (49%), Gaps = 29/350 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ GG+H++ L     V + G  + GQLG  +     L P ++S L  +++V +  G  H
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDT-DDRLLPTQLSALDAQQIVSVVCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +   IP P  +  L G+  KQ A G    +AVT
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQP--IRALQGLRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  HS  I
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQTFQGVPIKMVAAGAEHSVAI 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVCGGYHTCVLTSGGELYTW 312
            ENG +Y +G      +   + N    P  +S        V CG  HT  ++S GELYT+
Sbjct: 188 TENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVLVACGWRHTISVSSSGELYTY 247

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHG 371
           G ++ G LG G       P ++Q  FS+  + QVS GW+HT A++ G ++  WGW     
Sbjct: 248 GWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGW----- 301

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  +  GQ+G G++VD   P  V F  + K  Q+SCG+ HT A+ E
Sbjct: 302 -------NKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTE 344


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 185/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT  +  E   VY+ G  DFG
Sbjct: 45  WGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFG 104

Query: 102 QL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +L  G S ++ ++ +P+R + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG
Sbjct: 105 RLGHGNSSDV-FTPQPVRALQGIK--IKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLG 161

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +   
Sbjct: 162 TTEDSL--LPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN--- 216

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +    
Sbjct: 217 ------DRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH 270

Query: 279 RRPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L   S   + GG+ HT  LTS G+LY WG N+ G +G G      SP +V  
Sbjct: 271 LFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMF 330

Query: 337 PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P +E  V QV+CGW+HT A +E K +  WG G S            GQLGHG  VD   P
Sbjct: 331 P-AEQKVAQVACGWRHTLAYTEKKNVFAWGRGTS------------GQLGHGEIVDRNKP 377

Query: 396 TIVN 399
            +++
Sbjct: 378 LMID 381



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 176/352 (50%), Gaps = 32/352 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L E   + + G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAED-RLVPTVISGFDAPRITSVICGADH 84

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + +  ++Y WG    G+LG G  +    P P  V  L GI  KQ A G    +AVT
Sbjct: 85  TTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQP--VRALQGIKIKQMACGDSHCLAVT 142

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            GG+V SWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFEGICVKMIAAGAEHTAA 192

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 193 VTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGILY 252

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +V+    +S   Q+S GW+HT A+ S+GK+  WGW   
Sbjct: 253 TYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGW--- 308

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +  GQ+G G+ VD+  P  V F    K  QV+CG+ HT A  E
Sbjct: 309 ---------NKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTE 351



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 102/203 (50%), Gaps = 11/203 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ +  GIC + I++  +   A         WG G YG LGLG    R+ P   S  E  
Sbjct: 171 KIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGE 230

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
            +  +ACG  HT+ ++ +G +Y  G + +GQLG  +   + L P ++  LK     QIS 
Sbjct: 231 KMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDH-LFPHKVEALKDSSTSQISG 289

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T DG+LY WG N  GQ+G G       P+         +   Q A G+  ++
Sbjct: 290 GWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKV--AQVACGWRHTL 347

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
           A T    V +WG G SG+LGHG+
Sbjct: 348 AYTEKKNVFAWGRGTSGQLGHGE 370



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 4/151 (2%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E    P    A +  S   ++ G  HT+ LT  G +Y  G N FGQ+G  +
Sbjct: 259 YGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGD 318

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           ++ +      +   +++V Q++ G+ H+ A T    ++ WG+ ++GQLG G+   +  P+
Sbjct: 319 SVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPL 378

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
                   G  +K+     E S AV    KV
Sbjct: 379 MIDAISPDGSGSKK----LESSTAVPFTAKV 405


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 176/357 (49%), Gaps = 29/357 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
           G G+ G+LG G  E R  P +  A     +  +ACG  HT   + T   +Y+ G  DFG+
Sbjct: 30  GRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N      P  I  L+  E+ QI+ G  H  A+T DGE+Y WG+N NGQLGLG   
Sbjct: 90  LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             ++P   K+    G+  K  A G E + AVT GGK+  WG G  G LG G     +   
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRM--- 203

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +   K+ + A G+ H+  + ++G++Y +G     ++   +      P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             ++ L  ++   V GG+ HT  LT  G+LY WG N+ G +G G +D   SP+ +  P  
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 340 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              V QVSCGW+HT A+++   + +WG G S            GQLGHG+ VD   P
Sbjct: 318 HQRVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVDRSAP 362



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 172/360 (47%), Gaps = 47/360 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  I  L   E+  ++ G  H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHL-PRIIGALNDCEISLVACGADH 68

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +     +Y WG    G+LG G  +   +P P K   L G+  +Q A G    +AVT
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P  +   EGV VK+ AAG  H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177

Query: 254 DENGRVYIFG----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            + G++Y +G          DR  D+ML  E        +         V CG  HT  +
Sbjct: 178 TDGGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCM-------VACGWRHTIAV 229

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
           +  G+LYT+G ++ G LG G       P +V    +E  + QVS GW+HT A++E GK+ 
Sbjct: 230 SQSGKLYTYGWSKYGQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLY 288

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 421
            WGW            +  GQ+G G+  D+  P +++  G++ + +QVSCG+ HT A+ +
Sbjct: 289 GWGW------------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD 336



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   ++ +ACG +H L +T  G VY+ G N  GQ
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    SL P ++   +   V  ++ G  H++A+T  G+LY WG    G LGLG + 
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRG 200

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +++P   +V  +        A G+  ++AV+  GK+ ++G    G+LGHG  +  L   
Sbjct: 201 DRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L    +   + G+ H+  + E G++Y +G     ++   + +    P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            LIS     + VV   CG  HT  +T    +Y+WG   +G LG G      +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 141/304 (46%), Gaps = 28/304 (9%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +++V+ +S G  H+ A+     +  +G+  +GQLG G   A+   +P  +  L+      
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGD--AEDRHLPRIIGALNDCEISL 61

Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + + A +     + SWG G  GRLGHG  S +         + P  IK L+G+++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL---------FVPHPIKALQGLEI 112

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
           +  A G  H   +  +G VY +G     ++   + + +  P  +        + +  G  
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAE 172

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT  +T GG+LY WG    G LG+G       P  V     +  +  V+CGW+HT A+S+
Sbjct: 173 HTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPA-VGDEKMCMVACGWRHTIAVSQ 231

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            GK+ T+GW            S  GQLGHG+  D++ P  V         QVS G+ HT 
Sbjct: 232 SGKLYTYGW------------SKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTV 279

Query: 418 ALLE 421
           AL E
Sbjct: 280 ALTE 283


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 174/361 (48%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +++G  VY+ G  DFG
Sbjct: 30  WGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFG 89

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T +GE+  WG+N NGQLGLG  
Sbjct: 90  RLG-HGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDT 148

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G        
Sbjct: 149 EDSL--VPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDR------ 200

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T    P  +    G K    A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 201 ---TDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLI 257

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 258 PHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFP- 316

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  VD   P I
Sbjct: 317 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESVDRNFPKI 364

Query: 398 V 398
           +
Sbjct: 365 I 365



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 174/351 (49%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   ++V ++ G  H
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRP-SPTQLSALDGHQIVSVTCGADH 69

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 70  TVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 127

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K  AAG  H+A +
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKXVAAGAEHTAAV 178

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   +      P  ++         V CG  HT  ++  G LYT
Sbjct: 179 TEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGALYT 238

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++   S S + Q+S G +HT A+ S+GK+  WGW    
Sbjct: 239 YGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGARHTXALTSDGKLYGWGW---- 293

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V F ++ K +QVSCG+ HT A+ E
Sbjct: 294 --------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTE 336


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 177/361 (49%), Gaps = 30/361 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT+  +E+   VY+ G  DFG
Sbjct: 39  WGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFG 98

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L    + QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 99  RLGHG-NSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDT 157

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  WG G  G LG G  +  L  
Sbjct: 158 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL-- 213

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 214 -------VPERVTSAGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLV 266

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+     SP +V+ P 
Sbjct: 267 PHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIP- 325

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            +  V QVSCGW+HT A++E   +  WG G            + GQLG G  +D   P I
Sbjct: 326 DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESLDRNFPKI 373

Query: 398 V 398
           +
Sbjct: 374 I 374



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 175/351 (49%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L   ++V ++ G  H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDDHQIVSVTCGADH 78

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +    P+P K   L GI  KQ A G    +AVT
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIK--ALHGIRIKQIACGDSHCLAVT 136

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 187

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  ++         V CG  HT  ++  G LYT
Sbjct: 188 TEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGALYT 247

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G ++    P +++     S + Q+S GW+HT A+ S+GK+  WGW    
Sbjct: 248 YGWSKYGQLGHGDLEDHLVPHKLEA-LGNSVISQISGGWRHTMALTSDGKLYGWGW---- 302

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G GN++D   P  V   ++ K +QVSCG+ HT A+ E
Sbjct: 303 --------NKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTE 345



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G+G+   +  PV     +   +  ++CG  HTL +TE   V+A G    GQ
Sbjct: 300 WGWNKFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 359

Query: 103 LGISENIGYS----LEPLRISGLKKEVVQIST 130
           LGI E++  +    +E L + G   + ++ S 
Sbjct: 360 LGIGESLDRNFPKIIEALSVDGASGQHIESSN 391


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 187/366 (51%), Gaps = 36/366 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTET-GCVYATGLND 99
           WG G+ G+LG G  E R  P V S F+  +  + ++ CG  HT   +E    VY+ G  D
Sbjct: 46  WGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGD 105

Query: 100 FGQL--GISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           FG+L  G S ++ ++ +P++ + G+K  + QI+ G  H  A+T+ GE+  WG+N NGQLG
Sbjct: 106 FGRLGHGNSSDV-FTPQPVKALQGIK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLG 162

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     +  +P K++   G+  K  A G E + AVT  G +  WG G  G LG G  + 
Sbjct: 163 LGTTEDSL--LPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            L          P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 221 RL---------VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFE 271

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G  D    P +V
Sbjct: 272 DHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQV 331

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           + P  +  V QV+CGW+HT A +E K + +WG G S            GQLGHG  VD  
Sbjct: 332 KFP-EDQKVAQVACGWRHTLAFTEKKNVFSWGRGTS------------GQLGHGEIVDRN 378

Query: 394 HPTIVN 399
            P +++
Sbjct: 379 KPVMID 384



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 178/354 (50%), Gaps = 34/354 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST---GY 132
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG       I++   G 
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAAAPGITSVICGA 85

Query: 133 HHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            H++A + D  ++Y WG    G+LG G  +    P P  V+ L GI  KQ A G    +A
Sbjct: 86  DHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQP--VKALQGIKIKQIACGDSHCLA 143

Query: 192 VTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           VT  G+V SWG   +G+LG G  E S+L          P+ I+  EGV VK+ AAG  H+
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQSFEGVCVKMIAAGAEHT 193

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGE 308
           A + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G 
Sbjct: 194 AAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSSGS 253

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           LYT+G ++ G LG G  +    P +++    +S + Q+S GW+HT A+ S+GK+  WGW 
Sbjct: 254 LYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTSDGKLYGWGW- 311

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                      +  GQ+G G+  D+  P  V F E+ K  QV+CG+ HT A  E
Sbjct: 312 -----------NKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTE 354



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 144/304 (47%), Gaps = 17/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQ 160

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+      SL P +I   +   V+ I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 161 LGLG-TTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRN 219

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P KV  + G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 220 DRL--VPEKVSSVEGEKMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL--- 274

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   + +    P
Sbjct: 275 ------VPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFP 328

Query: 282 SLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + K P  +   +V CG  HT   T    +++WG   +G LG G I   + P  +    
Sbjct: 329 VQV-KFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387

Query: 339 SESP 342
            + P
Sbjct: 388 PDGP 391



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/203 (34%), Positives = 105/203 (51%), Gaps = 11/203 (5%)

Query: 19  KLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKH 71
           K+ S  G+C + I++  +   A         WG G YG LGLG    R  P   S+ E  
Sbjct: 174 KIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGE 233

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIST 130
            +  +ACG  HT+ ++ +G +Y  G + +GQLG  +   + L P ++  LK   + QIS 
Sbjct: 234 KMVLIACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDH-LVPHKLEALKDSSISQISG 292

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+ H+ A+T DG+LY WG N  GQ+G+G       P+  K      +   Q A G+  ++
Sbjct: 293 GWRHTMALTSDGKLYGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKV--AQVACGWRHTL 350

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQ 213
           A T    V SWG G SG+LGHG+
Sbjct: 351 AFTEKKNVFSWGRGTSGQLGHGE 373


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 36/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +   G +Y +G     ++    F++  
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G LY WG N+ G +G+G      SP +V+
Sbjct: 264 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK 321

Query: 336 GPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            P  +  V Q+SCGW+HT A++E + + +WG G            + GQLGHG+ VD   
Sbjct: 322 FPHDQKVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTVDRNS 368

Query: 395 PTIV 398
           P I+
Sbjct: 369 PKII 372



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 177/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  +S L  +++  I+ G  H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G          S     P+ I+  +GV +K+ AAG  HS  I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G+ +    P+++Q   S+  + QVS GW+H+ A+ S G +  WGW    
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW---- 300

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G++VD   P  V F  + K +Q+SCG+ HT A+ E
Sbjct: 301 --------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 162/332 (48%), Gaps = 34/332 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+  SE+   SL P +I   +   ++ ++ G  HS AIT +GELY WG    G LGLG 
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
           +  +   IP KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P+ ++ L    +   + G+ HS  +   G +Y +G     ++    G++ 
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312

Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            R S +  K P+ ++VV   CG  HT  +T    +++WG   NG LG G     +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372

Query: 335 Q--------GPFSESPVDQVSCGWKHTAAISE 358
           +        GP  ES    +  G K  A++SE
Sbjct: 373 EALSVDGSSGPHIESSNTDLLSG-KSGASLSE 403


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 36/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHTLAYSESRNELYSWGWGDFG 96

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 155 SEDSL--VPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +   G +Y +G     ++    F++  
Sbjct: 209 -----DRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSL 263

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G LY WG N+ G +G+G      SP +V+
Sbjct: 264 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVK 321

Query: 336 GPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            P  +  V Q+SCGW+HT A++E + + +WG G            + GQLGHG+ VD   
Sbjct: 322 FPHDQKVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTVDRNS 368

Query: 395 PTIV 398
           P I+
Sbjct: 369 PKII 372



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 177/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  +S L  +++  I+ G  H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDT-DDRLLPTHLSALDAQQIDSIACGADH 76

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G          S     P+ I+  +GV +K+ AAG  HS  I
Sbjct: 135 MEGEVQSWGRNQNGQLGLGT---------SEDSLVPQKIQTFQGVPIKMVAAGAEHSVAI 185

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 186 TENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYT 245

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G+ +    P+++Q   S+  + QVS GW+H+ A+ S G +  WGW    
Sbjct: 246 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYGWGW---- 300

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G++VD   P  V F  + K +Q+SCG+ HT A+ E
Sbjct: 301 --------NKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAVTE 343



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 150/301 (49%), Gaps = 25/301 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 90  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 103 LGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+  SE+   SL P +I   +   ++ ++ G  HS AIT +GELY WG    G LGLG 
Sbjct: 150 LGLGTSED---SLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGD 206

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSIL 218
           +  +   IP KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++
Sbjct: 207 RNDRW--IPEKVSSVDCDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLV 264

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P+ ++ L    +   + G+ HS  +   G +Y +G     ++    G++ 
Sbjct: 265 ----------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGV--GDNV 312

Query: 279 RRPSLIS-KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            R S +  K P+ ++VV   CG  HT  +T    +++WG   NG LG G     +SP+ +
Sbjct: 313 DRCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKII 372

Query: 335 Q 335
           +
Sbjct: 373 E 373


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 190/364 (52%), Gaps = 36/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   + ++ACG  HTL  +E+   +Y+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHTLAYSESRNELYSWGWGDFG 97

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +L  G S ++      + + GL+  + QI+ G  H  A+T++GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSSDLLIPQPIIALQGLR--IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGN 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E SVA+T  G++  WG G  G LG G  +    
Sbjct: 156 TEDSL--VPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGN 276
                  + P  +  ++  K+ + A G+ H+  +  +G +Y +G     ++    F++  
Sbjct: 210 -----DRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSL 264

Query: 277 HARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             ++   +S    S+  V GG+ H+  LTS G L+ WG N+ G +G+G      SP +V+
Sbjct: 265 VPQKLQALSDKLISQ--VSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVK 322

Query: 336 GPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            P  +  V Q+SCGW+HT A++E + + +WG G            + GQLGHG+ +D   
Sbjct: 323 FPQDQRVV-QISCGWRHTIAVTEKENVFSWGRG------------TNGQLGHGDTIDRNS 369

Query: 395 PTIV 398
           P I+
Sbjct: 370 PKII 373



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 179/351 (50%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P ++S L  + +  I+ G  H
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPL-PTQLSALDAQHIDSIACGADH 77

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ELY WG    G+LG G  +  +IP P  +  L G+  KQ A G    +AVT
Sbjct: 78  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQP--IIALQGLRIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  HS  I
Sbjct: 136 MEGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFKGVPIKMVAAGAEHSVAI 186

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            ENG +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G +YT
Sbjct: 187 TENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYT 246

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G+ +    P+++Q   S+  + QVS GW+H+ A+ S G +  WGW    
Sbjct: 247 YGWSKYGQLGHGNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLFGWGW---- 301

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G+++D+  P  V F ++ + +Q+SCG+ HT A+ E
Sbjct: 302 --------NKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTIAVTE 344



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 142/298 (47%), Gaps = 19/298 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+      P    A +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 91  WGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   K   ++ ++ G  HS AIT +GELY WG    G LGLG + 
Sbjct: 151 LGLG-NTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRN 209

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGF 220
            +    P KV  +        A G+  +++V+  G + ++G    G+LGHG  E S++  
Sbjct: 210 DRW--NPEKVSSVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLV-- 265

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P+ ++ L    +   + G+ HS  +   G ++ +G     ++   +      
Sbjct: 266 --------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS 317

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           P  + K P  + VV   CG  HT  +T    +++WG   NG LG G     +SP+ ++
Sbjct: 318 PVQV-KFPQDQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIE 374


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 188/376 (50%), Gaps = 36/376 (9%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           ++ L  +    WG G+ G+LG G  E R  P V ++F+   + ++ CG  HT+  ++   
Sbjct: 34  AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93

Query: 92  -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            +Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H   +T +G+++ WG+
Sbjct: 94  QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N NGQLGLG     +  +P K++   G+  K  A G E + A+T GG +  WG G  G  
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                   LG         P  +  +EG K+ + A G+ HS  +  +G +Y +G     +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    FQ+    R+   +  +P S+  + GG+ HT  +   G+LY WG N+ G +G+   
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318

Query: 326 DVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQ 383
           +V H SP  V  P  E  + QV+CGW+HT A++E K I +WG G S            GQ
Sbjct: 319 NVDHCSPVEVNFP-DEQKIVQVACGWRHTLALTENKNIFSWGRGAS------------GQ 365

Query: 384 LGHGNDVDYIHPTIVN 399
           LGHG  +D   P +++
Sbjct: 366 LGHGEIIDRNTPKMID 381



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 171/356 (48%), Gaps = 28/356 (7%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G  H+  L     V + G  + GQLG  ++    +  +  S     V  + 
Sbjct: 20  EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI 79

Query: 130 TGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            G  H+ A + D  +LY WG    G+LG G  +    P P  +  L G+  KQ A G   
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP--IVALQGMKIKQIACGDSH 137

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
            + VT  G+V SWG   +G+LG G     L          P+ IK  EGV VK+ AAG  
Sbjct: 138 CLTVTFNGQVHSWGRNQNGQLGLGNNQDSL---------LPQKIKAFEGVCVKMIAAGAE 188

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
           H+  I E G +Y +G      +   + +    P  +S +   + V+  CG  H+  ++S 
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           G LYT+G ++ G LG G       P +++    + P+ Q+S GW+HT A++E GK+  WG
Sbjct: 249 GALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGGWRHTMAVAEDGKLYGWG 307

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           W            +  GQ+G  ++VD+  P  VNF +  K +QV+CG+ HT AL E
Sbjct: 308 W------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ +    P    AFE   +K +A G  HT  +TE G +Y  G   +G 
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+S+    S+ P ++S ++ E +V ++ G+ HS +++  G LY +G +  GQLG G   
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K+E L  +   Q + G+  ++AV   GK+  WG    G+         +G  
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    +P  +   +  K+   A G+ H+  + EN  ++ +G  A  ++   E      P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 282 SLISKL 287
            +I  L
Sbjct: 378 KMIDAL 383



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  +    P    A +   +  ++ G  HT+ + E G +Y  G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+ ++   ++++VQ++ G+ H+ A+T +  ++ WG+ ++GQLG G+   +  P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 167 IPTKVECLSGIFTKQ 181
                  L G   KQ
Sbjct: 378 KMIDALSLDGSACKQ 392


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 188/376 (50%), Gaps = 36/376 (9%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           ++ L  +    WG G+ G+LG G  E R  P V ++F+   + ++ CG  HT+  ++   
Sbjct: 34  AALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEM 93

Query: 92  -VYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            +Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H   +T +G+++ WG+
Sbjct: 94  QLYSWGWGDFGRLGHG-NSSDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR 152

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N NGQLGLG     +  +P K++   G+  K  A G E + A+T GG +  WG G  G  
Sbjct: 153 NQNGQLGLGNNQDSL--LPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN- 209

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                   LG         P  +  +EG K+ + A G+ HS  +  +G +Y +G     +
Sbjct: 210 --------LGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQ 261

Query: 270 M---LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    FQ+    R+   +  +P S+  + GG+ HT  +   G+LY WG N+ G +G+   
Sbjct: 262 LGHGDFQDHLVPRKLEALKDVPISQ--ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED- 318

Query: 326 DVLH-SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQ 383
           +V H SP  V  P  E  + QV+CGW+HT A++E K I +WG G S            GQ
Sbjct: 319 NVDHCSPVEVNFP-DEQKIVQVACGWRHTLALTENKNIFSWGRGAS------------GQ 365

Query: 384 LGHGNDVDYIHPTIVN 399
           LGHG  +D   P +++
Sbjct: 366 LGHGEIIDRNTPKMID 381



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 171/356 (48%), Gaps = 28/356 (7%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G  H+  L     V + G  + GQLG  ++    +  +  S     V  + 
Sbjct: 20  EQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVI 79

Query: 130 TGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            G  H+ A + D  +LY WG    G+LG G  +    P P  +  L G+  KQ A G   
Sbjct: 80  CGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQP--IVALQGMKIKQIACGDSH 137

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
            + VT  G+V SWG   +G+LG G     L          P+ IK  EGV VK+ AAG  
Sbjct: 138 CLTVTFNGQVHSWGRNQNGQLGLGNNQDSL---------LPQKIKAFEGVCVKMIAAGAE 188

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSG 306
           H+  I E G +Y +G      +   + +    P  +S +   + V+  CG  H+  ++S 
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSS 248

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           G LYT+G ++ G LG G       P +++    + P+ Q+S GW+HT A++E GK+  WG
Sbjct: 249 GALYTYGWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGGWRHTMAVAEDGKLYGWG 307

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           W            +  GQ+G  ++VD+  P  VNF +  K +QV+CG+ HT AL E
Sbjct: 308 W------------NKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE 351



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 13/246 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ +    P    AFE   +K +A G  HT  +TE G +Y  G   +G 
Sbjct: 150 WGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGN 209

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+S+    S+ P ++S ++ E +V ++ G+ HS +++  G LY +G +  GQLG G   
Sbjct: 210 LGLSDRDDRSV-PEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQ 268

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K+E L  +   Q + G+  ++AV   GK+  WG    G+         +G  
Sbjct: 269 DHL--VPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQ---------VGVE 317

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    +P  +   +  K+   A G+ H+  + EN  ++ +G  A  ++   E      P
Sbjct: 318 DNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 282 SLISKL 287
            +I  L
Sbjct: 378 KMIDAL 383



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  +    P    A +   +  ++ G  HT+ + E G +Y  G N FGQ+G+ +
Sbjct: 259 YGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVED 318

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           N+ +   P+ ++   ++++VQ++ G+ H+ A+T +  ++ WG+ ++GQLG G+   +  P
Sbjct: 319 NVDH-CSPVEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTP 377

Query: 167 IPTKVECLSGIFTKQ 181
                  L G   KQ
Sbjct: 378 KMIDALSLDGSACKQ 392


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 175/357 (49%), Gaps = 29/357 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFGQ 102
           G G+ G+LG G  E R  P +  A     +  +ACG  HT   + T   +Y+ G  DFG+
Sbjct: 30  GRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGR 89

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N      P  I  L+  E+ QI+ G  H  A+T DGE+Y WG+N NGQLGLG   
Sbjct: 90  LG-HGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTD 148

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             ++P   K+    G+  K  A G E + AVT  GK+  WG G  G LG G     +   
Sbjct: 149 DSLVP--HKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRM--- 203

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +   K+ + A G+ H+  + ++G++Y +G     ++   +      P
Sbjct: 204 ------LPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 282 SLISKLP-YSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             ++ L  ++   V GG+ HT  LT  G+LY WG N+ G +G G +D   SP+ +  P  
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 340 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              V QVSCGW+HT A+++   + +WG G S            GQLGHG+ VD   P
Sbjct: 318 HQRVVQVSCGWRHTVAVTDKNNVYSWGRGTS------------GQLGHGDAVDRSAP 362



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 173/360 (48%), Gaps = 47/360 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +HT+ L     V + G  + GQLG  +     L P  I  L   E+  ++ G  H
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAED-RLLPRIIGALNDCEISLVACGADH 68

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +     +Y WG    G+LG G  +   +P P K   L G+  +Q A G    +AVT
Sbjct: 69  TTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKA--LQGLEIRQIACGDSHCLAVT 126

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P  +   EGV VK+ AAG  H+A +
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSL---------VPHKLLAFEGVSVKMLAAGAEHTAAV 177

Query: 254 DENGRVYIFG----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            ++G++Y +G          DR  D+ML  E        +         V CG  HT  +
Sbjct: 178 TDSGKLYGWGWGRYGNLGLGDRG-DRMLPAEVPAVGDEKMCM-------VACGWRHTIAV 229

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
           +  G+LYT+G ++ G LG G       P +V    +E  + QVS GW+HT A++E GK+ 
Sbjct: 230 SQSGKLYTYGWSKYGQLGHGDYADHLLPHQV-AALAEFNITQVSGGWRHTVALTEAGKLY 288

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 421
            WGW            +  GQ+G G+  D+  P +++  G++ + +QVSCG+ HT A+ +
Sbjct: 289 GWGW------------NKFGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD 336



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   ++ +ACG +H L +T  G VY+ G N  GQ
Sbjct: 82  WGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    SL P ++   +   V  ++ G  H++A+T  G+LY WG    G LGLG + 
Sbjct: 142 LGLGDTDD-SLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRG 200

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +++P   +V  +        A G+  ++AV+  GK+ ++G    G+LGHG  +  L   
Sbjct: 201 DRMLP--AEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHL--- 255

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L    +   + G+ H+  + E G++Y +G     ++   + +    P
Sbjct: 256 ------LPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSP 309

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            LIS     + VV   CG  HT  +T    +Y+WG   +G LG G      +P+ +Q
Sbjct: 310 QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQ 366



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 140/304 (46%), Gaps = 28/304 (9%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +++V+ +S G  H+ A+     +  +G+  +GQLG G    +++P    +  L+      
Sbjct: 4   ERKVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLP--RIIGALNDCEISL 61

Query: 182 AALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + + A +     + SWG G  GRLGHG  S +         + P  IK L+G+++
Sbjct: 62  VACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDL---------FVPHPIKALQGLEI 112

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
           +  A G  H   +  +G VY +G     ++   + + +  P  +        + +  G  
Sbjct: 113 RQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAE 172

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT  +T  G+LY WG    G LG+G       P  V     +  +  V+CGW+HT A+S+
Sbjct: 173 HTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPA-VGDEKMCMVACGWRHTIAVSQ 231

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            GK+ T+GW            S  GQLGHG+  D++ P  V         QVS G+ HT 
Sbjct: 232 SGKLYTYGW------------SKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTV 279

Query: 418 ALLE 421
           AL E
Sbjct: 280 ALTE 283


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/362 (33%), Positives = 180/362 (49%), Gaps = 30/362 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   S  +   + ++ CG  HT   +E+   VY+ G  DFG
Sbjct: 42  WGRGEDGQLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFG 101

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      P  I  L   ++ QI+ G  H  A+T+DGE+  WG+N NGQLGLG  
Sbjct: 102 RLG-HGNSSDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTT 160

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              ++P   K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L  
Sbjct: 161 EDSLVP--QKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL-- 216

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +      
Sbjct: 217 -------VPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLT 269

Query: 281 PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L  S   ++ GG+ HT  LTS G LY WG N+ G +G+G      SP +V+ P 
Sbjct: 270 PHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPH 329

Query: 339 SES-PVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
            ++  + Q+SCGW+HT AI+E + + +WG G            + GQLGHG  +D   P 
Sbjct: 330 EQAHSLVQISCGWRHTLAITERQNVFSWGRG------------TNGQLGHGESMDRNLPK 377

Query: 397 IV 398
           I+
Sbjct: 378 II 379



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 175/353 (49%), Gaps = 32/353 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +       P ++S L   +++ I+ G  H
Sbjct: 23  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRPT-PTQLSTLDGLDIISITCGADH 81

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           +++ +    E+Y WG    G+LG G  +    P P K   L  +  +Q A G    +AVT
Sbjct: 82  TTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIK--ALHSLKIRQIACGDSHCLAVT 139

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  H+A +
Sbjct: 140 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSIKMVAAGAEHTAAV 190

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +   V CG  HT  ++S G LYT
Sbjct: 191 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYT 250

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G  +   +P +V+    +S +  +S GW+HT A+ S+G +  WGW    
Sbjct: 251 YGWSKYGQLGHGDFEDHLTPHKVEA-LRDSYISMISGGWRHTMALTSDGNLYGWGW---- 305

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKAL-QVSCGFNHTGALLE 421
                   +  GQ+G G+++D+  P  V F  E   +L Q+SCG+ HT A+ E
Sbjct: 306 --------NKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHTLAITE 350



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 99/245 (40%), Gaps = 61/245 (24%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ E    P    AF+  S+K +A G  HT  +TE G +Y  G   +G 
Sbjct: 147 WGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGN 206

Query: 103 LGISE--------------------------------------NIGYS------------ 112
           LG+ +                                        G+S            
Sbjct: 207 LGLGDRNDRLVPEKVSLVNGDKMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFED 266

Query: 113 -LEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            L P ++  L+   +  IS G+ H+ A+T DG LY WG N  GQ+G+G       P+  K
Sbjct: 267 HLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVK 326

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                     Q + G+  ++A+T    V SWG G +G+LGHG+         S     P+
Sbjct: 327 FPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGE---------SMDRNLPK 377

Query: 231 LIKEL 235
           +I+ L
Sbjct: 378 IIEVL 382



 Score = 38.1 bits (87), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGN 388
           S   V GP  +  V  +S G  H+ A+  G I+ +WG G       EDG     QLGHG+
Sbjct: 9   SGSEVSGPIRQ--VILISAGASHSVALLSGNIVCSWGRG-------EDG-----QLGHGD 54

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             D   PT ++  + +  + ++CG +HT +  E
Sbjct: 55  AEDRPTPTQLSTLDGLDIISITCGADHTTSYSE 87


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 179/363 (49%), Gaps = 42/363 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT   +E+   VY+ G + F 
Sbjct: 40  WGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGCDLFT 99

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
              I      +L  LRI        QI+ G  H  A+T+DGE+  WG+N NGQLGLG   
Sbjct: 100 PQPIK-----ALHGLRIK-------QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE 147

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G  +  L   
Sbjct: 148 DSL--VPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRL--- 202

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  +EGVK+   A G+ H+  +  +G +Y +G     ++   +      P
Sbjct: 203 ------VPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTP 256

Query: 282 SLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPF 338
             +  L  +   E+  G  HT  LTS G+LY WG N+ G +G+G  +V H SP +V+ P 
Sbjct: 257 HKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGD-NVDHCSPVQVKFPH 315

Query: 339 SESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            E  V  +SCGW+HT A++E + + +WG G            + GQLGHG  +D   P +
Sbjct: 316 -EQKVVHISCGWRHTLAVTERQNVFSWGRG------------TNGQLGHGESIDRNIPKM 362

Query: 398 VNF 400
           +  
Sbjct: 363 IEV 365



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 42/351 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P  +S L   EVV ++ G  H
Sbjct: 21  ISAGASHSVALLXGNVVCSWGRGEDGQLGHGDAED-RLSPTYLSALDGHEVVSVTCGADH 79

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +    ++Y WG +              +  P  ++ L G+  KQ A G    +AVT
Sbjct: 80  TTAYSESFTQVYSWGCD--------------LFTPQPIKALHGLRIKQIACGDSHCLAVT 125

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV VK+ AAG  H+A +
Sbjct: 126 MDGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVSVKMVAAGAEHTAAV 176

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            E+G +Y +G      +   + N    P  +S +   +  +V CG  HT  ++S G LYT
Sbjct: 177 TEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYT 236

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +G ++ G LG G  +   +P +++    E+ + ++S GW+HT A+ S+GK+  WGW    
Sbjct: 237 YGWSKYGQLGHGDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYGWGW---- 291

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G++VD+  P  V F    K + +SCG+ HT A+ E
Sbjct: 292 --------NKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAVTE 334


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 182/364 (50%), Gaps = 36/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    +  P    A     ++ +ACG  HT+ LT  G V+  G  D G+
Sbjct: 5   WGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDDGR 64

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P     L  ++V Q++ G +H++A+T +G+LY WG    G+LG G +A
Sbjct: 65  LGHGDN-GWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P +VE L G    Q A G   +  VT  G + +WG   +G  GHG+        
Sbjct: 124 GHA--TPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVAGHGETEG----- 176

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y PRL++ +   +V +I+A GF H+A + + G ++ +G+    ++      +   
Sbjct: 177 ---HQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWGEGKFGRLGHMSERNCHS 232

Query: 281 PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQ 335
           P+++  +      +V CGG+HT V++  G LYT+G  E+G LG        +P   E + 
Sbjct: 233 PTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALD 292

Query: 336 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           G F    V Q++CGW H+ A++ +G + TWG  G H           G+LGHGN      
Sbjct: 293 GMF----VSQITCGWSHSVALTVKGLVYTWG-NGDH-----------GKLGHGNGRKVAV 336

Query: 395 PTIV 398
           P  V
Sbjct: 337 PQAV 340



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/335 (34%), Positives = 169/335 (50%), Gaps = 32/335 (9%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK 149
            V+  G  + GQLG+ +      EP  +  L+   V QI+ G  H+  +T DGE++ WG+
Sbjct: 1   AVFTWGRGEDGQLGLGDTSDQD-EPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +G+LG G    K +P  T  + L+G    Q   G   + AVTG G + +WG G  G+L
Sbjct: 60  GDDGRLGHGDNGWKYVPRMT--QSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKL 117

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR--AV 267
           GHG E+            TP+ ++ L G  V   A G  H+A +  +G +Y +GD+   V
Sbjct: 118 GHGDEAG---------HATPKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                 EG H   P L+  +      ++   G+HT ++T  GEL+TWG  + G LG  S 
Sbjct: 169 AGHGETEG-HQYLPRLLESMAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSE 227

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
              HSP  V     + P  QVSCG  HTA +SE G++ T+G GG HG           QL
Sbjct: 228 RNCHSPTIVDYMVGKKP-RQVSCGGFHTAVVSEDGRLYTFG-GGEHG-----------QL 274

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GH + V+ + PT V   + +   Q++CG++H+ AL
Sbjct: 275 GHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVAL 309



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 140/283 (49%), Gaps = 30/283 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG+  +GQLGLG  + +    PT V+ L G+  +Q A G   +V +T  G+V +WG 
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQ--DEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGR 59

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG             +Y PR+ + L G  V     G  H+A +  NG +Y +G
Sbjct: 60  GDDGRLGHGDNGW---------KYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWG 110

Query: 264 DRAVDKMLF-QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                K+    E  HA  P  +  L      ++ CG  HT ++T+ G LYTWG  ENG  
Sbjct: 111 GGMYGKLGHGDEAGHAT-PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKENGVA 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVS-CGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
           G G  +      R+    +   V Q+S CG+ HTA +++ G++ TWG     G F     
Sbjct: 170 GHGETEGHQYLPRLLESMAAKRVAQISACGF-HTAIVTDAGELFTWG----EGKF----- 219

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              G+LGH ++ +   PTIV++    K  QVSCG  HT  + E
Sbjct: 220 ---GRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSE 259



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 4/131 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +GRLG  S  +   P +         + ++CGG HT  ++E G +Y  G  + GQ
Sbjct: 214 WGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG ++ +   + P  +  L    V QI+ G+ HS A+TV G +Y WG   +G+LG G   
Sbjct: 274 LGHNDRVN-KMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGN-- 330

Query: 162 AKVIPIPTKVE 172
            + + +P  VE
Sbjct: 331 GRKVAVPQAVE 341


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 182/373 (48%), Gaps = 54/373 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA + H + ++ CG  HT  +      VY+ G  DFG
Sbjct: 32  WGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFG 91

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N    L P  I  L   ++ QI+ G  H  A+T++GE+  WG+N NGQLGLG  
Sbjct: 92  RLG-HGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTT 150

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G++  WG G  G LG G  +  L  
Sbjct: 151 EDSL--VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRL-- 206

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------------DRAV 267
                   P+ +  ++G K+ + A G+ H+  +   G +Y +G             DR V
Sbjct: 207 -------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLV 259

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSID 326
              L      A R   IS+       + GG+ HT  LT+ G+LY WG N+ G +G G   
Sbjct: 260 PHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 307

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLG 385
              SP +++ P  +  V Q+SCGW+HT A+++ + + +WG G            + GQLG
Sbjct: 308 DHCSPIQIKFP-QDQKVIQISCGWRHTLAVTDKQNVFSWGRG------------TNGQLG 354

Query: 386 HGNDVDYIHPTIV 398
           HG  VD   P I+
Sbjct: 355 HGESVDRNTPMIL 367



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 182/351 (51%), Gaps = 30/351 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L   E+V ++ G  H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGD-AEDRLSPTQLSALDGHEIVSVTCGADH 71

Query: 135 SSAITV-DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A +V   E+Y WG    G+LG G  +  + P P K   L G+  +Q A G    +AVT
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIK--ALHGLKIRQIACGDSHCLAVT 129

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A +
Sbjct: 130 MEGEVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
            E+G ++ +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
           +G ++ G LG G  +    P R++    ++ + Q+S GW+HT A++ +GK+  WGW    
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDGKLYGWGW---- 295

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +  GQ+G G+++D+  P  + F ++ K +Q+SCG+ HT A+ +
Sbjct: 296 --------NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTD 338



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 2/135 (1%)

Query: 48  YGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           YG+LG G  E R  P    A    ++  ++ G  HT+ LT  G +Y  G N FGQ+G  +
Sbjct: 246 YGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 305

Query: 108 NIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           NI +   P++I     ++V+QIS G+ H+ A+T    ++ WG+ +NGQLG G+   +  P
Sbjct: 306 NIDH-CSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 364

Query: 167 IPTKVECLSGIFTKQ 181
           +  +   + G   +Q
Sbjct: 365 MILEALSVDGCSGQQ 379


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 40/387 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  + R  P + S  E   + ++ CG  HT+  +E+   VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P+R + GLK  + QI+ G  H  A+T++G++  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSSDLFTPQPIRQLHGLK--IKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P K++   G+  K  A G E + AVT  G++  WG G  G LG G     L 
Sbjct: 156 TEDSL--VPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRL- 212

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +    G K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 213 --------VPEKVSLPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHL 264

Query: 280 RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   +  ++  G  HT  +TS G+LY WG N+ G +G+G      SP +V+ P
Sbjct: 265 IPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLP 324

Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
             E  V  +SCGW+HT A++E + + +WG G            + GQLG+G   D   P 
Sbjct: 325 L-EQKVILISCGWRHTLAVTERQNVFSWGRG------------TNGQLGNGECTDRNVPV 371

Query: 397 IVNFGENVKALQV--SCGFNHTGALLE 421
           I      +KAL V  SCG +   ++++
Sbjct: 372 I------IKALSVDGSCGQHIESSMVD 392



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 174/355 (49%), Gaps = 38/355 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V   G  + GQLG  +     L P  +S L+  E++ +  G  H
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQD-RLSPTILSTLEGLEIISVICGADH 77

Query: 135 SSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    ++Y WG    G+LG G  +    P P  +  L G+  KQ A G    +AVT
Sbjct: 78  TIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQP--IRQLHGLKIKQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  +GV +K+ AAG  H+A +
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSL---------VPQKIQAFQGVPIKMVAAGAEHTAAV 186

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
            E+G +Y +G      +   +      P  +S LP+ E++V   CG  HT  ++S G LY
Sbjct: 187 TEDGELYGWGWGRYGNLGLGDRKDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLY 245

Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
           T+G ++ G LG G      + H  E +QG F    + Q+S GW+HT A+ S+GK+  WGW
Sbjct: 246 TYGWSKYGQLGHGDYADHLIPHQLEALQGSF----ISQISGGWRHTMAVTSDGKLYGWGW 301

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +  GQ+G G++VD   P  V      K + +SCG+ HT A+ E
Sbjct: 302 ------------NKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTE 344


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 122/357 (34%), Positives = 179/357 (50%), Gaps = 35/357 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G+ G+LG G  +    P   S      ++++ CG  +T+ +  + G VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFG 96

Query: 102 QLGISE-NIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG  + N  +   P+   SG  + V +++ G  H+  +  +GEL+ +G+N NGQLGLG 
Sbjct: 97  RLGHGDCNDVFVPRPIEFFSG--RPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGH 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P    V  L G   +  A G E S+A T  G V SWG G  G LG G+      
Sbjct: 155 TNDCLSP--QLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGE------ 206

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              S   Y P  +  LEG+++  A  G+ HSA + E+GRV+ FG     ++    G+H  
Sbjct: 207 ---SQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQL--GHGDHTD 261

Query: 280 R--PSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           R  P  ++ L ++    V GG+ HT    S G LY WG N+ G LG+G      SP  V 
Sbjct: 262 RTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVG 321

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           G  +   V  V+CGW+HT A++E G++ +WG G              GQLGHG + D
Sbjct: 322 GALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRG------------VNGQLGHGAEQD 366



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 133/306 (43%), Gaps = 28/306 (9%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           R S  +  V  +S G  HS AI   G +  WG+  +GQLG G+  A     P  +  L+ 
Sbjct: 7   RSSEEEPGVTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQ--ADECLAPKAISTLTD 64

Query: 177 IFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
              +    G E ++AV    G+V SWG G  GRLGHG  + +         + PR I+  
Sbjct: 65  AGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDV---------FVPRPIEFF 115

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEV 293
            G  V   A G  H+  +   G ++ FG     ++     N    P L+  L       V
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSV 175

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG  H+   T  G +++WG    G LG G     + P RV G      +    CGW+H+
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHS 234

Query: 354 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A +SE G++ T+GW            S  GQLGHG+  D   P  V    + +   V+ G
Sbjct: 235 AVVSEDGRVFTFGW------------SKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGG 282

Query: 413 FNHTGA 418
           + HT A
Sbjct: 283 WRHTMA 288



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LG G  + R+ P      E   + +  CG  H+  ++E G V+  G + +GQ
Sbjct: 194 WGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQ 253

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++   ++ P +++ L+   +  ++ G+ H+ A    G LY WG N  GQLGLG  +
Sbjct: 254 LGHGDHTDRTV-PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSS 312

Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +  P P  V   L+G        G+  +VAVT GG+V SWG G +G+LGHG E  +
Sbjct: 313 DR--PSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 109/244 (44%), Gaps = 28/244 (11%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   SVA+   G V SWG G  G+LGHGQ    L          P+ I  L    ++ 
Sbjct: 19  SCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECL---------APKAISTLTDAGIES 69

Query: 243 AAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGY 298
              G  ++ A     G+VY +G     ++   + N    P  I   S  P    V CG  
Sbjct: 70  VVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPV-HRVACGDT 128

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT V+   GEL+T+G N+NG LG+G  +   SP+ V     E  V  V+CG +H+ A +E
Sbjct: 129 HTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGER-VRSVACGSEHSLAATE 187

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            G + +WGWG              G LG G   D   PT V   E ++ +   CG+ H+ 
Sbjct: 188 SGTVFSWGWG------------RYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235

Query: 418 ALLE 421
            + E
Sbjct: 236 VVSE 239


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 185/365 (50%), Gaps = 39/365 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  + R  P   SA +   +  + CG  HT+  +E+G  VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  ++    L P  I  L+  ++ QI+ G  H  A+T+D ++  WG+N NG+LGLG  
Sbjct: 98  RLGHGDHSDL-LIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTA 156

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++    I  K  A G E SVA+T  G +  WG G  G LG G  +     
Sbjct: 157 EDSL--LPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND---- 210

Query: 221 LRSTSEYTPRLIKE---LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQE 274
                    RL+ E   ++G K+ + A G+ H+ C+  +G +Y  G     ++    F++
Sbjct: 211 ---------RLLPEKVTVDGDKMAMVACGWRHTICVSSSGGLYTNGWGKYGQLGHGDFED 261

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               R+   +S   +  +V  G  H+  LTS G+L  WG N+ G +G+G+     SP +V
Sbjct: 262 HLVPRKVQALSD-KFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCSPMQV 320

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             P  +  V  +SCGW+HT A++E + + +WG G +            GQLG+G  +D  
Sbjct: 321 NFPHDQK-VQMISCGWRHTIAVTERENVYSWGRGAN------------GQLGNGETIDRN 367

Query: 394 HPTIV 398
            PTI+
Sbjct: 368 VPTII 372



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 176/354 (49%), Gaps = 37/354 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +     L P ++S L  ++++ ++ G  H
Sbjct: 19  VSAGASHSVALLSGNVVCSWGRGEDGQLGHGDT-DDRLFPTKLSALDGQDIICVTCGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +  G ++Y WG    G+LG G  +  +IP P K   L G+  +Q A G    +AVT
Sbjct: 78  TMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKA--LQGLMIQQIACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              +VLSWG   +G LG G  E S+L          P+ I+  E + +K+ AAG  HS  
Sbjct: 136 MDSQVLSWGRNQNGELGLGTAEDSLL----------PQKIQIFEEIPIKMVAAGAEHSVA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS----KLPYSEEVVCGGYHTCVLTSGGE 308
           I ++G +Y +G      +   + N    P  ++    K+     V CG  HT  ++S G 
Sbjct: 186 ITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDKMAM---VACGWRHTICVSSSGG 242

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           LYT G  + G LG G  +    P +VQ   S+  + QVS GW+H+ A+ S G++L WGW 
Sbjct: 243 LYTNGWGKYGQLGHGDFEDHLVPRKVQA-LSDKFISQVSGGWRHSMALTSSGQLLGWGW- 300

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                      +  GQ+G GN+ D   P  VNF  + K   +SCG+ HT A+ E
Sbjct: 301 -----------NKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTE 343


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 34/366 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 49  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 108

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 109 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 167

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 168 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 226 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 276

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L  +   ++  G  HT  L + G+LY WG N+ G +G+G  +   SP +V
Sbjct: 277 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 336

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             P +E  V QV+CGW+HT A++E K + +WG G S            GQLGHG  VD  
Sbjct: 337 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGHGEIVDRN 383

Query: 394 HPTIVN 399
            P +++
Sbjct: 384 IPKMID 389



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 181/361 (50%), Gaps = 34/361 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 24  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 83

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 84  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 141

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 142 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 191

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 192 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 251

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            ++S G +YT+G ++ G LG G  +    P +++    ++ + Q+S GW+HT A++ +GK
Sbjct: 252 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGK 310

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           +  WGW            +  GQ+G G++ D+  P  VNF    K +QV+CG+ HT AL 
Sbjct: 311 LYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 358

Query: 421 E 421
           E
Sbjct: 359 E 359



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +  +ACG +H L +T  G V++ G N  GQ
Sbjct: 106 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 165

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   +   V  I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 166 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 224

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  IP KV  ++G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 225 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 279

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 280 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 333

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             ++  P  ++VV   CG  HT  LT    +++WG   +G LG G I   + P+ +    
Sbjct: 334 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 392

Query: 339 SE 340
           S+
Sbjct: 393 SD 394


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 176/366 (48%), Gaps = 34/366 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 44  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++   +  
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L  +   ++  G  HT  L + G+LY WG N+ G +G+G  +   SP +V
Sbjct: 272 DHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 331

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             P +E  V QV+CGW+HT A++E K + +WG G S            GQLGHG  VD  
Sbjct: 332 NFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS------------GQLGHGEIVDRN 378

Query: 394 HPTIVN 399
            P +++
Sbjct: 379 IPKMID 384



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 181/361 (50%), Gaps = 34/361 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 19  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            ++S G +YT+G ++ G LG G  +    P +++    ++ + Q+S GW+HT A++ +GK
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQISGGWRHTMALAADGK 305

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           +  WGW            +  GQ+G G++ D+  P  VNF    K +QV+CG+ HT AL 
Sbjct: 306 LYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALT 353

Query: 421 E 421
           E
Sbjct: 354 E 354



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 147/302 (48%), Gaps = 17/302 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P    A +   +  +ACG +H L +T  G V++ G N  GQ
Sbjct: 101 WGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  N   SL P +I   +   V  I+ G  H++A+T DG+LY WG    G LGLG + 
Sbjct: 161 LGLG-NTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  IP KV  ++G      A G+  ++ V+  G + ++G    G+LGHG     L   
Sbjct: 220 DRL--IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHL--- 274

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  ++ L+   +   + G+ H+  +  +G++Y +G     ++   +      P
Sbjct: 275 ------VPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSP 328

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             ++  P  ++VV   CG  HT  LT    +++WG   +G LG G I   + P+ +    
Sbjct: 329 VQVN-FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDALS 387

Query: 339 SE 340
           S+
Sbjct: 388 SD 389


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 187/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  FE   ++ + CG  HT+FL E G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +      +P ++  L  + +V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKA---RKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  V+ LS +   Q A G+  S+A+  GG++ SWG    G+LG GQ+ + + 
Sbjct: 120 IVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVC 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   +P++I+ L+G+     +AG  HS  +  +G ++ +G     ++   + +  R
Sbjct: 180 --------SPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRR 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P L+  L  S++VV   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPVLLKTL-RSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S GKI ++G GG+            GQLG  +  + I 
Sbjct: 290 ELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGN------------GQLGTRSTCNRIS 337

Query: 395 PTIV 398
           PT V
Sbjct: 338 PTPV 341



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 29/281 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +V+  P + E   G   +    G   +V +   G V + G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           +   P  +  L+   +   + G  H+  +++ G+V+ +G
Sbjct: 61  NDLGQLGHEK-----------ARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKGQVFAWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +  R P  +  L   +  +V CG +H+  L  GGE+++WG N+ G L
Sbjct: 110 LGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKYGQL 169

Query: 321 GIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           G+G     + SP+ +Q      P  Q+S G  H+  ++  G I  WG             
Sbjct: 170 GLGQQGACVCSPQVIQS-LQGIPFGQISAGGAHSFGLTLSGAIFGWG------------R 216

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  GQLG G++ D   P ++    + + + + CG +HT AL
Sbjct: 217 NKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAAL 257



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGLG  + R  PV+        +  + CG  HT  LT+ G V+  G   +GQ
Sbjct: 214 WGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG   +  + + P ++  L   VV QI+ G  H+ A I   G++  +G   NGQLG    
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRST 332

Query: 161 AAKVIPIPTK 170
             ++ P P K
Sbjct: 333 CNRISPTPVK 342


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 197/384 (51%), Gaps = 34/384 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+ G GS   +  P+     +  ++  +ACG  HT+ LTE   V++ G  D G+
Sbjct: 11  WGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGR 70

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG ++N  +   P  +S L  K + Q++ G +H++AI+  G L+ WG    G+LG G + 
Sbjct: 71  LGHADN-HWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGNEV 129

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +VE   G   +Q A G   + A+  GG+V  WG   +G  G G+ +      
Sbjct: 130 GH--PAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAE----- 182

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y P+ ++ L+GVK+ +IAA GF H+A I ++G ++ +G+    ++   +GN   +
Sbjct: 183 ---HQYLPKKLEALKGVKITQIAACGF-HTAAITQDGALWSWGEGKFGRL--GQGNEKNQ 236

Query: 281 --PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +  L     ++V CGG+H+  +T  G++ T+G  E+G LG G       P  V+ 
Sbjct: 237 VTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKA 296

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
               + + QV+CGW HT  +SE GK+ T+G  G H           G+LGHG +     P
Sbjct: 297 -LEGAGIVQVTCGWSHTVTLSEDGKVFTFG-NGDH-----------GKLGHGANAKSALP 343

Query: 396 TIVNFGENVKALQVSCGFNHTGAL 419
            +V    N+K  +V+    HT AL
Sbjct: 344 KLVESLANMKVAKVASYNEHTVAL 367



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 161/335 (48%), Gaps = 30/335 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y+ G  + GQ G        + P+ + GLK   VVQI+ G  H+  +T D +++ WG+ 
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEM-PMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRG 66

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            +G+LG      K +P    V  L+G   KQ   G   + A++  G + +WG G  G+LG
Sbjct: 67  DDGRLGHADNHWKYVP--HLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLG 124

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG E              P  ++   G +V+  A G  H+A +   G VY +GDR     
Sbjct: 125 HGNE---------VGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRENGVC 175

Query: 271 -LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            + +   H   P  +  L   +  ++   G+HT  +T  G L++WG  + G LG G+   
Sbjct: 176 GIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKN 235

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 386
             +P  V+G      V QV+CG  H+A ++E G +LT+G GG HG           QLGH
Sbjct: 236 QVTPCCVEG-LQGVRVKQVACGGFHSACVTEDGDVLTFG-GGEHG-----------QLGH 282

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+  +   P +V   E    +QV+CG++HT  L E
Sbjct: 283 GDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSE 317



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 135/286 (47%), Gaps = 30/286 (10%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           D  LY WG+  +GQ G G    + +P+P  VE L  +   Q A G   +V +T    V S
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMP--VEGLKHLTVVQIACGSGHTVVLTEDKDVWS 62

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGH           +  +Y P L+  L G  +K    G  H+A I + G ++
Sbjct: 63  WGRGDDGRLGHAD---------NHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALW 113

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
            +G     K+    GN    P+      +     E++ CG  HT  L +GGE+Y WG  E
Sbjct: 114 TWGGGMYGKL--GHGNEVGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDRE 171

Query: 317 NGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
           NG  GIG + +  + P++++           +CG+ HTAAI++   L W WG   G F  
Sbjct: 172 NGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGF-HTAAITQDGAL-WSWG--EGKF-- 225

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G+LG GN+ + + P  V   + V+  QV+CG  H+  + E
Sbjct: 226 ------GRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTE 265


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 173/335 (51%), Gaps = 22/335 (6%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    +  + CG  HT+FL + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +      +P  +  L  ++ V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKP---RKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  ++CLS +   Q A G+  S A++ GG+V SWG    G+LG G   S + 
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TP++I+ L+G+     +AG  HS  I  +G V+ +G     ++   + N   
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRW 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+ V+   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPALLKSL-RSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
               + V Q+SCG +HT A   S GK+ ++G GG+
Sbjct: 290 ELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGN 324



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 124/283 (43%), Gaps = 39/283 (13%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G        G + +V +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +               P  +  L+   +   + G  H+  +++ G+++ +G   
Sbjct: 64  GQLGHEKPRK-----------KPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           D  +    F+E    R P  I  L   +  +V CG  H+  L+ GG++++WG N+ G LG
Sbjct: 113 DGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLG 170

Query: 322 IG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           +G    SI      + +QG     P  Q+S G  H+ AI+  G +  WG           
Sbjct: 171 LGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWG----------- 215

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             +  GQLG  +  D   P ++    + + + VSCG +HT AL
Sbjct: 216 -RNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAAL 257



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S   P +  + +      L+ GGAH+  +T +G V+  G N FG
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++        L  S   + V+ +S G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
            ++   P KV  L G    Q + G + ++A T   GK+ S+G GG+G+LG
Sbjct: 281 HEI--NPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLG 328


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 162/320 (50%), Gaps = 19/320 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+   + ++ CG  HT   +E    VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFG 97

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + G+K  + Q++ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 98  RLGHGNSTDVFTPQPVKALQGIK--IKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++   GI  K  A G E + AVT  G +  WG G  G LG G  +    
Sbjct: 156 TEDSL--LPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRN---- 209

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  + P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++   +     
Sbjct: 210 -----DRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHL 264

Query: 280 RPSLISKL-PYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   S   + GG+ HT  LTS G+LY WG N+ G +G G      SP +V  P
Sbjct: 265 VPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFP 324

Query: 338 FSESPVDQVSCGWKHTAAIS 357
             E  V QV+CGW+HT A +
Sbjct: 325 -EEQKVAQVACGWRHTLAFT 343



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 175/350 (50%), Gaps = 32/350 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     +   G  + GQLG  +     L P  ISG     +  +  G  H
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAED-RLVPTVISGFDAPGITSVICGADH 77

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G       P P  V+ L GI  KQ A G    +AVT
Sbjct: 78  TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQP--VKALQGIKIKQLACGDSHCLAVT 135

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+VLSWG   +G+LG G  E S+L          P+ I+  EG+ VK+ AAG  H+A 
Sbjct: 136 MAGEVLSWGRNQNGQLGLGTTEDSLL----------PQTIQAFEGISVKMIAAGAEHTAA 185

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++S G LY
Sbjct: 186 VTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMVLVACGWRHTITVSSSGSLY 245

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +V+    +S   Q+S GW+HT A+ S+GK+  WGW   
Sbjct: 246 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGW--- 301

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                    +  GQ+G G++ D+  P  VNF E  K  QV+CG+ HT A 
Sbjct: 302 ---------NKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAF 342



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLIS--KLPYSEEVVCG 296
           V + +AG  HS  +     +  +G R  D  L       R  P++IS    P    V+CG
Sbjct: 16  VVLVSAGASHSVALLAGNVLCTWG-RGEDGQLGHGDAEDRLVPTVISGFDAPGITSVICG 74

Query: 297 GYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
             HT   +    ++Y+WG  + G LG G+   + +P+ V+       + Q++CG  H  A
Sbjct: 75  ADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKA-LQGIKIKQLACGDSHCLA 133

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++  G++L+WG             +  GQLG G   D + P  +   E +    ++ G  
Sbjct: 134 VTMAGEVLSWG------------RNQNGQLGLGTTEDSLLPQTIQAFEGISVKMIAAGAE 181

Query: 415 HTGALLE 421
           HT A+ E
Sbjct: 182 HTAAVTE 188


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 29/281 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           G+G       SP+ ++      P  QV+ G  H+  ++  G I  WG             
Sbjct: 170 GLGIECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------R 216

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 217 NKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 179/372 (48%), Gaps = 33/372 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTL-FLTETGCV 92
           L  +    WG G+ G+LG G  E R  P + S F+   + ++  CG  HT  +  E   +
Sbjct: 36  LSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQL 95

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G  DFG+LG   N      P  I  L+  ++ QI+ G  H  A+T  G+++ WG+N 
Sbjct: 96  YSWGWGDFGRLGHG-NSSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ 154

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           NGQLGLG     ++P   K+    G+  K  A G E + A+   G +  WG G  G LG 
Sbjct: 155 NGQLGLGNTEDSLLP--QKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGL 212

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G  +  L          P  +  +EG K+ + A G+ H+  +  +G +Y +G     ++ 
Sbjct: 213 GDRNDRL---------VPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLG 263

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +      P  +  L   +  ++  G  HT  +   G+LY WG N+ G +G+   +V H
Sbjct: 264 HGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVAD-NVDH 322

Query: 330 -SPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHG 387
            SP +V  P  E  V QV+CGW+HT A++E K + +WG G S            GQLGHG
Sbjct: 323 CSPVQVIFP-DEQKVAQVACGWRHTLALTENKNVFSWGRGTS------------GQLGHG 369

Query: 388 NDVDYIHPTIVN 399
             +D   P +++
Sbjct: 370 EIIDRNTPKMID 381



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 180/359 (50%), Gaps = 33/359 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
           + ++  ++ G  H++ L  +  V + G  + GQLG  +     + P  +SG     +   
Sbjct: 19  EQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPV-PTLLSGFDVPGIASV 77

Query: 128 ISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +  G  H++A + +  +LY WG    G+LG G  +    P P  +E L GI  KQ A G 
Sbjct: 78  VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQP--IEALQGIKIKQIACGD 135

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +AVT  G+V SWG   +G+LG G  E S+L          P+ I   EGV VK+ AA
Sbjct: 136 SHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLL----------PQKIHAFEGVCVKMIAA 185

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVL 303
           G  H+A I E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  +
Sbjct: 186 GAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMVLVACGWRHTVTV 245

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
           +S G+LYT+G ++ G LG G  +    P +++    +  + Q++ GW+HT A++ +GK+ 
Sbjct: 246 SSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDRFISQIAGGWRHTMAVAGDGKLY 304

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WGW            +  GQ+G  ++VD+  P  V F +  K  QV+CG+ HT AL E
Sbjct: 305 GWGW------------NKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHTLALTE 351


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 118/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+ ++      P  QV+ G  H+  ++  G I  WG             +  
Sbjct: 173 IECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 31/282 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           G+G ID     SP+ ++      P  QV+ G  H+  ++  G I  WG            
Sbjct: 170 GLG-IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------ 215

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 173/368 (47%), Gaps = 41/368 (11%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
           A WG G+ G+LG G  +    P   +A     + A+ CG  +T+ +  + G +Y+ G  D
Sbjct: 32  ASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGD 91

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGL 157
           FG+LG  E  G    P  I+    + V +++ G  H+  +T  DG LY +G+N NGQLGL
Sbjct: 92  FGRLGHGE-CGDVFVPRPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGL 150

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G     + P    V  L G      A G E S+A T  G V SWG G  G LG G     
Sbjct: 151 GHTNDCLSP--QLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGD---- 204

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S   YTP  +  L+GV V     G+ HSA + + GRV+ FG     ++   +   
Sbjct: 205 -----SQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVD 259

Query: 278 ARRPSLISKLPYSE-EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             RP L++ L +     V GG+ HT    S G LY WG N+ G LG+G  +   +P  V 
Sbjct: 260 HTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVA 319

Query: 336 G-----------PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
           G             +   V  ++CGW+HT A++E G++ +WG G              GQ
Sbjct: 320 GFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRG------------VNGQ 367

Query: 384 LGHGNDVD 391
           LGHG + D
Sbjct: 368 LGHGAEQD 375



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 140/302 (46%), Gaps = 29/302 (9%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V+ +S G  HS A+   G +  WG+  +GQLG G+  A     PT +  L+      
Sbjct: 9   EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQ--ADQCTSPTCIAALTDAGVDA 66

Query: 182 AALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
              G E +VAV    G++ SWG G  GRLGHG+   +         + PR I    G  V
Sbjct: 67  VVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDV---------FVPRPIAFFSGRPV 117

Query: 241 KIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
              A G  H+  + + +G +Y FG     ++     N    P L++ L       V CG 
Sbjct: 118 ARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGS 177

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            H+   T  G +++WG    G LG G     ++P RV G      V  V CGW+H+A ++
Sbjct: 178 EHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVG-LDGVTVTSVVCGWRHSAVVT 236

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            EG++ T+GW            S  GQLGHG+ VD+  P +V   ++ +   V+ G+ HT
Sbjct: 237 DEGRVFTFGW------------SKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHT 284

Query: 417 GA 418
            A
Sbjct: 285 MA 286



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 12/186 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LG G  + R+ P      +  ++ ++ CG  H+  +T+ G V+  G + +GQ
Sbjct: 192 WGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQ 251

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +++ ++  P  ++GL+   V  ++ G+ H+ A   +G LY WG N  GQLGLG   
Sbjct: 252 LGHGDHVDHT-RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSE 310

Query: 162 AKVIPIPTK-------VECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +  P P                  ++ AL   G+  +VAVT  G+V SWG G +G+LGH
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGH 370

Query: 212 GQESSI 217
           G E  +
Sbjct: 371 GAEQDL 376



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 14/189 (7%)

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
           E  +V   + G  HS  + + G V  +G     ++   + +    P+ I+ L  +  + V
Sbjct: 8   EEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAV 67

Query: 294 VCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           VCG  Y   V +S G++Y+WG  + G LG G    +  P  +   FS  PV +V+CG  H
Sbjct: 68  VCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPI-AFFSGRPVARVACGDTH 126

Query: 353 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           T  +++G           G     G +  GQLG G+  D + P +V   +  +   V+CG
Sbjct: 127 TLVVTQGD----------GALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACG 176

Query: 413 FNHTGALLE 421
             H+ A  E
Sbjct: 177 SEHSLAATE 185


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+ ++      P  QV+ G  H+  ++  G I  WG             +  
Sbjct: 173 IECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+ ++      P  QV+ G  H+  ++  G I  WG             +  
Sbjct: 173 IECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+S S   P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + + P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    +P+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 172 GFELKSQSAPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+S S   P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKSQS--APQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE-L 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 176 KSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + + P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    +P+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 172 GFELKSQSAPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  W            G + 
Sbjct: 173 -IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGW------------GRNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 124/282 (43%), Gaps = 31/282 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L     + R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           G+G ID     SP+ ++      P  QV+ G  H+  ++  G I  W            G
Sbjct: 170 GLG-IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGW------------G 215

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VY+ GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +  Y   P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +  +    +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  W            G + 
Sbjct: 173 -IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGW------------GRNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 198/406 (48%), Gaps = 51/406 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LGL +  + + P          +K +  G + ++ LT  G VY+ G N  G 
Sbjct: 54  WGYGGFGQLGLQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGI 113

Query: 103 LGISENIGYSL-EPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
           LG  + + +++ +P RI   L K++ QIS G  H +A+T DGE+Y WG    G+LG  + 
Sbjct: 114 LGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEE 173

Query: 160 -KAAKVIPI---------------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            K  + I I               P K+E L  I  KQ A G + +V ++  GKV ++G 
Sbjct: 174 LKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGY 233

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G LG+  + +        S  TP+LIK+L  + VKI +AG+   A I + G++Y +G
Sbjct: 234 NQYGSLGYVSDQN--------SVTTPQLIKDLNDI-VKI-SAGYSFCAAITKQGKLYTWG 283

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           +    ++   +  +  +PS+++       +V   CG      LT  G+LYTWG   +G L
Sbjct: 284 NNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQL 343

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
           G G+   L++P  V+  F +  + +++CG  H A I+E   L            + G  S
Sbjct: 344 GHGNKSDLYAPRHVE--FKQKII-KIACGGSHAAFITEDNQLY-----------QFGRGS 389

Query: 381 GGQLGHGNDVD-----YIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GQLG G +V         P +V + +  + + V+CG  HT A+ +
Sbjct: 390 EGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQ 435



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 161/343 (46%), Gaps = 28/343 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKN 150
           VY+ G   FGQLG+     Y   P  I  L  K++ ++  G   S A+T +GE+Y WGKN
Sbjct: 51  VYSWGYGGFGQLGLQNENNY-YTPTEIEVLTDKKIKKVEAGKSISMALTHNGEVYSWGKN 109

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G LG   + +  +  P ++E L G   KQ + G     AVT  G+V +WG    G+LG
Sbjct: 110 KGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLG 169

Query: 211 H----GQESSI------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           H     QE  I      L          P+ I+ L  +K K  A G   +  + E+G+VY
Sbjct: 170 HEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVY 229

Query: 261 IFGDRAVDKMLF-QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            FG      + +  + N    P LI  L    ++  G      +T  G+LYTWG+N NG 
Sbjct: 230 TFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQ 289

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           LG         P  V G  S++ +  VSCG    AA++ +G++ TWG+GG          
Sbjct: 290 LGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGD--------- 340

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              GQLGHGN  D   P  V F +  K ++++CG +H   + E
Sbjct: 341 ---GQLGHGNKSDLYAPRHVEFKQ--KIIKIACGGSHAAFITE 378



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 7/118 (5%)

Query: 29  RWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
            +I++  Q+     WG G  G+LG G+    + P       K  +  +ACGG+H  F+TE
Sbjct: 321 NFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEF--KQKIIKIACGGSHAAFITE 378

Query: 89  TGCVYATGLNDFGQLGISENIGYSLE----PLRISGLK-KEVVQISTGYHHSSAITVD 141
              +Y  G    GQLGI +N+         P  +   K K+VV ++ G  H+ AIT +
Sbjct: 379 DNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 73  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 128

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 129 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 181

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 182 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 240

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 241 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 298

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 299 ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 346

Query: 395 PTIV 398
           P  V
Sbjct: 347 PFTV 350



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/297 (34%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 68  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 125

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 126 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 185

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 186 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 238 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 295

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +V CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 296 KVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 352



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 73  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 121

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 122 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 181

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 182 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 227

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 228 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 266


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 172 GFELKRQSSPQLIKSLLG-IPFTQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V SWG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 146/297 (49%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCN 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L+GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E+++WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
              +   SP+ ++   +  P  QV+ G  H+  ++  G I  WG             +  
Sbjct: 173 IDCNKQASPQLIKS-LTGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 172 GFELKRQSSPQLIKSLLG-IPFTQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 186/364 (51%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +++GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ L+ I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L+  S  +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 -LKRQS--SPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRF 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 150/303 (49%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y   P  I  L   ++VQI+ GY+HS A++   E++ WG+N +GQLGLG +  
Sbjct: 117 GLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 RQ-SSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LD 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  ++ CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 TDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 172 GFELKRQSSPQLIKSLLG-IPFTQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 148/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G   
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWF 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+ ++      P  QV+ G  H+  ++  G I  WG             +  
Sbjct: 173 LDCKKQTSPQLIKS-LVGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 177/381 (46%), Gaps = 49/381 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTL-FLTETGCVYATGL 97
           WG G+ G+LG G  E R  P V +A    +   +A    CG  HT  +  E   +Y+ G 
Sbjct: 44  WGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGW 103

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            DFG+LG   N      P  I  L+   + QI+ G  H  A+TV G ++ WG+N NGQLG
Sbjct: 104 GDFGRLGHG-NSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLG 162

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG     ++P   K++   G+  K  A G E + AVT  G +  WG G  G LG G    
Sbjct: 163 LGNTEDSLLP--QKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------ 270
            L          P  +  + G K+ + A G+ H+  +  +G +Y +G     ++      
Sbjct: 221 RL---------IPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFE 271

Query: 271 --LFQEGNHARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGC 319
             L      A + + IS+    E +           GG     L + G+LY WG N+ G 
Sbjct: 272 DHLVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQ 331

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGH 378
           +G+G  +   SP +V  P +E  V QV+CGW+HT A++E K + +WG G S         
Sbjct: 332 VGVGDNEDHCSPVQVNFP-NEQKVVQVACGWRHTLALTEAKNVFSWGRGTS--------- 381

Query: 379 SSGGQLGHGNDVDYIHPTIVN 399
              GQLGHG  VD   P +++
Sbjct: 382 ---GQLGHGEIVDRNIPKMID 399



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 174/376 (46%), Gaps = 49/376 (13%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  ++ G +H++ L   G V + G  + GQLG  +     +  +  +        ++
Sbjct: 19  ERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDAPGGVA 78

Query: 130 T----GYHHSSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +    G  H++A + +  +LY WG    G+LG G  +    P P  ++ L G+   Q A 
Sbjct: 79  SVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQP--IQALQGVRITQIAC 136

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G    +AVT  G V SWG   +G+LG G  E S+L          P+ I+  EGV+VK+ 
Sbjct: 137 GDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLL----------PQKIQAFEGVRVKMI 186

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTC 301
           AAG  H+A + E+G +Y +G      +   + +    P  +S +   + V+  CG  HT 
Sbjct: 187 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMVLVACGWRHTI 246

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC------------- 348
            ++S G +YT+G ++ G LG G  +    P +++    ++ + Q                
Sbjct: 247 TVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEA-LKDTTISQEEAVELIFFFLGDEGF 305

Query: 349 ---GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
              G    A  ++GK+  WGW            +  GQ+G G++ D+  P  VNF    K
Sbjct: 306 RVGGGIQWALAADGKLYGWGW------------NKFGQVGVGDNEDHCSPVQVNFPNEQK 353

Query: 406 ALQVSCGFNHTGALLE 421
            +QV+CG+ HT AL E
Sbjct: 354 VVQVACGWRHTLALTE 369


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q +CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A+ACG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQ 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   +  CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   A G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 34/353 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  CS F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+ A+   G++Y WG   +GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P++IK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
               + V Q++CG +HT+A   S G+I ++G GG+            GQLG G
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMG 330



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++  ++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y+  P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G V  WG    G+LG   E+       
Sbjct: 177 KQAS-PQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT   + S G +Y++G   NG LG+G+     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKG 343



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           VD  L   G   + R P  I  L   +  +V CG +H+  L+ G E+++WG N+ G LG+
Sbjct: 112 VDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           G      +  ++       P  Q++ G  H+  ++  G +  WG             +  
Sbjct: 172 GYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 220 GQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V IS G  H++A+T +G ++ +G    GQLG    A
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTA 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSN 334


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 184/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q + G+  S+A++   +V SWG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ+S GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 122/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E+++WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 125/384 (32%), Positives = 191/384 (49%), Gaps = 55/384 (14%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGA-HTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +   +  + SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3238 GEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3297

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +E++Q++ G+ HS+ ++ DG+L+ +G    G+LGLG 
Sbjct: 3298 GKLGHG-NSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGN 3356

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
             + K   IP +V  L G    Q   G   ++AV+  G  V S+G G  G+LG G      
Sbjct: 3357 TSNKK--IPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGN----- 3409

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ TP+ +  L G+ VK    G   S  + ++GRV+ FG +R + +   +  NH
Sbjct: 3410 ----STAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTFGQERLIGQPESRSRNH 3465

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L   + E+VV G  H+  LTS GE++ WGSN +G LGIG  +    P  V 
Sbjct: 3466 -NRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARREPCLVT 3524

Query: 336  GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
                                  +GK +   W GS+G          GQLG G+      P
Sbjct: 3525 A--------------------LQGKNVRQVW-GSNG---------DGQLGIGDTNARREP 3554

Query: 396  TIVNF--GENVKALQVSCGFNHTG 417
             +V    G+NV+  Q+S G NH+G
Sbjct: 3555 CLVTDLQGKNVR--QISAGRNHSG 3576



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 146/313 (46%), Gaps = 31/313 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  +ACG  H+  ++  G ++  G  D+G+
Sbjct: 3292 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGR 3351

Query: 103  LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+  N      P R++ L+ ++V Q+  G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 3352 LGLG-NTSNKKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNS 3410

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P +V+ L GI  K+   G + SVA+T  G+V ++   G  RL    ES     
Sbjct: 3411 TAKS--TPQRVDPLCGIGVKKVCCGTQFSVALTKDGRVFTF---GQERLIGQPES----- 3460

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             RS +   P+ +  LE   V+    G  HS  +   G V+ +G     ++   + N  R 
Sbjct: 3461 -RSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWGSNGDGQLGIGDTNARRE 3519

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            P L++                 L        WGSN +G LGIG  +    P  V      
Sbjct: 3520 PCLVT----------------ALQGKNVRQVWGSNGDGQLGIGDTNARREPCLVTD-LQG 3562

Query: 341  SPVDQVSCGWKHT 353
              V Q+S G  H+
Sbjct: 3563 KNVRQISAGRNHS 3575



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 122/282 (43%), Gaps = 30/282 (10%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E YMWG   +GQL    +  + +  PT     S    +Q   G   +  +   G V + G
Sbjct: 3184 EAYMWGGGRHGQLA---ETGRSLLTPTVTPSFSQ--AQQIICGQNCTFVIQANGTVQACG 3238

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 3239 EGSYGRLGQGNSDDL---------HQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEV 3289

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +GD    K+     +  RRP  I  L   E  ++ CG  H+ V+++ G+L+T+G+ + 
Sbjct: 3290 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDY 3349

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
            G LG+G+      PERV        V QV CG  HT A+S      W +G        DG
Sbjct: 3350 GRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSADGNTVWSFG--------DG 3400

Query: 378  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                G+LG GN      P  V+    +   +V CG   + AL
Sbjct: 3401 DY--GKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 134/272 (49%), Gaps = 22/272 (8%)

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GQL      G SL    ++    +  QI  G + +  I  +G +   G+ S G+LG G  
Sbjct: 3194 GQLA---ETGRSLLTPTVTPSFSQAQQIICGQNCTFVIQANGTVQACGEGSYGRLGQGN- 3249

Query: 161  AAKVIPIPTKVECLSGIFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             +  +   T +  L G    Q   + G +  S+A+T  G+V SWG G  G+LGHG     
Sbjct: 3250 -SDDLHQLTIISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGN---- 3304

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S  +  PR I+ L+G ++   A GF HSA +  +G+++ FG+    ++     ++
Sbjct: 3305 -----SDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSN 3359

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERV 334
             + P  ++ L      +V CG  HT  +++ G  ++++G  + G LG+G+     +P+RV
Sbjct: 3360 KKIPERVTALEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRV 3419

Query: 335  QGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
              P     V +V CG + + A++ +G++ T+G
Sbjct: 3420 D-PLCGIGVKKVCCGTQFSVALTKDGRVFTFG 3450


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 172/335 (51%), Gaps = 22/335 (6%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    ++ + CG  HT FL E G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLN- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS +   Q A G+  S+A++ GG + SWG    G+LG G       
Sbjct: 120 NFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +   S   P+ ++ L+G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 173 -MTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRC 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+ V+   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 FPALLKAL-RSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
               + V Q++CG +HT A   S GK+ ++G GG+
Sbjct: 290 ELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGN 324



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 124/283 (43%), Gaps = 39/283 (13%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G   +    G   +  +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGS 112

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           D  +    F+E    R P  I  L   +  +V CG +H+  L+ GG +++WG N  G LG
Sbjct: 113 DGQLGLNNFEEC--IRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLG 170

Query: 322 IG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           +G    SI V    + +QG     P  Q++ G  H+ A++  G +  WG           
Sbjct: 171 LGMTGQSISVPQHLQSLQG----IPFAQIAAGGAHSFALTLSGAVFGWG----------- 215

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             +  GQLG  +  D   P ++    + + + +SCG +HT AL
Sbjct: 216 -RNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAAL 257



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 4/170 (2%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   +S   P    + +      +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++        L  +   + V+ IS G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLG 210
            +V   P KV  L G    Q A G + ++A T   GK+ S+G GG+G+LG
Sbjct: 281 HEV--NPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLG 328



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL     R  P +  A     +  ++CG  HT  LT+ G V+  G   +GQ
Sbjct: 214 WGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           LG   +  + + P ++  L   VV QI+ G  H+ A T   G++  +G   NGQLG    
Sbjct: 274 LG-HNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRST 332

Query: 161 AAKVIPIPTK 170
             +  P P K
Sbjct: 333 CNRKSPAPVK 342


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   +++Q++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 31/282 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           G+G ID     SP+ ++      P  QV+ G  H+  ++  G I  WG            
Sbjct: 170 GLG-IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------ 215

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            +  GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 216 RNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  151 bits (381), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 119/389 (30%), Positives = 176/389 (45%), Gaps = 42/389 (10%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+    +LG    G  +S+  P     F    + +++CG  ++  LTE G VY  G   
Sbjct: 593 WGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGS 652

Query: 100 FGQLGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                +S     SLE    P ++  L  EVV +S GY+HS+A+  +GEL  WG   +GQL
Sbjct: 653 VKNPPLSTLGNGSLEDQLLPTKVESLS-EVVLVSIGYYHSAALKSNGELLTWGCGEDGQL 711

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G    +   IP  V+ ++  +  Q   G + ++ +T  GKV +WG    G+LG G   
Sbjct: 712 GHGDVLNQT--IPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD-- 767

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +    TP L+  LE   +   A G  H A +     V +FG+ A         
Sbjct: 768 -------TQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAA----MGSA 816

Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           N    P ++  L +   E + CG Y T  LT  G++YTWGS +   LG G+      P+ 
Sbjct: 817 NIISVPMMVPALKHLNIERLSCGHYSTAALTECGDVYTWGSGQE--LGHGTNQSELHPKL 874

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G  S+S + Q+SCG +H A +++ GKI T             G    GQLGH    D 
Sbjct: 875 VDGLRSQS-IRQISCGGRHMAFLTDSGKIYTC------------GKDPFGQLGHAQG-DQ 920

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  ++       + VSCG NH  +L +
Sbjct: 921 NKPKKIDSLLKTTFISVSCGENHNASLFD 949


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 183/377 (48%), Gaps = 35/377 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  ++  PV   + +  S+ ALA G  H+L L   G V+A G N FGQ
Sbjct: 61  WGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQ 118

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P+++  L   VV I+ G HHS A+  DG ++ WG N++GQLG     A
Sbjct: 119 LGDGSDA-QSQVPIQVWSLNG-VVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVA 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +V+ LSG+    A  G   S+AV   GKV +WG    G+LG G          
Sbjct: 177 S--PLPVQVQGLSGVVALSA--GSTHSLAVLSDGKVKAWGDNYYGQLGDGS--------- 223

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST  +TP L+  L GVK  +A  G  HS  +  +G V  +G+    ++          P 
Sbjct: 224 STERWTPVLVSSLTGVKSVVA--GTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPV 281

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++  L   + +  G  H+  L S G +  WG+N++G +G G+I    +P +V G      
Sbjct: 282 VVPGLTNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPG---VGR 338

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           +  ++ G  H+ A+    I TW W          G  S GQLG G     + P  V  G+
Sbjct: 339 MKSIAAGGAHSLAMRADGI-TWAW----------GDDSQGQLGDGQSSQQLRPARV-LGQ 386

Query: 403 NVKALQVSCGFNHTGAL 419
            ++ + +  G  H+ AL
Sbjct: 387 RIR-MPLGTGNRHSLAL 402



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 174/378 (46%), Gaps = 43/378 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+   R  PV         +  ++    H+L ++  G V+A G N  G+
Sbjct: 461 WGDNAFGQLGDGTTTQRLLPVQVPGLA--GVDTVSSMHQHSLAVSRDGTVWAWGFNGSGR 518

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   +V ++ G  HS A+  DG ++ WG NSNG LG G    
Sbjct: 519 LGDGTTL-SRLTPVQVPGLS-SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLR 576

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  LSG+    A  G+  S+AV   G V +WG  G G+LG G          
Sbjct: 577 RLSPV--QVPGLSGVVALAAGNGY--SLAVDAQGSVWAWGYNGMGQLGDGT--------- 623

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +T   TP     L GV     AAG  HS  +  +G  + +G    D+    +     R  
Sbjct: 624 TTPRVTPTQAPALSGVVAL--AAGDSHSLALRADGVAWAWGGN--DQGQLGDATTLERST 679

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P+ +  L +   +  G  H+ VL + G   +WG+N  G LG G+  +   P +V GP   
Sbjct: 680 PAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGP--- 736

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           S +  V+ G  H+ A+ S+G +  WG  GS            G+LG G  +    P  V 
Sbjct: 737 SAMKGVAAGGSHSLAVRSDGTVWAWGNNGS------------GELGDGTGLQRPRPVQVQ 784

Query: 400 -FGENVKALQVSCGFNHT 416
             G    A+ VS G NH+
Sbjct: 785 GLGS---AVAVSAGTNHS 799



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 176/380 (46%), Gaps = 41/380 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D+G++G G++  +  PV      +  +K++A GGAH+L +   G  +A G +  GQ
Sbjct: 311 WGNNDHGQVGNGTISQQLTPVQVPGVGR--MKSIAAGGAHSLAMRADGITWAWGDDSQGQ 368

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  ++    L P R+ G ++  + + TG  HS A+  DG ++ WG N+ GQLG G    
Sbjct: 369 LGDGQS-SQQLRPARVLG-QRIRMPLGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLP 426

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+  +V  L+G+ T  A      S+A    G V +WG    G+LG G          
Sbjct: 427 RTLPV--QVPGLAGVHTLSAT--TSHSLAARADGTVWAWGDNAFGQLGDGT--------- 473

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +T    P  +  L GV     ++   HS  +  +G V+ +G     ++   +G    R  
Sbjct: 474 TTQRLLPVQVPGLAGVDT--VSSMHQHSLAVSRDGTVWAWGFNGSGRL--GDGTTLSRLT 529

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     V  G  H+  L + G ++ WG N NG LG G+     SP +V G    
Sbjct: 530 PVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPG---L 586

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           S V  ++ G  ++ A+ ++G +  WG+ G             GQLG G     + PT   
Sbjct: 587 SGVVALAAGNGYSLAVDAQGSVWAWGYNGM------------GQLGDGTTTPRVTPTQAP 634

Query: 400 FGENVKALQVSCGFNHTGAL 419
               V AL  + G +H+ AL
Sbjct: 635 ALSGVVAL--AAGDSHSLAL 652



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 142/291 (48%), Gaps = 21/291 (7%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G AH+L L   G V+A G N +GQLG    I   L P+R+  L   VV ++ GY HS
Sbjct: 42  VAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRL-PVRVQSLD-SVVALAVGYQHS 99

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G  A   +PI  +V  L+G+    A  G   S+A+   
Sbjct: 100 LALRSDGTVWAWGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAA--GDHHSLALLSD 155

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG   ++++   L       P  ++ L GV     +AG  HS  +  
Sbjct: 156 GSVWAWGYNAHGQLG--DDTTVASPL-------PVQVQGLSGVVAL--SAGSTHSLAVLS 204

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G+V  +GD    ++          P L+S L   + VV G +H+  L S G +  WG N
Sbjct: 205 DGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGEN 264

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            +G LGI S      P  V G    + V  ++ G  H+ A+ S+G +  WG
Sbjct: 265 GSGQLGISSTTRRPVPVVVPG---LTNVQALAAGSAHSLALRSDGTVRAWG 312



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 120/378 (31%), Positives = 166/378 (43%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G+  SR  PV        S+ A+A G  H+L L   G V+A G N  G 
Sbjct: 511 WGFNGSGRLGDGTTLSRLTPVQVPGLS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGA 568

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   VV ++ G  +S A+   G ++ WG N  GQLG G    
Sbjct: 569 LGDGTTL-RRLSPVQVPGLSG-VVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTP 626

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +V P  T+   LSG+    A  G   S+A+   G   +WG    G+LG           R
Sbjct: 627 RVTP--TQAPALSGVVALAA--GDSHSLALRADGVAWAWGGNDQGQLGDATT-----LER 677

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST    P L        V   AAG  HS  +  +G    +G+ A  ++          P 
Sbjct: 678 STPAAVPGL------AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPV 731

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +      + V  GG H+  + S G ++ WG+N +G LG G+      P +VQG  S   
Sbjct: 732 QVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSAV- 790

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
              VS G  H+ A+ S+G +  W WGG+          S GQLG G  +    P  V+  
Sbjct: 791 --AVSAGTNHSLAVQSDGTV--WAWGGN----------SQGQLGDGTGITRYVPVRVSGL 836

Query: 402 ENVKALQVSCGFNHTGAL 419
             V A  VS G  H+ AL
Sbjct: 837 NGVMA--VSAGSAHSLAL 852



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 141/294 (47%), Gaps = 20/294 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R+ PV  S    + + A++ G AH+L L   G V+A G N +GQ
Sbjct: 811  WGGNSQGQLGDGTGITRYVPVRVSGL--NGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQ 868

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG + +    L P+++ GL   VV I+ G HHS A+  DG ++ WG N  GQLG G K  
Sbjct: 869  LGDATST-QRLVPIQVPGLTG-VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQ 926

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V  L+G+ +   A G   S+AV   G V +WG    G+LG G          
Sbjct: 927  RSPPV--QVPGLAGMVS--VAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGT--------- 973

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +T    P  I    GV   IAAA   HS  +  +G V+ +G     ++     +  + P+
Sbjct: 974  TTQRLLPVPISSSSGV---IAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPT 1030

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
              S       +  G  H+  L S G ++ WG   +G LG G + +   P  V G
Sbjct: 1031 PSSVPNGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRLVPAGVSG 1084



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 159/357 (44%), Gaps = 35/357 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG GS      P+    +  + + A+A G  H+L L   G V+A G N  GQ
Sbjct: 111 WGDNFFGQLGDGSDAQSQVPI--QVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQ 168

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+++ GL   VV +S G  HS A+  DG++  WG N  GQLG G    
Sbjct: 169 LGDDTTVASPL-PVQVQGLSG-VVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTE 226

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+G+  K    G   S+A+   G V +WG  GSG+         LG   
Sbjct: 227 RWTPV--LVSSLTGV--KSVVAGTFHSLALCSDGTVRAWGENGSGQ---------LGISS 273

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P ++  L    V+  AAG  HS  +  +G V  +G+    ++     +    P 
Sbjct: 274 TTRRPVPVVVPGL--TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPV 331

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +   + +  GG H+  + + G  + WG +  G LG G       P RV G     P
Sbjct: 332 QVPGVGRMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVLGQRIRMP 391

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
              +  G +H+ A+ ++G +  W            G ++ GQLG G D+    P  V
Sbjct: 392 ---LGTGNRHSLALHADGTVWAW------------GVNTAGQLGDGTDLPRTLPVQV 433



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WGN   G LG G+   R RPV        S  A++ G  H+L +   G V+A G N  GQ
Sbjct: 761  WGNNGSGELGDGTGLQRPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQ 818

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    I   + P+R+SGL   V+ +S G  HS A+  DG ++ WG N  GQLG      
Sbjct: 819  LGDGTGITRYV-PVRVSGLNG-VMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQ 876

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +++PI  +V  L+G+ +  A  G   S+AV   G V +WG    G+LG G +       R
Sbjct: 877  RLVPI--QVPGLTGVVSIAA--GTHHSLAVRSDGTVWAWGYNFYGQLGDGTK-----IQR 927

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            S     P L   +        AAG  HS  +  NG V+ +G    +     +G   +R  
Sbjct: 928  SPPVQVPGLAGMVS------VAAGTYHSLAVHSNGTVWAWGYN--NHGQLGDGTTTQR-- 977

Query: 283  LISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  +P S           +H+ V+ + G ++ WGSN    LG GS      P     P 
Sbjct: 978  -LLPVPISSSSGVIAAAANWHSLVVRTDGTVWGWGSNNASQLGDGSTSDRKMPTPSSVPN 1036

Query: 339  SESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
                V  +S G  H+ A+ S+G +  WG+G S
Sbjct: 1037 G---VRSISSGANHSLALRSDGTVWAWGFGNS 1065



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 161/358 (44%), Gaps = 37/358 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P    A     + ALA G +H+L L   G  +A G ND GQ
Sbjct: 611 WGYNGMGQLGDGTTTPRVTPTQAPALS--GVVALAAGDSHSLALRADGVAWAWGGNDQGQ 668

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG +  +  S  P  + GL   VV ++ G  HS  +  DG    WG N+ GQLG G   +
Sbjct: 669 LGDATTLERS-TPAAVPGL-AHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--S 724

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+P +V   S +  K  A G   S+AV   G V +WG  GSG LG G      G  R
Sbjct: 725 TLHPVPVQVPGPSAM--KGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGT-----GLQR 777

Query: 223 STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 PR + +++G+   +A +AG  HS  +  +G V+ +G  +  ++    G     P
Sbjct: 778 ------PRPV-QVQGLGSAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVP 830

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S L     V  G  H+  L S G ++ WG N  G LG  +      P +V G    +
Sbjct: 831 VRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPG---LT 887

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            V  ++ G  H+ A+ S+G +  W            G++  GQLG G  +    P  V
Sbjct: 888 GVVSIAAGTHHSLAVRSDGTVWAW------------GYNFYGQLGDGTKIQRSPPVQV 933



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 132/294 (44%), Gaps = 33/294 (11%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           Q++ G  HS  +  DG ++ WG N+ GQLG G    + +P+  +V+ L  +     A+G+
Sbjct: 41  QVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPV--RVQSLDSVVAL--AVGY 96

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           + S+A+   G V +WG    G+LG G ++             P  +  L GV V I AAG
Sbjct: 97  QHSLALRSDGTVWAWGDNFFGQLGDGSDA---------QSQVPIQVWSLNGV-VAI-AAG 145

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  +  +G V+ +G  A  ++       +  P  +  L     +  G  H+  + S 
Sbjct: 146 DHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSGVVALSAGSTHSLAVLSD 205

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G++  WG N  G LG GS     +P  V    S + V  V  G  H+ A+ S+G +  WG
Sbjct: 206 GKVKAWGDNYYGQLGDGSSTERWTPVLVS---SLTGVKSVVAGTFHSLALCSDGTVRAWG 262

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             GS            GQLG  +      P +V    NV+AL  + G  H+ AL
Sbjct: 263 ENGS------------GQLGISSTTRRPVPVVVPGLTNVQAL--AAGSAHSLAL 302



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 32/256 (12%)

Query: 168 PTKVECL---SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           P+++E       +  +Q A G   S+ +   G V +WG    G+LG G            
Sbjct: 25  PSRIEAALTPPPLGHEQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGT---------GI 75

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++  P  ++ L+   V   A G+ HS  +  +G V+ +GD    ++       ++ P  +
Sbjct: 76  TQRLPVRVQSLD--SVVALAVGYQHSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQV 133

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
             L     +  G +H+  L S G ++ WG N +G LG  +      P +VQG    S V 
Sbjct: 134 WSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG---LSGVV 190

Query: 345 QVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +S G  H+ A +S+GK+  WG          D +   GQLG G+  +   P +V+    
Sbjct: 191 ALSAGSTHSLAVLSDGKVKAWG----------DNYY--GQLGDGSSTERWTPVLVSSLTG 238

Query: 404 VKALQVSCGFNHTGAL 419
           VK+  V  G  H+ AL
Sbjct: 239 VKS--VVAGTFHSLAL 252



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 18/132 (13%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           E+V  G  H+ +L S G ++ WG N  G LG G+      P RVQ   S   V  ++ G+
Sbjct: 40  EQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQ---SLDSVVALAVGY 96

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           +H+ A+ S+G +  W WG +   F        GQLG G+D     P  V     V A  +
Sbjct: 97  QHSLALRSDGTV--WAWGDNF--F--------GQLGDGSDAQSQVPIQVWSLNGVVA--I 142

Query: 410 SCGFNHTGALLE 421
           + G +H+ ALL 
Sbjct: 143 AAGDHHSLALLS 154


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 121/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  +  LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYE----- 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           + + TS   P++IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 175 YKKQTS---PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G   +   
Sbjct: 290 ELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTGTTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQTS-PQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWI 346

Query: 337 PFS 339
           PFS
Sbjct: 347 PFS 349



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 122/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNH--ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G       SP+ ++      P  Q++ G  H+  ++  G I  W            G + 
Sbjct: 172 GYEYKKQTSPQMIKSLLG-IPFAQIAAGGAHSFVLTLSGAIFGW------------GRNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  +D D   PT++    + K + + CG +HT AL
Sbjct: 219 FGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAAL 257


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 167/343 (48%), Gaps = 30/343 (8%)

Query: 92  VYATGLNDFGQLGIS-ENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGK 149
           VYA G  +FGQLG++ EN  YS  P  +  L  + ++++      S A++ DG++Y WGK
Sbjct: 45  VYAWGYGNFGQLGLANENNQYS--PQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGK 102

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  G LG     +  +  P  VE L  I  KQ + G     A++  G++ +WG    G+L
Sbjct: 103 NKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHGKL 162

Query: 210 GH--GQESSILGFLRSTSEYT-------PRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           GH   Q+S+ +   R    Y        P  ++ L G+K K  + G   +  + ENG VY
Sbjct: 163 GHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVY 222

Query: 261 IFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            FG+    ++ +Q E     +P  I  L     + CG   +  ++S G++YTWG+N++G 
Sbjct: 223 SFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINIDCGQQFSAAVSSSGKVYTWGNNDHGQ 282

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           LG         P +V G F  + +  +SCG    AA+S EGK+ TWG+G           
Sbjct: 283 LGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEGKLFTWGYGND--------- 332

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              GQLGH N  D   P  + F E  K ++V CG  HT  L +
Sbjct: 333 ---GQLGHSNRNDLYAPKQIEFKE--KIIKVDCGGTHTAFLTQ 370



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 207/416 (49%), Gaps = 49/416 (11%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
            + T  ++    WG G++G+LGL +  +++ P         ++  +    + ++ L++ G
Sbjct: 36  FTDTPPQKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDG 95

Query: 91  CVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
            VY  G N  G LG  +   +++ +P  +  L+  ++ QIS G  H +AI+ DGELY WG
Sbjct: 96  KVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWG 155

Query: 149 KNSNGQLG--LGKKAAKV--------------IPIPTKVECLSGIFTKQAALGFEQSVAV 192
              +G+LG  + +K+ KV                +PTKV+ L+GI  KQ + G + +V +
Sbjct: 156 NKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVL 215

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V S+G    G+LG+  E         T  + P+ I +L+ + + I   G   SA 
Sbjct: 216 TENGEVYSFGNSMKGQLGYQSE--------ETGNFQPKKIPDLQNI-INI-DCGQQFSAA 265

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           +  +G+VY +G+    ++   +  +  RP+ ++    ++   + CG      L++ G+L+
Sbjct: 266 VSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAALSNEGKLF 325

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
           TWG   +G LG  + + L++P++++  F E  + +V CG  HTA +++   L        
Sbjct: 326 TWGYGNDGQLGHSNRNDLYAPKQIE--FKEKII-KVDCGGTHTAFLTQNNQLYLF----- 377

Query: 371 GTFSEDGHSSGGQLGHGNDVD-----YIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G  + GQLG G +++        P IV F + +K + V+CG  +T A+ E
Sbjct: 378 ------GRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ L+ I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
                 +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ L+ I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQAS-PKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 117/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
                 +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 LDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|452821114|gb|EME28148.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 424

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 210/439 (47%), Gaps = 46/439 (10%)

Query: 9   MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLG-LGSLE---------S 58
           M  YY K++I     +   +    S  +R     WGN D G  G L S E         S
Sbjct: 1   MFSYYGKKNILFIRFIYHNRYSYKSKGRRSIVYAWGNSDGGWTGHLPSEEYEDHVSGATS 60

Query: 59  RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEP 115
            +RP + ++ +  S++ +ACG   TLF+T+ G VY++G+  +GQLG   + E  G +L  
Sbjct: 61  VYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL-- 118

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
             I  + ++V+  + G  HS  +T  G LY  G    G+LGLG   ++ +  P  VE L+
Sbjct: 119 --IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESLA 175

Query: 176 GIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSEY 227
               K  + A G   S+A++  GKV S+G+   G LGHG+    + FL          E 
Sbjct: 176 REEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNMET 234

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +PRLI+ LE  +++  + G  H+  I++ G  + +G             +  +P  +  L
Sbjct: 235 SPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFHL 294

Query: 288 PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESPV 343
           P   +++V GG HT  LT GG+++ WG N  GCLG+G         R+       ++ P+
Sbjct: 295 PGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEPI 354

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF-- 400
             ++ GW  + A+ SEG + +WG           GH+  G LG G + D   P  +    
Sbjct: 355 QWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVAIQNEQ 402

Query: 401 GENVKALQVSCGFNHTGAL 419
           GE ++  ++  GFN+  A+
Sbjct: 403 GEPLQVDRIYAGFNYAIAV 421


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 34/354 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C+ F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+  +   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS +   Q A G+  S+A++ G +V SWG    G+LG G +     
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
               + V Q++CG +HT+A   S G+I ++G GG+            GQLG G+
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMGS 331



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++ A++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y+  P  I  L   ++VQ++ GY+HS A++   E++ WG+N +GQLGLG    
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S A+T  G V  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            + +L      ++ CG  HT   + S G +Y++G   NG LG+GS     SP  V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  +V CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    SP+ ++      P  Q++ G  H+ A++  G +  WG             + 
Sbjct: 172 GYDLKKQTSPQLIKSLLG-IPFGQIAAGGAHSFALTLSGAVFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  L+ +  P +  +        +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V IS G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG  H+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 180/354 (50%), Gaps = 34/354 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C+ F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++      P ++  L  + +V +S G  H+  +   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKS---RKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +   +P  ++ LS +   Q A G+  S+A++ G +V SWG    G+LG G +     
Sbjct: 120 GTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+LIK L G+     AAG  HS  +  +G V+ +G     ++   + N   
Sbjct: 177 -----KQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
               + V Q++CG +HT+A   S G+I ++G GG+            GQLG G+
Sbjct: 290 ELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGN------------GQLGMGS 331



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/299 (34%), Positives = 147/299 (49%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR RP    A +  ++ A++CG AHTL L + G VYA G    GQL
Sbjct: 59  GCNDLGQLG--HEKSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+     Y+  P  I  L   ++VQ++ GY+HS A++   E++ WG+N +GQLGLG    
Sbjct: 117 GLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S A+T  G V  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+   + G  H+A + + G V+ FG     ++      H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            + +L      ++ CG  HT   + S G +Y++G   NG LG+GS     SP  V+G F
Sbjct: 287 KVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNF 345



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 125/279 (44%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P +         +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWG-FA 111

Query: 267 VDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G   + R P  I  L   +  +V CG YH+  L+ G E+++WG N++G LG+
Sbjct: 112 ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGL 171

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G  +    SP+ ++      P  Q++ G  H+ A++  G +  WG             + 
Sbjct: 172 GYDLKKQTSPQLIKSLLG-IPFGQIAAGGAHSFALTLSGAVFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++    + K + +SCG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAAL 257



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  L+ +  P +  +        +A GGAH+  LT +G V+  G N FG
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFG 220

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V IS G  H++A+T +G ++ +G    GQLG     
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTG 280

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 281 HEI--NPRKVFELMGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSN 334


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 147/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  Q++ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQIAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++  G+   WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 148/300 (49%), Gaps = 22/300 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++ +GE + WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+  GE + WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  WG             + 
Sbjct: 173 -IDCKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWG------------RNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G   +   
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTGTTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           G      +   V       P  Q++ G  H+  ++  G I  WG             +  
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G   +   
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTGTTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           G      +   V       P  Q++ G  H+  ++  G I  WG             +  
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+   G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343

Query: 337 ---PFS-ESPVD 344
              P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  W            G + 
Sbjct: 173 -IDYKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGW------------GRNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 177/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +  L  + +V +S G  H+ A+   G++Y WG  ++GQLGL  
Sbjct: 64  GQLGHEKA---RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL-P 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + I +P  ++ LS I   Q A G+  S+A++ G +V SWG    G+LG G E     
Sbjct: 120 GTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P +IK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  +++VV   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G   +   
Sbjct: 290 ELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN------------GQLGTGTTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/303 (33%), Positives = 147/303 (48%), Gaps = 19/303 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    ++R RP    A +  ++ A++CG AHTL L + G VYA GL   GQL
Sbjct: 59  GCNDLGQLG--HEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+         P  I  L + ++VQ++ GY+HS A++   E++ WG+N  GQLGLG +  
Sbjct: 117 GLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   ++       
Sbjct: 177 KQNS-PHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   KV     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG--- 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG G+     SP  V+G   
Sbjct: 287 KVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNWL 346

Query: 337 PFS 339
           P+S
Sbjct: 347 PYS 349



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 118/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +   P  +  L+   +   + G  H+  +++ G+VY +G  A
Sbjct: 64  GQLGHEK-----------ARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWG-LA 111

Query: 267 VDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D  L   G     R P  I  L   +  +V CG YH+  L+ G E+++WG N+ G LG+
Sbjct: 112 TDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGL 171

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           G      +   V       P  Q++ G  H+  ++  G I  WG             +  
Sbjct: 172 GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  +D D   PT++      K + + CG +HT AL
Sbjct: 220 GQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG    GQ+GL  
Sbjct: 64  GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I +P  ++ LS +   Q A G   S+A++    + SWG    G+LG G       
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 VPALLKSL-RSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G+ ++   
Sbjct: 290 ELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGTGSTINRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G   +GQ+
Sbjct: 59  GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ D +++ WG+N  GQLGLG +  
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHDK-----------SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAV 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG +H+  L+   ++++WG N+ G LG+G
Sbjct: 113 YGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             I    +P  ++   S  P   ++ G  H+ A++  G I  WG             +  
Sbjct: 173 LEIKKECAPRHIKS-LSGIPFAHIAAGGGHSFALTISGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAAL 257


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/337 (33%), Positives = 168/337 (49%), Gaps = 21/337 (6%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
           G VY+ G  + GQLG+ +       P+ +  LK K VVQ++ G  H+  ++ DG +Y WG
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQD-RPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWG 65

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           +  +G+LG G    K +P    VE L G    QA  G   + AVT  G++ +WG G  G+
Sbjct: 66  RGDDGRLGHGDNGWKYVP--RIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGK 123

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           LGHG ES            TP ++K L  EG +V   A G  H+  + + G+VY +GD+ 
Sbjct: 124 LGHGNESG---------HPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKE 174

Query: 267 VDKMLFQEGN-HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              +     + H   P ++  L      +V   G+HT  LT+ GE++TWG  + G LG G
Sbjct: 175 NGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHG 234

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 382
                  P  V+    +  V  V+CG  H+AAI   G++ TWG GG HG     G+   G
Sbjct: 235 MERNQMVPRMVEALMGKR-VGHVACGGFHSAAILDSGELYTWG-GGEHGQVYTFGNGDHG 292

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +LGHG+      PT+V     +  ++V+    HT AL
Sbjct: 293 KLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 163/330 (49%), Gaps = 26/330 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LGLG    + RPV+  A +   +  +ACG  HT+ L+E G VY  G  D G+
Sbjct: 12  WGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLSEDGAVYTWGRGDDGR 71

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +N G+   P  +  L+ + +VQ + G +H++A+T  GELY WG    G+LG G ++
Sbjct: 72  LGHGDN-GWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNES 130

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P   K     G    Q A G   +V +T  GKV +WG   +G +GH          
Sbjct: 131 GHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWGDKENGVVGHTNADG----- 185

Query: 222 RSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               +Y PR+++ L+   V ++AA GF H+A +   G ++ +G+    ++      +   
Sbjct: 186 ---HQYLPRMLESLQAKTVTQVAACGF-HTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC-----------LGIGSIDV 327
           P ++  L       V CGG+H+  +   GELYTWG  E+G            LG G +  
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +  P  V G   +  V +V+   +HTAA++
Sbjct: 302 VSVPTLVAG-LVKMHVVKVASYNEHTAALA 330



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 137/289 (47%), Gaps = 32/289 (11%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           V G +Y WG+  +GQLGLG    +  P+   V+ L      Q A G   +V ++  G V 
Sbjct: 5   VAGLVYSWGRGEDGQLGLGDTNDQDRPVL--VDALKSKGVVQVACGSGHTVVLSEDGAVY 62

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +WG G  GRLGHG             +Y PR+++ LEG ++  A  G  H+A + + G +
Sbjct: 63  TWGRGDDGRLGHGDNG---------WKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGEL 113

Query: 260 YIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           Y +G     K+    GN +  P+      L  +     ++ CG  HT VLT  G++YTWG
Sbjct: 114 YTWGGGMYGKL--GHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKVYTWG 171

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQV-SCGWKHTAAISEGKILTWGWGGSHGT 372
             ENG +G  + D      R+        V QV +CG+   A  + G+I TWG     G 
Sbjct: 172 DKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWG----EGK 227

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           F        G+LGHG + + + P +V      +   V+CG  H+ A+L+
Sbjct: 228 F--------GRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 182/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+   G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-L 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 173 -IDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  ++++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 FPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 153/312 (49%), Gaps = 26/312 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---K 159
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG   K
Sbjct: 117 GLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYK 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K A     P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+    
Sbjct: 177 KQAS----PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---- 228

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H  
Sbjct: 229 -----DRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 280 RPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + +L  S   ++ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343

Query: 337 ---PFS-ESPVD 344
              P++ + P D
Sbjct: 344 NWFPYNGQCPTD 355



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 120/279 (43%), Gaps = 31/279 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            ID     SP+ ++      P  QV+ G  H+  ++  G I  W            G + 
Sbjct: 173 -IDYKKQASPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGW------------GRNK 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P ++      K + + CG +HT AL
Sbjct: 219 FGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAAL 257


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  WG             +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWG------------RNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 188/389 (48%), Gaps = 43/389 (11%)

Query: 43  WGNGDYGRLGLG-------------SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET 89
           WG+ D+GR G G               E   +PV+ +      +K +ACGGAH++ +TE+
Sbjct: 67  WGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVTES 122

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G +   GLND GQLG+  N+  + E   + G  + +  ++ G+ H+ A +  G+LY WG 
Sbjct: 123 GRLLTCGLNDNGQLGLG-NLENASEFEEVKG-TESIADVAAGFWHTLAASKKGKLYAWGS 180

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLG    A K+   P ++  L     KQ A G   S+A+T  G+V +WG G  GRL
Sbjct: 181 NKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDGEVYTWGFGAHGRL 240

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG          +  E+ P+ ++ L G  +    AGF +S+ +  +G+V+++G      
Sbjct: 241 GHGS---------TEDEFMPKRVEALVGENISSIHAGFEYSSAVSTSGKVFVWGYGHF-Y 290

Query: 270 MLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SID 326
           +L Q     +   ++   P S  ++  G +H   ++  G L+TWG   +G LG G  S +
Sbjct: 291 VLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHATHGPLGHGLKSPN 350

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
           ++  P  +  P       QV+CG +HT  ++          G+   FS       GQLG 
Sbjct: 351 IILEPTVLDAPAQLQNSKQVACGSQHTLVVT----------GTGDVFSFGL-GGQGQLGL 399

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           G+D+D+  P  +         QV+CG  H
Sbjct: 400 GSDLDHYEPKQIPRFVGKSLRQVACGLFH 428



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 24/242 (9%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           G EQ V + G   + SWG+   GR G G   ++ I   ++   E   + +  L    +K 
Sbjct: 51  GREQKVTLAGARTLWSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPV--LPAKLIKK 108

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            A G  HS  + E+GR+   G     ++      +A     +       +V  G +HT  
Sbjct: 109 VACGGAHSMIVTESGRLLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLA 168

Query: 303 LTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
            +  G+LY WGSN++G LG    ++ +   P+ +     ++P+ QV+CG  H+ A++ +G
Sbjct: 169 ASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEIL-LLRDAPIKQVACGSYHSMALTKDG 227

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTG 417
           ++ TWG+G              G+LGHG+  D   P  V    GEN+ ++    GF ++ 
Sbjct: 228 EVYTWGFGAH------------GRLGHGSTEDEFMPKRVEALVGENISSIH--AGFEYSS 273

Query: 418 AL 419
           A+
Sbjct: 274 AV 275


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 181/364 (49%), Gaps = 40/364 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA ++H + ++ CG  HT+  +++   VY+ G  DFG
Sbjct: 35  WGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFG 94

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      PL I  L   ++ QI+ G  H  A+T+DGE+  WG+N NGQLGLG  
Sbjct: 95  RLG-HGNSSDLFTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNT 153

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +  +P K++   GI  K  A G E + AVT  G +  W  G   + G    +  L F
Sbjct: 154 EDSL--VPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRL-F 209

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           L+   EY    +++++G  ++   +  L S        +Y++ ++      ++ G     
Sbjct: 210 LK---EYLC-CVRDVDGAVMQPHISFLLWSI-------IYLWMEQIWPTRTWRLGG---S 255

Query: 281 PSLISKLPYSEEV----VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           P  ++    S       + GG+ HT  LTS G+LY WG N+ G +G+G+     SP +V+
Sbjct: 256 PCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVR 315

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            P  +  V QVSCGW+HT A++E   +  WG G            + GQLG G  +D   
Sbjct: 316 FP-DDQKVVQVSCGWRHTLAVTERNNVFAWGRG------------TNGQLGIGESLDRNS 362

Query: 395 PTIV 398
           P I+
Sbjct: 363 PNII 366



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 168/366 (45%), Gaps = 64/366 (17%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           ++ G +H++ L     V + G  + GQLG  +    S  P ++S L + ++V ++ G  H
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRS-SPTQLSALDEHQIVSVTCGADH 74

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           + A +    E+Y WG    G+LG G  +    P+P K   L G+  KQ A G    +AVT
Sbjct: 75  TVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKA--LHGVMIKQIACGDSHCLAVT 132

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG   +G+LG G     L          P+ I+  EG+++K+ AAG  H+A +
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSL---------VPQKIQAFEGIRIKMVAAGAEHTAAV 183

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE----- 308
            E+G +Y +     D  +++ G   R   L  K     E +C     CV    G      
Sbjct: 184 TEDGDLYGW-----DGKIWKFGISDRNDRLFLK-----EYLC-----CVRDVDGAVMQPH 228

Query: 309 --------LYTWGSN----ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
                   +Y W           LG GS   L + +R    F      Q+S GW+HT  +
Sbjct: 229 ISFLLWSIIYLWMEQIWPTRTWRLG-GSPCFLTNWKRSATAF----FSQISGGWRHTMPL 283

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S+GK+  WGW            +  GQ+G GN++D   P  V F ++ K +QVSCG+ H
Sbjct: 284 TSDGKLYGWGW------------NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRH 331

Query: 416 TGALLE 421
           T A+ E
Sbjct: 332 TLAVTE 337



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 64/257 (24%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           ++   ++V+ IS G  HS A+     +  WG+  +GQLG G   A+    PT++  L   
Sbjct: 6   VTPPPRKVLIISAGASHSVALLSGEVVCSWGRGEDGQLGHGD--AEDRSSPTQLSALDEH 63

Query: 178 FTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                  G + +VA +    +V SWG G  GRLGHG  S +         +TP  IK L 
Sbjct: 64  QIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDL---------FTPLPIKALH 114

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
           GV +                                                  +++ CG
Sbjct: 115 GVMI--------------------------------------------------KQIACG 124

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             H   +T  GE+ +WG N+NG LG+G+ +    P+++Q  F    +  V+ G +HTAA+
Sbjct: 125 DSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQA-FEGIRIKMVAAGAEHTAAV 183

Query: 357 SEGKILTWGWGGSHGTF 373
           +E   L +GW G    F
Sbjct: 184 TEDGDL-YGWDGKIWKF 199



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 4/104 (3%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTG 131
              ++ G  HT+ LT  G +Y  G N FGQ+G+  N+     P+++     ++VVQ+S G
Sbjct: 270 FSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLD-QCSPVQVRFPDDQKVVQVSCG 328

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + H+ A+T    ++ WG+ +NGQLG+G+   +    P  +E LS
Sbjct: 329 WRHTLAVTERNNVFAWGRGTNGQLGIGESLDR--NSPNIIEALS 370



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 85/188 (45%), Gaps = 19/188 (10%)

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVC 295
           KV I +AG  HS  +  +G V     R  D  L   +      P+ +S L   +   V C
Sbjct: 12  KVLIISAGASHSVAL-LSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTC 70

Query: 296 GGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G  HT   + S  E+Y+WG  + G LG G+   L +P  ++       + Q++CG  H  
Sbjct: 71  GADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKA-LHGVMIKQIACGDSHCL 129

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
           A++ +G++ +WG             +  GQLG GN  D + P  +   E ++   V+ G 
Sbjct: 130 AVTMDGEVQSWG------------RNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGA 177

Query: 414 NHTGALLE 421
            HT A+ E
Sbjct: 178 EHTAAVTE 185



 Score = 45.1 bits (105), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G+G+   +  PV     +   +  ++CG  HTL +TE   V+A G    GQ
Sbjct: 292 WGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351

Query: 103 LGISENIGYS----LEPLRISGLKKEVVQIST 130
           LGI E++  +    +E L + G   + ++ S+
Sbjct: 352 LGIGESLDRNSPNIIEALSVDGASGQHIESSS 383


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG    GQ+GL  
Sbjct: 64  GQLGHDKS---RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGLS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I +P  ++ LS +   Q A G   S+A++    + SWG    G+LG G       
Sbjct: 120 TAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            L    E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 173 -LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDETDRN 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S +   +P +V  
Sbjct: 232 VPALLKSL-RSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G+I ++G GG+            GQLG G+ ++   
Sbjct: 290 ELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGTGSTINRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G   +GQ+
Sbjct: 59  GCNDLGQLGHD--KSRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ D +++ WG+N  GQLGLG +  
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KECA-PRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLTDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 228 -TDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKG 343



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +V V   G V + G    
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G   
Sbjct: 64  GQLGHDK-----------SRRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAV 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L     + R P  I  L   +  +V CG +H+  L+   ++++WG N+ G LG+G
Sbjct: 113 YGQIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             I    +P  ++   S  P   ++ G  H+ A++  G I  WG             +  
Sbjct: 173 LEIKKECAPRHIKS-LSGIPFAHIAAGGGHSFALTISGAIFGWG------------RNKF 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAAL 257


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT   + S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 170/320 (53%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4033 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4092

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4093 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4151

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G+   Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4152 TSNK--KLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGN----- 4204

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4205 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4260

Query: 278  ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP L+  L   + +++  G  HT  L++ GE+Y WGSN  G LG+G  + +  P  V 
Sbjct: 4261 -NRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVT 4319

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   + Q+S G  H+AA
Sbjct: 4320 A-LQGKNIRQISAGRCHSAA 4338



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 166/335 (49%), Gaps = 31/335 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +G+LG   N      P  I G    K VV +S GY HS+A+T DGELY WG+   G+LG 
Sbjct: 487 YGKLGHG-NSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGH 545

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
           G   ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + 
Sbjct: 546 GDSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNR 601

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +         Y P++++ L+G+  +   AG   S  +   G+VY +G  A       E  
Sbjct: 602 V---------YKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT 652

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
            A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++
Sbjct: 653 -ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKK 711

Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
           V G      + Q+S G  H    TA   + +++ W
Sbjct: 712 VSG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4087 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4146

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+   + Q++ G +H+ A++ DG L + +G    G+LGLG  
Sbjct: 4147 LGLGNTSNKKL-PERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNS 4205

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4206 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4255

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+L+  L G+ +   A G  H+  +  +G VY +G  +  ++     NH R 
Sbjct: 4256 -RARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVRE 4314

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4315 PTLVTAL 4321



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 173/390 (44%), Gaps = 46/390 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3982 LWGAGRHGQLAEAG-RNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4038

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4039 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4097

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4098 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4154

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG+ +   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4155 --------KKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLGLGNST 4206

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+ V
Sbjct: 4207 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQLV 4266

Query: 335  Q---GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
                G F    +D ++ G +HT A+S  G++  WG             +S GQLG G+  
Sbjct: 4267 PVLLGIF----IDDIAVGAEHTLALSASGEVYAWG------------SNSEGQLGLGHTN 4310

Query: 391  DYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                PT+V    G+N++  Q+S G  H+ A
Sbjct: 4311 HVREPTLVTALQGKNIR--QISAGRCHSAA 4338



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 130/283 (45%), Gaps = 32/283 (11%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    +A + + IP+     S    +Q   G   +  +   G VL+ G
Sbjct: 3979 DVFLWGAGRHGQLA---EAGRNVMIPSGAGSFSQ--AQQVICGQNCTFVIQANGTVLACG 4033

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4034 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4084

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4143

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
             G LG+G+      PERV        + QV+CG  HT A+S    L W +G        D
Sbjct: 4144 YGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGSLVWAFG--------D 4194

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4195 GDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+FT++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 137/314 (43%), Gaps = 38/314 (12%)

Query: 121 LKKEVVQISTGYHHSSA------------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
           L +EV Q+++ Y  + A            ++   E+Y+WG NS+ QL  G +  + I  P
Sbjct: 339 LFEEVCQMASDYSRTCASPDSIQSGENPVVSETCEVYVWGSNSSHQLVEGTQ--EKILQP 396

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
               C S   T +A  G   +  ++  G V + G G  GRLG G +S+    L+  +   
Sbjct: 397 KLAPCFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEP 453

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            R IK     KV  +     H+      G V+ +GD    K+     +  + P LI    
Sbjct: 454 HRSIK-----KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTL 508

Query: 289 YSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             + VVC   GY H+  +T  GELYTWG  + G LG G  +  + P  V+     S V +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGE 565

Query: 346 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
           VSCG  HT A+S+     W +GG             G+LGHG+      P +V   + + 
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEALQGMF 615

Query: 406 ALQVSCGFNHTGAL 419
             +V  G   + AL
Sbjct: 616 TRKVCAGSQSSLAL 629



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +    + +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+     ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 156/304 (51%), Gaps = 18/304 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC-VYATGLNDFG 101
           WG G+ G+LG G  E R  P V S F+  ++ ++ CG  HT   +E    VY+ G  DFG
Sbjct: 37  WGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFG 96

Query: 102 QLGISENIG-YSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   +   ++ +P++ + GLK  + QI+ G  H  A+T+ GE+  WG+N NGQLGLG 
Sbjct: 97  RLGHGNSSDVFTPQPVKALQGLK--IKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGT 154

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               ++P   K++    +  K  A G E + AVT  G +  WG G  G LG G  +  L 
Sbjct: 155 TEDSLLP--QKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL- 211

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  +EG K+ + A G+ H+  + ++G +Y +G     ++   +     
Sbjct: 212 --------LPEKVSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHL 263

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  S   ++  G  HT  LTS G+LY WG N+ G +G+G+ D   SP +V  P
Sbjct: 264 VPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFP 323

Query: 338 FSES 341
            SE+
Sbjct: 324 GSEN 327



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/331 (31%), Positives = 163/331 (49%), Gaps = 32/331 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++ G +H++ L     + + G  + GQLG  +     L P  +SG     +  +  G  H
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAED-RLVPTVLSGFDAPAITSVICGADH 76

Query: 135 SSAITVDG-ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           ++A + D  ++Y WG    G+LG G  +    P P K   L G+  KQ A G    +AVT
Sbjct: 77  TTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA--LQGLKIKQIACGDSHCLAVT 134

Query: 194 GGGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
             G+V SWG   +G+LG G  E S+L          P+ I+  E V VK+ AAG  H+A 
Sbjct: 135 MAGEVQSWGRNQNGQLGLGTTEDSLL----------PQKIQAFESVCVKMIAAGAEHTAA 184

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELY 310
           + E+G +Y +G      +   + N    P  +S +   + V+  CG  HT  ++  G LY
Sbjct: 185 VTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSGNLY 244

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           T+G ++ G LG G  +    P +V+    +S + Q+S GW+HT A+ SEGK+  WGW   
Sbjct: 245 TYGWSKYGQLGHGDFEDHLVPHKVEA-LKDSTISQISGGWRHTMALTSEGKLYGWGW--- 300

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
                    +  GQ+G GN+ D+  P  V+F
Sbjct: 301 ---------NKFGQVGVGNNDDHSSPGQVSF 322



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 141/305 (46%), Gaps = 36/305 (11%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + VV +S G  HS A+     L  WG+  +GQLG G    ++  +PT +           
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRL--VPTVLSGFDAPAITSV 70

Query: 183 ALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             G + + A +    +V SWG G  GRLGHG  S +         +TP+ +K L+G+K+K
Sbjct: 71  ICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDV---------FTPQPVKALQGLKIK 121

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC------ 295
             A G  H   +   G V  +G     ++    G      SL+ +   + E VC      
Sbjct: 122 QIACGDSHCLAVTMAGEVQSWGRNQNGQL----GLGTTEDSLLPQKIQAFESVCVKMIAA 177

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  HT  +T  G+LY WG    G LG+G  +    PE+V     E  V  V+CGW+HT  
Sbjct: 178 GAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV-LVACGWRHTIT 236

Query: 356 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           +S+ G + T+GW            S  GQLGHG+  D++ P  V   ++    Q+S G+ 
Sbjct: 237 VSDSGNLYTYGW------------SKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWR 284

Query: 415 HTGAL 419
           HT AL
Sbjct: 285 HTMAL 289



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 19/187 (10%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLIS--KLPYSEEVVCG 296
           V + +AG  HS  +   G V     R  D  L       R  P+++S    P    V+CG
Sbjct: 15  VVLVSAGASHSVAL-LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICG 73

Query: 297 GYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
             HT   +    ++Y+WG  + G LG G+   + +P+ V+       + Q++CG  H  A
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKA-LQGLKIKQIACGDSHCLA 132

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++  G++ +WG             +  GQLG G   D + P  +   E+V    ++ G  
Sbjct: 133 VTMAGEVQSWG------------RNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 415 HTGALLE 421
           HT A+ E
Sbjct: 181 HTAAVTE 187


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4338 G-LQGKNVRQISAGRCHSAA 4356



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTGL 4339



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4284

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4285 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4331

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4332 EPTLVTGLQGKNVR--QISAGRCHSAA 4356



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4196 HTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4245

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4246 GTQFSVAL 4253



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 176/386 (45%), Gaps = 36/386 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV        ++ ALA GG+H+L LT+TG V A G N  GQ
Sbjct: 62  WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121

Query: 103 LGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+ + GL     +  ++ G  HS A+T  G +  WG NSNGQLG G  
Sbjct: 122 LGDGTTTDRS-TPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A+  P+   +   + I    A+     S+A+T  G  L+WG+   G+LG G        
Sbjct: 180 TARSTPVTVGLPAGTTITALAAS---TYSLALTDTGAALAWGSNSRGQLGDGT------- 229

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T   TP  +    G  +   AA + HS  + + G V  +G  +  ++   +G    R
Sbjct: 230 --TTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQL--GDGTTTNR 285

Query: 281 PSLISK-LPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + ++  LP    +     G  HT VLTS G +  WGSN NG LG G+     +P  V  
Sbjct: 286 STPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGL 345

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P   + +  ++ G+ H+ A+++ G +L WG G S+           GQLG G   D   P
Sbjct: 346 PAGTT-ITALAAGYYHSLALTDTGAVLAWG-GNSY-----------GQLGDGTTTDRSTP 392

Query: 396 TIVNFGENVKALQVSCGFNHTGALLE 421
             V          +    NH  AL+ 
Sbjct: 393 VTVGLPAGTTITVLVSMDNHGMALVA 418



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 144/338 (42%), Gaps = 36/338 (10%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
            V A G N  GQLG       S  P+ + GL     +  ++ G  HS A+T  G +  WG
Sbjct: 58  TVLAWGDNFSGQLGDGTTTARS-TPVTV-GLPAGTTITALAAGGSHSLALTDTGVVLAWG 115

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            NS GQLG G    +  P+   V   +G      A G   S+A+T  G VL+WG+  +G+
Sbjct: 116 SNSRGQLGDGTTTDRSTPV--TVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQ 173

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G          +T+  TP  +    G  +  A A   +S  + + G    +G  +  
Sbjct: 174 LGDGT---------TTARSTPVTVGLPAGTTIT-ALAASTYSLALTDTGAALAWGSNSRG 223

Query: 269 KMLFQEGNHARRPSLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +G    R + ++  LP    +  +   Y H+  LT  G +  WGSN NG LG G+
Sbjct: 224 QL--GDGTTTDRSTPVTVSLPAGTTITALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT 281

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                +P  V  P   + +  ++ G  HT  + S G +L WG             +S GQ
Sbjct: 282 TTNRSTPVTVGLPAGTT-ITALAAGRSHTLVLTSAGAVLAWG------------SNSNGQ 328

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           LG G   D   P  V          ++ G+ H+ AL +
Sbjct: 329 LGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4265 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4324 G-LQGKNVRQISAGRCHSAA 4342



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4319 PTLVTGL 4325



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4159 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4211 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4270

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4271 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4317

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4318 EPTLVTGLQGKNVR--QISAGRCHSAA 4342



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4181

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4182 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4231

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4232 GTQFSVAL 4239



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4115 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4173

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4226

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4227 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4283 -NRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4342 G-LQGKNVRQISAGRCHSAA 4360



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4168

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4227

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4228 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4278 -RARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4336

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4337 PTLVTGL 4343



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4004 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4061 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4119

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4120 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4176

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4177 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4228

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4229 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4288

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4289 PL-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4335

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4336 EPTLVTGLQGKNVR--QISAGRCHSAA 4360



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4031

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4032 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4141 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4199

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4200 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4249

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4250 GTQFSVAL 4257



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3752

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3753 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3811

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 3812 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3864

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3865 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3920

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 3921 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVT 3979

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 3980 G-LQGKNVRQISAGRCHSAA 3998



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 162/321 (50%), Gaps = 25/321 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKHTAA 355
            G      + Q+S G  H+ A
Sbjct: 713 SG-LDGIAIQQISAGTSHSLA 732



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3747 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3806

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 3807 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 3865

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 3866 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3915

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 3916 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 3974

Query: 281  PSLISKL 287
            P++++ L
Sbjct: 3975 PTVVTGL 3981



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 176/393 (44%), Gaps = 52/393 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  G+ E   +P +  +F     + +  G   T  ++  G V A G   +G
Sbjct: 376 VWGSNSSHQLVEGTQEKILQPKLAPSFS--DAQTIEAGQYCTFVISTDGSVRACGKGSYG 433

Query: 102 QLGISENIGYS------LEPLRISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQ 154
           +LG+ ++   S       EP R   +KK  V  S G   H+ A T +GE++ WG    G+
Sbjct: 434 RLGLGDSNNQSTLKKLTFEPHR--SIKK--VSSSKGSDGHTLAFTTEGEVFSWGDGDYGK 489

Query: 155 LGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           LG G    +K  K+I  P     L G      + G+  S AVT  G++ +WG G  GRLG
Sbjct: 490 LGHGNSSTQKYPKLIQGP-----LQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLG 544

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDK 269
           HG          S S   P L+K++  V     + G  H+  + ++GR V+ FG     K
Sbjct: 545 HGD---------SNSRNIPTLVKDISNVGE--VSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 270 MLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   + N   +P +I  L   +  +V  G   +  LTS G++Y WG     CLG GS + 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEA 651

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
                ++    + + +  VS G  H  A+S + ++  W            G++S GQ G 
Sbjct: 652 TALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAW------------GNNSMGQCGQ 699

Query: 387 GNDVDYI-HPTIVNFGENVKALQVSCGFNHTGA 418
           GN    I  P  V+  + +   Q+S G +H+ A
Sbjct: 700 GNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3642 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 3698

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3699 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3757

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 3758 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 3814

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 3815 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3866

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 3867 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 3926

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 3927 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 3973

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 3974 EPTVVTGLQGKNVR--QISAGRCHSAA 3998



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3614 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3669

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3670 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3719

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3720 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3778

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 3779 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 3837

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 3838 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 3887

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 3888 GTQFSVAL 3895



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
             +   P KV  L GI  +Q + G   S+A T 
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4215

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4216 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4272 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4331 G-LQGKNVRQISAGRCHSAA 4349



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4216

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4217 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4267 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4325

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4326 PTLVTGL 4332



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3993 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4050 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4108

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4109 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4165

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4166 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4217

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4218 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4277

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4278 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4324

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4325 EPTLVTGLQGKNVR--QISAGRCHSAA 4349



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4188

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4189 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4238

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4239 GTQFSVAL 4246



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2564

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2565 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2623

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 2624 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2676

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 2677 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2732

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 2733 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2791

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 2792 G-LQGKNVRQISAGRCHSAA 2810



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2559 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2618

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 2619 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2677

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 2678 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2727

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 2728 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 2786

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 2787 PTLVTGL 2793



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2454 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2510

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2511 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2569

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2570 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2626

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 2627 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 2678

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 2679 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 2738

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 2739 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 2785

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 2786 EPTLVTGLQGKNVR--QISAGRCHSAA 2810



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 2426 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2481

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2482 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2531

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2532 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2590

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 2591 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 2649

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 2650 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 2699

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 2700 GTQFSVAL 2707


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4216

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4273 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4332 G-LQGKNVRQISAGRCHSAA 4350



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4217

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4268 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4327 PTLVTGL 4333



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3994 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4051 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4109

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4110 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4166

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4167 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4218

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4219 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4278

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4279 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4325

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4326 EPTLVTGLQGKNVR--QISAGRCHSAA 4350



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4189

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4190 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4239

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4240 GTQFSVAL 4247



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1691

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1692 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1750

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 1751 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1803

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 1804 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1859

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 1860 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1918

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 1919 G-LQGKNVRQISAGRCHSAA 1937



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 1686 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1745

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 1746 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1804

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 1805 TAKS--SPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1854

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 1855 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 1913

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 1914 PTLVTGL 1920



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 1581 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 1637

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 1638 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 1696

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 1697 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 1753

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 1754 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 1805

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 1806 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 1865

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 1866 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 1912

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 1913 EPTLVTGLQGKNVR--QISAGRCHSAA 1937



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 1553 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1608

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 1609 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1658

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 1659 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1717

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 1718 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 1776

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 1777 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 1826

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 1827 GTQFSVAL 1834


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4074

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4075 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4133

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4134 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4186

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4187 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4242

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4243 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4301

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4302 G-LQGKNVRQISAGRCHSAA 4320



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4069 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4128

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4129 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4187

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4188 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4237

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4238 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4296

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4297 PTLVTGL 4303



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3964 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4020

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4021 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4079

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4080 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4136

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4137 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4188

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4189 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4248

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4249 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4295

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4296 EPTLVTGLQGKNVR--QISAGRCHSAA 4320



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3936 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3991

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3992 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4041

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4042 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4100

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4101 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4159

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4160 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4209

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4210 GTQFSVAL 4217



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 182/364 (50%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-V 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G +     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 + +P+L+K L G+     AAG  HS  +  +G ++ +G     ++   + N   
Sbjct: 177 -----KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRY 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+++V   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 VPNLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V +++CG +HT+    S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKS 337

Query: 395 PTIV 398
           P  V
Sbjct: 338 PFTV 341



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  +      P  I  L   ++VQ++ GY+HS A++   E++ WG+N  GQLGLG    
Sbjct: 117 GLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCK 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L GI   Q A G   S  +T  G +  WG    G+LG   E+       
Sbjct: 177 KQTS-PQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 229 --DRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   E+ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P  I  L   +  +V CG YH+  L+   E++ WG N+ G LG+G
Sbjct: 113 DGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +     +  ++       P  QV+ G  H+  ++  G I  W            G +  G
Sbjct: 173 TDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 257


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4048

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4049 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4107

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4108 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4160

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4161 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4216

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4217 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4275

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4276 G-LQGKNVRQISAGRCHSAA 4294



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4043 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4102

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4103 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4161

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4162 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4211

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4212 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4270

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4271 PTLVTGL 4277



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3938 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 3994

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3995 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4053

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4054 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4110

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4111 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4162

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4163 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4222

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4223 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4269

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4270 EPTLVTGLQGKNVR--QISAGRCHSAA 4294



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3910 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3965

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3966 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4015

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4016 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4074

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4075 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4133

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4134 HTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4183

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4184 GTQFSVAL 4191



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4104

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4105 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4163

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4164 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4216

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4217 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4272

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4273 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4331

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4332 G-LQGKNVRQISAGRCHSAA 4350



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4099 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4158

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4159 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4217

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4218 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4267

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4268 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4326

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4327 PTLVTGL 4333



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3994 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4050

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4051 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4109

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4110 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4166

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4167 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4218

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4219 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4278

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4279 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4325

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4326 EPTLVTGLQGKNVR--QISAGRCHSAA 4350



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3966 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4021

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4022 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4071

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4072 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4130

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4131 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4189

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4190 HTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4239

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4240 GTQFSVAL 4247



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + Q+S G  H+AA
Sbjct: 4339 G-LQGKNIRQISAGRCHSAA 4357



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4339 G-LQGKNVRQISAGRCHSAA 4357



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 130/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++VDG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNVR--QISAGRCHSAA 4357



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSVDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + Q+S G  H+AA
Sbjct: 4339 G-LQGKNIRQISAGRCHSAA 4357



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L G+ ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTGL 4340



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGMIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4333 EPTLVTGLQGKNIR--QISAGRCHSAA 4357



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      V Q+S G  H+AA
Sbjct: 4338 G-LQGKNVRQISAGRCHSAA 4356



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTGL 4339



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4285 PV-LAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4331

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4332 EPTLVTGLQGKNVR--QISAGRCHSAA 4356



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4196 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4245

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4246 GTQFSVAL 4253



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 169/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4114

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4115 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4173

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV T G  V ++G G  G+LG G      
Sbjct: 4174 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4226

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4227 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4282

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4283 -NRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4341

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4342 VLQG----KNVRQISAGRCHSAA 4360



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 163/334 (48%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP   K      I   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRNIPTLVK----DIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 GG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4109 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4168

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4169 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4227

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4228 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4277

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4278 -RARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4336

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4337 PTLVTVL 4343



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 172/390 (44%), Gaps = 46/390 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F     + + CG   T  +   G V A G   +G
Sbjct: 4004 LWGAGRHGQLAEAG-RNVMIPAAAPSFSPA--QQVVCGQNCTFVIQANGTVLACGEGSYG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4061 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4119

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4120 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4176

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4177 --------KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNST 4228

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4229 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4288

Query: 335  Q---GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
                G F    ++ ++ G +HT A+S  G +  WG             +S GQLG G+  
Sbjct: 4289 PLLAGVF----IEDIAVGAEHTLALSSTGDVYAWG------------SNSEGQLGLGHTN 4332

Query: 391  DYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 HVREPTLVTVLQGKNVR--QISAGRCHSAA 4360



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3976 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSP- 4031

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4032 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4081

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4082 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4140

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4141 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4199

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4200 HTVAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVAC 4249

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4250 GTQFSVAL 4257



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 119/230 (51%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           +LG  ++   +     I  L K+++   ++S G  H+ A++ DG  ++ +G   NG+LG 
Sbjct: 542 RLGHGDSNSRN-----IPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGH 596

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS 
Sbjct: 597 GD--TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSE 650

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
              LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 651 ATALR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVGGLDGIAIQQISAGTSHS 730



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L S    ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+G+  
Sbjct: 64  GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A   I +P  ++ LS I   Q A G   S+A++    + SWG    G+LG G E     
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               + V Q++CG +HT A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGIGSTSNKKS 337

Query: 395 PTIV 398
           P++V
Sbjct: 338 PSMV 341



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 144/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G    GQ+
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ +  +Y WG+N  GQLGLG +  
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286

Query: 283 LISKL--PYSEEVVCGGYHT-CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT   + S G +Y++G   NG LGIGS     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 120/280 (42%), Gaps = 27/280 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +V+  P + +       +    G   +  V   G V + G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G
Sbjct: 61  NDLGQLGHDK-----------SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++ +    ++ R P  I  L   +  +V CG +H+  L+    +Y+WG N+ G L
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 379
           G+GS     S  R     S  P   ++ G  H+ A++  G I  W            G +
Sbjct: 170 GLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW------------GRN 217

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 218 KFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 170/320 (53%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4127 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4186

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4187 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4245

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P KV  L G    Q A G   ++ V+  G ++ ++G G  G+LG G      
Sbjct: 4246 TSNK--KLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGN----- 4298

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G+V+ FG DR +     +  NH
Sbjct: 4299 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNH 4354

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L   + ++V  G  HT VL+S G++YTWGSN  G LG+G  + +  P  V 
Sbjct: 4355 -NRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVREPTLVT 4413

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   + Q+S G  H+AA
Sbjct: 4414 T-LQGKNIHQISAGRCHSAA 4432



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 435 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 493

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 494 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 553

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 554 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 609

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 610 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 659

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 660 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 719

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 720 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 127/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4181 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4240

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P +++ L+   V Q++ G +H+  ++ DG + + +G    G+LGLG  
Sbjct: 4241 LGLGNTSNKKL-PEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNS 4299

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  GKV ++G      L  G        
Sbjct: 4300 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEG-------- 4349

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L G+ ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4350 -RARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGLGHTNHVRE 4408

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4409 PTLVTTL 4415



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 169/385 (43%), Gaps = 36/385 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P +  +F +   + + CG   T  +   G V A G   +G
Sbjct: 4076 LWGAGRHGQLAEAG-RNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACGEGSYG 4132

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4133 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4191

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4192 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4248

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG  V   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4249 --------KKLPEKVTALEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNST 4300

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G+++T+G +    L  G     + P++V
Sbjct: 4301 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQV 4360

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             G  S   +  V+ G +HT  +S  G + TWG             +S GQLG G+     
Sbjct: 4361 PG-LSGIHIQDVAVGAEHTLVLSSTGDVYTWG------------SNSEGQLGLGHTNHVR 4407

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             PT+V   +     Q+S G  H+ A
Sbjct: 4408 EPTLVTTLQGKNIHQISAGRCHSAA 4432



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 162/347 (46%), Gaps = 39/347 (11%)

Query: 82  HTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
            T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+
Sbjct: 371 ETPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLASSFADAQTIEAGQYCTFVIS 426

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKV 198
            DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEV 486

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
            SWG G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G
Sbjct: 487 FSWGDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDG 537

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNE 316
            +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +
Sbjct: 538 ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGD 597

Query: 317 NGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 372
           NG LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G 
Sbjct: 598 NGKLGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGC 653

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            S +  +             + P ++      + + +S G +H  AL
Sbjct: 654 GSSEATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 687



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 130/283 (45%), Gaps = 32/283 (11%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    +A + I +PT     S    +Q   G   +  +   G VL+ G
Sbjct: 4073 DVFLWGAGRHGQLA---EAGRNILVPTIAPSFSQ--AQQVVCGQNCTFVIQPNGTVLACG 4127

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4128 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4178

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4179 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4237

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
             G LG+G+      PE+V        V QV+CG  HT  +S   ++ W +G        D
Sbjct: 4238 YGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSADGMMVWAFG--------D 4288

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4289 GDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 489 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 548

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 549 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 605

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 606 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 660

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 661 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 701



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 650

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 651 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 710

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 711 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 752



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 542 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 599

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 600 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 656

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 657 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 708

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 709 --STGPITKPKKVIGLDGVAIQQISAGTSHS 737


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 183/388 (47%), Gaps = 41/388 (10%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G Y +LG  S+E  S+  P     F    + +++CG  ++  LTE G VY  G    
Sbjct: 547 WGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSV 606

Query: 101 GQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
               I+          L P ++  L+ E+V IS G++HS+A+  +GEL  WG   +GQLG
Sbjct: 607 KNPPIATLGNGTFDDQLLPQKVESLQ-EIVVISIGFYHSAAVKSNGELLTWGCGEDGQLG 665

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G    +  PIP  V+ ++  +  Q   G + ++ +T  GKV +WG    G+LG G    
Sbjct: 666 HGDVFNQ--PIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGD--- 720

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +    TP L+  L+   +   A G  H+A +  N  V +FG+ A         N
Sbjct: 721 ------TQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAA----MGSAN 770

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P ++  L     E + CG Y T  LT  G++YTWGS +    G G+ +    P+ V
Sbjct: 771 IISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTSEA--HPKLV 828

Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +   ++S + Q+SCG +H A +++ GKI T G       F + GH++G Q      +D +
Sbjct: 829 ETLRNQS-IRQISCGGRHMAFLTDSGKIYTSG----KDPFGQLGHAAGDQ-NRPKKIDSL 882

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLE 421
             T          + +SCG NH  AL +
Sbjct: 883 LKTTF--------MSISCGENHNAALFD 902



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 141/294 (47%), Gaps = 24/294 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG G + ++  P V  +   H +  + CG  HT+ LT+ G V+  G +++GQ
Sbjct: 656 WGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQ 715

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    +  P+ ++ L K  ++QI+ G  H++ +T + E+ ++G       G    +
Sbjct: 716 LGLGDT-QKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGN------GAAMGS 768

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A +I IP  V  L  +  ++ + G   + A+T  G V +WG+G    LGHG         
Sbjct: 769 ANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSG--QELGHGH-------- 818

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             TSE  P+L++ L    ++  + G  H A + ++G++Y  G     ++    G+  R  
Sbjct: 819 -GTSEAHPKLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNRPK 877

Query: 282 SLISKLPYS-EEVVCGGYHTCVL----TSGGELYTWGSNENGCLGIGSIDVLHS 330
            + S L  +   + CG  H   L     S  + + W   E     + S++++ S
Sbjct: 878 KIDSLLKTTFMSISCGENHNAALFDTTRSFRDKFCWKLLETQRTLVRSLNIIRS 931



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 28/259 (10%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P     L+ + + +++L    +  +     +++WG+G   +LG          +   S+ 
Sbjct: 514 PGSSPPLNAVNSAESSLSMRSATQLDTSRGLMTWGSGSYCKLGFKS-------VEKDSQP 566

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV-DKMLFQEGNHARRPSLIS- 285
           TP  +       +   + G  +SA + ENG VY++G  +V +  +   GN      L+  
Sbjct: 567 TPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGTFDDQLLPQ 626

Query: 286 KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP-ERVQGPFSES 341
           K+   +E+V    G YH+  + S GEL TWG  E+G LG G  DV + P  +V    +  
Sbjct: 627 KVESLQEIVVISIGFYHSAAVKSNGELLTWGCGEDGQLGHG--DVFNQPIPKVVQSITSH 684

Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V QV CG KHT  +++ GK+ TW            G S  GQLG G+      P +V  
Sbjct: 685 WVTQVQCGEKHTICLTKNGKVFTW------------GTSEYGQLGLGDTQKNCTPMLVTS 732

Query: 401 GENVKALQVSCGFNHTGAL 419
            +    +Q++CG  H   L
Sbjct: 733 LDKYHIIQIACGATHNAVL 751


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 184/390 (47%), Gaps = 41/390 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+ +YG+LG    ES   P ++ S +  + +K + CGG H+  +T +G +   G    G
Sbjct: 13  WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ + +   + P R+    K V+ +S    HS+AI  DG LY WG N +G+LG+G   
Sbjct: 73  QLGLGD-LKDIVIP-RVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLN 130

Query: 162 AKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             +       P  VE L      + + G   +  +T   K  +WG G  GRLGHG  + +
Sbjct: 131 VNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDV 190

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    YTP+LI+ L G+ VK    G  H+A +  NG+VY  G  A  K+ F     
Sbjct: 191 ---------YTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKED 241

Query: 278 ARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG---IGSIDVLHSP 331
              P L+         +EV  G  H+ V+T+ G++YTWG  + G LG    G    + SP
Sbjct: 242 IYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--QGGRLGHIYNGPEPDILSP 299

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-D 389
           + V+   S   V+ +SCG  HT  IS  G +  WG   +              LGHG  D
Sbjct: 300 KLVEKLNSIIAVN-ISCGHSHTVVISNIGDVYAWGVTRN--------------LGHGVID 344

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                PT+    +N   +QVSCG  HT AL
Sbjct: 345 SKPNDPTLHPILQNKNIVQVSCGKTHTIAL 374



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 171/334 (51%), Gaps = 32/334 (9%)

Query: 92  VYATGLNDFGQLG-ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWG 148
           V A G +++GQLG I E    ++EP  I  L     + ++  G HHS+ IT  GEL +WG
Sbjct: 10  VVAWGSSEYGQLGAIYEE--SNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWG 67

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
               GQLGLG    K I IP  +  +  +     +     S A+   G++ +WG   SG+
Sbjct: 68  YGGCGQLGLGD--LKDIVIPRVMTSIKNVI--NVSCSDRHSAAILEDGRLYTWGCNKSGK 123

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G   S+   L +    TP+L+++L   KV   + G  H+AC+ +  + Y +G     
Sbjct: 124 LGIG---SLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQG 180

Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   + N    P LI  L     + +VCGG+HT +L + G++Y  G    G LG GS +
Sbjct: 181 RLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKE 240

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            ++ P+ +QG  +   + +VS G++H+A I ++GK+ TWG               GG+LG
Sbjct: 241 DIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--------------QGGRLG 286

Query: 386 H---GNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           H   G + D + P +V    ++ A+ +SCG +HT
Sbjct: 287 HIYNGPEPDILSPKLVEKLNSIIAVNISCGHSHT 320



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 87/176 (49%), Gaps = 8/176 (4%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG G  GRLG G     + P +  +    S+K + CGG HT  L   G VY  G   
Sbjct: 171 AYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGA 230

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG- 156
           FG+LG    E+I Y  + L+ S   K + ++S GY HS+ IT  G++Y WG+   G+LG 
Sbjct: 231 FGKLGFGSKEDI-YIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQ--GGRLGH 287

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           +       I  P  VE L+ I     + G   +V ++  G V +WG   +  LGHG
Sbjct: 288 IYNGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVISNIGDVYAWGV--TRNLGHG 341



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 30/231 (12%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDEN 256
           V++WG+   G+LG   E S            P+LI+ L    ++K    G  HSA I  +
Sbjct: 10  VVAWGSSEYGQLGAIYEES---------NIEPKLIESLYSFNRIKEVCCGGHHSAVITHS 60

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G + ++G     ++   +      P +++ +     V C   H+  +   G LYTWG N+
Sbjct: 61  GELIVWGYGGCGQLGLGDLKDIVIPRVMTSIKNVINVSCSDRHSAAILEDGRLYTWGCNK 120

Query: 317 NGCLGIGSIDVLH------SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
           +G LGIGS++V        +P+ V+   +E  V +VSCG  HTA +++  K  TWG G  
Sbjct: 121 SGKLGIGSLNVNLNNNIICTPQLVEKLLNEK-VIKVSCGSFHTACLTDLNKAYTWGLGMQ 179

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                       G+LGHG+  D   P ++     +    + CG +HT  LL
Sbjct: 180 ------------GRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILL 218



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 79/162 (48%), Gaps = 29/162 (17%)

Query: 271 LFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +++E N    P LI  L YS    +EV CGG+H+ V+T  GEL  WG    G LG+G + 
Sbjct: 24  IYEESN--IEPKLIESL-YSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLK 80

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +  P RV        V  VSC  +H+AAI E G++ TWG   S            G+LG
Sbjct: 81  DIVIP-RVMTSIKN--VINVSCSDRHSAAILEDGRLYTWGCNKS------------GKLG 125

Query: 386 HGNDVDYIH------PTIVNFGENVKALQVSCGFNHTGALLE 421
            G+    ++      P +V    N K ++VSCG  HT  L +
Sbjct: 126 IGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTD 167


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 169/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV T G  V ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 4279 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4337

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4333 PTLITVL 4339



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 174/390 (44%), Gaps = 46/390 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   PV   +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPVAAPSFSQ--AQQVVCGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  ---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
                G F    ++ ++ G +HT A+S  G +  WG             +S GQLG G+  
Sbjct: 4285 PVLSGVF----IEDIAVGAEHTLALSSTGDVYAWG------------SNSEGQLGLGHTN 4328

Query: 391  DYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                PT++    G+N++  Q+S G  H+ A
Sbjct: 4329 HVREPTLITVLQGKNIR--QISAGRCHSAA 4356



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4137 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4196 HTVAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVAC 4245

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4246 GTQFSVAL 4253



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 11/189 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSIL 218
             +   P KV  L G+  +Q + G   S+A T      +V++W       L    E S  
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDL----EESTF 758

Query: 219 GFLRSTSEY 227
             LRS  E+
Sbjct: 759 SHLRSFLEH 767



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 164/336 (48%), Gaps = 31/336 (9%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWG 148
           VYA G  D GQLGI +   YS  P   S    + K++V I+   +H++ +T +GE+Y  G
Sbjct: 4   VYALGRGDLGQLGIGD---YSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  GQLG+     +V+PI  +V  L        A GF+ +VAVT  G + SWG    G+
Sbjct: 61  SNDAGQLGVRGMEEQVVPI--RVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQ 118

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG    + + G         PR++K    +     AAG  H+  +  +G VY FGD +  
Sbjct: 119 LGFDSGNIVDGV-------QPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSG 171

Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            +     +    PSL+  L      ++ CG  H+  LT  G+++TWG  + G LG GS  
Sbjct: 172 ALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQ 231

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +  P  V+    +  V Q++CG  HT AI S+G++ +WG    HG +        GQ G
Sbjct: 232 NIKLPVAVK-ALVDHDVIQIACGGDHTLAITSDGRLFSWG----HGLW--------GQTG 278

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           HG   D + P  V+  E    +QVS G  HT  LL+
Sbjct: 279 HGTKEDVLSPKQVHQLEGRVLVQVSAGARHTVVLLD 314



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 158/326 (48%), Gaps = 15/326 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G GD G+LG+G       P   S      +  +A    HT FLT+ G VY TG ND GQL
Sbjct: 8   GRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDAGQL 67

Query: 104 GISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+   +   + P+R++ L   +V  I+ G+ H+ A+T  G L  WG +  GQLG      
Sbjct: 68  GV-RGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNI 126

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V+    +   + A G   ++A+TG G V S+G G SG LGHG        L 
Sbjct: 127 VDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGN-------LD 179

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             S  TP L+K L G+ V   A G  HSA +  +G+V+ +G     ++      + + P 
Sbjct: 180 GCS--TPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPV 237

Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            +  L   +  ++ CGG HT  +TS G L++WG    G  G G+ + + SP++V      
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH-QLEG 296

Query: 341 SPVDQVSCGWKHTAA-ISEGKILTWG 365
             + QVS G +HT   +  G++  WG
Sbjct: 297 RVLVQVSAGARHTVVLLDRGEVYGWG 322



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 142/287 (49%), Gaps = 25/287 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D G+LG+  +E +  P+  +A + H +  +ACG  HT+ +TETG + + G +++GQL
Sbjct: 60  GSNDAGQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119

Query: 104 GI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G  S NI   ++P  + G +     +++ G +H+ A+T  G++Y +G  S+G LG G   
Sbjct: 120 GFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLD 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P+ V+ L G+   Q A G   S A+T  GKV +WG G  G+LGHG   +I    
Sbjct: 180 G--CSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNI---- 233

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +K L    V   A G  H+  I  +GR++ +G       L+ +  H  + 
Sbjct: 234 -----KLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWG-----HGLWGQTGHGTKE 283

Query: 282 SLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
            ++S     +       +V  G  HT VL   GE+Y WG  E   LG
Sbjct: 284 DVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/226 (34%), Positives = 117/226 (51%), Gaps = 13/226 (5%)

Query: 41  ALWGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A WG  +YG+LG   G++    +P +           +A GG HTL LT +G VY+ G  
Sbjct: 109 ASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDG 168

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G LG     G S   L  S     V QI+ G +HS+A+TVDG+++ WG+   GQLG G
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHG 228

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             + + I +P  V+ L      Q A G + ++A+T  G++ SWG G  G+ GHG +  +L
Sbjct: 229 --STQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                    +P+ + +LEG  +   +AG  H+  + + G VY +GD
Sbjct: 287 ---------SPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGD 323



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 6/117 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG GS ++   PV   A   H +  +ACGG HTL +T  G +++ G   +GQ
Sbjct: 217 WGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQ 276

Query: 103 LG--ISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G    E++   L P ++  L+  V VQ+S G  H+  +   GE+Y WG     QLG
Sbjct: 277 TGHGTKEDV---LSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P  C  F   +++ + CG  HT F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+G+  
Sbjct: 64  GQLGHDKS---RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVS- 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A   I +P  ++ LS I   Q A G   S+A++    + SWG    G+LG G E     
Sbjct: 120 IAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  PR IK L G+     AAG  HS  +  +G ++ +G     ++   +     
Sbjct: 177 -----KESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRS 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S++++   CG  HT  LT  G ++T+G+   G LG  S     +P +V  
Sbjct: 232 DPALLKSL-RSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKV-F 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               + V Q++CG +HT A   S G+I ++G GG+            GQLG G+  +   
Sbjct: 290 ELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGN------------GQLGIGSTSNKKS 337

Query: 395 PTIV 398
           P++V
Sbjct: 338 PSMV 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 143/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +   + A++CG AHTL L + G V++ G    GQ+
Sbjct: 59  GCNDLGQLGHD--KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 116

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ +  +Y WG+N  GQLGLG +  
Sbjct: 117 GVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKR 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ LSGI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 177 KE-SAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDE-------- 227

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     +H   P 
Sbjct: 228 -TDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPR 286

Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT     S G +Y++G   NG LGIGS     SP  V+G
Sbjct: 287 KVFELMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKG 343



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 27/277 (9%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +V+  P + +       +    G   +  V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G  A
Sbjct: 64  GQLGHDK-----------SRKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAA 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ +    ++ R P  I  L   +  +V CG +H+  L+    +Y+WG N+ G LG+G
Sbjct: 113 HGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           S     S  R     S  P   ++ G  H+ A++  G I  W            G +  G
Sbjct: 173 SEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGW------------GRNKFG 220

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 221 QLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTAAL 257


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  145 bits (365), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 163/321 (50%), Gaps = 43/321 (13%)

Query: 111  YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            + + PL+    +K+ +++S G+ H + IT DGELY WG N +GQLG G +  K + +P +
Sbjct: 1113 FPMAPLKN---EKKAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKR 1169

Query: 171  VECLSG---IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            V+   G   IF  +   G E ++AV     V SWG+   G+LGHG         ++ ++ 
Sbjct: 1170 VDFFRGKSPIFMVEC--GGEHTIAVDSNYFVYSWGSDKFGQLGHGT--------KAVNQS 1219

Query: 228  TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR---P 281
             P++I+EL G K++  AAGF H+  + ++G ++ FG     ++    F   N   R    
Sbjct: 1220 RPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEIN 1279

Query: 282  SLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +++  L + +     ++ CG  H+ + +  GE+Y+WG  + G LG    + +  P  ++ 
Sbjct: 1280 AIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIE- 1338

Query: 337  PFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              +   V ++SCG  HT A ++ K + +WG  G H            +LGH +D D   P
Sbjct: 1339 --TLRGVTKISCGHFHTVATTDLKNVYSWG-SGEH-----------MKLGHSSDKDESVP 1384

Query: 396  TIVNFGENVKALQVSCGFNHT 416
             +V+F       +V CG NHT
Sbjct: 1385 KVVDFFIQKNVSKVVCGQNHT 1405



 Score =  122 bits (306), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 105/362 (29%), Positives = 161/362 (44%), Gaps = 21/362 (5%)

Query: 69   EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGL--KKEV 125
            EK ++K ++CG  H   +T+ G +Y  G N  GQLG    +  +L  P R+     K  +
Sbjct: 1121 EKKAIK-VSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPI 1179

Query: 126  VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              +  G  H+ A+  +  +Y WG +  GQLG G KA      P  +E L+G   +  A G
Sbjct: 1180 FMVECGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQ-SRPKVIEELTGQKIQAIAAG 1238

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
            F  ++ +   G++ S+G G  G+LG G   S     R         ++  +G K+   A 
Sbjct: 1239 FAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIAC 1298

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            GF HS    ENG VY +G     ++  +   +  +P LI  L    ++ CG +HT   T 
Sbjct: 1299 GFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKISCGHFHTVATTD 1358

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
               +Y+WGS E+  LG  S D   S  +V   F +  V +V CG  HT  I+    L   
Sbjct: 1359 LKNVYSWGSGEHMKLGHSS-DKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNS 1417

Query: 366  WGGSHGTFSEDGHSSG----------GQLGHGNDV-----DYIHPTIVNFGENVKALQVS 410
                    + +G SS           G+LG G D+     D   PT +    ++  + +S
Sbjct: 1418 NQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDIS 1477

Query: 411  CG 412
            CG
Sbjct: 1478 CG 1479



 Score =  119 bits (298), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 115/411 (27%), Positives = 166/411 (40%), Gaps = 80/411 (19%)

Query: 43   WGNGDYGRLGLGSLE---SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLN 98
            WG+   G+LG G LE   +   P     F  K  +  + CGG HT+ +     VY+ G +
Sbjct: 1146 WGSNQSGQLGHG-LEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSD 1204

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             FGQLG          P  I  L  + +Q I+ G+ H+  +   GEL+ +G    GQLG 
Sbjct: 1205 KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGT 1264

Query: 158  GKKAAKVIPIPTKVECLSGIFT-------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G   +K IP   ++  + G           Q A GF  SV  +  G+V SWG G  G+LG
Sbjct: 1265 GSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLG 1324

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            H    +I           PRLI+ L GV  KI + G  H+    +   VY +G     K+
Sbjct: 1325 HKVFENI---------SKPRLIETLRGV-TKI-SCGHFHTVATTDLKNVYSWGSGEHMKL 1373

Query: 271  LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLT---------------------SGG 307
                      P ++         +VVCG  HT  +T                     S  
Sbjct: 1374 GHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDEDEENMNGKSSS 1433

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD------------QVSCGWKHTAA 355
             +Y WGS E+G LG+G          ++ PF + P+              +SCG   +A 
Sbjct: 1434 PIYAWGSAEHGKLGLGG--------DLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAM 1485

Query: 356  I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
            I S   I  WG G              GQ+G+G + D   PT ++  ++ K
Sbjct: 1486 ITSNNAIYVWGCG------------RFGQIGNGKNDDVWVPTRISLNDSTK 1524



 Score =  106 bits (264), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 94/344 (27%), Positives = 148/344 (43%), Gaps = 55/344 (15%)

Query: 39   FAALWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
            F   WG+  +G+LG G+   ++ RP V        ++A+A G AH + L ++G +++ G 
Sbjct: 1197 FVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGY 1256

Query: 98   NDFGQLGI----SENIGYSLEPLRI-SGLKK----EVVQISTGYHHSSAITVDGELYMWG 148
             DFGQLG     S+NI   +E   I  GL+     ++ QI+ G+ HS   + +GE+Y WG
Sbjct: 1257 GDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVICSENGEVYSWG 1316

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                GQLG   K  + I  P  +E L G+   + + G   +VA T    V SWG+G   +
Sbjct: 1317 LGKQGQLG--HKVFENISKPRLIETLRGV--TKISCGHFHTVATTDLKNVYSWGSGEHMK 1372

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--------------D 254
            LGH  +           E  P+++       V     G  H+  I              D
Sbjct: 1373 LGHSSDKD---------ESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDLNNSNQDDED 1423

Query: 255  E---NGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---------EVVCGGY 298
            E   NG+    +Y +G     K+    G   + P     +P +          ++ CG  
Sbjct: 1424 EENMNGKSSSPIYAWGSAEHGKLGL--GGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSD 1481

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             + ++TS   +Y WG    G +G G  D +  P R+    S  P
Sbjct: 1482 FSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISLNDSTKP 1525



 Score = 42.7 bits (99), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 16/85 (18%)

Query: 339  SESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI--HP 395
            +E    +VSCGW H A I+ +G++ TW            G +  GQLGHG +V+     P
Sbjct: 1120 NEKKAIKVSCGWDHIAVITDDGELYTW------------GSNQSGQLGHGLEVNKTLSLP 1167

Query: 396  TIVNFGENVKAL-QVSCGFNHTGAL 419
              V+F      +  V CG  HT A+
Sbjct: 1168 KRVDFFRGKSPIFMVECGGEHTIAV 1192


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 170/326 (52%), Gaps = 22/326 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4202

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4203 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 4261

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    + A G   ++ V T G  V ++G G  G+LG G      
Sbjct: 4262 TSNK--KLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGN----- 4314

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4315 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4370

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L   + E++  G  HT  L++ G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4371 -NRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4429

Query: 336  GPFSESPVDQVSCGWKHTAAISEGKI 361
                +S V Q+S G  H+AA S   +
Sbjct: 4430 SLQGKS-VRQISAGRCHSAAWSSPPV 4454



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 430 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 488

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 489 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 548

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 549 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 604

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 605 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 654

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 655 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 714

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 715 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4197 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 4256

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ +++ G +H+  ++ DG + + +G    G+LGLG  
Sbjct: 4257 LGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLGNS 4315

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4316 TAKS--SPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4365

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV V+  A G  H+  +  +G VY +G  +  ++     NH R 
Sbjct: 4366 -RARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVRE 4424

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4425 PTLVTSL 4431



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 169/388 (43%), Gaps = 42/388 (10%)

Query: 42   LWGNGDYGRL---GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            LWG G +G+L   G  ++     P  C A      + + CG   T  +   G V A G  
Sbjct: 4092 LWGAGRHGQLAEAGRNAVSPPPSPSFCQA------QQVICGQNCTFVIQANGTVLACGEG 4145

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQ 154
             +G+LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+
Sbjct: 4146 SYGRLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGK 4204

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  
Sbjct: 4205 LGHGNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNT 4262

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
            S+         +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+   
Sbjct: 4263 SN---------KKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLGLG 4313

Query: 274  EGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P
Sbjct: 4314 NSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRP 4373

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            ++V    S   V+ ++ G +HT A+S  G +  WG             +S GQLG G+  
Sbjct: 4374 QQVPA-LSGVFVEDIAVGAEHTLALSASGDVYAWG------------SNSEGQLGLGHTN 4420

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                PT+V   +     Q+S G  H+ A
Sbjct: 4421 HVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 162/349 (46%), Gaps = 39/349 (11%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           G     ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  
Sbjct: 364 GGDAPVVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFV 419

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGG 196
           I+ DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G
Sbjct: 420 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 479

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDE 255
           +V SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E
Sbjct: 480 EVFSWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGS 314
           +G +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G 
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG 590

Query: 315 NENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
            +NG LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   
Sbjct: 591 GDNGKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACL 646

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G  S +  +             + P ++      + + +S G +H  AL
Sbjct: 647 GCGSSEATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 682



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 129/283 (45%), Gaps = 32/283 (11%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +GQL    + A V P P+   C +    +Q   G   +  +   G VL+ G
Sbjct: 4089 DVFLWGAGRHGQLAEAGRNA-VSPPPSPSFCQA----QQVICGQNCTFVIQANGTVLACG 4143

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGRV 259
             G  GRLG G    +         +   +I  L+G  V   + + G   HS  + E+G V
Sbjct: 4144 EGSYGRLGQGNSDDL---------HVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEV 4194

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+G+ +
Sbjct: 4195 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4253

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
             G LG+G+      PERV        + +V+CG  HT  +S    + W +G        D
Sbjct: 4254 YGRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVSTDGSMVWAFG--------D 4304

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G    G+LG GN      P  V+    +   +V+CG   + AL
Sbjct: 4305 GDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 484 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 543

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 544 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 600

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G     G  + +++   
Sbjct: 601 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 656

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                   P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 657 -------RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 696



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 645

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 646 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 705

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 706 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 747



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 537 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 594

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 595 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 651

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 652 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 703

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 704 --STGPITKPKKVSGLDGVAIQQISAGTSHS 732



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +  + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +
Sbjct: 367 APVVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 426

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWG 365
              G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG
Sbjct: 427 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWG 485

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
            G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 486 DGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  +  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G  V ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L   + E+V  G  HT  L+S G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 4265 -NRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIS 4323

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   + Q+S G  H+AA
Sbjct: 4324 A-LQGKNIQQISAGRCHSAA 4342



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 423 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGD 481

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 482 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 541

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP  T V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 542 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 597

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 598 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 647

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 648 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 707

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 708 IG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G +++ G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
            LG+       L P R+S L+  +V Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+LIS L
Sbjct: 4319 PTLISAL 4325



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 169/385 (43%), Gaps = 36/385 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P +  +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNILVPTLAPSFSQA--QQVVCGQNCTFVIQANGTVSACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ S+G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG +V   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4159 --------KKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4211 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHNRPQQV 4270

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT  +S  G +  WG             +S GQLG G+     
Sbjct: 4271 PA-LTGVFIEDVAVGAEHTLTLSSTGDVYAWG------------SNSEGQLGLGHTNHVR 4317

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             PT+++  +     Q+S G  H+ A
Sbjct: 4318 EPTLISALQGKNIQQISAGRCHSAA 4342



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISSDG 417

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 418 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSW 477

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 478 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 528

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 529 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 588

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 589 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 644

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 645 EATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 675



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            +SG+ ++V+  +T       +    ++++WG   +GQL    +A + I +PT     S  
Sbjct: 3958 VSGMDEQVMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNILVPTLAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G V + G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVVCGQNCTFVIQANGTVSACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+++G+ + G LG+G+      PERV        V QV+CG  
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSA-LEGHQVGQVACGLN 4181

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S   +  W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4182 HTLAVSADGMTVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4231

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4232 GTQFSVAL 4239



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 477 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 536

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 537 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 593

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 594 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 648

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 649 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 689



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 638

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 639 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 698

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 699 GPITK-PKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 740



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 530 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 587

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 588 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 644

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 645 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 696

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 697 --STGPITKPKKVIGLDGVAIQQISAGTSHS 725



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
            +A + E   VY++G  +  +++        +P L      ++ +  G Y T V++S G 
Sbjct: 359 EAAMVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISSDGS 418

Query: 309 LYTWGSNENGCLGIGSID-------VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
           +   G    G LG+G  +       +   P R     S S   + S G  HT A  SEG+
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSS---KGSDG--HTLAFTSEGE 473

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 419
           + +WG G              G+LGHGN     +P ++      K +  VS G+ H+ A+
Sbjct: 474 VFSWGDGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAV 521

Query: 420 LE 421
            E
Sbjct: 522 SE 523


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 179/364 (49%), Gaps = 32/364 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E     V C   F+K S ++ +ACG  +T+ +T  G +Y+ G ND+
Sbjct: 36  WGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDY 95

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +++ G +H+ A+   G+L+ WG NS GQLGL  
Sbjct: 96  GQLG-HERGRKRLQ--LILGLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQLGLNS 152

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K       P  V+ L      Q A G + ++A+T  G++ SWG+   G+LG G +     
Sbjct: 153 KNFMECS-PRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR--- 208

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                SE  P+LI  L GV +   A G  HS  I ++G ++ +G     ++   +  +  
Sbjct: 209 -----SEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRN 263

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS +    P +V   
Sbjct: 264 LPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVM-E 322

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S V Q+SCG +HT A+  S+G++  WG GG+            GQLG+ +      P
Sbjct: 323 LMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA------------GQLGNNSTRSIPTP 370

Query: 396 TIVN 399
            +V+
Sbjct: 371 QVVH 374



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 137/298 (45%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG      R + ++    +    K +ACG  HT+ + E G +++ G N  GQL
Sbjct: 91  GNNDYGQLGHERGRKRLQLIL--GLDAFVFKKVACGAYHTIAVNEWGQLFSWGSNSEGQL 148

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    +VQ++ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 149 GLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 208

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P  +  L+G+     A G   S+A++  G +  WG    G+LG            
Sbjct: 209 SEVK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 258

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   K+  AA G   S  +  +G V+  G     ++     N+   P 
Sbjct: 259 TQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 318

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 319 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGP 376



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 163/346 (47%), Gaps = 41/346 (11%)

Query: 86  LTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
           L + G ++  G    G+LG   I + I   L P ++   K  E+ QI+ G +++  IT D
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEI--ILVPCQVDFKKASEIQQIACGENYTVVITHD 84

Query: 142 GELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           G++Y  G N  GQLG   G+K  ++I        L     K+ A G   ++AV   G++ 
Sbjct: 85  GKIYSCGNNDYGQLGHERGRKRLQLIL------GLDAFVFKKVACGAYHTIAVNEWGQLF 138

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           SWG+   G+LG   ++ +        E +PR++K L    +   A G  H+  +  NG +
Sbjct: 139 SWGSNSEGQLGLNSKNFM--------ECSPRMVKTLGTSIIVQVACGMKHALALTNNGEL 190

Query: 260 YIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           Y +G  +  ++ L  +     +P LI+ L   P +  + CGGYH+  ++  G ++ WG N
Sbjct: 191 YSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAF-IACGGYHSIAISKSGAIFGWGKN 249

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
             G LG+      + P ++Q     + +   +CG + +  ++ +G + T G G       
Sbjct: 250 TFGQLGLNDTQNRNLPHQLQT-LRNAKICYAACGEEFSVFLTVDGGVFTCGAGMY----- 303

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                  GQLGHG++ + I P  V         Q+SCG  HT AL+
Sbjct: 304 -------GQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 167/320 (52%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3584

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3585 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGN 3643

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   +VAV+  G  V ++G G  G+LG G      
Sbjct: 3644 TSNK--KLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGN----- 3696

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3697 ----STAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3752

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  +  L   + E++  G  HT  L+S G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 3753 -NRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 3811

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   + Q+S G  H+AA
Sbjct: 3812 V-LQGKNIRQISAGRCHSAA 3830



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3579 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGR 3638

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A+++DG + + +G    G+LGLG  
Sbjct: 3639 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNS 3697

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 3698 TAK--SSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 3747

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 3748 -RARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVRE 3806

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 3807 PTLITVL 3813



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 174/390 (44%), Gaps = 46/390 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   PV   +F +   + + CG   T  +   G V A G   +G
Sbjct: 3474 LWGAGRHGQLAEAG-RNVMVPVAAPSFSQA--QQVVCGQNCTFVIQANGTVLACGEGSYG 3530

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3531 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 3589

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 3590 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSN- 3646

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 3647 --------KKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNST 3698

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 3699 AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 3758

Query: 335  ---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
                G F    ++ ++ G +HT A+S  G +  WG             +S GQLG G+  
Sbjct: 3759 PVLSGVF----IEDIAVGAEHTLALSSTGDVYAWG------------SNSEGQLGLGHTN 3802

Query: 391  DYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                PT++    G+N++  Q+S G  H+ A
Sbjct: 3803 HVREPTLITVLQGKNIR--QISAGRCHSAA 3830



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3446 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPVAAPSFSQ- 3501

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3502 -AQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3551

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3552 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3610

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+T+ G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 3611 QMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 3669

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 3670 HTVAVSMDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDILCGIGIKKVAC 3719

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 3720 GTQFSVAL 3727



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G     G  + +++   
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                   P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATALR-PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVSIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 175/379 (46%), Gaps = 31/379 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R  PV  S      + A+A GG HT  LT +G V+  G N +GQ
Sbjct: 179 WGDNYYGQLGDGTTTNRRTPVAVSGLPS-GVTAIAAGGLHTCALTGSGEVWCWGYNYYGQ 237

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P  + GL   +  I+ G  H+ A+   G ++ WG+N +GQLG G    
Sbjct: 238 LGDGTTTYSRSTPAAVGGLPSGMTAIAAGGLHTCALMSSGGVWCWGRNDSGQLGDGSDTD 297

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+   V  L    T  AA G   + A+TG G+V  WG  G G+LG G          
Sbjct: 298 SSTPV--AVSGLPSGVTAIAA-GDYHTCALTGSGEVWCWGGNGFGQLGDGT--------- 345

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V+  AAG  H+  +  +G V+ +G     ++          P+
Sbjct: 346 TTARSTPAAVSGLP-SGVETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPA 404

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  GG HTC L S G ++ WG N +G LG GS     +P  V G    S
Sbjct: 405 AVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSG--LAS 462

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V+ ++ G  HT A+ S G +  W            G ++ GQLG G+ + +I P  V+ 
Sbjct: 463 GVETIAAGGWHTCALTSSGGVWCW------------GRNNSGQLGDGSTIYHITPVAVS- 509

Query: 401 GENVKALQVSCGFNHTGAL 419
           G       ++ G  HT AL
Sbjct: 510 GLPSGVTAIAAGDYHTCAL 528



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 168/358 (46%), Gaps = 31/358 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS      PV  S      ++ +A GG HT  LT +G V+  G N+ GQ
Sbjct: 435 WGLNNSGQLGDGSDTDSSTPVAVSGLAS-GVETIAAGGWHTCALTSSGGVWCWGRNNSGQ 493

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I Y + P+ +SGL   V  I+ G +H+ A+T  G ++ WG N +GQLG G    
Sbjct: 494 LGDGSTI-YHITPVAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGYNLSGQLGDGTTTD 552

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+   T  AA  F  + A+T  G V  WGA   G+LG G          
Sbjct: 553 RSTPV--AVSGLTSGVTVIAAGRF-HTCALTSSGGVWCWGANFDGQLGDGT--------- 600

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L      IAA G+ H+  +  +G V+ +GD    ++      +   P 
Sbjct: 601 TTNRTTPVAVSGLPSGVTAIAAGGW-HTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPG 659

Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  G+ HTC LTS GE++ WG N  G LG G+     +P  V G    S
Sbjct: 660 AVSGLPSGVTAIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSG--LPS 717

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            V  ++ G  HT A++  G ++ W            G++  GQLG G  +    P  V
Sbjct: 718 GVTAIAAGVYHTCALTGSGGVMCW------------GNNGDGQLGDGRPLYRTTPVDV 763



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 174/387 (44%), Gaps = 43/387 (11%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LG G+   SR  P          + A+A GG HT  L  +G V+  G ND G
Sbjct: 230 WGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSGGVWCWGRNDSG 288

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   +   S  P+ +SGL   V  I+ G +H+ A+T  GE++ WG N  GQLG G   
Sbjct: 289 QLGDGSDTDSS-TPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTT 347

Query: 162 AKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           A+  P     +P+ VE +        A G   + A+   G V  WG   SG+LG G    
Sbjct: 348 ARSTPAAVSGLPSGVETI--------AAGDYHTCALMSSGGVWCWGRNNSGQLGDGT--- 396

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +T+  TP  +  L      IAA G LH+  +  +G V+ +G     ++      
Sbjct: 397 ------TTARSTPAAVSGLPSGVTAIAAGG-LHTCALMSSGGVWCWGLNNSGQLGDGSDT 449

Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +  P  +S L    E +  GG+HTC LTS G ++ WG N +G LG GS     +P  V 
Sbjct: 450 DSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVS 509

Query: 336 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           G    S V  ++ G  HT A++  G +  WG            ++  GQLG G   D   
Sbjct: 510 G--LPSGVTAIAAGDYHTCALTGSGGVWCWG------------YNLSGQLGDGTTTDRST 555

Query: 395 PTIVNFGENVKALQVSCGFNHTGALLE 421
           P  V+ G       ++ G  HT AL  
Sbjct: 556 PVAVS-GLTSGVTVIAAGRFHTCALTS 581



 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 123/381 (32%), Positives = 169/381 (44%), Gaps = 31/381 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+  +R  P   S      + A+A G  HT  LT +G V   G N  GQ
Sbjct: 77  WGGNDFGQLGDGTPTTRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSGGVRCWGANYSGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G S  P  +SGL   V  I+ G  H+ A+   G +  WG N  GQLG G    
Sbjct: 136 LGNGLTFGRS-TPGAVSGLPSGVTAIAAGGDHTCALMSSGGVMCWGDNYYGQLGDGTTTN 194

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+TG G+V  WG    G+LG G  +    + R
Sbjct: 195 RRTPV--AVSGLPSGVTAIAAGGL-HTCALTGSGEVWCWGYNYYGQLGDGTTT----YSR 247

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S    TP  +  L      IAA G LH+  +  +G V+ +G     ++       +  P 
Sbjct: 248 S----TPAAVGGLPSGMTAIAAGG-LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPV 302

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  G YHTC LT  GE++ WG N  G LG G+     +P  V G    S
Sbjct: 303 AVSGLPSGVTAIAAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSG--LPS 360

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V+ ++ G  HT A+ S G +  W            G ++ GQLG G       P  V+ 
Sbjct: 361 GVETIAAGDYHTCALMSSGGVWCW------------GRNNSGQLGDGTTTARSTPAAVS- 407

Query: 401 GENVKALQVSCGFNHTGALLE 421
           G       ++ G  HT AL+ 
Sbjct: 408 GLPSGVTAIAAGGLHTCALMS 428



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 165/364 (45%), Gaps = 41/364 (11%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A GGAHT  LT +G V   G NDFGQLG       S  P  +SGL   
Sbjct: 47  SSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRS-TPGAVSGLPSG 105

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
           V  I+ G +H+ A+T  G +  WG N +GQLG G    +  P     +P+ V  +     
Sbjct: 106 VTAIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAI----- 160

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G + + A+   G V+ WG    G+LG G          +T+  TP  +  L    
Sbjct: 161 ---AAGGDHTCALMSSGGVMCWGDNYYGQLGDGT---------TTNRRTPVAVSGLPSGV 208

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYS-EEVVCGG 297
             IAA G LH+  +  +G V+ +G     ++      ++R  P+ +  LP     +  GG
Sbjct: 209 TAIAAGG-LHTCALTGSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGG 267

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            HTC L S G ++ WG N++G LG GS     +P  V G    S V  ++ G  HT A++
Sbjct: 268 LHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSG--LPSGVTAIAAGDYHTCALT 325

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            G    W WGG+   F        GQLG G       P  V+ G       ++ G  HT 
Sbjct: 326 -GSGEVWCWGGNG--F--------GQLGDGTTTARSTPAAVS-GLPSGVETIAAGDYHTC 373

Query: 418 ALLE 421
           AL+ 
Sbjct: 374 ALMS 377



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 2/136 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R  P   S      + A+A G  HT  LT +G V+  G N +GQ
Sbjct: 639 WGDNYYGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGWEHTCALTSSGEVWCWGDNYYGQ 697

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G +  WG N +GQLG G+   
Sbjct: 698 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 756

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 757 RTTPVDVVTSASWGVY 772


>gi|452818724|gb|EME25942.1| regulator of chromosome condensation [Galdieria sulphuraria]
          Length = 383

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 189/380 (49%), Gaps = 36/380 (9%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLE 114
           S +RP + ++ +  S++ +ACG   TLF+T+ G VY++G+  +GQLG   + E  G +L 
Sbjct: 19  SVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGITL- 77

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
              I  + ++V+  + G  HS  +T  G LY  G    G+LGLG   ++ +  P  VE L
Sbjct: 78  ---IDSIPEKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLG-TISRRMETPQLVESL 133

Query: 175 SGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL------RSTSE 226
           +    K  + A G   S+A++  GKV S+G+   G LGHG+    + FL          E
Sbjct: 134 AREEEKIIKVAAGHGFSIALSESGKVYSFGSANDGHLGHGEVPGGI-FLWEPFHSHRNME 192

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            +PRLI+ LE  +++  + G  H+  I++ G  + +G             +  +P  +  
Sbjct: 193 TSPRLIRALEKEQMEYISCGSGHAFAINKEGVAFGWGCGRYHCFATDNEVNWEQPQALFH 252

Query: 287 LPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF---SESP 342
           LP   +++V GG HT  LT GG+++ WG N  GCLG+G         R+       ++ P
Sbjct: 253 LPGPWKQIVSGGAHTLGLTKGGQVWAWGVNHFGCLGVGEQRTSPGEPRIVEKLLQQAKEP 312

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF- 400
           +  ++ GW  + A+ SEG + +WG           GH+  G LG G + D   P  +   
Sbjct: 313 IQWIAAGWFFSMAVDSEGYVYSWG----------RGHA--GALGTGEEEDKWEPVAIQNE 360

Query: 401 -GENVKALQVSCGFNHTGAL 419
            GE ++  ++  GFN+  A+
Sbjct: 361 QGEPLQVDRIYAGFNYAIAV 380



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 24/212 (11%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +TS Y P+++  L+   ++  A G   +  + + G+VY  G     ++           +
Sbjct: 17  ATSVYRPKIVASLQNKSIRDVACGQGFTLFVTQQGQVYSSGVGRYGQLGLGSLKEVEGIT 76

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPERVQG-P 337
           LI  +P  E+V+    G  H+  +T  G LY+ G  + G LG+G+I   + +P+ V+   
Sbjct: 77  LIDSIP--EKVITCAAGDRHSLFVTEQGHLYSCGYGKRGELGLGTISRRMETPQLVESLA 134

Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG---------HG 387
             E  + +V+ G   + A+SE GK+ ++G        + DGH   G++          H 
Sbjct: 135 REEEKIIKVAAGHGFSIALSESGKVYSFG-------SANDGHLGHGEVPGGIFLWEPFHS 187

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +      P ++   E  +   +SCG  H  A+
Sbjct: 188 HRNMETSPRLIRALEKEQMEYISCGSGHAFAI 219


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4096

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4097 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4155

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4156 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4208

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4209 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4264

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4265 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4323

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4324 VLQG----KNIRQISAGRCHSAA 4342



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4091 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4150

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4151 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4210 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4259

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4260 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4318

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4319 PTLVTVL 4325



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3986 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4042

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4043 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4101

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4102 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4158

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4159 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4210

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4211 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4270

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4271 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4317

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4318 EPTLVTVLQGKNIR--QISAGRCHSAA 4342



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G     +  S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3958 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4013

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4014 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4063

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4064 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4122

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4123 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4181

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4182 HTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4231

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4232 GTQFSVAL 4239



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4103

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4104 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4162

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G V+ ++G G  G+LG G      
Sbjct: 4163 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGN----- 4215

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4216 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4271

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4272 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4330

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4331 VLQG----KNIRQISAGRCHSAA 4349



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4098 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4157

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG  ++ +G    G+LGLG  
Sbjct: 4158 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNS 4216

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4217 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4266

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4267 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4325

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4326 PTLVTVL 4332



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3993 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4050 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4108

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4109 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4165

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV-YIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G V + FGD    K+      
Sbjct: 4166 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNST 4217

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4218 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4277

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4278 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4324

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4325 EPTLVTVLQGKNIR--QISAGRCHSAA 4349



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 158/344 (45%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G     +  S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3965 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4020

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4021 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4070

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4071 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4129

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4130 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4188

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4189 HTLAVSADGSVVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4238

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4239 GTQFSVAL 4246



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 115/323 (35%), Positives = 167/323 (51%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV T G  V ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP L+ +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTVL 4339



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4284

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4285 PV-LAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4331

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4332 EPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P +V      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLVEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4196 HTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4245

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4246 GTQFSVAL 4253



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+L++EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  +  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  VE L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 172/365 (47%), Gaps = 31/365 (8%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN   G+LG+G      + P +C  F    LK +ACGG HTLFL + G VY  G N  G
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  +  G S  P  +  L  +++  +S G  HS A+   G++++WG    GQLGL + 
Sbjct: 64  QLG-HDKAGNS--PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGL-ET 119

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A   + IP  ++ L      Q   G +  +A++  G++ +WG   SG+LG G+       
Sbjct: 120 AETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK------- 172

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              TS+ +P  +K L G+ +    AG  H   +  +G V+ +G     ++   +      
Sbjct: 173 -GETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S+ VV   CG  HT  LT  G L+T+G    G LG GS +    P RV   
Sbjct: 232 PCHI-KFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVM-E 289

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHP 395
              + V Q++CG  HT A          +  S GT    G +S GQLG G   D+   HP
Sbjct: 290 LMGTEVSQITCGRHHTLA----------FVPSSGTVYAFGCNSHGQLGTGILADLRSPHP 339

Query: 396 TIVNF 400
              +F
Sbjct: 340 VKNDF 344



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 111/225 (49%), Gaps = 14/225 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG GD G+LGL + E+  R P +      HS+  + CG  H + L+  G ++  G N  
Sbjct: 106 VWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSS 165

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ +     L P  +  L    + QI+ G  H  A+++ G ++ WGKN  GQLGL  
Sbjct: 166 GQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLND 225

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  +   +P  ++ L        + G E + A+T  G + ++G G  G+LGHG       
Sbjct: 226 KQDRA--VPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGS------ 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
              S +E  PR + EL G +V     G  H+ A +  +G VY FG
Sbjct: 278 ---SNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAFG 319



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 132/278 (47%), Gaps = 30/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +GQLG+G +   V   P      SG   K+ A G + ++ +   G V + G+   
Sbjct: 4   WGNARDGQLGIGVEGNPVFE-PRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +  +           +P L+  L+  K+ + + G  HS  ++E G+V+++G   
Sbjct: 63  GQLGHDKAGN-----------SPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGD 111

Query: 267 VDKMLFQEGNHARR-PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++  +    A R P L+ KL  +S  +VVCG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 GGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLG 171

Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             +    SP  V+   +  P+ Q++ G  H  A+S  G +  WG             +  
Sbjct: 172 KGETSKLSPSPVKS-LAGIPLAQITAGGDHCFALSLSGAVFGWG------------KNKA 218

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  +  D   P  + F  + + + +SCG  HT AL
Sbjct: 219 GQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAAL 256



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 42/331 (12%)

Query: 101 GQLGISENIGYSLEPLRI------SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           GQLGI        EP RI       GLK    +++ G  H+  +  DG +Y  G NS GQ
Sbjct: 10  GQLGIGVEGNPVFEP-RICHVFSGRGLK----EVACGGQHTLFLLQDGSVYTCGSNSCGQ 64

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG  K        P  V  L        + G   SVAV   G+V  WGAG  G+LG   E
Sbjct: 65  LGHDKAGNS----PELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLG--LE 118

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           ++       T+   PRL+K+L    +     G  H   +  +G+++ +G  +  ++   +
Sbjct: 119 TA------ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGK 172

Query: 275 GNHAR-RPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           G  ++  PS +  L   P ++ +  GG H   L+  G ++ WG N+ G LG+        
Sbjct: 173 GETSKLSPSPVKSLAGIPLAQ-ITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAV 231

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  ++   S+  V  +SCG +HTAA+++ G + T+G G            S GQLGHG+ 
Sbjct: 232 PCHIKFLRSQRVV-YISCGDEHTAALTKSGGLFTFGDG------------SRGQLGHGSS 278

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            + + P  V      +  Q++CG +HT A +
Sbjct: 279 NNELLPRRVMELMGTEVSQITCGRHHTLAFV 309


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 48/367 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 353

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 354 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 412

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 413 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 463

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 464 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 521

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D   +P RV+G   +S V++++CG  H 
Sbjct: 522 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHV 580

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +   ++CG
Sbjct: 581 AVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 628

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 629 TNFTAAV 635



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 319 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 378

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 379 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 437

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 438 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 495

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 496 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 542

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 543 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 602

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G +D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 603 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 635



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 42/271 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 285 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 335

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 336 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 393

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P  V       
Sbjct: 394 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 453

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHGN
Sbjct: 454 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGN 500

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 501 KEPKLVPTCVAALVEPNFCQVACGHSLTVAL 531



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 286 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 345

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 346 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 404

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 405 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPREVDSLKGL 452

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 453 RTVRAACGVWHTAAVVEVM 471


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 179/367 (48%), Gaps = 48/367 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D   +P RV+G   +S V++++CG  H 
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KTPNRVEGKLHKSFVEEIACGAYHV 593

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +   ++CG
Sbjct: 594 AVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 642 TNFTAAV 648



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 556 PVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G +D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 616 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 648



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 42/271 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P  V       
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 466

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHGN
Sbjct: 467 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGN 513

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 514 KEPKLVPTCVAALVEPNFCQVACGHSLTVAL 544



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 418 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPREVDSLKGL 465

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 466 RTVRAACGVWHTAAVVEVM 484


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4106

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4107 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4165

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4166 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4218

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4219 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4275 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4333

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4334 VLQG----KNVRQISAGRCHSAA 4352



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4101 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4160

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4161 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4219

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4220 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4269

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4270 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4328

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4329 PTLVTVL 4335



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3996 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4052

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4053 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4111

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4112 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4168

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4169 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4221 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4280

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4281 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4327

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4328 EPTLVTVLQGKNVR--QISAGRCHSAA 4352



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           G LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           S +  +             + P ++      + + +S G +H  AL
Sbjct: 648 SSEATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3968 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4023

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4024 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4073

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4074 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4132

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4133 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4191

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4192 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4241

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4242 GTQFSVAL 4249



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4339 VLQG----KNVRQISAGRCHSAA 4357



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTVLQGKNVR--QISAGRCHSAA 4357



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           G LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  
Sbjct: 592 GKLGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           S +  +             + P ++      + + +S G +H  AL
Sbjct: 648 SSEATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 166/324 (51%), Gaps = 21/324 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG  + ++R  PV  +      + ++  G  H+L +   G V+A G N  GQ
Sbjct: 122 WGNNAYGQLGDDTRDNRTVPVQVTGLS--GVVSVVAGDTHSLAVRSDGSVWAWGRNTSGQ 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P++++GL   VV ++ G +HS A+  DG ++ WG N++GQLG   +AA
Sbjct: 180 LGDGTRDDRAV-PVQVTGLSG-VVSVAAGGNHSLAVRSDGSVWAWGNNASGQLGGAPEAA 237

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +VE +SG+     A G   S+AV   G V +WG    G+LG G+       L 
Sbjct: 238 --YPVPWRVEDVSGVVA--VAAGQYHSLAVRYDGTVWAWGDNLYGQLGDGK-------LE 286

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             S + P+ +  L GV     +AGF HS  +  +G V+ +G+ A  ++      HA  P 
Sbjct: 287 GNSRWLPKQVPGLGGVVA--VSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRAHAASPV 344

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +  +  V  G  H+ V+ S G L+ WGSN +G  G G++    +P RV G    S 
Sbjct: 345 QVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPTPGRVPG---LSG 401

Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
           V  V+ G  H  A +S+G +  WG
Sbjct: 402 VVSVAAGGGHVLALLSDGTVWAWG 425



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 152/341 (44%), Gaps = 30/341 (8%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           ++A GG H L L   G V+A G N  GQLG        + P ++  L   VV ++ G   
Sbjct: 404 SVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRHSRWV-PRQVPELSG-VVAVAAGSSF 461

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N+ GQLG G   A  +P+   V  LS +     A G   ++AV  
Sbjct: 462 SLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPL--HVRELSEVVA--VAAGSMHALAVRA 517

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V  WG    G+LG G E        S   Y+P  +  L G+ V +AA  F HS  + 
Sbjct: 518 DGTVWGWGFNDYGQLGDGFEGI------SARRYSPVQVPGLSGM-VSVAAD-FGHSLAVR 569

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWG 313
            +G V+ +G+   D  L       R   L    P +  ++  GY ++  + + G L+ WG
Sbjct: 570 ADGTVWAWGNN-TDSELGDGTTTRRLVPLRVNAPGTVALLSAGYNYSMAMRADGSLWAWG 628

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
           +N  G LG GS      P RVQGP   S    ++ G  H+ A+     L W WG     F
Sbjct: 629 TNFAGQLGDGSTTSRAVPVRVQGPVRAS---TLAAGQSHSMAVGSDGFL-WAWG-----F 679

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + +     GQLG G    +  P  V     V A+ V+   +
Sbjct: 680 NFE-----GQLGDGTLTHHALPVRVPGMSGVVAVDVTLNLS 715



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 156/345 (45%), Gaps = 51/345 (14%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L +   G V+ TG N  GQLG    +     P+++ GL   V  ++ G+ HS A+  D
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRR-TPVQVQGLSG-VAAVAAGHGHSLALRYD 116

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+ GQLG   +  + +P+  +V  LSG+ +  A  G   S+AV   G V +W
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPV--QVTGLSGVVSVVA--GDTHSLAVRSDGSVWAW 172

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SG+LG G                P  +  L GV V +AA G  HS  +  +G V+ 
Sbjct: 173 GRNTSGQLGDGTRD---------DRAVPVQVTGLSGV-VSVAAGGN-HSLAVRSDGSVWA 221

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEE-------VVCGGYHTCVLTSGGELYTWGS 314
           +G+ A        G     P     +P+  E       V  G YH+  +   G ++ WG 
Sbjct: 222 WGNNA-------SGQLGGAPEAAYPVPWRVEDVSGVVAVAAGQYHSLAVRYDGTVWAWGD 274

Query: 315 NENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
           N  G LG G +  +    P++V G      V  VS G+ H+  + S+G +  W       
Sbjct: 275 NLYGQLGDGKLEGNSRWLPKQVPG---LGGVVAVSAGFYHSLVVRSDGTVWAW------- 324

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                G+++ GQLG G+      P  V  G +  A+ V+ G+ H+
Sbjct: 325 -----GNNAYGQLGGGSRAHAASPVQV-LGVS-GAVAVAAGYRHS 362



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 130/285 (45%), Gaps = 28/285 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS ++    V     E   + A+A G  H L +   G V+  G ND+GQ
Sbjct: 474 WGDNAYGQLGHGSTDAS--SVPLHVRELSEVVAVAAGSMHALAVRADGTVWGWGFNDYGQ 531

Query: 103 LGIS-ENI-GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   E I      P+++ GL   +V ++  + HS A+  DG ++ WG N++ +LG G  
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSG-MVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTT 590

Query: 161 AAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             +++P+    P  V  LS         G+  S+A+   G + +WG   +G+LG G    
Sbjct: 591 TRRLVPLRVNAPGTVALLSA--------GYNYSMAMRADGSLWAWGTNFAGQLGDGS--- 639

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 +TS   P  ++    V+    AAG  HS  +  +G ++ +G     ++      
Sbjct: 640 ------TTSRAVP--VRVQGPVRASTLAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLT 691

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           H   P  +  +     V      +  + S G L+ WG+N+ G LG
Sbjct: 692 HHALPVRVPGMSGVVAVDVTLNLSLAVRSDGSLWAWGNNDVGQLG 736



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 8/182 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN     LG G+   R  P+  +A    ++  L+ G  +++ +   G ++A G N  GQ
Sbjct: 577 WGNNTDSELGDGTTTRRLVPLRVNA--PGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQ 634

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+R+ G  +    ++ G  HS A+  DG L+ WG N  GQLG G    
Sbjct: 635 LGDGSTTSRAV-PVRVQGPVRAST-LAAGQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTH 692

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+  +V  +SG+      L    S+AV   G + +WG    G+LG    + +   +R
Sbjct: 693 HALPV--RVPGMSGVVAVDVTLNL--SLAVRSDGSLWAWGNNDVGQLGTQPSTYVTTAVR 748

Query: 223 ST 224
           S+
Sbjct: 749 SS 750



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 31/234 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S+AV   G V + G  G G+LG G          + S  TP  ++ L GV     AAG 
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGT---------TLSRRTPVQVQGLSGVAA--VAAGH 107

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            HS  +  +G V+ +G+ A  ++     ++   P  ++ L     VV G  H+  + S G
Sbjct: 108 GHSLALRYDGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDG 167

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
            ++ WG N +G LG G+ D    P +V G    S V  V+ G  H+ A+ S+G +  W  
Sbjct: 168 SVWAWGRNTSGQLGDGTRDDRAVPVQVTG---LSGVVSVAAGGNHSLAVRSDGSVWAW-- 222

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK-ALQVSCGFNHTGAL 419
                     G+++ GQLG   +  Y  P  V   E+V   + V+ G  H+ A+
Sbjct: 223 ----------GNNASGQLGGAPEAAYPVPWRV---EDVSGVVAVAAGQYHSLAV 263


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4337 VLQG----KNVRQISAGRCHSAA 4355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4284 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4331 EPTLVTVLQGKNVR--QISAGRCHSAA 4355



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4195 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4244

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4245 GTQFSVAL 4252



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4100

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4101 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4159

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4160 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4212

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4213 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4268

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4269 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4327

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4328 VLQG----KNVRQISAGRCHSAA 4346



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4095 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4154

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4155 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4214 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4263

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4264 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4322

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4323 PTLVTVL 4329



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3990 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4046

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4047 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4105

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4106 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4162

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4163 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4214

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4215 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4274

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4275 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4321

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4322 EPTLVTVLQGKNVR--QISAGRCHSAA 4346



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3962 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4017

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4018 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4067

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4068 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4126

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4127 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4185

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4186 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4235

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4236 GTQFSVAL 4243



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4078

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4079 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4137

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4138 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4190

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4191 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4246

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4247 -NRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4305

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4306 VLQG----KNIRQISAGRCHSAA 4324



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 129/247 (52%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4073 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4132

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4133 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4191

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4192 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4241

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4242 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4300

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4301 PTLVTVL 4307



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3968 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4024

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4025 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4083

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4084 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4140

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4141 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4192

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4193 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4252

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4253 PV-LAGVVIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4299

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4300 EPTLVTVLQGKNIR--QISAGRCHSAA 4324



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3940 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3995

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3996 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4045

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4046 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4104

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4105 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4163

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4164 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4213

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4214 GTQFSVAL 4221



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4347

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4348 VLQG----KNVRQISAGRCHSAA 4366



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4234 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4343 PTLVTVL 4349



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4010 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4067 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4125

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4126 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4183 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4234

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4235 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4294

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4295 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4341

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4342 EPTLVTVLQGKNVR--QISAGRCHSAA 4366



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4037

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4205

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4206 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4255

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4256 GTQFSVAL 4263



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4339 VLQG----KNVRQISAGRCHSAA 4357



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4333 EPTLVTVLQGKNVR--QISAGRCHSAA 4357



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4116

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+++ +G    G+LGLG 
Sbjct: 4117 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGN 4175

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV T G  V ++G G  G+LG G      
Sbjct: 4176 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGN----- 4228

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4229 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4284

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L     E+V  G  HT  +TS G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 4285 -NRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4343

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4344 VLQG----KNIRQISAGRCHSAA 4362



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP L+ +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4111 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGR 4170

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4171 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNS 4229

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4230 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4279

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  I   G VY +G  +  ++     NH R 
Sbjct: 4280 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVRE 4338

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4339 PTLITVL 4345



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4006 LWGAGRHGQLAEAG-RNVMIPAGAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4062

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4063 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4121

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4122 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSN- 4178

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4179 --------KKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNST 4230

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4231 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4290

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT AI S G +  WG             +S GQLG G+     
Sbjct: 4291 PV-LAGVVIEDVAVGAEHTLAITSTGDVYAWG------------SNSEGQLGLGHTNHVR 4337

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT++    G+N++  Q+S G  H+ A
Sbjct: 4338 EPTLITVLQGKNIR--QISAGRCHSAA 4362



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 420

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 481 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 591

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           G LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  
Sbjct: 592 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 647

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           S +  +             + P +V      + + +S G +H  AL
Sbjct: 648 SSEATA-------------LRPKLVEELAATRIVDISIGDSHCLAL 680



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3978 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAGAPSFSQ- 4033

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4034 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4083

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4084 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4142

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+T+ G+++T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4143 QMSCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4201

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4202 HTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4251

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4252 GTQFSVAL 4259



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+L++EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  +  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  VE L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%), Gaps = 18/177 (10%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +  + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSV 424

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWG 365
              G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG
Sbjct: 425 RACGKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWG 483

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
            G              G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 484 DGDY------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 162/325 (49%), Gaps = 21/325 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      + SA +   +  L        H+L LTE+G V++ G  D+
Sbjct: 1046 GEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDY 1105

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+QI+ G+ HS+ +TVDG+L  +G    G+LGLG 
Sbjct: 1106 GKLG-HGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGT 1164

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
               +    P +V+ L        A G   +V V+  G    ++G G  G+LG G  S+  
Sbjct: 1165 VCNR--KTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSA-- 1220

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                   + TP  I+ L G+KVK  A G   S  +  +G V  +G DR + +   Q   H
Sbjct: 1221 -------KSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGH 1273

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
               P  ++ L   + EEVV G  HT  LTS G ++ WG N +G LG+G    +  P+ + 
Sbjct: 1274 CT-PQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLG 1332

Query: 336  GPFSESPVDQVSCGWKHTAAISEGK 360
            G  S  P+ Q+S G  H+AA S  K
Sbjct: 1333 GLGSSEPIKQISAGRTHSAAWSGAK 1357



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/253 (30%), Positives = 126/253 (49%), Gaps = 14/253 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  +ACG  H+  +T  G +   G  D+G+
Sbjct: 1100 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGR 1159

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
            LG+   +     P R+  L+   +  ++ G +H+  ++ DG   + +G    G+LGLG  
Sbjct: 1160 LGLG-TVCNRKTPERVKALENYHIGHVACGLNHTVCVSADGSTTWAFGDGDYGKLGLGNT 1218

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            +AK  P+  K+E LSG+  K+ A G + SVA+T  G VL+W   G  RL    E+ + G 
Sbjct: 1219 SAKSTPV--KIEALSGLKVKKVACGTQFSVALTRDGFVLTW---GQDRLIGQTEAQMRG- 1272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   TP+ +  L G  ++    G  H+  +  +G V+ +G  A  ++        R 
Sbjct: 1273 -----HCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVRE 1327

Query: 281  PSLISKLPYSEEV 293
            P L+  L  SE +
Sbjct: 1328 PQLLGGLGSSEPI 1340



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 32/306 (10%)

Query: 121  LKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++K+   I+    H     + G  + Y+WG   +GQL    +A + +  P      S   
Sbjct: 968  VQKDAAIIAWSVQHPDDWQMGGSCDAYLWGGGRHGQLC---EAGRSVLTPLHTSSFSS-- 1022

Query: 179  TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
             +Q   G   +  +   G VL+ G G  GRLG G    +         ++  ++  L+G 
Sbjct: 1023 AQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HSLTIVSALQGF 1073

Query: 239  KVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EV 293
             V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   E  ++
Sbjct: 1074 VVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQI 1133

Query: 294  VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             CG  H+ V+T  G+L T+G+ + G LG+G++    +PERV+       +  V+CG  HT
Sbjct: 1134 ACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHT 1192

Query: 354  AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
              +S     TW +G        DG    G+LG GN      P  +     +K  +V+CG 
Sbjct: 1193 VCVSADGSTTWAFG--------DG--DYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGT 1242

Query: 414  NHTGAL 419
              + AL
Sbjct: 1243 QFSVAL 1248


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4111

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4112 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4170

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4171 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4223

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4224 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4280 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4338

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4339 VLQG----KNIRQISAGRCHSAA 4357



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 165/334 (49%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G      L    E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4106 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4165

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4166 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4224

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4225 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4274

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4275 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4333

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4334 PTLVTVL 4340



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4001 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4057

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4058 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4116

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4117 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4173

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4174 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4225

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4226 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4285

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4286 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4332

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4333 EPTLVTVLQGKNIR--QISAGRCHSAA 4357



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 147/302 (48%), Gaps = 26/302 (8%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KMALSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DG 377
           + 
Sbjct: 650 EA 651



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3973 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4028

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4029 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4078

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4079 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4137

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4138 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4196

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4197 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4246

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4247 GTQFSVAL 4254



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G      +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSM 694



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 136/314 (43%), Gaps = 38/314 (12%)

Query: 121 LKKEVVQISTGYHHSSA------------ITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
           L +EV ++++ Y  + A            ++   E+Y+WG NS+ QL  G +  + I  P
Sbjct: 339 LFEEVCRMASDYSRTCASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQ--EKILQP 396

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                 S   T +A  G   +  ++  G V + G G  GRLG G +S+    L+  +   
Sbjct: 397 KMALSFSDAQTIEA--GQYCTFVISTDGSVRACGKGSYGRLGLG-DSNNQSTLKKLTFEP 453

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            R IK     KV  +     H+      G V+ +GD    K+     +  + P LI    
Sbjct: 454 HRSIK-----KVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPL 508

Query: 289 YSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             + VVC   GY H+  +T  GELYTWG  + G LG G  +  + P  V+     S V +
Sbjct: 509 QGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGE 565

Query: 346 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
           VSCG  HT A+S+     W +GG             G+LGHG+      P +V   + + 
Sbjct: 566 VSCGSSHTIALSKDGRTVWSFGG----------GDNGKLGHGDTNRVYKPKVVEALQGMF 615

Query: 406 ALQVSCGFNHTGAL 419
             +V  G   + AL
Sbjct: 616 IRKVCAGSQSSLAL 629



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 76/163 (46%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G     A+  D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A+    +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 40/174 (22%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P +      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4108

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4109 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4167

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4168 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGN----- 4220

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4221 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4276

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4277 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4335

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 4336 VLQG----KNVRQISAGRCHSAA 4354



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S++ ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4103 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4162

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4163 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNS 4221

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4222 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4271

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4272 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4330

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4331 PTLVTVL 4337



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3998 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4054

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4055 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4113

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4114 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4170

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4171 --------KKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNST 4222

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4223 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4282

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4283 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4329

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4330 EPTLVTVLQGKNVR--QISAGRCHSAA 4354



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3970 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4025

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4026 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4075

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4076 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4134

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4135 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4193

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4194 HTLAVSSDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4243

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4244 GTQFSVAL 4251



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IRKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2757

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2758 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2816

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 2817 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 2869

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 2870 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 2925

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 2926 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 2984

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 2985 VLQG----KNIRQISAGRCHSAA 3003



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2752 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2811

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 2812 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 2870

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 2871 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 2920

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 2921 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 2979

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 2980 PTLVTVL 2986



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2647 LWGAGRHGQLAEAG-RNVMVPATAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2703

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2704 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2762

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2763 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2819

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 2820 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 2871

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 2872 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 2931

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 2932 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 2978

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 2979 EPTLVTVLQGKNIR--QISAGRCHSAA 3003



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 2619 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 2674

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2675 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2724

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2725 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2783

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 2784 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 2842

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 2843 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 2892

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 2893 GTQFSVAL 2900


>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
 gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
            asteroides PRL2011]
          Length = 1160

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/408 (31%), Positives = 189/408 (46%), Gaps = 47/408 (11%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCS----AFEKHSLKALACGGAHTLFLTETGCVYAT 95
            A  WG  +YG+LG G+L  R +PV+      A    +   ++ G   +L +   G VYA 
Sbjct: 688  AYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGSDGYVYAW 747

Query: 96   GLNDFGQLGISENIGYSLEPLRI-------SGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            G N+ GQLG   + GYS  PLR+       SGL    VQ+S GY+HS A+   G ++ WG
Sbjct: 748  GNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLT--AVQVSAGYYHSLALDARGNIWAWG 805

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSG 207
             N  G+LG G      IP   +    +G  T  Q + GF  + A+   G   SWG    G
Sbjct: 806  FNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAIDTKGNTWSWGWNWFG 865

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LG+G  ++I   +    +Y PR    +  ++V   +AG  HS  ID  G  + +G   +
Sbjct: 866  QLGNG--NNIDSAIPVPVQY-PRDAGTVRAIQV---SAGADHSLIIDTKGNTWAWGWNQL 919

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGSNENGC 319
             ++     +    P +   + Y E        +V  GGYH+  +   G  + WG N++G 
Sbjct: 920  GELGNGSSSADANP-VPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGE 978

Query: 320  LGIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
            LGIG+      P  VQ P +   V   QVS G  H+  I  EGK  TW W          
Sbjct: 979  LGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGIDKEGK--TWAW---------- 1026

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL-LEYV 423
            G++  GQLG+G   +   PT V F  N+  +  S  F+ + A  L Y+
Sbjct: 1027 GYNQFGQLGNGTISNSSIPTPVAF--NLSQVISSVTFDTSPATNLNYI 1072



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 161/359 (44%), Gaps = 48/359 (13%)

Query: 83   TLFLTETGCVYATGLNDFGQLGISENIGYSLEPL---RISGLKKEV--VQISTGYHHSSA 137
            TL +   G  YA G N++GQLG    +    +P+   + +G   +   VQ+S G   S A
Sbjct: 679  TLAVGSDGNAYAWGRNNYGQLG-DGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLA 737

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVT 193
            +  DG +Y WG N +GQLG G        +P +V    +  SG+   Q + G+  S+A+ 
Sbjct: 738  VGSDGYVYAWGNNESGQLGNGSSGGYST-VPLRVIDPNDPRSGLTAVQVSAGYYHSLALD 796

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G + +WG    G LG+G  ++I   + + ++Y PR    +  ++V   + GF H+A I
Sbjct: 797  ARGNIWAWGFNQFGELGNG--NNINSAIPTLAQY-PRDAGTVTAIQV---SGGFHHTAAI 850

Query: 254  DENGRVYIFG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            D  G  + +G            +D  +     + R    +  +    +V  G  H+ ++ 
Sbjct: 851  DTKGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAI----QVSAGADHSLIID 906

Query: 305  SGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAISEGK 360
            + G  + WG N+ G LG G  S D    P  V+ P +   V   QVS G  H+ AI +  
Sbjct: 907  TKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYHSLAIDKNG 966

Query: 361  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFNHT 416
               W WGG          +  G+LG G       P +V + +N   V  +QVS G  H+
Sbjct: 967  N-AWAWGG----------NDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHS 1014



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 140/303 (46%), Gaps = 41/303 (13%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK-QAALGFEQSVAVTG 194
           A+  DG  Y WG+N+ GQLG G    +  P+  K     S  FT  Q + G EQS+AV  
Sbjct: 681 AVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGS 740

Query: 195 GGKVLSWGAGGSGRLGHGQE---SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            G V +WG   SG+LG+G     S++   LR      PR      G+     +AG+ HS 
Sbjct: 741 DGYVYAWGNNESGQLGNGSSGGYSTVP--LRVIDPNDPR-----SGLTAVQVSAGYYHSL 793

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------EVVCGGYHTCVLTS 305
            +D  G ++ +G     ++      ++  P+L ++ P         +V  G +HT  + +
Sbjct: 794 ALDARGNIWAWGFNQFGELGNGNNINSAIPTL-AQYPRDAGTVTAIQVSGGFHHTAAIDT 852

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAI-SEGKIL 362
            G  ++WG N  G LG G+      P  VQ P     V   QVS G  H+  I ++G   
Sbjct: 853 KGNTWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTVRAIQVSAGADHSLIIDTKGNTW 912

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGN---DVDYIHPTIVNFGEN---VKALQVSCGFNHT 416
            WGW            +  G+LG+G+   D + + P +V + EN   V A+QVS G  H+
Sbjct: 913 AWGW------------NQLGELGNGSSSADANPV-PGMVKYPENAGTVTAIQVSAGGYHS 959

Query: 417 GAL 419
            A+
Sbjct: 960 LAI 962



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 54/173 (31%)

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD----QVSCGWKHTAA 355
           T  + S G  Y WG N  G LG G++   + P  V+ P   S  D    QVS G + + A
Sbjct: 679 TLAVGSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGAS-ADFTYVQVSAGDEQSLA 737

Query: 356 I-SEGKILTWG-------WGGSHGTFS--------EDGHSSG------------------ 381
           + S+G +  WG         GS G +S         +   SG                  
Sbjct: 738 VGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLALDA 797

Query: 382 ------------GQLGHGNDVDYIHPTIVNFGEN---VKALQVSCGFNHTGAL 419
                       G+LG+GN+++   PT+  +  +   V A+QVS GF+HT A+
Sbjct: 798 RGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFHHTAAI 850


>gi|326432295|gb|EGD77865.1| ITCH protein [Salpingoeca sp. ATCC 50818]
          Length = 1207

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 184/390 (47%), Gaps = 31/390 (7%)

Query: 41  ALWGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A+WG    G+LG+G  +   + R  +  + E+  L  +A G  H+L +T +G VY TG N
Sbjct: 4   AVWGATGAGQLGIGDADGTGKTRVTLVPSLEQE-LAFVATGYYHSLAITRSGTVYTTGKN 62

Query: 99  DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           D  QLG S   G   +  R++ L+    V  + G   S  +   G++Y WG    GQLGL
Sbjct: 63  DRRQLGRS---GDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGGERGQLGL 119

Query: 158 GKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G++A +    +P  V+ L   F    A G    +A+T  G+V SWG G  G+LG GQ   
Sbjct: 120 GREAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQLGDGQ--- 176

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S ++P +I +L G  V   AAG  +S  +    +VY FG  +  ++   +  
Sbjct: 177 ------FVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTT 230

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPER 333
              RP+L+  L   +   V  G +HT   T  G LY WGSN+ G LG+GS  D + +P  
Sbjct: 231 ARFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEADSVAAPTE 290

Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED-GHSSGGQLGHGND--- 389
           +        V +VS G +HT A+    I T    G+  T +   G ++ GQLG   D   
Sbjct: 291 ITHILEIGRVLEVSAGRRHTVAL----IRTVTETGAQATVAVAFGANNTGQLGLDPDHPA 346

Query: 390 ---VDYIHPTIVNFGENVKALQVSCGFNHT 416
                  HP  +    ++  +++  G NHT
Sbjct: 347 SKRTQLFHPVRLKRISSMHPIKLIAGGNHT 376



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 106/234 (45%), Gaps = 25/234 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G   SR  P V +      + ++A G  ++L +T    VYA G N  GQ
Sbjct: 164 WGEGADGQLGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQ 223

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +       P  +  L  K+V  ++ G  H+ A T  G LY WG N  GQLGLG +A
Sbjct: 224 LGVGDTTA-RFRPTLVRFLDGKQVCHVTAGDFHTLARTRTGHLYAWGSNQWGQLGLGSEA 282

Query: 162 AKVIPIPTKV-------ECLSGIFTKQAALGFEQSVAVTGGGKV--LSWGAGGSGRLGHG 212
             V   PT++         L     ++  +   ++V  TG      +++GA  +G+LG  
Sbjct: 283 DSVA-APTEITHILEIGRVLEVSAGRRHTVALIRTVTETGAQATVAVAFGANNTGQLGLD 341

Query: 213 QESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
            +       + T  + P  +K +  +  +K+ A G         N  + IFG++
Sbjct: 342 PDHPA---SKRTQLFHPVRLKRISSMHPIKLIAGG---------NHTIMIFGEQ 383



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 106/267 (39%), Gaps = 57/267 (21%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V  WGA G+G+LG G      G  ++     P L +EL  V     A G+ HS  I  +G
Sbjct: 3   VAVWGATGAGQLGIGDAD---GTGKTRVTLVPSLEQELAFV-----ATGYYHSLAITRSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
            VY  G    D+          + + ++ L     V    G   + V+ S G++YTWG  
Sbjct: 55  TVYTTGKN--DRRQLGRSGDEHKWARVTPLETITAVAGAVGLDFSVVVDSTGKVYTWGGG 112

Query: 316 ENGCLGIGSIDVLHSPERVQGPFS---ESPVDQVSCGWKHTAAIS-EGKILTWGWGGS-- 369
           E G LG+G  + + +  RV  P      + V  V+CG +H  A++ +G++ +WG G    
Sbjct: 113 ERGQLGLGR-EAMETGSRVPRPVKGLGNAFVISVACGTRHCLALTRDGRVFSWGEGADGQ 171

Query: 370 --HGTFSED------------------------------------GHSSGGQLGHGNDVD 391
              G F                                       G +S GQLG G+   
Sbjct: 172 LGDGQFVSRHSPEVIADLRGKGVVSVAAGSTYSLAVTGADQVYAFGSNSKGQLGVGDTTA 231

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGA 418
              PT+V F +  +   V+ G  HT A
Sbjct: 232 RFRPTLVRFLDGKQVCHVTAGDFHTLA 258


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1722

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1723 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 1781

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 1782 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 1834

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 1835 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 1890

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 1891 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 1949

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   V Q+S G  H+AA
Sbjct: 1950 V-LQGKNVRQISAGRCHSAA 1968



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 1717 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 1776

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 1777 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 1835

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 1836 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 1885

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 1886 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 1944

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 1945 PTLVTVL 1951



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 1612 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 1668

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 1669 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 1727

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 1728 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 1784

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 1785 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 1836

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 1837 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 1896

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 1897 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 1943

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 1944 EPTLVTVLQGKNVR--QISAGRCHSAA 1968



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 1584 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 1639

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 1640 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 1689

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 1690 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 1748

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 1749 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 1807

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 1808 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 1857

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 1858 GTQFSVAL 1865


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4284 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4331 EPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4195 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4244

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4245 GTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4120

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4121 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4179

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4180 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4232

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4233 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4288

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4289 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4347

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4348 VLQG----KNIRQISAGRCHSAA 4366



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4115 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4174

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4175 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4233

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4234 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4283

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4284 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4342

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4343 PTLVTVL 4349



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4010 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4066

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4067 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4125

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4126 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4183 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4234

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4235 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4294

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4295 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4341

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4342 EPTLVTVLQGKNIR--QISAGRCHSAA 4366



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3982 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4037

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4038 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4087

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4088 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4146

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4147 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4205

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4206 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4255

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4256 GTQFSVAL 4263



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4284 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4331 EPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4195 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4244

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4245 GTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4284 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4331 EPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4195 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4244

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4245 GTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 174/341 (51%), Gaps = 26/341 (7%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG+   G+LG+ ++  ++ R V C   ++    +L   ACG  H+L L   G V++ G N
Sbjct: 5   WGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTVWSCGNN 64

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             GQLG      +   P +I  L+ +++V +S G  HS AI  +G ++ WG  S+GQLG+
Sbjct: 65  SCGQLGRKRCQKHG-RPAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGI 123

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K+  IP K++ LS     Q + G   S+A+   G+V SWG    G+LG G+    
Sbjct: 124 -REFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVP- 181

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF----Q 273
                  S+ +P+ +K L+G+ +   AAG  HS  +  +G  Y +G     ++      +
Sbjct: 182 -------SQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKE 234

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 +P  I +L   +   + CG  HT VLT  G+++T+GSN++G LG   I  +  P
Sbjct: 235 SAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQLISGMKGP 294

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGSH 370
           + V    S S   Q++CG  HT A S   G+++++G G   
Sbjct: 295 QVVDSAVSFS---QIACGSYHTLAYSCTTGQVISFGCGSQR 332



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 39/291 (13%)

Query: 145 YMWGKNSNGQLGL-GKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKV 198
           Y WG NS+GQLG+     AK       V C  G         QAA G   S+ +   G V
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKA----RAVRCRRGASLGNQTLLQAACGERHSLLLLSDGTV 58

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S G    G+LG           R      P  I+ LE   +   + G  HS  I + GR
Sbjct: 59  WSCGNNSCGQLGRK---------RCQKHGRPAQIQALETQDIVSVSCGKEHSLAICKEGR 109

Query: 259 VYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G  +  ++  +E    +  P  I +L   +  +V CG YH+  L   G +++WG N
Sbjct: 110 VFSWGSGSDGQLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQDGRVFSWGKN 169

Query: 316 ENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
            +G LG+G ++    SP+ V+      P+ QV+ G  H+ A+S     ++GW        
Sbjct: 170 NHGQLGLGENVPSQASPQWVKS-LDGIPLAQVAAGGAHSFALSFSGT-SYGW-------- 219

Query: 375 EDGHSSGGQL---GHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 421
             G ++ GQL   G     + I  P  +   + ++   +SCG  HT  L +
Sbjct: 220 --GRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQ 268


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4109

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4110 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4169 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4221

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4222 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4278 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4336

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4337 VLQG----KNIRQISAGRCHSAA 4355



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4104 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4163

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4164 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4222

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4223 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4272

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4273 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4331

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4332 PTLVTVL 4338



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3999 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4055

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4056 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4114

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4115 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4171

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4172 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4223

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4224 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4283

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4284 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4330

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4331 EPTLVTVLQGKNIR--QISAGRCHSAA 4355



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3971 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 4026

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4027 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4076

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4077 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4135

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4136 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4194

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4195 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4244

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4245 GTQFSVAL 4252



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 178/377 (47%), Gaps = 39/377 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G L  R  PV        S+ A+A GG H     + G ++  GLN +GQ
Sbjct: 949  WGLNSYGQLGGGPLSYRLLPVQVQGL--MSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQ 1006

Query: 103  LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG    +  SL P+++   GL   V  I+ G+ H+ A+  DG ++ WG N+ GQLG G  
Sbjct: 1007 LG-GGPLSQSLTPVQVQVQGLTG-VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTT 1064

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  + P+  +V+ L+G+    A  G   +VA+   G V +WG    G+LG G        
Sbjct: 1065 AQSLTPV--QVQGLTGVTAISA--GDAHTVALRRDGTVWAWGRNSWGQLGDG-------- 1112

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              +T   TP  ++ L GV + IAA G LH+  + ++G V+ +G  +  ++      H   
Sbjct: 1113 -TTTHRATPVQVQGLTGV-IAIAA-GSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRAT 1169

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            P  +  L     +  G  HT  L   G ++ WG N+ G LG G+     +P +VQG    
Sbjct: 1170 PVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQG---L 1226

Query: 341  SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            + V  ++ G+ HTAA+  +G   TW            G +  GQLG G   D   P  V 
Sbjct: 1227 TGVTTIAAGYFHTAAVRQDGTAWTW------------GFNLWGQLGDGTFTDRATPVQVQ 1274

Query: 400  FGENVKALQVSCGFNHT 416
                V AL  + G+ HT
Sbjct: 1275 GLTGVSAL--AAGYAHT 1289



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 174/374 (46%), Gaps = 37/374 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D G+LG G+   R+ PV           A+A G  HT+  ++ G V+  G N  GQ
Sbjct: 97  WGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQ 152

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +I     P+++ GL   V  ++ G +HS+A+   G ++ WG N  GQLG G    
Sbjct: 153 LGDGTSI-QRFSPVQVQGLTG-VTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQ 210

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V+ L+G+    A     ++VA+   G V +WG   SG+LG G          
Sbjct: 211 RLTPV--QVQGLTGVIAISA--NDSETVALRQDGTVWAWGNNSSGQLGDG---------T 257

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T  +TP  +  L GV    A  GF  +  + ++G ++ +G  +  ++       + RP 
Sbjct: 258 TTVRFTPVQVLGLTGVTAIAAGGGF--AVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPE 315

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +   G HT  L   G L+ WG+N +G LG G+  V  +P +VQG    + 
Sbjct: 316 QVQGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQG---LTG 372

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           V  ++ G+ +T A  +   + W W          G +  GQLG G     + P  V    
Sbjct: 373 VTAIAAGYLYTVASKQDGTV-WAW----------GDNEWGQLGDGTTTRRLTPVQVQGLT 421

Query: 403 NVKALQVSCGFNHT 416
            V A  ++ G+ +T
Sbjct: 422 GVTA--IAAGYLYT 433



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 168/363 (46%), Gaps = 45/363 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G+      PV         + A++ G AHT+ L   G V+A G N +GQ
Sbjct: 1051 WGGNAYGQLGDGTTAQSLTPVQVQGLT--GVTAISAGDAHTVALRRDGTVWAWGRNSWGQ 1108

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG      +   P+++ GL   V+ I+ G  H+ A+  DG ++ WG+NS GQLG G    
Sbjct: 1109 LGDGTTT-HRATPVQVQGLTG-VIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTH 1166

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V+ L+G+     A G   +VA+   G V +WG    G+LG G          
Sbjct: 1167 RATPV--QVQGLTGVIA--IAAGSLHTVALRQDGTVWAWGFNDLGQLGDG---------T 1213

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            +T   TP  ++ L GV     AAG+ H+A + ++G  + +G     ++   +G    R  
Sbjct: 1214 TTRRLTPAQVQGLTGVTT--IAAGYFHTAAVRQDGTAWTWGFNLWGQL--GDGTFTDRAT 1269

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GP 337
            P  +  L     +  G  HT V+   G ++ WG+N    LG GS     +P +V+   G 
Sbjct: 1270 PVQVQGLTGVSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGA 1329

Query: 338  FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            FS      ++ G  HT A+S      WGW          G ++ GQ+G G   D   PT 
Sbjct: 1330 FS------LAAGRFHTVAMSPDGA-GWGW----------GRNNLGQVGDGTTAD--RPTP 1370

Query: 398  VNF 400
            VN 
Sbjct: 1371 VNV 1373



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 174/385 (45%), Gaps = 31/385 (8%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            Q R    WG+  +G+LG G+   R  PV         + A+A GG H     + G ++  
Sbjct: 738  QDRTLWAWGDNHWGQLGDGTTTRRLTPVQVQGLMD--VTAMAAGGYHMAAAGQDGTLWTW 795

Query: 96   GLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GLN +GQLG    + Y L P+++ GL       I+ G  H+ A+  DG ++ WG N +GQ
Sbjct: 796  GLNSYGQLG-GGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G  A  + P+  +V+ L  + T  AA G+  + A    G + +WG    G+LG G  
Sbjct: 855  LGDGTTAQSLTPVQVQVQGLMDV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPL 912

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S  L          P  ++ L  + V   AAG  H A   ++G ++ +G  +  ++    
Sbjct: 913  SYRL---------LPVQVQGL--MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGP 961

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             ++   P  +  L     +  GGYH       G L+TWG N  G LG G +    +P +V
Sbjct: 962  LSYRLLPVQVQGLMSVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQV 1021

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            Q     + V  ++ G+ HT A+ +   + W WGG          ++ GQLG G     + 
Sbjct: 1022 Q-VQGLTGVAAIAAGFSHTLAVRQDGTV-WSWGG----------NAYGQLGDGTTAQSLT 1069

Query: 395  PTIVNFGENVKALQVSCGFNHTGAL 419
            P  V     V A  +S G  HT AL
Sbjct: 1070 PVQVQGLTGVTA--ISAGDAHTVAL 1092



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 171/379 (45%), Gaps = 29/379 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+   R  PV        +  A+    + T+ + +   ++A G N +GQ
Sbjct: 695  WGLNSSGQLGDGTTTQRLTPVQVHGLTDAT--AILTSSSQTVAMRQDRTLWAWGDNHWGQ 752

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P+++ GL  +V  ++ G +H +A   DG L+ WG NS GQLG G  + 
Sbjct: 753  LGDGTTT-RRLTPVQVQGLM-DVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSY 810

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +++P+  +V+ L+       A G   +VAV   G V +WG+  SG+LG G  +  L    
Sbjct: 811  RLLPV--QVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSL---- 864

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 TP  ++    + V   AAG  H A   ++G ++ +G  +  ++     ++   P 
Sbjct: 865  -----TPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV 919

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  L     +  GGYH       G L+TWG N  G LG G +     P +VQG  S + 
Sbjct: 920  QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMSVTA 979

Query: 343  VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +   + G+   AA  +G + TW            G +S GQLG G     + P  V    
Sbjct: 980  M--AAGGYHMAAAGQDGTLWTW------------GLNSYGQLGGGPLSQSLTPVQVQVQG 1025

Query: 403  NVKALQVSCGFNHTGALLE 421
                  ++ GF+HT A+ +
Sbjct: 1026 LTGVAAIAAGFSHTLAVRQ 1044



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 163/355 (45%), Gaps = 40/355 (11%)

Query: 65  CSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
            +AF   +   LA G G HTL + + G V+A G ND GQLG          P+++     
Sbjct: 66  ANAFAAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTT-RRFSPVQV---MT 121

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
               I+ G +H+ A + DG ++ WG+NS+GQLG G    +  P+  +V+ L+G+     A
Sbjct: 122 GATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPV--QVQGLTGV--TAVA 177

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S A+  GG V +WG    G+LG G          ST   TP  ++ L GV + I+
Sbjct: 178 AGRNHSAALGQGGTVWTWGDNLVGQLGDG---------TSTQRLTPVQVQGLTGV-IAIS 227

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTC 301
           A     +  + ++G V+ +G+ +  ++   +G    R  P  +  L     +  GG    
Sbjct: 228 ANDS-ETVALRQDGTVWAWGNNSSGQL--GDGTTTVRFTPVQVLGLTGVTAIAAGGGFAV 284

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            L   G L+ WGSN  G LG G+    + PE+VQG    + V  ++    HT A+ +   
Sbjct: 285 ALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQG---LTGVTAIAASGIHTVALRQDGT 341

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           L W W          G++S GQLG G       P  V     V A  ++ G+ +T
Sbjct: 342 L-WAW----------GNNSSGQLGDGTTTVRFTPVQVQGLTGVTA--IAAGYLYT 383



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 169/370 (45%), Gaps = 35/370 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ ++G+LG G+   R  PV         + A+A G  +T+   + G V+A G N   Q
Sbjct: 395 WGDNEWGQLGDGTTTRRLTPVQVQGLT--GVTAIAAGYLYTVASKQDGTVWAWGDNKRSQ 452

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +     P  + GL+  +  I+     + A+  DG ++ WG N+ GQLG G    
Sbjct: 453 LG-EGAVSQRHTPGEVQGLEG-ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTTTR 510

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V+ L+G+ T  AA  +   VAV   G V +WG G  G+LG G      G  R
Sbjct: 511 RLTPV--QVQGLAGV-TAVAASDYHL-VAVRQDGTVWAWGVGFWGQLGDG-----TGMDR 561

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST    P  ++ L GV     AAG  H+  + ++G V+ +G     ++          P 
Sbjct: 562 ST----PVQVQGLTGVTA--IAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPV 615

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +  +  +  GG HT  L   G ++TWG N  G LG G+    HSP +VQG    + 
Sbjct: 616 QVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQG---LAD 672

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++    HT A+  +G + TW            G +S GQLG G     + P  V+  
Sbjct: 673 VIAIATNNGHTVAVRQDGTVWTW------------GLNSSGQLGDGTTTQRLTPVQVHGL 720

Query: 402 ENVKALQVSC 411
            +  A+  S 
Sbjct: 721 TDATAILTSS 730



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 176/431 (40%), Gaps = 83/431 (19%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAF-----------EKHS------------------- 72
            WG   YG+LG G L  R  PV                + H+                   
Sbjct: 795  WGLNSYGQLGGGPLSYRLLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQ 854

Query: 73   ----------------------LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
                                  + A+A GG H     + G ++  GLN +GQLG    + 
Sbjct: 855  LGDGTTAQSLTPVQVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLG-GGPLS 913

Query: 111  YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            Y L P+++ GL  +V  ++ G +H +A   DG L+ WG NS GQLG G  + +++P+  +
Sbjct: 914  YRLLPVQVQGL-MDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPV--Q 970

Query: 171  VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
            V+ L  + T  AA G+  + A    G + +WG    G+LG G  S  L         TP 
Sbjct: 971  VQGLMSV-TAMAAGGYHMAAAGQ-DGTLWTWGLNSYGQLGGGPLSQSL---------TPV 1019

Query: 231  LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
             ++      V   AAGF H+  + ++G V+ +G  A  ++       +  P  +  L   
Sbjct: 1020 QVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLTGV 1079

Query: 291  EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
              +  G  HT  L   G ++ WG N  G LG G+     +P +VQG    + V  ++ G 
Sbjct: 1080 TAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQG---LTGVIAIAAGS 1136

Query: 351  KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
             HT A+ +   + W W          G +S GQLG G       P  V     V A  ++
Sbjct: 1137 LHTVALRQDGTV-WAW----------GRNSWGQLGDGTTTHRATPVQVQGLTGVIA--IA 1183

Query: 411  CGFNHTGALLE 421
             G  HT AL +
Sbjct: 1184 AGSLHTVALRQ 1194



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 157/365 (43%), Gaps = 33/365 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G++  R  P      E   + A+A     T+ + + G V+A G N  GQ
Sbjct: 445 WGDNKRSQLGEGAVSQRHTPGEVQGLE--GITAIAASNLLTVAVRQDGTVWAWGDNARGQ 502

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   V  ++   +H  A+  DG ++ WG    GQLG G    
Sbjct: 503 LGDGTTT-RRLTPVQVQGLAG-VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMD 560

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V+ L+G+     A G   +VA+   G V +WG    G+LG G  +  L    
Sbjct: 561 RSTPV--QVQGLTGV--TAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHL---- 612

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP  +  + G  V IAA G  H+  + ++G V+ +G     ++      H   P 
Sbjct: 613 -----TPVQVPGVTG-AVAIAAGGS-HTVALLQDGTVWTWGYNIWGQLGDGTTTHRHSPV 665

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +     HT  +   G ++TWG N +G LG G+     +P +V G    + 
Sbjct: 666 QVQGLADVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATA 725

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           +   S     T A+ + + L W WG +H           GQLG G     + P  V    
Sbjct: 726 ILTSSS---QTVAMRQDRTL-WAWGDNH----------WGQLGDGTTTRRLTPVQVQGLM 771

Query: 403 NVKAL 407
           +V A+
Sbjct: 772 DVTAM 776



 Score = 65.5 bits (158), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 4/137 (2%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            Q   A  WG   +G+LG G+   R  PV         + ALA G AHT+ + E G V+A 
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLT--GVSALAAGYAHTVVVGEDGTVWAW 1301

Query: 96   GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G N   QLG   +   S  P+++  L      ++ G  H+ A++ DG  + WG+N+ GQ+
Sbjct: 1302 GNNSGTQLGNGSSTDRS-TPVQVEALTG-AFSLAAGRFHTVAMSPDGAGWGWGRNNLGQV 1359

Query: 156  GLGKKAAKVIPIPTKVE 172
            G G  A +  P+   V+
Sbjct: 1360 GDGTTADRPTPVNVMVQ 1376



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 20/124 (16%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G HT  +   G ++ WG+N++G LG G+     SP +V      +    ++ G  HT A 
Sbjct: 82  GNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVM-----TGATAIAAGIYHTVAA 136

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           S +G + TW            G +S GQLG G  +    P  V     V A  V+ G NH
Sbjct: 137 SQDGTVWTW------------GRNSSGQLGDGTSIQRFSPVQVQGLTGVTA--VAAGRNH 182

Query: 416 TGAL 419
           + AL
Sbjct: 183 SAAL 186


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4111 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4169

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4170 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4222

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4223 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4278

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 4279 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 4337

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4338 VLQG----KNIRQISAGRCHSAA 4356



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4164

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4165 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4223

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4224 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4273

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4274 -RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4332

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4333 PTLVTVL 4339



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4172

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4173 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4224

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P++V
Sbjct: 4225 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQV 4284

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4285 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4331

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT+V    G+N++  Q+S G  H+ A
Sbjct: 4332 EPTLVTVLQGKNIR--QISAGRCHSAA 4356



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4136

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4137 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4195

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4196 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4245

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4246 GTQFSVAL 4253



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 166/320 (51%), Gaps = 22/320 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
           G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 266

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 267 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 325

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
            + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 326 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 378

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
               ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 379 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 434

Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 435 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 493

Query: 336 GPFSESPVDQVSCGWKHTAA 355
                  + Q+S G  H+AA
Sbjct: 494 V-LQGKNIRQISAGRCHSAA 512



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 261 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 320

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
           LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 321 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 379

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 380 TAKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 429

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 430 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 488

Query: 281 PSLISKL 287
           P+L++ L
Sbjct: 489 PTLVTVL 495



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 168/385 (43%), Gaps = 36/385 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 156 LWGAGRHGQLAEAG-RNVMVPATAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 212

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
           +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 213 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 271

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 272 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 328

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIFGDRAVDKMLFQEGN 276
                   +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 329 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 380

Query: 277 HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 381 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 440

Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
               +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 441 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 487

Query: 394 HPTIVNFGENVKALQVSCGFNHTGA 418
            PT+V   +     Q+S G  H+ A
Sbjct: 488 EPTLVTVLQGKNIRQISAGRCHSAA 512



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 128 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPATAPSFSQ- 183

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 184 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 233

Query: 238 VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
             V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 234 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 292

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
              CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 293 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 351

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 352 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 401

Query: 412 GFNHTGAL 419
           G   + AL
Sbjct: 402 GTQFSVAL 409


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 48/367 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H + +T+ G  ++ G    G+LG  +  NI    +P  I  L    ++ ++
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQ---QPKLIDALNTTNIELVA 366

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+T+ G+LY WGK   G LG G + +  +P       L GI     A G   +
Sbjct: 367 CGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNF-LLEGIHVSSIACGPYHT 425

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG + S+         + PR +  L+G++   AA G  H
Sbjct: 426 AVVTSAGQLFTFGDGTFGVLGHGDKKSV---------FIPREVDSLKGLRTVRAACGVWH 476

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     GN   +  P+ ++ L  P   +V
Sbjct: 477 TAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G   +S V++++CG  H 
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADG-KLPNRVEGKLHKSFVEEIACGAYHV 593

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G            S G+LGHG+  D   PT+V   ++ +   ++CG
Sbjct: 594 AVLTSRTEVYTWGKG------------SNGRLGHGDVDDRNSPTLVESLKDKQVKSIACG 641

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 642 TNFTAAV 648



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 161/334 (48%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +  +P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 332 WGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGV 391

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G K
Sbjct: 392 LGHGNEVSHWV-PKRVNFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDK 450

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G  GR
Sbjct: 451 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGR 508

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 509 LGHGNKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 555

Query: 269 KMLFQEGN-HA--RRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  Q GN HA  + P+ +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG 
Sbjct: 556 PVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGH 615

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G +D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 616 GDVDDRNSPTLVES-LKDKQVKSIACGTNFTAAV 648



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 119/271 (43%), Gaps = 42/271 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +V VT  G+  SWG    GRLGHG +S+I         
Sbjct: 298 LPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNI--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-----ARRP 281
             P+LI  L    +++ A G  HS  +  +G +Y +G    D  +   GN       +R 
Sbjct: 349 QQPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWG--KGDFGVLGHGNEVSHWVPKRV 406

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + + +  +   + CG YHT V+TS G+L+T+G    G LG G    +  P  V       
Sbjct: 407 NFLLEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLR 466

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHGN
Sbjct: 467 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGN 513

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 514 KEPKLVPTCVAALVEPNFCQVACGHSLTVAL 544



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ ++P LI  L 
Sbjct: 299 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG +H+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 359 TTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGN-EVSHWVPKRVNFLLEGIHVSS 417

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 418 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDKKSVFIPREVDSLKGL 465

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 466 RTVRAACGVWHTAAVVEVM 484


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 180/373 (48%), Gaps = 32/373 (8%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA-FEKHS-LKALACGGAHTLFLTETG 90
           S L++     WGN  +G LGLG +E     V C   F+K S ++ +ACG  +T+ +T  G
Sbjct: 42  SLLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDG 101

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
            +Y+ G ND+GQLG  +  G     L I GL   V  + + G +H+ A+   G+L+ WG 
Sbjct: 102 KIYSCGNNDYGQLGHEQ--GRKRLQL-ILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGS 158

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           NS GQLGL  K       P  V+ L      Q A G + ++A+T  G++ SWG+   G+L
Sbjct: 159 NSEGQLGLNSKNFMECS-PRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQL 217

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G +           E  P+LI  L GV +   A G  HS  I ++G ++ +G     +
Sbjct: 218 GLGVDIR--------CEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQ 269

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   +  +   P  +  L  ++     CG   +  LT  G ++T G+   G LG GS + 
Sbjct: 270 LGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNN 329

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
              P +V      S V Q+SCG +HT A+  S+G++  WG GG+            GQLG
Sbjct: 330 EILPRQVM-ELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGA------------GQLG 376

Query: 386 HGNDVDYIHPTIV 398
           + +      P +V
Sbjct: 377 NNSTRSTTTPQVV 389



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 136/298 (45%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HT+ + E G +++ G N  GQL
Sbjct: 107 GNNDYGQLG--HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQL 164

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    +VQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 165 GLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  P  +  L+G+     A G   S+A++  G +  WG    G+LG            
Sbjct: 225 CEMK-PKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLND--------- 274

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   KV  AA G   S  +  +G V+  G     ++     N+   P 
Sbjct: 275 TQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPR 334

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S     +P+ V+GP
Sbjct: 335 QVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVRGP 392



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 177/388 (45%), Gaps = 53/388 (13%)

Query: 56  LESRWRPVVCSAFEKHSL----------KALACGGAHTL--FLTETGCVYATGLNDFGQL 103
           +E   RP +C    K++L          + LAC     +   L +   ++  G    G+L
Sbjct: 1   MEKDERPSLCIHIRKYTLFRRNANWNKKRRLACEPVIEVQKSLLKKEDMFCWGNTRHGEL 60

Query: 104 G---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--L 157
           G   I + I   L P  +   K  E+ QI+ G +++  IT DG++Y  G N  GQLG   
Sbjct: 61  GLGGIEDEI--ILVPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGNNDYGQLGHEQ 118

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G+K  ++I        L     K+AA G   ++AV   G++ SWG+   G+LG   ++ +
Sbjct: 119 GRKRLQLIL------GLDAFVFKKAACGAYHTIAVNEWGQLFSWGSNSEGQLGLNSKNFM 172

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGN 276
                   E +PR++K L    +   A G  H+  +  NG +Y +G  +  ++ L  +  
Sbjct: 173 --------ECSPRMVKTLGTSIIVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIR 224

Query: 277 HARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
              +P LI+ L   P +  + CGGYH+  ++  G ++ WG N  G LG+      + P +
Sbjct: 225 CEMKPKLINTLAGVPIAF-IACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQ 283

Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           +Q     + V   +CG + +  ++ +G + T G G              GQLGHG++ + 
Sbjct: 284 LQT-LRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMY------------GQLGHGSNNNE 330

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALL 420
           I P  V         Q+SCG  HT AL+
Sbjct: 331 ILPRQVMELMGSTVTQISCGKRHTLALV 358


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 111/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4115

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4116 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4174

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4175 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4227

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4228 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4283

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 4284 -NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4342

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4343 VLQG----KNIRQISAGRCHSAA 4361



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4110 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4169

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4170 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4228

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4229 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4278

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4279 -RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4337

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4338 PTLITVL 4344



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4005 LWGAGRHGQLAEAG-RNVMIPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4061

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4062 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4120

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4121 GNSDRQRRP--RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4177

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4178 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4229

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4230 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4289

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4290 PV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4336

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT++    G+N++  Q+S G  H+ A
Sbjct: 4337 EPTLITVLQGKNIR--QISAGRCHSAA 4361



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3977 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 4032

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4033 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4082

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEV+
Sbjct: 4083 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4141

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4142 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4200

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4201 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4250

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4251 GTQFSVAL 4258



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 178/361 (49%), Gaps = 28/361 (7%)

Query: 43  WGNGDYGRLGLG-SLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LG G SL++    P  C+      +K +ACGG HTLFL E G VY+ G N  
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG S        P  ++ L +E +  I+ G  HS A+++ G LY WG  ++GQLG   
Sbjct: 64  GQLGHSHE---GTHPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLG-HA 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  IP  ++ LS    +Q + G +  +A+   G++ +WG    G+LG G      G
Sbjct: 120 TVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGN-----G 174

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F+   S+ +P+ +K LEG+ +    AG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 175 FI---SQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231

Query: 280 RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L   + V   CG  HT +LT  G L+T+G+  +G LG  S+    +P RV   
Sbjct: 232 TPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVL-E 290

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
              S V Q++CG KHT A             S GT    G    GQLG G++ +   PT+
Sbjct: 291 LMGSEVSQIACGRKHTLAFVP----------SSGTLYAFGCGDLGQLGTGHENNVKCPTV 340

Query: 398 V 398
           V
Sbjct: 341 V 341



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 14/283 (4%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P   +   +  +K +ACG +H+L L+  G +Y+ G  + GQLG +    YS  P  I  
Sbjct: 74  HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKK 133

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+L+ WG+N++GQLGLG         P KV+ L GI  
Sbjct: 134 LSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSS-PQKVKSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q   G   S A++  G V  WG   +G+LG   E           + TP  +K L   K
Sbjct: 193 AQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQV---------KETPCHVKPLRTHK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + + G ++ FG     ++     ++   P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            HT     S G LY +G  + G LG G  + +  P  V+G ++
Sbjct: 304 KHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVKGKWA 346



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 33/332 (9%)

Query: 96  GLNDFGQLGISENIGYSL-EPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQLG   ++  ++ EP   +  L   V +++ G  H+  +  DG++Y  G N  G
Sbjct: 5   GHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   +     P+ T    L+    K  A G   S+A++  G + SWGAG  G+LGH  
Sbjct: 65  QLGHSHEGTHPAPVAT----LAEEHIKHIACGQSHSLALSLQGNLYSWGAGNDGQLGH-- 118

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-- 271
            +++  + R      PR+IK+L   K++  + G  H   + ++G+++ +G     ++   
Sbjct: 119 -ATVEHYSR-----IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172

Query: 272 --FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             F   +  ++   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+    V  
Sbjct: 173 NGFISQSSPQKVKSLEGIPLAQ-VTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKE 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           +P  V+ P     V  +SCG +HTA +++ G + T+G GGS            GQLGH +
Sbjct: 232 TPCHVK-PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGS------------GQLGHDS 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             + I+P  V      +  Q++CG  HT A +
Sbjct: 279 LHNEINPRRVLELMGSEVSQIACGRKHTLAFV 310



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG ++ GQLG G      +  P           K+ A G + ++ +   G+V S G  G 
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E +            P  +  L    +K  A G  HS  +   G +Y +G   
Sbjct: 64  GQLGHSHEGT-----------HPAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGAGN 112

Query: 267 VDKMLFQEGNH-ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++      H +R P +I KL     +++ CG  H   L   G+L+TWG N +G LG+G
Sbjct: 113 DGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTHGQLGLG 172

Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           +  +   SP++V+      P+ QV+ G  H+ A+S  G +  W            G +S 
Sbjct: 173 NGFISQSSPQKVKS-LEGIPLAQVTAGGSHSFALSLSGAVFGW------------GKNSA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++     P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAIL 257



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 27/227 (11%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +L WG    G+LG+G          + SE  P          VK  A G  H+  + E+G
Sbjct: 1   MLCWGHSAFGQLGNGH-----SLKNAVSE--PCACTFSLATCVKEVACGGKHTLFLMEDG 53

Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           +VY  G     ++    EG H   P+ ++ L   + + + CG  H+  L+  G LY+WG+
Sbjct: 54  QVYSCGWNGEGQLGHSHEGTH---PAPVATLAEEHIKHIACGQSHSLALSLQGNLYSWGA 110

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
             +G LG  +++      R+    S+  + Q+SCG  H  A+  +G++ TW         
Sbjct: 111 GNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTW--------- 161

Query: 374 SEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G ++ GQLG GN  +    P  V   E +   QV+ G +H+ AL
Sbjct: 162 ---GQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL 205


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 179/367 (48%), Gaps = 40/367 (10%)

Query: 43  WGNGDYGRLGLGSLESRWR-----PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG   Y  LG   + S  R     P VC      S+K +ACGG H++FL E G VY  G+
Sbjct: 4   WG---YWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV 60

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG  E  G   +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLG
Sbjct: 61  NSKGQLG-HEREGN--KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG 117

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           L       + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E  
Sbjct: 118 L-MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP 176

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S+ +P+ ++ LEG+ +   AAG  HS  +  +G V+ +G     ++   +  
Sbjct: 177 --------SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK 228

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG GS++   +P R
Sbjct: 229 DRESPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRR 287

Query: 334 VQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           V      S V Q++CG +HT A   S G I  +G G              GQLG G+  +
Sbjct: 288 VL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCN 334

Query: 392 YIHPTIV 398
              P+ V
Sbjct: 335 VKCPSPV 341



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G NS GQLG 
Sbjct: 9   LGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+       V  +SCG +HTA +++ G + T+G G            S GQLGHG+  
Sbjct: 234 CHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHGSMN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT A +
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLAFV 310


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 168/323 (52%), Gaps = 28/323 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4040

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4041 GKLG-HGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4099

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 4100 TSNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 4152

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 4153 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4208

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  I  L     E++  G  HT  L S G++Y WGSN  G LG+G  + +  P  + 
Sbjct: 4209 -NRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLIT 4267

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      + Q+S G  H+AA
Sbjct: 4268 ILQG----KNIRQISAGRCHSAA 4286



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 128/247 (51%), Gaps = 14/247 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4035 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4094

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4095 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4153

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4154 TAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4203

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++     NH R 
Sbjct: 4204 -RARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVRE 4262

Query: 281  PSLISKL 287
            P+LI+ L
Sbjct: 4263 PTLITIL 4269



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 172/387 (44%), Gaps = 40/387 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3930 LWGAGRHGQLAEAG-RNVMIPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 3986

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3987 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4045

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4046 GNSDRQRRP--RQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4102

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4103 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4154

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  +  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4155 AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4214

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ ++ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4215 PV-LAGVVIEDIAVGAEHTLALASTGDVYAWG------------SNSEGQLGLGHTNHVR 4261

Query: 394  HPTIVNF--GENVKALQVSCGFNHTGA 418
             PT++    G+N++  Q+S G  H+ A
Sbjct: 4262 EPTLITILQGKNIR--QISAGRCHSAA 4286



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 140/308 (45%), Gaps = 32/308 (10%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + IP      S  
Sbjct: 3902 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMIPAAAPSFSQ- 3957

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3958 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4007

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEV+
Sbjct: 4008 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVI 4066

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4067 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4125

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 4126 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 4175

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4176 GTQFSVAL 4183



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGVAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 164/332 (49%), Gaps = 30/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG G+   +  P V  A   H +  +ACG  HT  +T+ G V   G  + GQ
Sbjct: 94  WGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQ 153

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    SL P  +S L  E + QI+ G  H+ A++V+GE+Y WG  ++GQLG+GK  
Sbjct: 154 LGQGDWTS-SLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQ 212

Query: 162 AKV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +   +  P KV        +  A G    +A+T   ++ SWG G  GRLG G       
Sbjct: 213 EETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGLGADGRLGLGD------ 266

Query: 220 FLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGD---------RAVDK 269
              S S ++P +++  +E +++   AAG  H+A + +NG ++  G           A  +
Sbjct: 267 ---SESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQLGHGDADPQ 323

Query: 270 MLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           +  ++    R   L+  +    +       CG  HT V+++ GE++ WG+ E+G LG G 
Sbjct: 324 LTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWGAAEDGQLGTGG 383

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            +  +SP  V+       V  VSCG  H+AA+
Sbjct: 384 TEGANSP--VELTSLRGLVGDVSCGLVHSAAV 413



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 187/414 (45%), Gaps = 54/414 (13%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRP------------VVCSAFEKHSLKA---LACGGAH 82
           +  +L G G++GRLG G   S+  P            +  +A    SL     +ACGG H
Sbjct: 22  KRTSLQGWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHH 81

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
           T+ +TE G V + G  + GQLG       ++  +  +     V  ++ GY+H++ +T  G
Sbjct: 82  TVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVG 141

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            +  WGK ++GQLG G   + +  +P  V  L     +Q A G   ++A++  G++ SWG
Sbjct: 142 LVMCWGKGNSGQLGQGDWTSSL--LPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSWG 199

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG  G+LG G+         +    TP+ ++  E  K +  A G  H   I ++ R++ +
Sbjct: 200 AGADGQLGVGKHQE-----ETADVATPQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSW 254

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGC 319
           G  A  ++   +      P+++ +   +     V  GG+HT VL+  GE++T G    G 
Sbjct: 255 GLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYGQ 314

Query: 320 LGIGSIDVLHSPERVQG-----------PFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           LG G  D   + ++ +               +  + + +CG  HT  IS  G++  WG  
Sbjct: 315 LGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTAGEVFAWG-- 372

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGAL 419
                 +ED     GQLG G       P  +    +++ L   VSCG  H+ A+
Sbjct: 373 -----AAED-----GQLGTGGTEGANSPVELT---SLRGLVGDVSCGLVHSAAV 413



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 58/227 (25%)

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
           GG +    G G  GRLGHG          + S+  P+ ++  +   V ++     H +  
Sbjct: 20  GGKRTSLQGWGEFGRLGHGD---------TLSQLEPKRLRFDKRFPVSLSFTALAHESL- 69

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             NG +Y                                V CGG+HT  +T  GE+ +WG
Sbjct: 70  --NGAIY--------------------------------VACGGHHTVAVTEDGEVVSWG 95

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
               G LG G+      P  V+   S   V  V+CG+ HTA +++ G ++ WG G S   
Sbjct: 96  WGNEGQLGSGNAFDQTVPAVVKA-LSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNS--- 151

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                    GQLG G+    + P  V+   N K  Q++CG  HT AL
Sbjct: 152 ---------GQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL 189



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 13/77 (16%)

Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           V+CG  HT A++E G++++WGWG              GQLG GN  D   P +V    N 
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNE------------GQLGSGNAFDQTVPAVVKALSNH 122

Query: 405 KALQVSCGFNHTGALLE 421
           +   V+CG+ HT  + +
Sbjct: 123 RVCGVACGYYHTAVVTD 139


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/319 (34%), Positives = 164/319 (51%), Gaps = 25/319 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4110

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            G+LG   +     +  R     +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG  
Sbjct: 4111 GKLGHGNS-----DRQRRPXQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNT 4165

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILG 219
            + K   +P +V  L G    Q A G   ++AV+  G ++ ++G G  G+LG G       
Sbjct: 4166 SNK--KLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN------ 4217

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHA 278
               ST++ +P+ I  L G+ +K  A G   S  + ++G VY FG DR +     +  NH 
Sbjct: 4218 ---STAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH- 4273

Query: 279  RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V G
Sbjct: 4274 NRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4333

Query: 337  PFSESPVDQVSCGWKHTAA 355
                  V Q+S G  H+AA
Sbjct: 4334 -LQGKNVRQISAGRCHSAA 4351



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 128/247 (51%), Gaps = 19/247 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP      +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4105 WGDGDYGKLGHGNSDRQRRPX-----QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4159

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKK 160
            LG+       L P R++ L+  ++ Q++ G +H+ A++ DG + + +G    G+LGLG  
Sbjct: 4160 LGLGNTSNKKL-PERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNS 4218

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             AK    P K++ L GI  K+ A G + SVA+T  G V ++G      L  G        
Sbjct: 4219 TAK--SSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG-------- 4268

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             R+ +   P+ I  L GV ++  A G  H+  +  NG VY +G  +  ++     NH R 
Sbjct: 4269 -RARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVRE 4327

Query: 281  PSLISKL 287
            P+L++ L
Sbjct: 4328 PTLVTGL 4334



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 115/215 (53%), Gaps = 22/215 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
            +GNGDYGRLGLG+  ++  P   +A E + +  +ACG  HTL ++  G  V+A G  D+G
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211

Query: 102  QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            +LG+  +   S  P +I      G+KK    ++ G   S A+T DG +Y +G++    +G
Sbjct: 4212 KLGLGNSTAKS-SPQKIDVLCGIGIKK----VACGTQFSVALTKDGHVYTFGQDR--LIG 4264

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            L +  A+    P ++  L+G+  +  A+G E ++A+   G V +WG+   G+LG G  + 
Sbjct: 4265 LPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNH 4324

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +           P L+  L+G  V+  +AG  HSA
Sbjct: 4325 V---------REPTLVTGLQGKNVRQISAGRCHSA 4350



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 168/387 (43%), Gaps = 45/387 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4000 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 4056

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4057 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P         G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4116 GNSDRQRRPX-------QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4167

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEGN 276
                    +  P  +  LEG ++   A G  H+  +  +G  V+ FGD    K+      
Sbjct: 4168 --------KKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4219

Query: 277  HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  I  L     ++V CG   +  LT  G +YT+G +    L  G     + P+++
Sbjct: 4220 AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQI 4279

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                +   ++ V+ G +HT A+ S G +  WG             +S GQLG G+     
Sbjct: 4280 PV-LAGVIIEDVAVGAEHTLALASNGDVYAWG------------SNSEGQLGLGHTNHVR 4326

Query: 394  HPTIVN--FGENVKALQVSCGFNHTGA 418
             PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4327 EPTLVTGLQGKNVR--QISAGRCHSAA 4351



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 138/308 (44%), Gaps = 37/308 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3972 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4027

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4028 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4077

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP         EEVV
Sbjct: 4078 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPX------QGEEVV 4131

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + QV+CG  
Sbjct: 4132 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLN 4190

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  ++    +   +V+C
Sbjct: 4191 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKIDVLCGIGIKKVAC 4240

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 4241 GTQFSVAL 4248



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 179/380 (47%), Gaps = 38/380 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LG G+      PV+       ++  ALA G +HT+ + + G V+A GLN  G
Sbjct: 481 WGFNAYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASG 540

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    I   + P++I GL   V  I+ G  H+ A   DG ++ WG NS GQLG G   
Sbjct: 541 QLGDGATIDRRI-PVQIPGLAG-VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTT 598

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  +V  L+G+     A G   SVA+   G V +WG    G+LG G  ++ L   
Sbjct: 599 HRLSPV--QVPGLTGV--SAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARL--- 651

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
                 TP  +  L GV     AAG LH+  + ++G V+ +G    D     +G   RR 
Sbjct: 652 ------TPVQVHGLTGVTA--VAAGSLHTVALRQDGTVWAWGYN--DLGQLGDGTTTRRL 701

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     +  G +HT  +   G ++ WG N  G LG GS     +P +VQ    
Sbjct: 702 APVQVQGLTDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ---E 758

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            + V  ++ G+ HT A+ +   + W WG          ++SG QLG+G+  D   P  V 
Sbjct: 759 LTGVSALAAGYAHTVAVKQDGTV-WAWG----------NNSGTQLGNGSSTDRYTPVWVE 807

Query: 400 FGENVKALQVSCGFNHTGAL 419
               V AL  + G  HT A+
Sbjct: 808 GLTGVSAL--TAGRFHTAAV 825



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 180/388 (46%), Gaps = 39/388 (10%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           Q   A  WGN  +G+LG G+   R  PV         + A+A G  HT  + + G V+A 
Sbjct: 24  QDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLT--GVTAVAAGRHHTFAVRQDGTVWAW 81

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLN +GQLG   +      P+++ GL   V  I+ G  H+ A++ DG ++ WG N  GQL
Sbjct: 82  GLNVWGQLGDGTHT-ERHTPVQVPGLTG-VTAIAAGRRHTFAVSQDGTVWAWGDNDWGQL 139

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G +A +  P+  ++  L+G+     A G   + AV   G V +WG    G+LG G   
Sbjct: 140 GDGTRADRHTPV--QLPELTGV--TAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTR- 194

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   T+  TP  +  L GV     AAG  H+  + ++G V+ +G+ A+ ++   +G
Sbjct: 195 --------TNRLTPVQVPGLTGVTA--IAAGDYHTLAVRQDGTVWAWGNNALGQL--GDG 242

Query: 276 NHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  R  P  +  L     +  G  HT  +   G ++ WG N  G LG G+     +P +
Sbjct: 243 TYTERLTPVQVPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQ 302

Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           V G    S V  ++ G +HT A+ +   + W W          G +  GQLG G   D +
Sbjct: 303 VPG---LSGVTAIAEGRRHTFAVRQDGTV-WAW----------GLNFWGQLGDGTRSDRL 348

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLE 421
            P  V    +V A  ++ G  HT A+ +
Sbjct: 349 TPVQVPDLTSVTA--IAAGDYHTLAVRQ 374



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 164/360 (45%), Gaps = 33/360 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + A+A G AHTL   + G V++ G N +GQ
Sbjct: 534 WGLNASGQLGDGATIDRRIPVQIPGLA--GVTAIAAGSAHTLAAGQDGAVWSWGANSYGQ 591

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P+++ GL   V  ++ G  HS A+  DG +  WG+NS GQLG G  AA
Sbjct: 592 LGDGTTT-HRLSPVQVPGLTG-VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAA 649

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+G+     A G   +VA+   G V +WG    G+LG G          
Sbjct: 650 RLTPV--QVHGLTGV--TAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGT--------- 696

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  ++ L    V   AAG+ H+  + ++G V+ +G     ++          P 
Sbjct: 697 TTRRLAPVQVQGL--TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPV 754

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            + +L     +  G  HT  +   G ++ WG+N    LG GS    ++P  V+G    + 
Sbjct: 755 QVQELTGVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEG---LTG 811

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           V  ++ G  HTAA+S  +   W W          G ++ GQ+G G   D   P  V   E
Sbjct: 812 VSALTAGRFHTAAVSP-EGFGWAW----------GRNNFGQVGDGTTADRPRPVDVVIQE 860



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 169/376 (44%), Gaps = 36/376 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+LG G+   R  PV         + A++ G +HT+ + + G V+A G N +GQ
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLT--GVTAISAGESHTVAVRQDGTVWAWGDNVWGQ 288

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   V  I+ G  H+ A+  DG ++ WG N  GQLG G ++ 
Sbjct: 289 LGDGTRTD-RLTPVQVPGLSG-VTAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSD 346

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +     A G   ++AV   G V +WG    G+LG G          
Sbjct: 347 RLTPV--QVPDLTSV--TAIAAGDYHTLAVRQDGTVWAWGDNVWGQLGDGTY-------- 394

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            T   TP  +  L GV     AAG  H+  + ++G V+ +GD    ++   +G +  R  
Sbjct: 395 -TDRLTPVQVPGLTGVTA--IAAGESHTVAMRQDGTVWAWGDNVWGQL--GDGTYTDRLT 449

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     +  G YHT  +   G +  WG N  G LG G+     SP  V G    
Sbjct: 450 PVQVPDLTSVTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGTSSRSPSPVMVPGLTGV 509

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           +    ++ G  HT A+ +   + W W          G ++ GQLG G  +D   P  +  
Sbjct: 510 TVFAALAAGDSHTVAVMQDGTV-WAW----------GLNASGQLGDGATIDRRIPVQIPG 558

Query: 401 GENVKALQVSCGFNHT 416
              V A  ++ G  HT
Sbjct: 559 LAGVTA--IAAGSAHT 572



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 160/351 (45%), Gaps = 37/351 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + A   G  HT+ + + G  +A G N +GQLG        L P+++ GL   V  ++ G 
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTD-RLTPVQVPGLTG-VTAVAAGR 66

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           HH+ A+  DG ++ WG N  GQLG G    +  P+  +V  L+G+     A G   + AV
Sbjct: 67  HHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPV--QVPGLTGV--TAIAAGRRHTFAV 122

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           +  G V +WG    G+LG G  +           +TP  + EL GV     AAG  H+  
Sbjct: 123 SQDGTVWAWGDNDWGQLGDGTRA---------DRHTPVQLPELTGVTA--IAAGRRHTFA 171

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           + ++G V+ +GD A  ++   +G    R  P  +  L     +  G YHT  +   G ++
Sbjct: 172 VRQDGTVWAWGDNAWGQL--GDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVW 229

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
            WG+N  G LG G+     +P +V G    + V  +S G  HT A+ +   + W W    
Sbjct: 230 AWGNNALGQLGDGTYTERLTPVQVPG---LTGVTAISAGESHTVAVRQDGTV-WAW---- 281

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G +  GQLG G   D + P  V     V A  ++ G  HT A+ +
Sbjct: 282 ------GDNVWGQLGDGTRTDRLTPVQVPGLSGVTA--IAEGRRHTFAVRQ 324



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 21/251 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ    + WG   +G+LG G+  +R  PV         + A+A G  HT+ L + G V+A
Sbjct: 626 LQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLT--GVTAVAAGSLHTVALRQDGTVWA 683

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G ND GQLG        L P+++ GL  +V  I+ GY H+ A+  DG ++ WG N  GQ
Sbjct: 684 WGYNDLGQLGDGTTT-RRLAPVQVQGLT-DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQ 741

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   A+  P+  +V+ L+G+     A G+  +VAV   G V +WG     +LG+G  
Sbjct: 742 LGDGSSTARSTPV--QVQELTGV--SALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGS- 796

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   ST  YTP  ++ L GV      AG  H+A +   G  + +G     ++   +
Sbjct: 797 --------STDRYTPVWVEGLTGVSALT--AGRFHTAAVSPEGFGWAWGRNNFGQV--GD 844

Query: 275 GNHARRPSLIS 285
           G  A RP  + 
Sbjct: 845 GTTADRPRPVD 855


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 178/382 (46%), Gaps = 40/382 (10%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   E    P      E   +  +A G  H+L L + G V+A G N +G
Sbjct: 133 WGYNSYGQLGLGEAGEIERIPKKIEGLE--DVIKVAAGSRHSLALKKDGTVWAWGYNYYG 190

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   NI  +  P+++ GL   V  I  G   S A+  DG ++ WG N  GQ+G G   
Sbjct: 191 QLGDESNIRRN-TPVQVKGLTG-VKDIDAGDFFSVALRDDGTVWGWGYNYKGQIGCGTGI 248

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P+ T    +S I   Q + G E  +A+     V  WGAG  G+LG+G  +S L   
Sbjct: 249 NSNVPLQTV--GVSNI--TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIP 304

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              S +T          +VK   AG + SA I E+G ++I+GD     ++    N    P
Sbjct: 305 EKLSSFT----------EVKSVKAGTMVSAAIKEDGTLWIWGDNTY-GIMGNSRNINSSP 353

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                +   + V    Y    L + G ++TWG N NG LG+G+      P  V G     
Sbjct: 354 VQRKDISGIKAVELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGT---G 410

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVN 399
            V+ +SCG  H A I S+G + TW            G++  GQLG+GN VDYI  P  +N
Sbjct: 411 DVEVISCGKTHMAIIKSDGTLWTW------------GYNIYGQLGNGN-VDYITEPVTIN 457

Query: 400 FGENVKALQVSCGFNHTGALLE 421
              N+   ++SCG  H  A+ E
Sbjct: 458 GISNIS--KISCGGKHVLAIDE 477



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 118/243 (48%), Gaps = 19/243 (7%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           VQ++ G +H+ A+  DG ++ WG NS GQLGLG +A ++  IP K+E L  +   + A G
Sbjct: 112 VQVACGEYHTIALKKDGTVWTWGYNSYGQLGLG-EAGEIERIPKKIEGLEDVI--KVAAG 168

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S+A+   G V +WG    G+L  G ES+I          TP  +K L GVK  I A 
Sbjct: 169 SRHSLALKKDGTVWAWGYNYYGQL--GDESNI-------RRNTPVQVKGLTGVK-DIDAG 218

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            F  S  + ++G V+ +G     ++    G ++  P     +    ++  G  H   L  
Sbjct: 219 DFF-SVALRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQISAGDEHVLALDK 277

Query: 306 GGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
              ++ WG+ + G LG G+    L  PE++   F+E  V  V  G   +AAI E   L W
Sbjct: 278 DKNVWGWGAGDKGQLGNGTAASFLRIPEKLS-SFTE--VKSVKAGTMVSAAIKEDGTL-W 333

Query: 365 GWG 367
            WG
Sbjct: 334 IWG 336



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 41/387 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+++    PV  +     ++  ++CGG H L + E   ++A G ND+ Q
Sbjct: 434 WGYNIYGQLGNGNVDYITEPVTINGIS--NISKISCGGKHVLAIDENKTLWAWGNNDYLQ 491

Query: 103 LGISENIGYSLE--------PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L   +++G S E        P  +   +K+V  I   ++ +  +  D E++++    N  
Sbjct: 492 L--IDDVGLSAESGSNDYCIPFAVKS-EKDVKDIVAAFNRTLVVYEDEEVWIYAA-KNTV 547

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            G      + + +P K+E L G+     ++G    +A+   G V S G    G+LG G +
Sbjct: 548 AG----DEQSVYLPYKIEGLEGV--TDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQ 601

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +       S SE T  L K      +   AAG  HS  +  +G V+ +G     ++    
Sbjct: 602 T----HHNSYSE-TFNLTKAKGLTNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHGN 656

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              +  P     L     +  G  +   L   G ++ WG N  G LG GS    + P +V
Sbjct: 657 DTFSLEPMQAEGLENICAISAGNNYNLALKEDGTVWAWGDNTYGQLGNGSTYKTNVPVQV 716

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            G   E+ V  ++      A   +G +  W W          G ++ GQLG G   + + 
Sbjct: 717 DGL--ENIVKIIAGRDSSFAITKDGDV--WAW----------GKNNCGQLGDGTTQNRLT 762

Query: 395 PTIVNFGENVKALQVSCGFNHTGALLE 421
           P  ++  +  K+  +  G + T  L+ 
Sbjct: 763 PVKIDAFKGCKS--IVSGMDFTMVLMN 787



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 17/191 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G L  G+      P+     E  ++ A++ G  + L L E G V+A G N +GQ
Sbjct: 644 WGSNQFGELAHGNDTFSLEPMQAEGLE--NICAISAGNNYNLALKEDGTVWAWGDNTYGQ 701

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+++ GL+  +V+I  G   S AIT DG+++ WGKN+ GQLG G    
Sbjct: 702 LGNGSTYKTNV-PVQVDGLEN-IVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQN 759

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  K++   G   K    G + ++ +   G V+  G+  SG +        LGF  
Sbjct: 760 RLTPV--KIDAFKG--CKSIVSGMDFTMVLMNDGTVIGVGSNVSGVM-------TLGF-- 806

Query: 223 STSEYTPRLIK 233
           S   + P  +K
Sbjct: 807 SDRSFIPIEVK 817



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 175/435 (40%), Gaps = 87/435 (20%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG GD G+LG G+  S  R P   S+F +  +K++  G   +  + E G ++  G N +G
Sbjct: 284 WGAGDKGQLGNGTAASFLRIPEKLSSFTE--VKSVKAGTMVSAAIKEDGTLWIWGDNTYG 341

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +G S NI  S ++   ISG+K     +    + ++A+  DG ++ WGKN NG LGLG  
Sbjct: 342 IMGNSRNINSSPVQRKDISGIK----AVELNQYCAAALKNDGTVWTWGKNINGILGLGTA 397

Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-- 217
               IP       +SG    +  + G      +   G + +WG    G+LG+G    I  
Sbjct: 398 LDSQIP-----SVVSGTGDVEVISCGKTHMAIIKSDGTLWTWGYNIYGQLGNGNVDYITE 452

Query: 218 ---------------------------------------------LGFLRSTSEY-TPRL 231
                                                        L     +++Y  P  
Sbjct: 453 PVTINGISNISKISCGGKHVLAIDENKTLWAWGNNDYLQLIDDVGLSAESGSNDYCIPFA 512

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K  + VK  +AA  F  +  + E+  V+I+   A    +  +      P  I  L    
Sbjct: 513 VKSEKDVKDIVAA--FNRTLVVYEDEEVWIY---AAKNTVAGDEQSVYLPYKIEGLEGVT 567

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP----VDQVS 347
           +V  G  H   L   G +Y+ G++  G LG GS    H+        +++     +  V+
Sbjct: 568 DVSVGKNHILALKDDGYVYSAGNSYWGQLGDGS-QTHHNSYSETFNLTKAKGLTNIVAVA 626

Query: 348 CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
            G +H+ A+ ++G + TWG             +  G+L HGND   + P      EN+ A
Sbjct: 627 AGSEHSVALKNDGTVWTWG------------SNQFGELAHGNDTFSLEPMQAEGLENICA 674

Query: 407 LQVSCGFNHTGALLE 421
             +S G N+  AL E
Sbjct: 675 --ISAGNNYNLALKE 687



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 12/134 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS      PV     E  ++  +  G   +  +T+ G V+A G N+ GQ
Sbjct: 694 WGDNTYGQLGNGSTYKTNVPVQVDGLE--NIVKIIAGRDSSFAITKDGDVWAWGKNNCGQ 751

Query: 103 LG--ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG   ++N    L P++I   K  K +V   +G   +  +  DG +   G N +G + LG
Sbjct: 752 LGDGTTQN---RLTPVKIDAFKGCKSIV---SGMDFTMVLMNDGTVIGVGSNVSGVMTLG 805

Query: 159 KKAAKVIPIPTKVE 172
                 IPI  K++
Sbjct: 806 FSDRSFIPIEVKIK 819


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 192/402 (47%), Gaps = 47/402 (11%)

Query: 34  TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
            L +    +WG+ +YG+ G    E    P +        S+  ++CG  ++  +T +G +
Sbjct: 4   NLSKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
              G    GQLG   N+   L P R++   K VVQ++    H++AI  +GELY WG + N
Sbjct: 64  ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKN 121

Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           G+LG G+     +  V+  P KV+ L G    Q + G   +  +T   K L+WG G  GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG    I         +TP+LI+ L G+ +K  + G  H+A +   G++Y+FG  A  
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG--- 321
           K+ F   +    P L+   P  +    +V  G  H+  +T  G++YTWG  + G LG   
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLGHIF 289

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
            G      SP+R+     ++ +  +SCG  H+ A+S+ G I TWG   +           
Sbjct: 290 NGPEHDFLSPKRLSN-LEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN----------- 337

Query: 381 GGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGAL 419
              +GHG  +  IHP + +     +N   +QV C  +H+ AL
Sbjct: 338 ---IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 31/330 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G  G+LG G+LE    P V  + +  ++  +AC   HT  +   G +Y  G +  G
Sbjct: 65  LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVVQVACSDRHTAAILSNGELYTWGCSKNG 122

Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +LG       IS N+    +P+++  L+ E V+Q+S G +H+  +T D +   WG    G
Sbjct: 123 KLGHGQFELSISNNVVS--QPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    + I  P  +E L+G+  K+ + G   +  +   GK+  +G G  G+LG G 
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              +L          PRL++  LE +++   + G  HSA + + G+VY +G       +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289

Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
               H    P  +S L   +  ++ CG  H+  L+  G++YTWG  +N   GI  I   H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346

Query: 330 SPERVQGPFSESP-VDQVSCGWKHTAAISE 358
                + P  ++  + QV C   H+ A+S+
Sbjct: 347 PNMPSKHPILQNKNIVQVVCSSSHSIALSD 376



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 21/200 (10%)

Query: 229 PRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           P L+  L  +  +   + G  +SA I  +G + ++G     ++ F        P +   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG------SIDVLHSPERVQGPFSES 341
               +V C   HT  + S GELYTWG ++NG LG G      S +V+  P +V+    E 
Sbjct: 92  KNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEK 151

Query: 342 PVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V QVSCG  HT  +++ K  LTWG G              G+LGHG+  D   P ++  
Sbjct: 152 -VIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTPKLIES 198

Query: 401 GENVKALQVSCGFNHTGALL 420
              +   ++SCG +HT  LL
Sbjct: 199 LAGLPIKEISCGGHHTAILL 218



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 22/137 (16%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CG  ++  +T+ G+L  WG    G LG G+++    P RV    S   V QV+C  +
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVN--LSLKNVVQVACSDR 102

Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--- 407
           HTAAI S G++ TWG             S  G+LGHG     I   +V+    VKAL   
Sbjct: 103 HTAAILSNGELYTWGC------------SKNGKLGHGQFELSISNNVVSQPMKVKALEGE 150

Query: 408 ---QVSCGFNHTGALLE 421
              QVSCG  HTG L +
Sbjct: 151 KVIQVSCGSYHTGCLTD 167


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 185/388 (47%), Gaps = 51/388 (13%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  +  N+
Sbjct: 327 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 386

Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + +  +P  
Sbjct: 387 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 443

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                + GI     A G   +  VT  G++ ++G G  G LGHG   S+         + 
Sbjct: 444 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 493

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
           PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK     G+
Sbjct: 494 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSRLGHGD 551

Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D    P 
Sbjct: 552 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 610

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           RV G   +S V++++CG  H A + S  ++ TWG G            S G+LGHG+  D
Sbjct: 611 RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDADD 658

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
              PT+V   ++ +   ++CG N T A+
Sbjct: 659 RNSPTLVESLKDKQVKSIACGSNFTAAV 686



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 370 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 429

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 430 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 488

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 489 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 546

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 547 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 593

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 594 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            LG G  D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 650 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 686



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 50/304 (16%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 303 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 362

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 363 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 413

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 414 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 471

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    +  P  V        V + +CG  HTAA+ E          
Sbjct: 472 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 530

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GK+ TWG          DG  S  +LGHG+    + PT V         QV+CG + 
Sbjct: 531 CSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFCQVACGHSL 578

Query: 416 TGAL 419
           T AL
Sbjct: 579 TVAL 582



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 337 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 396

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 397 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 455

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 456 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPREVDSLKGL 503

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 504 RTVRAACGVWHTAAVVEVM 522


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 153/298 (51%), Gaps = 17/298 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G  +++ +P +  AF   +++ ++CG  HT  L E G V+  G  +FGQ
Sbjct: 11  WGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQ 70

Query: 103 LGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   ++  ++  P  +S L+ K V Q++ G+HH+ A+  +G+LY WG    G+LG G +
Sbjct: 71  LGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDE 130

Query: 161 AAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    P  VE L G   T  AA GF  SV +  GG +L+WG G  G+LGHG E     
Sbjct: 131 VRQ--ASPKLVESLQGKEVTFVAAGGFHSSVIIE-GGNLLTWGGGYFGQLGHGDE----- 182

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T   TP+++K ++       A G  H+  + ++  V+ +G     K+   +     
Sbjct: 183 ----TDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            P +I+ L       +  GG+H+  LTS G LYTWG  + G LG G  +  + P  V+
Sbjct: 239 EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVE 296



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 151/310 (48%), Gaps = 25/310 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           VY+ G    GQLG  +        L ++ L   V Q+S G  H++ +  +GE++ +G+ +
Sbjct: 8   VYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGN 67

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G      +  P  V  L G   KQ A G+  + A+   G++ +WG+G  GRLGH
Sbjct: 68  FGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGH 127

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G E           + +P+L++ L+G +V   AAG  HS+ I E G +  +G     ++ 
Sbjct: 128 GDE---------VRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             +    + P ++  +    + EV CG +HT +LT   E++TWGS E G LGIG  +   
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHA 238

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P  +        V  +S G  H+AA+ SEG + TWG G              GQLGHG+
Sbjct: 239 EPIMIT-ALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDK------------GQLGHGD 285

Query: 389 DVDYIHPTIV 398
           +     P +V
Sbjct: 286 ENSQNIPVVV 295



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 117/233 (50%), Gaps = 29/233 (12%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           G +V SWG G  G+LGHG E +         +  PRL+    G  V+  + G  H+A + 
Sbjct: 5   GSEVYSWGQGVLGQLGHGDEKT---------QRQPRLVVAFLGFNVRQVSCGNQHTAILM 55

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKL--PYSEEVVCGGYHTCVLTSGGEL 309
           ENG V+ FG R     L Q  +   +   P+L+S L   + ++V CG +HTC L   G+L
Sbjct: 56  ENGEVFTFG-RGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQL 114

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGG 368
           YTWGS E G LG G      SP+ V+       V  V+ G  H++ I EG  +LTWG   
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWG--- 170

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             G F        GQLGHG++ D   P +V   +   A +V+CG +HT  L +
Sbjct: 171 -GGYF--------GQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQ 214



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E+Y WG+   GQLG G +  K    P  V    G   +Q + G + +  +   G+V ++G
Sbjct: 7   EVYSWGQGVLGQLGHGDE--KTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFG 64

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LG G  +S+     + +  TP L+  L+G  VK  A G+ H+  + +NG++Y +
Sbjct: 65  RGNFGQLGQG--ASV-----TANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTW 117

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G     ++   +      P L+  L   E   V  GG+H+ V+  GG L TWG    G L
Sbjct: 118 GSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL 177

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
           G G      +P+ V+G   +    +V+CG  HT  +++ + + W WG   G F       
Sbjct: 178 GHGDETDRKTPKMVKG-VQQCIAHEVACGTHHTLMLTQSQEV-WTWGS--GEF------- 226

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G+LG G++  +  P ++   + V  + +S G  H+ AL
Sbjct: 227 -GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAAL 264



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 76/130 (58%), Gaps = 2/130 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LG G    R  P +    ++     +ACG  HTL LT++  V+  G  +FG+
Sbjct: 169 WGGGYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGK 228

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI +   ++ EP+ I+ L+   V+ ISTG  HS+A+T +G LY WG    GQLG G + 
Sbjct: 229 LGIGDEEKHA-EPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDEN 287

Query: 162 AKVIPIPTKV 171
           ++ IP+  +V
Sbjct: 288 SQNIPVVVEV 297



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 16/171 (9%)

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLI-SKLPYS-EEVVCGGYHTCVLTSGGELYTW 312
           E   VY +G   + ++   +    R+P L+ + L ++  +V CG  HT +L   GE++T+
Sbjct: 4   EGSEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTF 63

Query: 313 GSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSH 370
           G    G LG G S+    S   +        V QV+CGW HT A I  G++ TWG G   
Sbjct: 64  GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSG--- 120

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                      G+LGHG++V    P +V   +  +   V+ G  H+  ++E
Sbjct: 121 ---------EYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE 162


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 185/388 (47%), Gaps = 51/388 (13%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  +  N+
Sbjct: 293 SLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNV 352

Query: 110 GYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + +  +P  
Sbjct: 353 QH---PKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKR 409

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
                + GI     A G   +  VT  G++ ++G G  G LGHG   S+         + 
Sbjct: 410 VNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV---------FI 459

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGN 276
           PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK     G+
Sbjct: 460 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD--GDKSRLGHGD 517

Query: 277 HARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
              +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D    P 
Sbjct: 518 KEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPT 576

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           RV G   +S V++++CG  H A + S  ++ TWG G            S G+LGHG+  D
Sbjct: 577 RVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGHGDADD 624

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
              PT+V   ++ +   ++CG N T A+
Sbjct: 625 RNSPTLVESLKDKQVKSIACGSNFTAAV 652



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 336 WGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 395

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 396 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 454

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 455 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 512

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 513 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 559

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 560 PVYGQLGN----PHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            LG G  D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 616 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 652



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 50/304 (16%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 269 GDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVLVT 328

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 329 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALNTTNIELVACGEYHSCAV 379

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 380 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 437

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    +  P  V        V + +CG  HTAA+ E          
Sbjct: 438 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 496

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GK+ TWG          DG  S  +LGHG+    + PT V         QV+CG + 
Sbjct: 497 CSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFCQVACGHSL 544

Query: 416 TGAL 419
           T AL
Sbjct: 545 TVAL 548



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 303 PKALESTIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 363 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 421

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 422 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPREVDSLKGL 469

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 470 RTVRAACGVWHTAAVVEVM 488


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 189/393 (48%), Gaps = 52/393 (13%)

Query: 50  RLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG-- 104
           R+G  SLE +   ++  A E      ++ +ACGG H + +T+ G  ++ G    G+LG  
Sbjct: 284 RVG-SSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHG 342

Query: 105 ISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           +  N+ +   P  I  L    ++ ++ G +HS A+T+ G+LY WGK   G LG G + + 
Sbjct: 343 VDSNVQH---PKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSH 399

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P       + GI     A G   +  VT  G++ ++G G  G LGHG   S+      
Sbjct: 400 WVPKRVNF-LMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSV------ 452

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKML 271
              + PR +  L+G++   AA G  H+A + E            +G+++ +GD   DK  
Sbjct: 453 ---FIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKSR 507

Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              G+   +  P+ ++ L  P   +V CG   T  LT+ G +YT GS   G LG    D 
Sbjct: 508 LGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADG 567

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              P RV+G   +S V++++CG  H A + S  ++ TWG G            S G+LGH
Sbjct: 568 -KVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKG------------SNGRLGH 614

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G+  D   PT+V   ++ +   ++CG N T A+
Sbjct: 615 GDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 154/338 (45%), Gaps = 45/338 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G   +   P +  A    +++ +ACG  H+  +T +G +Y  G  DFG 
Sbjct: 331 WGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGI 390

Query: 103 LGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG    + + + P R++ L +   V  I+ G +H++ +T  G+L+ +G  + G LG G +
Sbjct: 391 LGHGNEVSHWV-PKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDR 449

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGSGR 208
             K + IP +V+ L G+ T +AA G   + AV               GK+ +WG G   R
Sbjct: 450 --KSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSR 507

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG +   L          P  +  L        A G   +  +  +G VY  G     
Sbjct: 508 LGHGDKEPKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS---- 554

Query: 269 KMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   NG
Sbjct: 555 PVYGQLGN----PHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            LG G  D  +SP  V+    +  V  ++CG   TAA+
Sbjct: 611 RLGHGDADDRNSPTLVES-LKDKQVKSIACGSNFTAAV 647



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 50/304 (16%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+          N ++G   +      +P  +E    +  +  A G + +V VT
Sbjct: 264 GDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYIACGGQHAVLVT 323

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+  SWG    GRLGHG +S++           P+LI  L    +++ A G  HS  +
Sbjct: 324 KQGESFSWGEESEGRLGHGVDSNV---------QHPKLIDALSTTNIELVACGEYHSCAV 374

Query: 254 DENGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G    D  +   GN       +R + + +  +   + CG YHT V+TS G+
Sbjct: 375 TLSGDLYTWG--KGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ 432

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    +  P  V        V + +CG  HTAA+ E          
Sbjct: 433 LFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTV-RAACGVWHTAAVVEVMVGSSSSSN 491

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GK+ TWG          DG  S  +LGHG+    + PT V         QV+CG + 
Sbjct: 492 CSSGKLFTWG----------DGDKS--RLGHGDKEPKLVPTCVAALVEPNFCQVACGHSL 539

Query: 416 TGAL 419
           T AL
Sbjct: 540 TVAL 543



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 17/199 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+  + + G  + +G+ +  ++     ++ + P LI  L 
Sbjct: 298 PKALESTIVLDVQYIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALS 357

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            +  E V CG YH+C +T  G+LYTWG  + G LG G+ +V H  P+RV        V  
Sbjct: 358 TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGN-EVSHWVPKRVNFLMEGIHVSS 416

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V+  + +
Sbjct: 417 IACGPYHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSVFIPREVDSLKGL 464

Query: 405 KALQVSCGFNHTGALLEYV 423
           + ++ +CG  HT A++E +
Sbjct: 465 RTVRAACGVWHTAAVVEVM 483


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 130/381 (34%), Positives = 170/381 (44%), Gaps = 36/381 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R  PV  S      + A+A GGAHT  LT +G V   G N FGQ
Sbjct: 84  WGYNWSGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGGVMCWGGNYFGQ 142

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG N +GQLG G    
Sbjct: 143 LGDGSYTDRS-TPVAVSGLPSGVTAIAAGGAHTCALMSSGGVWCWGYNLSGQLGDGSTIY 201

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+   V  L    T  AA G+  + A+TG G V  WG  G G+LG G          
Sbjct: 202 HITPV--AVSGLPSEVTAIAA-GYAHTCALTGSGGVWCWGDNGFGQLGDGSF-------- 250

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            T   TP  +  L      IAA G  ++  +  +G V+ +G    D     +G+   R  
Sbjct: 251 -TDSSTPAAVGGLPSGVTAIAAGG-RYTCALTSSGGVWCWGRN--DSGQLGDGSFTNRST 306

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +  LP     +  GG HTC LTS G ++ WG N++G LG GS     +P  V G   
Sbjct: 307 PGAVGGLPSGVTAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSG--L 364

Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S V  ++ G  HT A  S G +  WG     G F        GQLG G   D   P  V
Sbjct: 365 PSGVTAIAAGGAHTCARTSSGGVWCWG-----GNFY-------GQLGDGTTTDRSTPGAV 412

Query: 399 NFGENVKALQVSCGFNHTGAL 419
           + G       ++ G  HT AL
Sbjct: 413 S-GLPSGVTAIAAGNYHTCAL 432



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 171/387 (44%), Gaps = 44/387 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG GS   R  PV  S      + A+A GGAHT  L  +G V+  G N  GQ
Sbjct: 135 WGGNYFGQLGDGSYTDRSTPVAVSGLPS-GVTAIAAGGAHTCALMSSGGVWCWGYNLSGQ 193

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I Y + P+ +SGL  EV  I+ GY H+ A+T  G ++ WG N  GQLG G    
Sbjct: 194 LGDGSTI-YHITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTD 252

Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P     +P+ V  +        A G   + A+T  G V  WG   SG+LG G     
Sbjct: 253 SSTPAAVGGLPSGVTAI--------AAGGRYTCALTSSGGVWCWGRNDSGQLGDGSF--- 301

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T+  TP  +  L      IAA G  H+  +  +G V+ +G    D     +G++
Sbjct: 302 ------TNRSTPGAVGGLPSGVTAIAAGG-AHTCALTSSGGVWCWGGN--DSGQLGDGSY 352

Query: 278 ARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             R  P  +S LP     +  GG HTC  TS G ++ WG N  G LG G+     +P  V
Sbjct: 353 TDRSTPGAVSGLPSGVTAIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAV 412

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            G    S V  ++ G  HT A++ G    W W          G +  GQLG G   +   
Sbjct: 413 SG--LPSGVTAIAAGNYHTCALT-GSDGVWCW----------GDNFYGQLGDGTTTNRST 459

Query: 395 PTIVNFGENVKALQVSCGFNHTGALLE 421
           P  V+ G       ++ G  HT AL  
Sbjct: 460 PGAVS-GLPSGVTAIAAGNYHTCALTS 485



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/383 (30%), Positives = 167/383 (43%), Gaps = 40/383 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  P   S      + A+A G  HT  LT +  V+  G N +GQ
Sbjct: 390 WGGNFYGQLGDGTTTDRSTPGAVSGLPS-GVTAIAAGNYHTCALTGSDGVWCWGDNFYGQ 448

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G ++ WG+N +GQLG G    
Sbjct: 449 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTN 507

Query: 163 KVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           +  P     +P+ V  +        A G   + A+   G V  WG    G+LG G     
Sbjct: 508 RSTPGAVGGLPSGVTAI--------AAGDYHTCALMSSGGVWCWGLNNRGQLGDGSY--- 556

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T   TP  +  L    + I AAG  H+  +  +  V+ +G  +  ++      +
Sbjct: 557 ------TDSSTPVAVGGLPSGVMAI-AAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609

Query: 278 ARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
              P  +S LP     +  G YHTC LTS G ++ WG N +G LG G+     +P  V G
Sbjct: 610 RSTPVAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRSTPGAVSG 669

Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               S V  ++ G +HT A++ G    W WG ++           GQLG G   +   P 
Sbjct: 670 --LPSGVTAIAAGDEHTCALT-GSGGVWCWGDNY----------YGQLGDGTTTNRSTPG 716

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
            V+ G       ++ G  HT AL
Sbjct: 717 AVS-GLPSGVTAIAAGVYHTCAL 738



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 135/293 (46%), Gaps = 16/293 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+  +R  P          + A+A G  HT  L  +G V+  GLN+ GQ
Sbjct: 492 WGRNDSGQLGDGTTTNRSTPGAVGGLPS-GVTAIAAGDYHTCALMSSGGVWCWGLNNRGQ 550

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ + GL   V+ I+ G +H+ A+T    ++ WG NS+GQLG G    
Sbjct: 551 LGDGSYTDSS-TPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTN 609

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+T  G V  WG   SG+LG G          
Sbjct: 610 RSTPV--AVSGLPSGVTAIAA-GNYHTCALTSSGGVWCWGYNLSGQLGDGT--------- 657

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   AAG  H+  +  +G V+ +GD    ++      +   P 
Sbjct: 658 TTNRSTPGAVSGLP-SGVTAIAAGDEHTCALTGSGGVWCWGDNYYGQLGDGTTTNRSTPG 716

Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            +S LP     +  G YHTC LT  G +  WG+N +G LG G      +P  V
Sbjct: 717 AVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTPVDV 769



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A G  HT  LT +G V+  G N  GQLG       S  P+ +SGL   
Sbjct: 54  SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRS-TPVAVSGLPSG 112

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  I+ G  H+ A+T  G +  WG N  GQLG G    +  P+   V  L    T  AA 
Sbjct: 113 VTAIAAGGAHTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPV--AVSGLPSGVTAIAA- 169

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   + A+   G V  WG   SG+LG G  S+I          TP  +  L   +V   A
Sbjct: 170 GGAHTCALMSSGGVWCWGYNLSGQLGDG--STIY-------HITPVAVSGLP-SEVTAIA 219

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
           AG+ H+  +  +G V+ +GD    ++       +  P+ +  LP     +  GG +TC L
Sbjct: 220 AGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVTAIAAGGRYTCAL 279

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
           TS G ++ WG N++G LG GS     +P  V G    S V  ++ G  HT A+ S G + 
Sbjct: 280 TSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGG--LPSGVTAIAAGGAHTCALTSSGGV- 336

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            W WGG+            GQLG G+  D   P  V+
Sbjct: 337 -WCWGGND----------SGQLGDGSYTDRSTPGAVS 362



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 131/312 (41%), Gaps = 36/312 (11%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           S  PL      + V  I+ G  H+ A+T  GE++ WG N +GQLG G    +  P+   V
Sbjct: 55  SFSPL------QGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPV--AV 106

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L    T  AA G   + A+T  G V+ WG    G+LG G           T   TP  
Sbjct: 107 SGLPSGVTAIAA-GGAHTCALTSSGGVMCWGGNYFGQLGDGSY---------TDRSTPVA 156

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +  L      IAA G  H+  +  +G V+ +G     ++      +   P  +S LP   
Sbjct: 157 VSGLPSGVTAIAAGG-AHTCALMSSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEV 215

Query: 292 EVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             +  GY HTC LT  G ++ WG N  G LG GS     +P  V G    S V  ++ G 
Sbjct: 216 TAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGG--LPSGVTAIAAGG 273

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           ++T A+ S G +  W            G +  GQLG G+  +   P  V  G       +
Sbjct: 274 RYTCALTSSGGVWCW------------GRNDSGQLGDGSFTNRSTPGAVG-GLPSGVTAI 320

Query: 410 SCGFNHTGALLE 421
           + G  HT AL  
Sbjct: 321 AAGGAHTCALTS 332



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 66/136 (48%), Gaps = 2/136 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  P   S      + A+A G  HT  LT +G V+  G N +GQ
Sbjct: 645 WGYNLSGQLGDGTTTNRSTPGAVSGLPS-GVTAIAAGDEHTCALTGSGGVWCWGDNYYGQ 703

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  +SGL   V  I+ G +H+ A+T  G +  WG N +GQLG G+   
Sbjct: 704 LGDGTTTNRS-TPGAVSGLPSGVTAIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLY 762

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 763 RTTPVDVVTSASWGVY 778



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 64/141 (45%), Gaps = 16/141 (11%)

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           S  S L     +  G +HTC LT  GE++ WG N +G LG GS     +P  V G    S
Sbjct: 54  SSFSPLQGVTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSG--LPS 111

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  ++ G  HT A+ S G ++ WG     G +        GQLG G+  D   P  V+ 
Sbjct: 112 GVTAIAAGGAHTCALTSSGGVMCWG-----GNYF-------GQLGDGSYTDRSTPVAVS- 158

Query: 401 GENVKALQVSCGFNHTGALLE 421
           G       ++ G  HT AL+ 
Sbjct: 159 GLPSGVTAIAAGGAHTCALMS 179


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 153/329 (46%), Gaps = 35/329 (10%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL----- 118

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
                   S   PRLI++L    +   + G  H   +  +G+ + +G  +  ++     F
Sbjct: 119 ---MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEF 175

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP 
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            V+       V  +SCG +HTA +++ G + T+G G            S GQLGH +  D
Sbjct: 235 HVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSMND 281

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGALL 420
            ++P  V      +  Q++CG  HT A +
Sbjct: 282 EVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 29/281 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G
Sbjct: 61  NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           G+G       SP+RV+      P+ QV+ G  H+ A+S  G +  WG             
Sbjct: 170 GLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------ 216

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 34/348 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           +ACG  HT+ +TE G ++  G N++GQLGI  N   + +P  +  LK E +  ++ G  H
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRN-KPTTVKALKPEKITHVAAGRFH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + A+T   +LY +G+ S G LG G +    + +PT +E L        A G   S A+T 
Sbjct: 99  TLAVTDSNKLYSFGQGSEGALGHGDETD--LNMPTSIESLEDKDVNIIACGGYHSAAITK 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++  WG+   G+LG          L++ +   P ++ +L G  V   A G+ H+A + 
Sbjct: 157 NGELYIWGSNSEGQLG----------LKNDTISYPTML-DL-GKSVISVACGYYHTAVVT 204

Query: 255 ENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
            +G++Y FG+    K+     E +   +P ++  +     +V CGG HT  LT+ G++YT
Sbjct: 205 ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALTASGQVYT 264

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
           +GS +NG LG+GS  +  +  ++    S+  +  ++CG  HTA +S+ G++ T+G  G H
Sbjct: 265 FGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFG-DGRH 323

Query: 371 GTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNHT 416
                      G+LG G++   +   P  V   +    L ++CG  HT
Sbjct: 324 -----------GKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHT 360



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 165/317 (52%), Gaps = 21/317 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +GN ++G+LG+GS ++R +P    A +   +  +A G  HTL +T++  +Y+ G    G 
Sbjct: 59  FGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGSEGA 118

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    ++ P  I  L+ K+V  I+ G +HS+AIT +GELY+WG NS GQLGL    
Sbjct: 119 LGHGDETDLNM-PTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGL---K 174

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              I  PT ++    + +   A G+  +  VT  GK+ ++G    G+LG       LG +
Sbjct: 175 NDTISYPTMLDLGKSVIS--VACGYYHTAVVTADGKLYTFGETEGGKLG-------LGDI 225

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
            +     P+++K + G  VK+A  G  H+  +  +G+VY FG     ++ L  +   +  
Sbjct: 226 EAHKVTKPKVVKGISGKVVKVACGGN-HTVALTASGQVYTFGSGQNGQLGLGSKIMDSNI 284

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 336
           P L+  L     + + CG  HT V++  GEL+T+G   +G LG G  S   L  P +VQ 
Sbjct: 285 PKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQ- 343

Query: 337 PFSESPVDQVSCGWKHT 353
              E  V  ++CG  HT
Sbjct: 344 RLKEFIVLHIACGGCHT 360



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 163/338 (48%), Gaps = 40/338 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG V+  G + FG    ++    S           +V  I+ G  H+  +T +G L+
Sbjct: 8   IPETGAVFTFGKSRFGDNRTNKFWIRS----------DKVTDIACGDEHTVVVTENGRLF 57

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G N  GQLG+G  + K    PT V+ L        A G   ++AVT   K+ S+G G 
Sbjct: 58  TFGNNEWGQLGIG--SNKTRNKPTTVKALKPEKITHVAAGRFHTLAVTDSNKLYSFGQGS 115

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G LGHG E+ +           P  I+ LE   V I A G  HSA I +NG +YI+G  
Sbjct: 116 EGALGHGDETDL---------NMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSN 166

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           + +  L  + +    P+++        V CG YHT V+T+ G+LYT+G  E G LG+G I
Sbjct: 167 S-EGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDI 225

Query: 326 DV--LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
           +   +  P+ V+G   +  V +V+CG  HT A++  G++ T+G G              G
Sbjct: 226 EAHKVTKPKVVKGISGK--VVKVACGGNHTVALTASGQVYTFGSG------------QNG 271

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG G+ + D   P +V      K   ++CG +HT  +
Sbjct: 272 QLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV 309



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 38/299 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G  G LG G       P    + E   +  +ACGG H+  +T+ G +Y  G N  GQ
Sbjct: 111 FGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQ 170

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ ++ I Y   P  +  L K V+ ++ GY+H++ +T DG+LY +G+   G+LGLG   
Sbjct: 171 LGLKNDTISY---PTMLD-LGKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIE 226

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A  +  P  V+ +SG   K  A G   +VA+T  G+V ++G+G +G+LG G  S I+   
Sbjct: 227 AHKVTKPKVVKGISGKVVK-VACGGNHTVALTASGQVYTFGSGQNGQLGLG--SKIM--- 280

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-- 279
                  P+L++ L   K+K  A G  H+A + + G ++ FGD          G H +  
Sbjct: 281 ---DSNIPKLVEALSKRKIKHIACGESHTAVVSDKGELFTFGD----------GRHGKLG 327

Query: 280 ----------RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                     +P  + +L       + CGG HT V  +  +    G ++N       +D
Sbjct: 328 QGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKIDKLANGDDDNESSSNDEVD 386


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 181/382 (47%), Gaps = 39/382 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS+  + R V         + ++A G AH+L L     V+  G N+ GQ
Sbjct: 72  WGGNGSGQLGTGSVSFQ-RVVAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQ 130

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   N+     P ++ GL  +VV ++ G  HS A+  DG ++ WG N  GQLG G   +
Sbjct: 131 VGDGTNVDRP-TPQKVPGLS-DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGH--S 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L+G+    A  GF+ S+AV   G V +WGA GSG+LG G     L    
Sbjct: 187 QPGPSPAQVVGLTGVVALAA--GFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRL---- 240

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  + +L+GV      AG  H+  +  +G V+ +G  +  +M   +G    RPS
Sbjct: 241 -----APTQVSQLQGVSA--VTAGLYHALALRSDGTVWAWGSNSSGQM--GDGTWTDRPS 291

Query: 283 --LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
              ++ +  ++ V      + VL   G ++ WG N  G LGIG+      P RV+G    
Sbjct: 292 PVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRG---L 348

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             V  ++ G +H   + ++G + TW            GH + GQLGHG+    + P +V 
Sbjct: 349 GAVTSLAAGTQHAVVLRADGTLWTW------------GHGATGQLGHGSSERMLSPEVVT 396

Query: 400 FGENVKALQVSCGFNHTGALLE 421
              NV ++  S  F+   AL +
Sbjct: 397 RLSNVASV-ASGSFHSVAALSD 417



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 171/378 (45%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G   S+  P          + ALA G   +L +   G V+A G N  GQ
Sbjct: 173 WGSNFYGQLGRG--HSQPGPSPAQVVGLTGVVALAAGFDFSLAVRSDGTVWAWGANGSGQ 230

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   L P ++S L+  V  ++ G +H+ A+  DG ++ WG NS+GQ+G G    
Sbjct: 231 LGDGTYI-QRLAPTQVSQLQG-VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD 288

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P+ V+  S    K  A     S+ +   G V +WG    G+LG G          
Sbjct: 289 R----PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIG---------- 334

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+  +P  ++      V   AAG  H+  +  +G ++ +G  A  ++          P 
Sbjct: 335 -TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPE 393

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++++L     V  G +H+    S G ++TWG N NG LG G+    H P RV G    S 
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPG---LSG 450

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  VS    H+ A+ S+G +  WGW          G ++ GQ+G G   D   P  V   
Sbjct: 451 VVSVSASGHHSFALRSDGTV--WGW----------GRNAQGQMGDGTTKDRASPARVEGL 498

Query: 402 ENVKALQVSCGFNHTGAL 419
            +VKAL  + G +H  AL
Sbjct: 499 SSVKAL--ASGGSHMVAL 514



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 162/373 (43%), Gaps = 35/373 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P   S  +   + A+  G  H L L   G V+A G N  GQ
Sbjct: 223 WGANGSGQLGDGTYIQRLAPTQVSQLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQ 280

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G          P++++ + +    ++     S  +  DG ++ WG NS GQLG+G  A 
Sbjct: 281 MGDGTWTDRP-SPVQVTSIARAKA-VAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTAD 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +V  L G  T  AA G + +V +   G + +WG G +G+LGHG    +L    
Sbjct: 339 S--PLPVRVRGL-GAVTSLAA-GTQHAVVLRADGTLWTWGHGATGQLGHGSSERML---- 390

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P ++  L    V   A+G  HS     +G V+ +G     ++          P 
Sbjct: 391 -----SPEVVTRLS--NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV 443

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V   G+H+  L S G ++ WG N  G +G G+     SP RV+G    S 
Sbjct: 444 RVPGLSGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG---LSS 500

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++ G  H  A+ ++G + TWG+ G+            GQLG G   D   P  V   
Sbjct: 501 VKALASGGSHMVALRTDGTVWTWGYNGA------------GQLGDGTTTDRRAPVQVTGL 548

Query: 402 ENVKALQVSCGFN 414
             V ++     F+
Sbjct: 549 SGVTSVAAGAYFS 561



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 178/428 (41%), Gaps = 92/428 (21%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
            WG   +G++G G+   R+RPV         L A+  + G  H+L L       + G +++
Sbjct: 1023 WGANAFGQVGDGTHFWRFRPVRVEGL----LNAVETSAGEQHSLALLGDERALSWGSHEY 1078

Query: 101  GQLGISENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQLG +E+ G SLEP+ +    S +    V +S  + H++A+  DG +  WG N++GQLG
Sbjct: 1079 GQLGDAES-GPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLG 1137

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G   ++  PI   V  L  +     A     ++A+   G V +WG    G+LG G    
Sbjct: 1138 DGTTESRATPI--TVAGLGAMVAVAPAA--RHTLALRSDGTVWAWGDNTFGQLGDGS--- 1190

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------- 263
                  +T    P  +  LE  KV   AAG  HS  + E+G V+ +G             
Sbjct: 1191 ------NTRRTLPVQVVGLE--KVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMD 1242

Query: 264  DRAV-------------------------DKMLFQEGNHAR------------RPSLISK 286
             RAV                         D  L+  GN++              P  + +
Sbjct: 1243 ARAVPTRMLGLDGAVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVE 1302

Query: 287  LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
            L     V  GGYH+  L   G ++TWG N  G LG G++     P  V G    + +  V
Sbjct: 1303 LDQVRTVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPG---LTAIASV 1359

Query: 347  SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
              G  HT A+      TW W          G +S GQLG G+  D + PT+V     VK+
Sbjct: 1360 GAGTSHTFAVGS---ETWAW----------GRNSHGQLGTGDSSDRLEPTLVKGLHGVKS 1406

Query: 407  LQVSCGFN 414
            +     F+
Sbjct: 1407 VLAGGDFS 1414



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 117/389 (30%), Positives = 170/389 (43%), Gaps = 50/389 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLND 99
            WG    G+LG G+L  R      S  E   L  +A G    AH L +++ G V+A G N 
Sbjct: 873  WGANGSGQLGDGTLGDR-----ASPLEVKGLAGIATGVMGEAHALVVSQDGTVWAWGANG 927

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
             GQLG       S  P+R++GL    + +S G  +S A+  DG ++ WG N +GQLG G 
Sbjct: 928  RGQLGDGTTT-SSASPVRVAGLSA-AMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDGT 985

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              A+  P P  V+ L+ +  K    G    VAV   G V  WGA   G++G G       
Sbjct: 986  NVARTTPKP--VQDLADV--KAVTAGAHHVVAVRHDGTVWGWGANAFGQVGDGTH----- 1036

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            F R        L+  +E       +AG  HS  +  + R   +G     ++   E   + 
Sbjct: 1037 FWRFRPVRVEGLLNAVE------TSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSL 1090

Query: 280  RPSLISKLPYSEEVVCG------GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             P  + KLP S+ +V          H   L + G + TWG N +G LG G+ +   +P  
Sbjct: 1091 EPVGV-KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPIT 1149

Query: 334  VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V G  +   V   +   +HT A+ S+G +  WG      TF        GQLG G++   
Sbjct: 1150 VAGLGAMVAVAPAA---RHTLALRSDGTVWAWG----DNTF--------GQLGDGSNTRR 1194

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGALLE 421
              P  V   E V A  ++ G  H+ A+ E
Sbjct: 1195 TLPVQVVGLEKVTA--IAAGSYHSLAVRE 1221



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 163/382 (42%), Gaps = 36/382 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  D G+LG G+  +R  P          +KA+  G  H + +   G V+  G N FGQ
Sbjct: 973  WGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAVRHDGTVWGWGANAFGQ 1030

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +G   +  +   P+R+ GL    V+ S G  HS A+  D     WG +  GQLG  +   
Sbjct: 1031 VGDGTHF-WRFRPVRVEGLLN-AVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGP 1088

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             + P+  K+     +    +   + Q + A+   G V +WG    G+LG G         
Sbjct: 1089 SLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGT-------- 1140

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             + S  TP  +  L G  V +A A   H+  +  +G V+ +GD    ++   +G++ RR 
Sbjct: 1141 -TESRATPITVAGL-GAMVAVAPAAR-HTLALRSDGTVWAWGDNTFGQL--GDGSNTRRT 1195

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P  +  L     +  G YH+  +   G ++ WG N  G LG G++D    P R+ G   
Sbjct: 1196 LPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLDG 1255

Query: 340  ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
                  V+ G  H+  +              GT    G++S GQLG G   + + P  V 
Sbjct: 1256 AV---AVAGGEYHSLMLR-----------FDGTLWATGNNSHGQLGEGTFTNRLSPFQVV 1301

Query: 400  FGENVKALQVSCGFNHTGALLE 421
              + V+   V  G  H+ AL E
Sbjct: 1302 ELDQVRT--VRAGGYHSVALRE 1321



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 131/281 (46%), Gaps = 21/281 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  +G+LG GS   R  PV     EK  + A+A G  H+L + E G V+A G N FGQ
Sbjct: 1178 WGDNTFGQLGDGSNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQ 1235

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    +     P R+ GL   V  ++ G +HS  +  DG L+  G NS+GQLG G    
Sbjct: 1236 LG-DGTMDARAVPTRMLGLDGAVA-VAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTN 1293

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++ P   +V  L  + T +A  G   SVA+   G V +WG  G G+LG G          
Sbjct: 1294 RLSPF--QVVELDQVRTVRA--GGYHSVALREDGTVWTWGHNGQGQLGDGTV-------- 1341

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             T+   P  +  L      IA+ G   S         + +G  +  ++   + +    P+
Sbjct: 1342 -TTRRVPAPVPGL----TAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLEPT 1396

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            L+  L   + V+ GG  +    + G   +WG+N +G LGIG
Sbjct: 1397 LVKGLHGVKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIG 1437



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 138/343 (40%), Gaps = 67/343 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G G+   R  PV  ++  +   KA+A   A +L L + G V+A GLN  GQ
Sbjct: 273 WGSNSSGQMGDGTWTDRPSPVQVTSIAR--AKAVAAQDAGSLVLLDDGGVFAWGLNSQGQ 330

Query: 103 LGISENIGYSLEPLRISGLK---------------------------------------- 122
           LGI       L P+R+ GL                                         
Sbjct: 331 LGIGTTADSPL-PVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERM 389

Query: 123 ---------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
                      V  +++G  HS A   DG ++ WG+N+NGQLG G    + +P+  +V  
Sbjct: 390 LSPEVVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPV--RVPG 447

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           LSG+ +  A+     S A+   G V  WG    G++G G          +    +P  ++
Sbjct: 448 LSGVVSVSAS--GHHSFALRSDGTVWGWGRNAQGQMGDGT---------TKDRASPARVE 496

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L    VK  A+G  H   +  +G V+ +G     ++        R P  ++ L     V
Sbjct: 497 GLS--SVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSGVTSV 554

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             G Y +  L + G ++ WG    G LG G+     SP +V G
Sbjct: 555 AAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTG 597



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 172/384 (44%), Gaps = 47/384 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G GS   R+R V    +    + ++  G  H++ L + G + A G N +GQ
Sbjct: 623 WGDNTEGQMGDGSWSDRFRAV--QVYGLTGVSSVVGGLYHSMALAQDGTLRAWGGNAYGQ 680

Query: 103 LG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G   ++  +     P  +SG+K     +   Y H  A+  DG L  WG N  GQLGLG 
Sbjct: 681 FGDGGVTPRVVAGAVP-GLSGIKL----LGASYLHVLAVREDGMLLTWGYNRFGQLGLG- 734

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            AA    +P +V  L     ++ + G   S+ V   G VL+WG   SG+LG G       
Sbjct: 735 -AAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGS------ 785

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T   +P L + L     + A+AG  HS  +  +G V+ +G  +  ++   +G    
Sbjct: 786 ---TTHRASPVLARNLP--CARAASAGRQHSLVLACDGTVWSWGGNSQGQL--GDGGVTS 838

Query: 280 R--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R  P+ +  L     V+ GG  + VL + G ++TWG+N +G LG G++    SP  V+G 
Sbjct: 839 RAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKG- 897

Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
              + +     G  H   +S +G +  WG  G             GQLG G       P 
Sbjct: 898 --LAGIATGVMGEAHALVVSQDGTVWAWGANGR------------GQLGDGTTTSSASP- 942

Query: 397 IVNFGENVKALQVSCGFNHTGALL 420
            V       A+ VS G  ++ A+L
Sbjct: 943 -VRVAGLSAAMNVSVGQAYSLAVL 965



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 156/356 (43%), Gaps = 39/356 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G  G+LG G+   R  PV  +   +  +  LA G AH L + + G V+A G N  GQ
Sbjct: 573 WGDGFEGQLGDGAGVQRASPVQVTGLTR--VVKLAAGAAHGLAVRDDGTVWAWGDNTEGQ 630

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   +       +++ GL   V  +  G +HS A+  DG L  WG N+ GQ G G    
Sbjct: 631 MG-DGSWSDRFRAVQVYGLTG-VSSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTP 688

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSILGF 220
           +V+     V  LSGI  K     +   +AV   G +L+WG    G+LG G    SS+   
Sbjct: 689 RVVA--GAVPGLSGI--KLLGASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL--- 741

Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   P  ++ L +G ++   +AG  HS  +  +G V  +G     ++      H  
Sbjct: 742 --------PVQVRGLGQGRRL---SAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRA 790

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P L   LP +     G  H+ VL   G +++WG N  G LG G +     P +V+G + 
Sbjct: 791 SPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWG 850

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              V  ++ G       ++G + TWG  GS            GQLG G   D   P
Sbjct: 851 VVAV--LAGGDSSMVLRADGTVWTWGANGS------------GQLGDGTLGDRASP 892



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 119/258 (46%), Gaps = 35/258 (13%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P   + + L+   +K AA G + S+ VT  G V +WG  GSG+LG G  S    F R  +
Sbjct: 38  PPAARSQALASATSKVAA-GAQHSLYVTQAGTVWAWGGNGSGQLGTGSVS----FQRVVA 92

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
           +  P L        V   AAG  HS  +  +  V+ +G     ++   +G +  RP+   
Sbjct: 93  QQVPGL------TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQV--GDGTNVDRPT-PQ 143

Query: 286 KLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           K+P   +VV    G +H+  L + G ++ WGSN  G LG G      SP +V G    + 
Sbjct: 144 KVPGLSDVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVG---LTG 200

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++ G+  + A+ S+G +  WG  GS            GQLG G  +  + PT V+  
Sbjct: 201 VVALAAGFDFSLAVRSDGTVWAWGANGS------------GQLGDGTYIQRLAPTQVSQL 248

Query: 402 ENVKALQVSCGFNHTGAL 419
           + V A  V+ G  H  AL
Sbjct: 249 QGVSA--VTAGLYHALAL 264



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDFG 101
            WG+   G+LG G++ +R  P         ++ ++  G +HT  + +ET   +A G N  G
Sbjct: 1328 WGHNGQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTSHTFAVGSET---WAWGRNSHG 1382

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG  ++    LEP  + GL   V  +  G   S A   DG    WG N +G LG+G   
Sbjct: 1383 QLGTGDS-SDRLEPTLVKGLHG-VKSVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPG 1440

Query: 162  AKVIP 166
             + +P
Sbjct: 1441 QRTVP 1445


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/333 (34%), Positives = 170/333 (51%), Gaps = 38/333 (11%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4113

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4114 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4172

Query: 160  KAAKVIPIPTKVECLSG----------IFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGR 208
             + K   +P +V  L G          +F  Q A G   ++AV+  G ++ ++G G  G+
Sbjct: 4173 TSNK--KLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGK 4230

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAV 267
            LG G          ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +
Sbjct: 4231 LGLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLI 4281

Query: 268  DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                 +  NH  RP  I  L     E+V  G  HT  L S G++Y WGSN  G LG+G  
Sbjct: 4282 GLPEGRARNH-NRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4340

Query: 326  DVLHSPERV---QGPFSESPVDQVSCGWKHTAA 355
            + +  P  V   QG      V Q+S G  H+AA
Sbjct: 4341 NHVREPTLVTVLQG----KNVRQISAGRCHSAA 4369



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 24/257 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4108 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4167

Query: 103  LGISENIGYSLEPLRISGLKKEVV-----------QISTGYHHSSAITVDGEL-YMWGKN 150
            LG+       L P R++ L+   +           Q++ G +H+ A++ DG + + +G  
Sbjct: 4168 LGLGNTSNKKL-PERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDG 4226

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              G+LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L 
Sbjct: 4227 DYGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 4284

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             G         R+ +   P+ I  L GV ++  A G  H+  +   G VY +G  +  ++
Sbjct: 4285 EG---------RARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQL 4335

Query: 271  LFQEGNHARRPSLISKL 287
                 NH R P+L++ L
Sbjct: 4336 GLGHTNHVREPTLVTVL 4352



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 162/346 (46%), Gaps = 39/346 (11%)

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           T  ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ 
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVIST 418

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVL 199
           DG +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V 
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGR 258
           SWG G  G+LGHG          S+++  P+LI+  L+G  V   +AG+ HSA + E+G 
Sbjct: 479 SWGDGDYGKLGHGN---------SSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 529

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNEN 317
           +Y +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +N
Sbjct: 530 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDN 589

Query: 318 GCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           G LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  
Sbjct: 590 GKLGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCG 645

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           S +  +             + P ++      + + +S G +H  AL
Sbjct: 646 SSEATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 678



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 173/397 (43%), Gaps = 50/397 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 4003 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4059

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4060 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4118

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4119 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4175

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA----------AAGFLHSACIDENGR-VYIFGDRA 266
                    +  P  +  LEG ++  A          A G  H+  +  +G  V+ FGD  
Sbjct: 4176 --------KKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSMVWAFGDGD 4227

Query: 267  VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              K+          P  +  L     ++V CG   +  LT  G +YT+G +    L  G 
Sbjct: 4228 YGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGR 4287

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                + P+++    +   ++ V+ G +HT A+ S G +  WG             +S GQ
Sbjct: 4288 ARNHNRPQQIPV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQ 4334

Query: 384  LGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
            LG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4335 LGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4369



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 141/317 (44%), Gaps = 40/317 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3975 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4030

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4031 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4080

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4081 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4139

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---------QGPFSESP 342
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV         Q   +   
Sbjct: 4140 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLF 4199

Query: 343  VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
              QV+CG  HT A+S    + W +G        DG    G+LG GN      P  V+   
Sbjct: 4200 FLQVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLC 4249

Query: 403  NVKALQVSCGFNHTGAL 419
             +   +V+CG   + AL
Sbjct: 4250 GIGIKKVACGTQFSVAL 4266



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score = 68.2 bits (165), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 366 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 485 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/345 (31%), Positives = 170/345 (49%), Gaps = 32/345 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE--------FPSQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             S G I  +G G              GQLG G+  +   P+ V 
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPVK 342



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+       V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 29/281 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G
Sbjct: 61  NTKGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G L
Sbjct: 110 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           G+G       SP+RV+      P+ QV+ G  H+ A+S  G +  WG             
Sbjct: 170 GLGKEFPSQASPQRVR-SLEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------ 216

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 192/402 (47%), Gaps = 47/402 (11%)

Query: 34  TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCV 92
            L +    +WG+ +YG+ G    E    P +        S+  ++CG  ++  +T +G +
Sbjct: 4   NLSKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAITNSGDL 63

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
              G    GQLG   N+   L P R++   K V+Q++    H++AI  +GELY WG + N
Sbjct: 64  ILWGYGGCGQLGFG-NLEDCLVP-RVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKN 121

Query: 153 GQLGLGK----KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           G+LG G+     +  V+  P KV+ L G    Q + G   +  +T   K L+WG G  GR
Sbjct: 122 GKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGR 181

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG    I         +TP+LI+ L G+ +K  + G  H+A +   G++Y+FG  A  
Sbjct: 182 LGHGDTQDI---------FTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFG 232

Query: 269 KMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG--- 321
           K+ F   +    P L+   P  +    +V  G  H+  +T  G++YTWG  + G LG   
Sbjct: 233 KLGFGSTDDVLIPRLLEG-PLEDIQITKVSLGSQHSAAVTKCGKVYTWG--QGGRLGHIF 289

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
            G      SP+R+     ++ +  +SCG  H+ A+S+ G I TWG   +           
Sbjct: 290 NGPEHDFLSPKRLSN-LEKAFIVDISCGNSHSVALSDVGDIYTWGMTKN----------- 337

Query: 381 GGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGAL 419
              +GHG  +  IHP + +     +N   +QV C  +H+ AL
Sbjct: 338 ---IGHG--IQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 159/330 (48%), Gaps = 31/330 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG G  G+LG G+LE    P V  + +  ++  +AC   HT  +   G +Y  G +  G
Sbjct: 65  LWGYGGCGQLGFGNLEDCLVPRVNLSLK--NVIQVACSDRHTAAILSNGELYTWGCSKNG 122

Query: 102 QLG-------ISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +LG       IS N+    +P+++  L+ E V+Q+S G +H+  +T D +   WG    G
Sbjct: 123 KLGHGQFELSISNNVVS--QPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQG 180

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    + I  P  +E L+G+  K+ + G   +  +   GK+  +G G  G+LG G 
Sbjct: 181 RLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGS 238

Query: 214 ESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              +L          PRL++  LE +++   + G  HSA + + G+VY +G       +F
Sbjct: 239 TDDVL---------IPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQGGRLGHIF 289

Query: 273 QEGNHA-RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
               H    P  +S L   +  ++ CG  H+  L+  G++YTWG  +N   GI  I   H
Sbjct: 290 NGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGI---H 346

Query: 330 SPERVQGPFSESP-VDQVSCGWKHTAAISE 358
                + P  ++  + QV C   H+ A+S+
Sbjct: 347 PNMPSKHPILQNKNIVQVVCSSSHSIALSD 376



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 93/200 (46%), Gaps = 21/200 (10%)

Query: 229 PRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           P L+  L  +  +   + G  +SA I  +G + ++G     ++ F        P +   L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG------SIDVLHSPERVQGPFSES 341
               +V C   HT  + S GELYTWG ++NG LG G      S +V+  P +V+    E 
Sbjct: 92  KNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEK 151

Query: 342 PVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V QVSCG  HT  +++ K  LTWG G              G+LGHG+  D   P ++  
Sbjct: 152 -VIQVSCGSYHTGCLTDDKKALTWGLGLQ------------GRLGHGDTQDIFTPKLIES 198

Query: 401 GENVKALQVSCGFNHTGALL 420
              +   ++SCG +HT  LL
Sbjct: 199 LAGLPIKEISCGGHHTAILL 218



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 22/137 (16%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CG  ++  +T+ G+L  WG    G LG G+++    P RV    S   V QV+C  +
Sbjct: 46  KVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVP-RVN--LSLKNVIQVACSDR 102

Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--- 407
           HTAAI S G++ TWG             S  G+LGHG     I   +V+    VKAL   
Sbjct: 103 HTAAILSNGELYTWGC------------SKNGKLGHGQFELSISNNVVSQPMKVKALEGE 150

Query: 408 ---QVSCGFNHTGALLE 421
              QVSCG  HTG L +
Sbjct: 151 KVIQVSCGSYHTGCLTD 167


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 182/385 (47%), Gaps = 44/385 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+ G GS ++   PV  +A        +A G AH L +   G V+A G N FGQ
Sbjct: 356 WGNNIEGQRGDGSAKTSTAPVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQ 413

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +     P++++GL   V  ++ G  HS  + +DG ++ WG+N++GQLG G  A 
Sbjct: 414 LGDGTRM-QRTAPVQVTGLSGGVA-VAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQ 471

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  LSG+     A G   S+AV+  G V +WG+  SG+LG G   + L    
Sbjct: 472 R--PAPVQVTELSGVVA--VAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARL---- 523

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARR 280
                TP  +  L GV     AAG+ HS  +  +G V+ +G+ +     FQ  +G + +R
Sbjct: 524 -----TPVQVAGLSGVVA--VAAGYFHSLAVRSDGTVWAWGNNS----FFQLGDGTNTQR 572

Query: 281 PS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P+   +  L        G +H+ VL S G ++ WG+N  G LG G+ +   SP +V G  
Sbjct: 573 PTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTANASFSPVQVTGL- 631

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
               V   +  ++  A  S+G +  W            G +  GQLG G     + P  V
Sbjct: 632 -SGGVAVAAGDFQSLAVRSDGTVRAW------------GDNIYGQLGDGTVTTRLAPVGV 678

Query: 399 NFGENVKALQVSCGFN---HTGALL 420
           N      A+    GF+   H+G +L
Sbjct: 679 NGLSGGMAVAAGNGFSLAVHSGGML 703



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 165/365 (45%), Gaps = 49/365 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+   R RPV  +   +   +A+A G  H+L +   G V+A G N  GQ
Sbjct: 106 WGHNGSGELGDGTTFRRTRPVQVTGLSE--AEAVAAGDGHSLVVRSDGTVWAWGWNSDGQ 163

Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG     G + E   P++++GL    V+++ G  HS A+ +DG ++ WG+N +GQLG G 
Sbjct: 164 LG----DGTTRERHVPVQVAGLSGG-VKVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT 218

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P+  +V  LSG+     A G   S+AV   G V +WG    G+LG G  S+ L 
Sbjct: 219 TVQRSAPV--QVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSARL- 273

Query: 220 FLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   TP  +  L  GV V   AAG  HS  +  +G V+ +G     ++       +
Sbjct: 274 --------TPVQVTGLSGGVAV---AAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTAS 322

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---Q 335
             P     L   E V  G  H+ V  S G ++ WG+N  G  G GS     +P +V    
Sbjct: 323 LTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALS 382

Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           G F+      V+ G  H  A+ S+G +  WG       F        GQLG G  +    
Sbjct: 383 GGFT------VAAGKAHALAVRSDGTVWAWG----QNLF--------GQLGDGTRMQRTA 424

Query: 395 PTIVN 399
           P  V 
Sbjct: 425 PVQVT 429



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 169/376 (44%), Gaps = 39/376 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  +      +K +A G  H+L +   G V+A G ND GQ
Sbjct: 156 WGWNSDGQLGDGTTRERHVPVQVAGLSG-GVK-VAAGDGHSLAVCLDGTVWAWGRNDSGQ 213

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  P++++GL   VV ++ G  HS A+  DG ++ WG+NS+GQLG G  +A
Sbjct: 214 LGDGTTVQRS-APVQVAGLSG-VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  LSG      A G   S+AV   G V +WG    G+LG G          
Sbjct: 272 RLTPV--QVTGLSGGVA--VAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSM-------- 319

Query: 223 STSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T+  TP + I   EG  V   AAG  HS     +G V+ +G+    +        +  P
Sbjct: 320 -TASLTPVQAIGLSEGEAV---AAGETHSLVARSDGTVWAWGNNIEGQRGDGSAKTSTAP 375

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             ++ L     V  G  H   + S G ++ WG N  G LG G+     +P +V G    S
Sbjct: 376 VQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQRTAPVQVTG---LS 432

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
               V+ G  H+  +  +G +  W            G ++ GQLG G       P  V  
Sbjct: 433 GGVAVAAGDDHSLGLCLDGTVWAW------------GQNTSGQLGDGTTAQ--RPAPVQV 478

Query: 401 GENVKALQVSCGFNHT 416
            E    + V+ G +H+
Sbjct: 479 TELSGVVAVAAGTSHS 494



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 137/287 (47%), Gaps = 23/287 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  +  E   + A+A G +H+L ++  G V+A G N  GQ
Sbjct: 456 WGQNTSGQLGDGTTAQRPAPVQVT--ELSGVVAVAAGTSHSLAVSSDGTVWAWGSNASGQ 513

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P++++GL   VV ++ GY HS A+  DG ++ WG NS  QLG G    
Sbjct: 514 LGDGTTRAR-LTPVQVAGLSG-VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQ 571

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  LSG     AA G+  S+ +   G V  WG    G+LG+G          
Sbjct: 572 R--PTPVRVPGLSGGVA--AAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGT--------- 618

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           + + ++P  +  L G  V +AA  F  S  +  +G V  +GD    ++   +G    R  
Sbjct: 619 ANASFSPVQVTGLSG-GVAVAAGDF-QSLAVRSDGTVRAWGDNIYGQL--GDGTVTTRLA 674

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           P  ++ L     V  G   +  + SGG L+ WG N +G LG G   V
Sbjct: 675 PVGVNGLSGGMAVAAGNGFSLAVHSGGMLHAWGYNTDGQLGHGGPSV 721



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 148/324 (45%), Gaps = 25/324 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG G+   R  P          L  +A G +H+L +   G  +A G N  G+L
Sbjct: 57  GSNTSGQLGDGTTSERRVPAQVVGLSDAVL--VAAGSSHSLAIRSDGTAWAWGHNGSGEL 114

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G          P++++GL  E   ++ G  HS  +  DG ++ WG NS+GQLG G    +
Sbjct: 115 GDGTTF-RRTRPVQVTGLS-EAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTRER 172

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P+  +V  LSG    + A G   S+AV   G V +WG   SG+LG G          +
Sbjct: 173 HVPV--QVAGLSGGV--KVAAGDGHSLAVCLDGTVWAWGRNDSGQLGDGT---------T 219

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RPS 282
                P  +  L GV     AAG  HS  +  +G V+ +G R  D  L      AR  P 
Sbjct: 220 VQRSAPVQVAGLSGVVA--VAAGSSHSLAVRSDGTVWAWG-RNSDGQLGDGTTSARLTPV 276

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L     V  G +H+  + S G ++ WG N  G LG GS+    +P +  G  SE  
Sbjct: 277 QVTGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASLTPVQAIG-LSEG- 334

Query: 343 VDQVSCGWKHT-AAISEGKILTWG 365
            + V+ G  H+  A S+G +  WG
Sbjct: 335 -EAVAAGETHSLVARSDGTVWAWG 357



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 146/324 (45%), Gaps = 39/324 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA GG+H+L +   G V+A G N  GQLG        + P ++ GL   V+ ++ G  HS
Sbjct: 37  LAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSERRV-PAQVVGLSDAVL-VAAGSSHS 94

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            AI  DG  + WG N +G+LG G    +  P+  +V  LS    +  A G   S+ V   
Sbjct: 95  LAIRSDGTAWAWGHNGSGELGDGTTFRRTRPV--QVTGLS--EAEAVAAGDGHSLVVRSD 150

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACID 254
           G V +WG    G+LG G          +   + P  +  L  GVKV   AAG  HS  + 
Sbjct: 151 GTVWAWGWNSDGQLGDGT---------TRERHVPVQVAGLSGGVKV---AAGDGHSLAVC 198

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            +G V+ +G    D     +G   +R  P  ++ L     V  G  H+  + S G ++ W
Sbjct: 199 LDGTVWAWGRN--DSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGTVWAW 256

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
           G N +G LG G+     +P +V G    S    V+ G  H+ A+ S+G +  W       
Sbjct: 257 GRNSDGQLGDGTTSARLTPVQVTG---LSGGVAVAAGMFHSLAVRSDGTVWAW------- 306

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHP 395
                G ++ GQLG G+    + P
Sbjct: 307 -----GQNTRGQLGDGSMTASLTP 325



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 119/274 (43%), Gaps = 31/274 (11%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +++ G  HS AI  DG ++  G N++GQLG G  + +   +P +V  LS       A G 
Sbjct: 36  RLAAGGSHSLAIRPDGTVWAAGSNTSGQLGDGTTSER--RVPAQVVGLSDAVL--VAAGS 91

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G   +WG  GSG LG G         R T       + E E V     AAG
Sbjct: 92  SHSLAIRSDGTAWAWGHNGSGELGDGTT------FRRTRPVQVTGLSEAEAV-----AAG 140

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  +  +G V+ +G  +  ++          P  ++ L    +V  G  H+  +   
Sbjct: 141 DGHSLVVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD 200

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G ++ WG N++G LG G+     +P +V G    S V  V+ G  H+ A+ S+G +  W 
Sbjct: 201 GTVWAWGRNDSGQLGDGTTVQRSAPVQVAG---LSGVVAVAAGSSHSLAVRSDGTVWAW- 256

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
                      G +S GQLG G     + P  V 
Sbjct: 257 -----------GRNSDGQLGDGTTSARLTPVQVT 279



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 103/236 (43%), Gaps = 31/236 (13%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   S+A+   G V + G+  SG+LG G          +TSE   R+  ++ G+   +
Sbjct: 38  AAGGSHSLAIRPDGTVWAAGSNTSGQLGDG----------TTSER--RVPAQVVGLSDAV 85

Query: 243 -AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             AAG  HS  I  +G  + +G     ++         RP  ++ L  +E V  G  H+ 
Sbjct: 86  LVAAGSSHSLAIRSDGTAWAWGHNGSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSL 145

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
           V+ S G ++ WG N +G LG G+    H P +V G    S   +V+ G  H+ A+  +G 
Sbjct: 146 VVRSDGTVWAWGWNSDGQLGDGTTRERHVPVQVAG---LSGGVKVAAGDGHSLAVCLDGT 202

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           +  W            G +  GQLG G  V    P  V     V A  V+ G +H+
Sbjct: 203 VWAW------------GRNDSGQLGDGTTVQRSAPVQVAGLSGVVA--VAAGSSHS 244


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 24/321 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SAF+ + +  L  +CG   H++ LTETG V++ G  DF
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3134

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ ++VVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3135 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3193

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K++P   +V  L G    Q + G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 3194 TSNKMLP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3246

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
                ST++Y P+ +++L    +K    G   S  +  +G VY FG   +    D ML   
Sbjct: 3247 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNR 3302

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             N    PSL     + E++  G  H   L+S G++Y WG N  G LG+G  + +  P  +
Sbjct: 3303 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLI 3360

Query: 335  QGPFSESPVDQVSCGWKHTAA 355
                    + Q+S G  H++A
Sbjct: 3361 TA-LQGKNIKQISAGRCHSSA 3380



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   ++  P         ++K ++       HTL +T  G V++ G  ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY 496

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   N      P  I G    K VV  S GY HS+A+T DGELY WG+   G+LG  
Sbjct: 497 GKLG-HGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDFGRLGHS 555

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   +PT V+ +SG+   Q A G   ++AV   G+ V S+G G +G+LGHG  + +
Sbjct: 556 DSQSR--NMPTLVKDISGV--GQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRV 611

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E   
Sbjct: 612 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 661

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
           + RP  +  L  ++  ++ CG  H   L+   E+Y WG+N  G  G G     +  P++V
Sbjct: 662 SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKKV 721

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q++ G  H    TA  ++ +++ W
Sbjct: 722 LG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 175/391 (44%), Gaps = 48/391 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG YG+L  G+  +   P +  +  +   + + CG   +  +   G V A G   +G
Sbjct: 3024 LWGNGRYGQLA-GTGTNLTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAVGEGQYG 3080

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    + P  IS  +  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3081 RLGQGNSDDLYV-PTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH 3139

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q A GF  S  VT  GK+ ++G+G SGRLG       
Sbjct: 3140 GNNERQRRP--KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQ------ 3191

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
                RSTS +  P  +  LEG  V   + G  H+  +  +G  V+ FGD    K+     
Sbjct: 3192 ----RSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3247

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P  + +L     ++V CG   + V+   G +YT+G      L    +    +P+ 
Sbjct: 3248 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERLIGLPDSMLKNRSNPQV 3307

Query: 334  V---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
            V   +G F    ++ ++ G +H  A+S  G +  WG             +S GQLG G+ 
Sbjct: 3308 VPSLEGLF----IEDIAVGCEHVLALSSTGDVYAWGC------------NSEGQLGLGHC 3351

Query: 390  VDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                 PT++    G+N+K  Q+S G  H+ A
Sbjct: 3352 NPVKEPTLITALQGKNIK--QISAGRCHSSA 3380



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 154/334 (46%), Gaps = 33/334 (9%)

Query: 92  VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           VY  G N   QL  G  E I   L P    G   +   I  G + + +++ DG +   GK
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 438

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAGGSGR 208
            S G+LGLG    + +P    +E    I    ++ G +  ++A+T  G+V SWG G  G+
Sbjct: 439 GSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEYGK 498

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAV 267
           LGHG          S ++  P++I+     K+ + A+AG+ HSA + ++G +Y +G+   
Sbjct: 499 LGHGN---------SATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGDF 549

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSID 326
            ++   +      P+L+  +    +V CG  HT  +   G  ++++G  +NG LG G  +
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISGVGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTN 609

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            ++ P+ ++       + +V  G + + A+ S G++  WG G   G  S +  S      
Sbjct: 610 RVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS------ 662

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  + P  V      K + +SCG +H  AL
Sbjct: 663 -------LRPRFVEDLSITKIIDISCGDSHCLAL 689



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 121/277 (43%), Gaps = 34/277 (12%)

Query: 143  ELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            ++Y+WG    GQL G G      + +PT    LS   T+Q   G   S  +   G V + 
Sbjct: 3021 DVYLWGNGRYGQLAGTGTN----LTVPTLAPSLSQ--TQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENGR 258
            G G  GRLG G    +         Y P +I   +G  V   + + G   HS  + E G 
Sbjct: 3075 GEGQYGRLGQGNSDDL---------YVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGE 3125

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSN 315
            V+ +GD    K+        RRP  I  L   E+VV   CG  H+ V+T+ G+L+T+GS 
Sbjct: 3126 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3184

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
            E+G LG  S      PERV        V QVSCG  HT  +S   +  W +G        
Sbjct: 3185 ESGRLGQRSTSNKMLPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFG-------- 3235

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            DG    G+LG G+     +P  V    N    +V CG
Sbjct: 3236 DGDY--GKLGAGSSTAKYYPQKVEQLCNKGMKKVCCG 3270



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G+YG+LG G+  ++  P +     F K  + A A G  H+  +T+ G +Y  G  DF
Sbjct: 491 WGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASA-GYRHSAAVTKDGELYTWGEGDF 549

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           G+LG S++   ++  L   ISG    V Q++ G  H+ A+  DG  ++ +G   NG+LG 
Sbjct: 550 GRLGHSDSQSRNMPTLVKDISG----VGQVACGSSHTIAVAQDGRTVWSFGGGDNGKLGH 605

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G   ++   G + S+A+T  G+V +WG G    LG G     
Sbjct: 606 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 658

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                 T+   PR +++L   K+   + G  H   +     VY +G+  +
Sbjct: 659 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 703



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 595 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 654

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  +  L   +++ IS G  H  A++ + E+Y WG N+ GQ G G  +
Sbjct: 655 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 712

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSW 201
              I  P KV  L G+  +Q   G   S+   AV    ++++W
Sbjct: 713 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 754



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 36/255 (14%)

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           CL    T  A+ G E   AVT    V  WG+  S +L  G    IL          P+L 
Sbjct: 363 CLCSSSTDAASPGTEGD-AVT----VYVWGSNSSHQLAEGTLEKIL---------LPKLT 408

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +     +     AG   +  +  +G V   G  +  ++   + N+   P  +   P+   
Sbjct: 409 QGFSDAQT--IEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNI 466

Query: 293 VVCGGY-----HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                      HT  +T  GE+++WG  E G LG G+      P+ +QGP     V   S
Sbjct: 467 KKVSSSKGSDGHTLAITVDGEVFSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSAS 526

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
            G++H+AA++ +G++ TWG     G F        G+LGH +      PT+V     V  
Sbjct: 527 AGYRHSAAVTKDGELYTWG----EGDF--------GRLGHSDSQSRNMPTLVKDISGVG- 573

Query: 407 LQVSCGFNHTGALLE 421
            QV+CG +HT A+ +
Sbjct: 574 -QVACGSSHTIAVAQ 587



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG    +SR  P +        +  +ACG +HT+ + + G  V++ G  D G
Sbjct: 544 WGEGDFGRLGHSDSQSRNMPTLVKDIS--GVGQVACGSSHTIAVAQDGRTVWSFGGGDNG 601

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  I  L   ++ ++  G   S A+T  G+++ WG  S   LG G  
Sbjct: 602 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 658

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE LS       + G    +A++   +V +WG    G+ G G  S+ +  
Sbjct: 659 ETTSL-RPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 716

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P+ +  LEGV ++   AG  HS
Sbjct: 717 -------RPKKVLGLEGVSIQQITAGTSHS 739



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 17/149 (11%)

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            G +   P+L   L  +++VVCG   + ++ S G +   G  + G LG G+ D L+ P  +
Sbjct: 3037 GTNLTVPTLAPSLSQTQQVVCGQNCSFLIQSNGVVTAVGEGQYGRLGQGNSDDLYVPTII 3096

Query: 335  QGPFSESPVDQV--SCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
               F    V Q+  SCG   H+ A++E G++ +WG     G F        G+LGHGN+ 
Sbjct: 3097 SA-FQGYVVTQLVTSCGSDGHSMALTETGEVFSWG----DGDF--------GKLGHGNNE 3143

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                P  +   +    +Q++CGF H+  +
Sbjct: 3144 RQRRPKQIEALQGEDVVQLACGFRHSAVV 3172


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/332 (34%), Positives = 171/332 (51%), Gaps = 37/332 (11%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 4097

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 4098 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 4156

Query: 160  KAAKVIPIPTKVECLSGIFTKQA---------ALGFEQSVAVTGGGKVL-SWGAGGSGRL 209
             + K   +P +V  L G    QA         A G   ++AV+  G ++ ++G G  G+L
Sbjct: 4157 TSNK--KLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDYGKL 4214

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVD 268
            G G          ST++ +P+ +  L G+ +K  A G   S  + ++G+VY FG DR + 
Sbjct: 4215 GLGN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIG 4265

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                +  NH  RP  +  L     E+V  G  HT  LTS G++Y WGSN  G LG+G  +
Sbjct: 4266 LPEGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTN 4324

Query: 327  VLHSPERV---QGPFSESPVDQVSCGWKHTAA 355
             +  P  V   QG      V Q+S G  H+AA
Sbjct: 4325 HVREPTLVTVLQG----KNVRQISAGRCHSAA 4352



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + QVS G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 23/256 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 4092 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 4151

Query: 103  LGISENIGYSLEPLRISGL----------KKEVVQISTGYHHSSAITVDGEL-YMWGKNS 151
            LG+       L P R++ L          K  +  ++ G +H+ A++ DG + + +G   
Sbjct: 4152 LGLGNTSNKKL-PERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGD 4210

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             G+LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G+V ++G      L  
Sbjct: 4211 YGKLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPE 4268

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
            G         R+ +   P+ +  L GV ++  A G  H+  +   G +Y +G  +  ++ 
Sbjct: 4269 G---------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNSEGQLG 4319

Query: 272  FQEGNHARRPSLISKL 287
                NH R P+L++ L
Sbjct: 4320 LGHTNHVREPTLVTVL 4335



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 174/396 (43%), Gaps = 49/396 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 3987 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQA--QQVICGQNCTFVIQANGTVLACGEGSYG 4043

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 4044 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 4102

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 4103 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 4159

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA---------AAGFLHSACIDENGR-VYIFGDRAV 267
                    +  P  +  LEG ++  A         A G  H+  +  +G  V+ FGD   
Sbjct: 4160 --------KKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWAFGDGDY 4211

Query: 268  DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
             K+          P  +  L     ++V CG   +  LT  G++YT+G +    L  G  
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRA 4271

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
               + P++V    +   ++ V+ G +HT A+ S G I  WG             +S GQL
Sbjct: 4272 RNHNRPQQVPV-LAGVVIEDVAVGAEHTLALTSTGDIYAWG------------SNSEGQL 4318

Query: 385  GHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
            G G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 4319 GLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 4352



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 158/344 (45%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCG-WKHTAAISEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G     +  S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLSLTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 680



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 39/316 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3959 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 4014

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 4015 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 4064

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 4065 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 4123

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--------PFSESPV 343
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV            ++S +
Sbjct: 4124 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSII 4183

Query: 344  DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
              V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    
Sbjct: 4184 CSVACGLNHTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCG 4233

Query: 404  VKALQVSCGFNHTGAL 419
            +   +V+CG   + AL
Sbjct: 4234 IGIKKVACGTQFSVAL 4249



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+++T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAW 745



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S ++T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQVSAGTSHS 730



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 157/313 (50%), Gaps = 20/313 (6%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P  C  F    +  + CG  HT+FL + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P  +  L  ++ V +S G  H+ A+   G+++ WG  SNGQLGL  
Sbjct: 64  GQLGHEKS---RKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + + +P  ++CLS +   Q A G+  S A++ GG+V SWG    G+LG G   S + 
Sbjct: 121 -FEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TP++I+ L+G+     +AG  HS  I  +G V+ +G     ++   +     
Sbjct: 180 --------TPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRW 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P+L+  L  S+ V+   CG  HT  LT    ++T+G+   G LG    +   +P +V  
Sbjct: 232 FPALLKSL-RSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV-F 289

Query: 337 PFSESPVDQVSCG 349
               + V Q+SCG
Sbjct: 290 ELMGNVVTQISCG 302



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 145/323 (44%), Gaps = 39/323 (12%)

Query: 100 FGQLG---ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           +GQLG   I E I   +EP +      K V  +  G  H+  +  DG +Y  G N  GQL
Sbjct: 9   YGQLGLGGIDEEI--VVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K   K    P  V  L        + G   ++A+   G+V SWG G +G+LG     
Sbjct: 67  GHEKSRKK----PEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFE 122

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQE 274
             +          PR IK L  V++   A G+ HS  + + G+V+ +G     ++ L   
Sbjct: 123 ECVR--------VPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMH 174

Query: 275 GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           G+    P +I  L   P+++ +  GG H+  +T  G ++ WG N+ G LG+        P
Sbjct: 175 GSSISTPQIIQSLQGIPFAQ-LSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             ++   S+  V  VSCG  HTAA+++ + + T+G GG             GQLGH    
Sbjct: 234 ALLKSLRSQR-VIFVSCGEDHTAALTKLRGVFTFGAGGY------------GQLGHNCTN 280

Query: 391 DYIHP-TIVNFGENVKALQVSCG 412
             I+P  +     NV   Q+SCG
Sbjct: 281 HEINPRKVFELMGNV-VTQISCG 302



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 127/283 (44%), Gaps = 39/283 (13%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K E   G        G + +V +   G V + G    
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+V+ +G  +
Sbjct: 64  GQLGHEK-----------SRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGS 112

Query: 267 VDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             ++    F+E    R P  I  L   +  +V CG +H+  L+ GG++++WG N+ G LG
Sbjct: 113 NGQLGLNNFEEC--VRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLG 170

Query: 322 IG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           +G    SI      + +QG     P  Q+S G  H+ AI+  G +  WG           
Sbjct: 171 LGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWG----------- 215

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             +  GQLG  +  D   P ++    + + + VSCG +HT AL
Sbjct: 216 -KNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAAL 257


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  139 bits (351), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 111/390 (28%), Positives = 181/390 (46%), Gaps = 44/390 (11%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+    +LG       +S+  P     F    + +++ G  ++  LTE G VY  G   
Sbjct: 603 WGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGS 662

Query: 100 FGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
                   LGI + I   L P+++  L  ++V +S G++HS+A+  +GEL  WG    GQ
Sbjct: 663 VKNPPVPVLGIPQ-IEDQLLPIKLESLT-DIVVVSIGFYHSAAVRANGELLTWGVGEEGQ 720

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +V   P  ++ L+  +  Q   G + ++ +T  GKV +WG+   G+LG G  
Sbjct: 721 LGHGDTQNQV--EPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGD- 777

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T    P  +  LE   V   A+G  H A +  +  V +FG+ A        
Sbjct: 778 --------TTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNGAA----MGA 825

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +    P+L+  L Y   +++ CG Y T  ++  G++YTWG+ +   LG G+     +P+
Sbjct: 826 ASIISIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQE--LGHGNNQTESTPK 883

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            V+   ++S + Q+SCG +HTA +++ G+I T             G  S GQLGH    D
Sbjct: 884 LVEALRNQS-IRQISCGGRHTAFLTDSGRIFT------------SGKDSFGQLGHQAG-D 929

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              P  +        + VSCG N+  AL +
Sbjct: 930 QNKPKKIESLTKTTFISVSCGENYNIALFD 959


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 182/369 (49%), Gaps = 46/369 (12%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRI 118
           + P VCS   +  +  LACG  HT F+ + G +Y  G N  G+LGI  +++  S +P  +
Sbjct: 13  YYPRVCSF--QIVIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV 70

Query: 119 SGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           S L K +V+Q+S G+ H+ AI   GEL+ WG +S GQLG+    +   P       L GI
Sbjct: 71  SALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGI 130

Query: 178 --FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
             F    + G+  +VAV   G+V S+G+G  G+LG G ++          +Y P L+  L
Sbjct: 131 NTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQN---------KQYKPFLLNSL 181

Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSE- 291
            + +KVK    GF H+  +DE+GRVY  G  D         EGN    P L+ +L +S  
Sbjct: 182 SQIIKVK---CGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGN-ISSPRLVLELEHSFI 237

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           + +  G H+  +T   E+Y +G ++ G         L+ P+ V+    +  V+++S G  
Sbjct: 238 KKIFAGSHSAAITDANEIYFFGKSQLG-------QFLY-PQLVR--ICQGDVNEISIGNH 287

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
              A++ +GK+ +WG             +  GQLG G+    I P++V      K +  +
Sbjct: 288 FGVAVTYDGKVYSWGI------------NQQGQLGQGDSDVRIIPSLVEPLNEKKVISAT 335

Query: 411 CGFNHTGAL 419
           CG N+   L
Sbjct: 336 CGENYVICL 344



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 157/323 (48%), Gaps = 31/323 (9%)

Query: 44  GNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G+   G+LG+G  SL++ ++P + SA  K+ +  ++CG +HT  + ++G +++ G +  G
Sbjct: 47  GSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEG 106

Query: 102 QLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           QLGI+ N G    P  ++     G+   V  +S GY+H+ A+  +G++  +G    GQLG
Sbjct: 107 QLGINSN-GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLG 165

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G +  +  P    +  LS I   +   GF  ++ +   G+V S G    G+LG G    
Sbjct: 166 TGNQNKQYKPFL--LNSLSQII--KVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEG 221

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +         +PRL+ ELE   +K   AG  HSA I +   +Y FG   + + L+    
Sbjct: 222 NIS--------SPRLVLELEHSFIKKIFAG-SHSAAITDANEIYFFGKSQLGQFLY---- 268

Query: 277 HARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
               P L+        E+  G +    +T  G++Y+WG N+ G LG G  DV   P  V+
Sbjct: 269 ----PQLVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVE 324

Query: 336 GPFSESPVDQVSCGWKHTAAISE 358
            P +E  V   +CG  +   + +
Sbjct: 325 -PLNEKKVISATCGENYVICLGQ 346



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 112/245 (45%), Gaps = 26/245 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+G  G+LG G+   +++P + ++  +  +  + CG  HTLFL E+G VY+ GLND GQ
Sbjct: 156 FGSGKKGQLGTGNQNKQYKPFLLNSLSQ--IIKVKCGFYHTLFLDESGRVYSCGLNDEGQ 213

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N G    P  +  L+   ++      HS+AIT   E+Y +GK+  GQ        
Sbjct: 214 LGQGHNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQF------- 266

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V    G    + ++G    VAVT  GKV SWG    G+LG G          
Sbjct: 267 ---LYPQLVRICQGD-VNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGD--------- 313

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDRAVDKMLFQEGNHARR 280
           S     P L++ L   KV  A  G  +  C+ +  N R+     +   KML  +      
Sbjct: 314 SDVRIIPSLVEPLNEKKVISATCGENYVICLGQVMNSRLAKLASQK--KMLKFQSPDNNN 371

Query: 281 PSLIS 285
            SLI+
Sbjct: 372 NSLIN 376



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 20/137 (14%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCG 349
           ++ CG  HT  +   G LYT GSN  G LGIG   + +S  P+ V    S+  V QVSCG
Sbjct: 26  QLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLV-SALSKYKVMQVSCG 84

Query: 350 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF----GENV 404
             HT AI + G++ +WG             SS GQLG  ++  + +P +VNF    G N 
Sbjct: 85  HSHTCAIIDSGELFSWG------------DSSEGQLGINSNGSHYNPQLVNFSDLKGINT 132

Query: 405 KALQVSCGFNHTGALLE 421
               VSCG+ HT A+L+
Sbjct: 133 FVTDVSCGYYHTVAVLK 149


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 24/321 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SAF+ + +  L  +CG   H++ LTETG V++ G  DF
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDF 3795

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ ++VVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3796 GKLGHGNN-ERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRS 3854

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSIL 218
             + K+ P   +V  L G    Q + G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 3855 TSNKMQP--ERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGS----- 3907

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----DKMLFQE 274
                ST++Y P+ +++L    +K    G   S  +  +G VY FG   +    D ML   
Sbjct: 3908 ----STAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNR 3963

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             N    PSL     + E++  G  H   L+S G++Y WG N  G LG+G  +++  P  +
Sbjct: 3964 SNPQVVPSLEGL--FIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLI 4021

Query: 335  QGPFSESPVDQVSCGWKHTAA 355
                    + Q+S G  H++A
Sbjct: 4022 TA-LQGKNIKQISAGRCHSSA 4041



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 161/335 (48%), Gaps = 31/335 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGA--HTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++  P      E H    K  +  G+  HTL +T  G V++ G  +
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKL-VLEPHRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGE 452

Query: 100 FGQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +G+LG   N      P  + G    K VV  S GY HS+A+T DGELY WG+   G+LG 
Sbjct: 453 YGKLG-HGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGDFGRLGH 511

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESS 216
               ++    PT V+ +SG+   Q A G   ++AV   G+ + S+G G +G+LGHG  + 
Sbjct: 512 SDSQSR--NTPTLVKDISGV--GQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNR 567

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +         Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E  
Sbjct: 568 V---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT 618

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPER 333
            + RP  +  L  ++  ++ CG  H   L+   E+Y WG+N  G  G G     +  P++
Sbjct: 619 -SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPITRPKK 677

Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
           V G      + Q++ G  H    TA  ++ +++ W
Sbjct: 678 VLG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 711



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 174/391 (44%), Gaps = 48/391 (12%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG YG+L  G+  +   P +     +   + + CG   +  +   G V A G   +G
Sbjct: 3685 LWGNGRYGQLA-GTGTNLTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMAVGEGQYG 3741

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   N      P  IS  +  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 3742 RLG-QGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGH 3800

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q A GF  S  VT  GK+ ++G+G SGRLG       
Sbjct: 3801 GNNERQRRP--KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSGESGRLGQ------ 3852

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQEG 275
                RSTS +  P  +  LEG  V   + G  H+  +  +G  V+ FGD    K+     
Sbjct: 3853 ----RSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSS 3908

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 P  + +L     ++V CG   + VL + G +YT+G      L    +    +P+ 
Sbjct: 3909 TAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQERLIGLPDSMLKNRSNPQV 3968

Query: 334  V---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
            V   +G F    ++ ++ G +H  A+S  G I  WG             +S GQLG G+ 
Sbjct: 3969 VPSLEGLF----IEDIAVGCEHVLALSSTGDIYAWGC------------NSEGQLGLGHC 4012

Query: 390  VDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                 PT++    G+N+K  Q+S G  H+ A
Sbjct: 4013 NLVKEPTLITALQGKNIK--QISAGRCHSSA 4041



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 123/278 (44%), Gaps = 34/278 (12%)

Query: 142  GELYMWGKNSNGQL-GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
             ++Y+WG    GQL G G      + +PT   CLS   T+Q   G   S  +   G V++
Sbjct: 3681 SDVYLWGNGRYGQLAGTGTN----LTLPTLAPCLSQ--TQQVVCGQNCSFLIQSNGAVMA 3734

Query: 201  WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFL-HSACIDENG 257
             G G  GRLG G    +         + P +I   +G  V   + + G   HS  + E G
Sbjct: 3735 VGEGQYGRLGQGNSDDL---------FVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3785

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
             V+ +GD    K+        RRP  I  L   E+VV   CG  H+ V+T+ G+L+T+GS
Sbjct: 3786 EVFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGS 3844

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
             E+G LG  S      PERV        V QVSCG  HT  +S   +  W +G       
Sbjct: 3845 GESGRLGQRSTSNKMQPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFG------- 3896

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             DG    G+LG G+     +P  V    N    +V CG
Sbjct: 3897 -DG--DYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCG 3931



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 155/336 (46%), Gaps = 37/336 (11%)

Query: 92  VYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           VY  G N   QL  G  E I   L P    G   +   I  G + + +++ DG +   GK
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI---LLPKLTQGFS-DAQTIEAGQYCTFSVSTDGSVKACGK 395

Query: 150 NSNGQLGLGKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            S G+LGLG    + +P    +E    +  +F+ + + G   ++A+T  G+V SWG G  
Sbjct: 396 GSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDG--HTLAITVDGEVFSWGDGEY 453

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVYIFGDR 265
           G+LGHG          S ++  P++++     K+ + A+AG+ HSA +  +G +Y +G+ 
Sbjct: 454 GKLGHGN---------SATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEG 504

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGS 324
              ++   +      P+L+  +    +V CG  HT  +   G  ++++G  +NG LG G 
Sbjct: 505 DFGRLGHSDSQSRNTPTLVKDISGVGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGD 564

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQ 383
            + ++ P+ ++       + +V  G + + A+ S G++  WG G   G  S +  S    
Sbjct: 565 TNRVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS---- 619

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                    + P  V      K + +SCG +H  AL
Sbjct: 620 ---------LRPRFVEDLSITKIIDISCGDSHCLAL 646



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 110/230 (47%), Gaps = 22/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA--FEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+G+YG+LG G+  ++  P +     F K  + A A G  H+  +T  G +Y  G  DF
Sbjct: 448 WGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASA-GYRHSAAVTNDGELYTWGEGDF 506

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGL 157
           G+LG S++   +   L   ISG    V Q++ G  H+ A+  DG  ++ +G   NG+LG 
Sbjct: 507 GRLGHSDSQSRNTPTLVKDISG----VGQVACGSSHTIAVAQDGRTMWSFGGGDNGKLGH 562

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G      +  P  +E L G   ++   G + S+A+T  G+V +WG G    LG G     
Sbjct: 563 GD--TNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS--- 615

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                 T+   PR +++L   K+   + G  H   +     VY +G+  +
Sbjct: 616 -----ETTSLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTM 660



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 7/184 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 552 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 611

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  +  L   +++ IS G  H  A++ + E+Y WG N+ GQ G G  +
Sbjct: 612 CGSSETT--SLRPRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTS 669

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              I  P KV  L G+  +Q   G   S+   AV    ++++W       L     + + 
Sbjct: 670 TP-ITRPKKVLGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDLEESTFTYLC 728

Query: 219 GFLR 222
            FL+
Sbjct: 729 NFLK 732



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 118/286 (41%), Gaps = 79/286 (27%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           A+TV    Y+WG NS+ QL  G    + I +P   +  S   T +A  G   + +V+  G
Sbjct: 337 AVTV----YVWGSNSSHQLAEG--TLEKILLPKLTQGFSDAQTIEA--GQYCTFSVSTDG 388

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V + G G  GRLG G          S ++  P+                          
Sbjct: 389 SVKACGKGSYGRLGLGD---------SNNQSMPK-------------------------- 413

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
            ++ +   R + K+   +G+                      HT  +T  GE+++WG  E
Sbjct: 414 -KLVLEPHRNIKKVFSSKGSDG--------------------HTLAITVDGEVFSWGDGE 452

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 375
            G LG G+      P+ VQGP     V   S G++H+AA++ +G++ TWG     G F  
Sbjct: 453 YGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWG----EGDF-- 506

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G+LGH +      PT+V     V   QV+CG +HT A+ +
Sbjct: 507 ------GRLGHSDSQSRNTPTLVKDISGVG--QVACGSSHTIAVAQ 544



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG    +SR  P +        +  +ACG +HT+ + + G  +++ G  D G
Sbjct: 501 WGEGDFGRLGHSDSQSRNTPTLVKDIS--GVGQVACGSSHTIAVAQDGRTMWSFGGGDNG 558

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  I  L   ++ ++  G   S A+T  G+++ WG  S   LG G  
Sbjct: 559 KLGHGDT-NRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSC--LGCGSS 615

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE LS       + G    +A++   +V +WG    G+ G G  S+ +  
Sbjct: 616 ETTSLR-PRFVEDLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTPIT- 673

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P+ +  LEGV ++   AG  HS
Sbjct: 674 -------RPKKVLGLEGVSIQQITAGTSHS 696



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 17/149 (11%)

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            G +   P+L   L  +++VVCG   + ++ S G +   G  + G LG G+ D L  P  +
Sbjct: 3698 GTNLTLPTLAPCLSQTQQVVCGQNCSFLIQSNGAVMAVGEGQYGRLGQGNSDDLFVPTII 3757

Query: 335  QGPFSESPVDQV--SCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
               F    V Q+  SCG   H+ A++E G++ +WG     G F        G+LGHGN+ 
Sbjct: 3758 SA-FQGYVVTQLVTSCGSDGHSMALTETGEVFSWG----DGDF--------GKLGHGNNE 3804

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                P  +   +    +Q++CGF H+  +
Sbjct: 3805 RQRRPKQIEALQGEDVVQLACGFRHSAVV 3833


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 71  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 127

Query: 121 L-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 128 LADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 186

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 187 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 238

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 239 LAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 297

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 298 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 356

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 357 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 388



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A    ++  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 121 KPEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 180

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 181 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 239

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V +WG   +G+LG   E             +P  +K L   K
Sbjct: 240 AQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE---------DRESPCHVKLLRTQK 290

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 291 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 350

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 351 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 390



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 161/335 (48%), Gaps = 41/335 (12%)

Query: 98  NDFG--QLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           ND G  Q GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ 
Sbjct: 52  NDLGASQPGISTNLRGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 110

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG  ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG  
Sbjct: 111 GQLGHEREGNK----PEQIGALADQNIVHVACGESHSLALSDRGQLFSWGAGSDGQLG-- 164

Query: 213 QESSILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
                   L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++
Sbjct: 165 --------LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 216

Query: 271 ----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +
Sbjct: 217 GLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDEE 275

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
              SP  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLG
Sbjct: 276 DRESPCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLG 322

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           H +  D ++P  V      +  Q++CG  HT A +
Sbjct: 323 HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFV 357



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LGL + E S   P +     + ++  ++CG  H L L   G  +  G N  G
Sbjct: 155 WGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHG 214

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +       P R+  L+   + Q++ G  HS A+++ G ++ WG N+ GQLGL  +
Sbjct: 215 QLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAGQLGLSDE 274

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +    P  V+ L        + G E +  +T  G V ++GAG  G+LGH   +     
Sbjct: 275 EDR--ESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMN----- 327

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
                E  PR + EL G +V   A G  H+ A +  +G +Y FG
Sbjct: 328 ----DEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 367



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 94/178 (52%), Gaps = 6/178 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G V+A G+N+ G
Sbjct: 208 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFAWGMNNAG 267

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+S+       P  +  L+ ++VV IS G  H++ +T  G ++ +G  S GQLG    
Sbjct: 268 QLGLSDEEDRE-SPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 326

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSI 217
             +V   P +V  L G    Q A G + ++A V   G + ++G G  G+LG G   ++
Sbjct: 327 NDEV--NPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNV 382



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 261 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 320

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 321 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 379

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 380 CNVKCPSPVK 389


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 189/378 (50%), Gaps = 39/378 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G YG+LG G   ++  P          ++A+A G  H+L LT++G VY+ G   FG+
Sbjct: 52  FGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGLFGR 109

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N    LEP +I GL  ++  I+ G  HS A+T  G++Y +G   NG  GLG    
Sbjct: 110 LG-HGNTDSQLEPKKIEGL-SDIQAIAAGDFHSLALTKSGDVYSFG---NGTSGLGHGNT 164

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P K+E LS +  +  A G   S+A+T  G V S+G G  GRLGHG          
Sbjct: 165 EDQSTPKKIESLSDV--QAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGD--------- 213

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S+  P+ I++L  ++    AAG  HS  + ++G VY FG     ++   +  +   P 
Sbjct: 214 TDSQLEPKKIEDLSDIQA--IAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPK 271

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            I  L   + V  G  H+  LT  GE+Y++G    G LG G  D   +P++++G      
Sbjct: 272 KIEDLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEG---LKD 328

Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           +  ++ G  H+ A+++ G + ++G G           +SG  LGHG+  + + P  +   
Sbjct: 329 IQAIAAGDFHSLALTKSGDVYSFGNG-----------TSG--LGHGDTANQLEPKKIEGL 375

Query: 402 ENVKALQVSCGFNHTGAL 419
            +++A  ++ G NH+ AL
Sbjct: 376 TDIQA--IAAGANHSLAL 391



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 38/331 (11%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            V++ G+  +G+LG  +     L P +I GL  ++  I+ G +HS A+T  G++Y +G  
Sbjct: 48  SVFSFGMGMYGKLGHGDTAN-QLAPKKIEGLS-DIQAIAAGTNHSLALTKSGDVYSFGFG 105

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G+LG G   +++ P   K+E LS I  +  A G   S+A+T  G V S+G G SG LG
Sbjct: 106 LFGRLGHGNTDSQLEP--KKIEGLSDI--QAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          +  + TP+ I+ L  V+    AAG  HS  + ++G VY FG     ++
Sbjct: 161 HG---------NTEDQSTPKKIESLSDVQA--IAAGGNHSLALTKSGDVYSFGFGLFGRL 209

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
              + +    P  I  L   + +  GG H+  LT  G++Y++G   +G LG G  +   +
Sbjct: 210 GHGDTDSQLEPKKIEDLSDIQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLT 269

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++++     S +  V+ G  H+ A+++ G++ ++G G +            GQLGHG+ 
Sbjct: 270 PKKIE---DLSDIQAVAAGANHSLALTKSGEVYSFGRGNT------------GQLGHGDT 314

Query: 390 VDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 419
            D + P  +   E +K +Q ++ G  H+ AL
Sbjct: 315 DDQLTPKKI---EGLKDIQAIAAGDFHSLAL 342


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 162/335 (48%), Gaps = 21/335 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+ G G  ++   P    A +   +   A G  ++ F+T  G +Y TG ND  Q
Sbjct: 42  WGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQ 101

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +    +LEP+R+S L+   V  ++ G  H  A+  +G L  WG N  GQLG G+  
Sbjct: 102 LGV-KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVG 160

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A     P  ++ + G    + A G   S+A+T  G+V S+G G  G LGHG         
Sbjct: 161 ASAA-QPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGD-------- 211

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P L++ L    +   AAG   SA +  +GRV+ +G     ++   E  +A  P
Sbjct: 212 -VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLP 270

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-------IDVLHSPERV 334
             +  +  + +V CG +H   LT  GE+YTWG + +G LG GS          L SP RV
Sbjct: 271 QPVPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRV 330

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
               ++  + QVS G +H+  +S G+ L WG G +
Sbjct: 331 DS-LADQSIRQVSAGARHSFFVSPGEQL-WGAGAN 363



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 136/314 (43%), Gaps = 28/314 (8%)

Query: 41  ALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A WG+ +YG+LG G +  S  +P V           +A G  H+L LT +G VY+ G   
Sbjct: 144 AAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGS 203

Query: 100 FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FG LG  + +    +P  +  L  E +V I+ G + S+A+++ G ++ WG+N  GQLG G
Sbjct: 204 FGALGHGD-VNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNG 262

Query: 159 KKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--- 214
           +     +P P     + GI    Q A G    +A+T  G+V +WG   SG+LG G     
Sbjct: 263 EFGNAFLPQP-----VPGIEQAVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGS 317

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            ++ G L S     P  +  L    ++  +AG  HS  +    +++  G     ++  Q 
Sbjct: 318 EALNGCLCS-----PSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEGQLALQS 372

Query: 275 GNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE------NGCLGIGSI 325
                 P+ +     LP    V  G +   VL     L   G           C+    +
Sbjct: 373 VPSVALPTRVPGLPGLPMRFAVAAGDHSIAVLDESSGLQNGGLQRRTSGPCRSCMMTLQM 432

Query: 326 --DVLHSPERVQGP 337
             D+LH  E   GP
Sbjct: 433 PPDLLHYAEAATGP 446



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 149/358 (41%), Gaps = 78/358 (21%)

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           EP+   G+++++      +           LY WG++  GQ G G+      P P  V+ 
Sbjct: 14  EPMEADGMERQL-----SWALPELPPAVSSLYTWGRSDLGQTGSGRDQNSTAPEP--VQA 66

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRS--------- 223
           L G     AA G   S  VT  G++ + G+  + +LG  G+E ++     S         
Sbjct: 67  LQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHG 126

Query: 224 ---------------------TSEY-------------TPRLIKELEGVKVKIAAAGFLH 249
                                ++EY              PR++K + G      AAG  H
Sbjct: 127 VACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATH 186

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
           S  +  +G+VY FG+ +   +   + N+  +P+L+  L + E +V    G Y +  ++  
Sbjct: 187 SLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQAL-WPEAIVSIAAGEYFSAAVSLS 245

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           G ++TWG N+ G LG G       P+ V  P  E  V QV+CG  H  A++  G++ TWG
Sbjct: 246 GRVFTWGRNKYGQLGNGEFGNAFLPQPV--PGIEQAV-QVACGDHHCIALTRWGEVYTWG 302

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVD-------YIHPTIVNFGENVKALQVSCGFNHT 416
                       HSS GQLG G+++           P+ V+   +    QVS G  H+
Sbjct: 303 L-----------HSS-GQLGQGSNLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHS 348


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  139 bits (349), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 50/317 (15%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF-TK 180
            +K  +++S G+ H + I+  GEL+ WGKN +GQLG G    K+   P ++E   G     
Sbjct: 1217 EKRAIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPII 1276

Query: 181  QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
                G E S+ V     V SWG    G+LGHG         +S S+  P++I+++ G K+
Sbjct: 1277 MVECGGEHSICVDSDYVVYSWGQDKFGQLGHGT--------KSVSQNRPKIIEDISGQKI 1328

Query: 241  KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEE------- 292
            +  AAGF H+  + ++G +Y FG        + +       S +SK +P   E       
Sbjct: 1329 QAIAAGFAHTIVLKKSGELYSFG--------YGDQGQLGHGSFVSKSIPTRIELNTIVGI 1380

Query: 293  ---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                     + CG  H+ + +  GE+Y+WG  + G LG G+ + +  P  ++   +   V
Sbjct: 1381 QHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIE---ALKGV 1437

Query: 344  DQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++SCG  +T A ++ K + +WG G               +LGHG+D +   P +V+F  
Sbjct: 1438 TKISCGHFYTMATTDLKNVYSWGLGEHM------------KLGHGSDKNEATPRVVDFFI 1485

Query: 403  NVKALQVSCGFNHTGAL 419
                 ++ CG NHT  L
Sbjct: 1486 QKNVSKIVCGLNHTITL 1502



 Score =  121 bits (304), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 88/292 (30%), Positives = 140/292 (47%), Gaps = 8/292 (2%)

Query: 69   EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGL--KKEV 125
            EK ++K ++CG  H   ++E+G ++  G N  GQLG   +IG     P R+     K  +
Sbjct: 1217 EKRAIK-VSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPI 1275

Query: 126  VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
            + +  G  HS  +  D  +Y WG++  GQLG G K+      P  +E +SG   +  A G
Sbjct: 1276 IMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQ-NRPKIIEDISGQKIQAIAAG 1334

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
            F  ++ +   G++ S+G G  G+LGHG  S +   + +  E    +  +  G K+   A 
Sbjct: 1335 FAHTIVLKKSGELYSFGYGDQGQLGHG--SFVSKSIPTRIELNTIVGIQHGGGKITQIAC 1392

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
            GF HS    +NG VY +G     ++         RP LI  L    ++ CG ++T   T 
Sbjct: 1393 GFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVTKISCGHFYTMATTD 1452

Query: 306  GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
               +Y+WG  E+  LG GS D   +  RV   F +  V ++ CG  HT  ++
Sbjct: 1453 LKNVYSWGLGEHMKLGHGS-DKNEATPRVVDFFIQKNVSKIVCGLNHTITLT 1503



 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 117/432 (27%), Positives = 169/432 (39%), Gaps = 120/432 (27%)

Query: 43   WGNGDYGRLG----LGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGL 97
            WG    G+LG    +G +++   P     F  K  +  + CGG H++ +     VY+ G 
Sbjct: 1242 WGKNQSGQLGHGLDIGKIQTT--PKRLEFFRGKSPIIMVECGGEHSICVDSDYVVYSWGQ 1299

Query: 98   NDFGQLG-----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
            + FGQLG     +S+N    +E   ISG K  +  I+ G+ H+  +   GELY +G    
Sbjct: 1300 DKFGQLGHGTKSVSQNRPKIIED--ISGQK--IQAIAAGFAHTIVLKKSGELYSFGYGDQ 1355

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGI-----FTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            GQLG G   +K IP   ++  + GI        Q A GF  SV  +  G+V SWG G  G
Sbjct: 1356 GQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQG 1415

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGHG   SI           PRLI+ L+GV  KI+   F   A  D    VY +G    
Sbjct: 1416 QLGHGNYESIA---------RPRLIEALKGV-TKISCGHFYTMATTDLKN-VYSWGLGEH 1464

Query: 268  DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGEL---------------- 309
             K+      +   P ++         ++VCG  HT  LT  G+L                
Sbjct: 1465 MKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFID 1524

Query: 310  -------------------------------------YTWGSNENGCLGIGSIDVLHSPE 332
                                                 Y  G+ E+G LG+G         
Sbjct: 1525 LAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGG-------- 1576

Query: 333  RVQGPFSESPVD------------QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 379
             ++ PF + P+              +SCG   TA I S G +  WG+G            
Sbjct: 1577 DLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMITSNGALYVWGYG------------ 1624

Query: 380  SGGQLGHGNDVD 391
            + GQ+G+G   D
Sbjct: 1625 NFGQIGNGKTDD 1636



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 84/343 (24%), Positives = 126/343 (36%), Gaps = 76/343 (22%)

Query: 43   WGNGDYGRLGLGSLESRWRP-------VVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            +G GD G+LG GS  S+  P       +V        +  +ACG  H++  ++ G VY+ 
Sbjct: 1350 FGYGDQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSW 1409

Query: 96   GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            GL   GQLG   N      P  I  LK  V +IS G+ ++ A T    +Y WG   + +L
Sbjct: 1410 GLGKQGQLG-HGNYESIARPRLIEALKG-VTKISCGHFYTMATTDLKNVYSWGLGEHMKL 1467

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV----------------- 198
            G G    +    P  V+        +   G   ++ +T  G +                 
Sbjct: 1468 GHGSDKNEAT--PRVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDL 1525

Query: 199  --------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
                               G SGRLG          L   S+ +P +     G   K+  
Sbjct: 1526 APSTSNSSSSSSLTNDNNNGRSGRLG----------LNENSQVSP-IYACGAGEHGKLGL 1574

Query: 245  AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
             G L S   D+     I G  A++ +                     ++ CG   T ++T
Sbjct: 1575 GGDLKSPFFDKPIPTAIKGVNALNLI---------------------DISCGTDFTAMIT 1613

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
            S G LY WG    G +G G  D    P R+  P ++S  +Q S
Sbjct: 1614 SNGALYVWGYGNFGQIGNGKTDDAWVPIRI--PLTDSKANQSS 1654



 Score = 47.8 bits (112), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 20/101 (19%)

Query: 324  SIDVLHSPERVQGPF----SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
            SI +   PE +  P     +E    +VSCGW H A ISE G++ TW            G 
Sbjct: 1197 SIKLKPDPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTW------------GK 1244

Query: 379  SSGGQLGHGNDVDYIHPT---IVNFGENVKALQVSCGFNHT 416
            +  GQLGHG D+  I  T   +  F      + V CG  H+
Sbjct: 1245 NQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECGGEHS 1285


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 189/407 (46%), Gaps = 54/407 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
           +G  D G+LG G+   + RP      V  S F K         + A++CG  HT+ LT +
Sbjct: 15  FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE---VVQISTGYHHSSAITVDGELYM 146
           G VY+ G    GQLG  +    ++ P +I+  ++E   V  +S G  HS+A+T DG LYM
Sbjct: 72  GAVYSWGWGSMGQLGHGDLKSINV-PQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLYM 130

Query: 147 WGKNSNGQLGLGKK-AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTGGGKVLSWG 202
           WG+   GQLGL K+  A     P K   L G+  +   + + G   + A+T  G+V  WG
Sbjct: 131 WGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVWG 190

Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G SG+LG G        ++ +LG  R      P L++   G KV   A G  HSA + E
Sbjct: 191 RGDSGQLGIGSAWLKDTDDNGLLGVSR------PHLVEGFNGEKVVQVACGAFHSAAVTE 244

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            G VYI+G      +   + +  + P  +     +P +  V CGG+HT V+   G+ Y +
Sbjct: 245 QGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIP-ALRVSCGGWHTMVVAKSGDCYAF 303

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           G  E G LG+G       P  V+    ++ V Q +CG  HT  ++           S G 
Sbjct: 304 GRGEYGRLGLGDTKSRTRPHLVKALKGQT-VIQAACGGSHTLFVT-----------SDGI 351

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               G    G+LG  +      PT ++ G  +   QVS G  H+ AL
Sbjct: 352 AYVAGRPDHGRLGMTDMKPLSVPTRLDLGP-IPVRQVSAGGAHSMAL 397



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 156/353 (44%), Gaps = 49/353 (13%)

Query: 92  VYATGLNDFGQLGIS---------ENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVD 141
           V A G ND GQLG           +++  S  P ++ GL  +E+V +S G  H+ A+T  
Sbjct: 12  VVAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPKQLGGLLGEEIVAVSCGSRHTMALTAS 71

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS--GIFTKQAALGFEQSVAVTGGGKVL 199
           G +Y WG  S GQLG G    K I +P K+      G+     + G   S AVT  G + 
Sbjct: 72  GAVYSWGWGSMGQLGHGD--LKSINVPQKIAFFEQEGLKVDYVSCGGCHSAAVTNDGTLY 129

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAAGFLHSACIDE 255
            WG    G+LG  +E        +  E  P     LEGV     VK++  G  H+A +  
Sbjct: 130 MWGETHWGQLGLPKE------FEAAHESFPVKCPLLEGVADESVVKVSCGG-THTAALTN 182

Query: 256 NGRVYIFG-----DRAVDKMLFQEGNH-----ARRPSLISKLPYSE--EVVCGGYHTCVL 303
            GRVY++G        +     ++ +        RP L+      +  +V CG +H+  +
Sbjct: 183 LGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAV 242

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           T  G +Y WG  + G LG+G      +P+RV+  F + P  +VSCG  HT  +++     
Sbjct: 243 TEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEF-FDDIPALRVSCGGWHTMVVAKS---- 297

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                  G     G    G+LG G+      P +V   +    +Q +CG +HT
Sbjct: 298 -------GDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHT 343



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 129/281 (45%), Gaps = 30/281 (10%)

Query: 42  LWGNGDYGRLGLG-SLESRWR--PVVCSAFE---KHSLKALACGGAHTLFLTETGCVYAT 95
           +WG   +G+LGL    E+     PV C   E     S+  ++CGG HT  LT  G VY  
Sbjct: 130 MWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLGRVYVW 189

Query: 96  GLNDFGQLGI--------SEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
           G  D GQLGI         +N  +G S  P  + G   E VVQ++ G  HS+A+T  G +
Sbjct: 190 GRGDSGQLGIGSAWLKDTDDNGLLGVS-RPHLVEGFNGEKVVQVACGAFHSAAVTEQGHV 248

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y+WGK   G LG+G+ + +    P +VE    I   + + G   ++ V   G   ++G G
Sbjct: 249 YIWGKEDYGMLGVGQTSDQ--QTPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRG 306

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             GRLG G          + S   P L+K L+G  V  AA G  H+  +  +G  Y+ G 
Sbjct: 307 EYGRLGLGD---------TKSRTRPHLVKALKGQTVIQAACGGSHTLFVTSDGIAYVAGR 357

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
               ++   +      P+ +   P    +V  GG H+  LT
Sbjct: 358 PDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSMALT 398


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  E +V ++ G  HS A++  G+L+ WG  S+GQLGL     + + +P  ++ L+    
Sbjct: 81  LADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL-MTTEESVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRAQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G  HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T E    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+       V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKL-LRAQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G + SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADEHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L         P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  138 bits (348), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 109/347 (31%), Positives = 168/347 (48%), Gaps = 34/347 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           ++CG +H+ F+TE G ++  G N+ GQLG+    G   +P+ +  LK E  Q ++ G  H
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIK-GPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T  GE+   G NS+GQLGLG     +     +  C      K  + G   S A+T 
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            G++  WG   +G+LG G +S  L            L KEL  G  +   + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPKELNMGQSIHWVSCGYRHSALV 204

Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            ++G VY FG+ A  ++     Q  NH+  P  +  L    +V CGG HT  LT   ELY
Sbjct: 205 TDSGDVYSFGESADGRLGLSAHQLANHSY-PQRVESLHSVLQVACGGKHTLALTED-ELY 262

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
            +G  E G LG+G++  +       G F +  V  V+CG +H+A I++  +L        
Sbjct: 263 CFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITDSGLLY------- 315

Query: 371 GTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNH 415
            TF +  H   G+LGHG++   +   PT+         + V+CG +H
Sbjct: 316 -TFGDGRH---GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  128 bits (321), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 170/342 (49%), Gaps = 44/342 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + +TG V+      FG+  I+ N+     P R+  LK ++ V IS G  HS+ +T  G L
Sbjct: 7   IPDTGAVFT-----FGKSKIANNV-----PSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +++G N+ GQLGL  K     P+  KV  L G   +  A G + ++  T  G++L+ G  
Sbjct: 56  FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113

Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G+LG G  +  + F  LR   +Y P          +K+ +AG   SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           GD +  ++ F   +HA  P  ++       V CG  H+ ++T  G++Y++G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPKELNMGQSIHWVSCGYRHSALVTDSGDVYSFGESADGRLGL 223

Query: 323 GSIDVL-HS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
            +  +  HS P+RV+   S   V QV+CG KHT A++E ++  +G G             
Sbjct: 224 SAHQLANHSYPQRVESLHS---VLQVACGGKHTLALTEDELYCFGGG------------E 268

Query: 381 GGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 421
            GQLG G  V     P  V      +   V+CG  H+  + +
Sbjct: 269 FGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALITD 310



 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 103/353 (29%), Positives = 158/353 (44%), Gaps = 31/353 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           ++ +LK DI +    G       +   R F  ++G+ + G+LGL       +PV     +
Sbjct: 27  SRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVKVLK 84

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
               +++ACG  HTL  T  G + A G N  GQLG+   N   S + LR       +  +
Sbjct: 85  GERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLL 144

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G H S+A+T DG L++WG NS GQLG G  +  ++P     E   G      + G+  
Sbjct: 145 SAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----KELNMGQSIHWVSCGYRH 200

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G V S+G    GRLG       L   +  +   P+ ++ L  V +++A  G  
Sbjct: 201 SALVTDSGDVYSFGESADGRLG-------LSAHQLANHSYPQRVESLHSV-LQVACGG-K 251

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E+  +Y      FG   +  ++F     A  P  +          V CG  H+ 
Sbjct: 252 HTLALTED-ELYCFGGGEFGQLGLGTLVFV----ADSPVAVGHFRKGRVTHVTCGEQHSA 306

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKH 352
           ++T  G LYT+G   +G LG G  +  +  +P   Q  F E  V  V+CG  H
Sbjct: 307 LITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQ-RFFEYSVMTVACGSSH 358


>gi|159486867|ref|XP_001701458.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158271640|gb|EDO97455.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 591

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 179/403 (44%), Gaps = 78/403 (19%)

Query: 38  RFAALWGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R    +GN D+GRLGLG  +L S   P V  A  ++ L+ LA GGAHT+ +T  G V+  
Sbjct: 3   RLLVAFGNADHGRLGLGATTLSSVMTPRVNLALARYDLENLAAGGAHTVVVTRGGLVFTF 62

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLN  GQLG S     + EP  +  L + V  ++ G  H++ +T  G +Y +G N++GQL
Sbjct: 63  GLNTRGQLGHSAEADSAAEPGNVL-LPEPVAAVAAGDAHTACLTESGRVYTFGCNASGQL 121

Query: 156 GLGKKAAKVIP-------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           G+G+ A   IP        P  VE L+G      A G   S+AVT  G++ +WG G  GR
Sbjct: 122 GVGRDA---IPGGRSHSARPMLVEALTGQRVVSVAAGAAHSLAVTDSGRLYAWGLGDHGR 178

Query: 209 LGHGQESSILGFLRSTS------------------------------EYTPRLI--KELE 236
           LG G   S      S+                               E+ PR +    L 
Sbjct: 179 LGLGPPPSAASSSNSSCGSDGSSDSSSDRTSSSSSCSEGGGARSPWVEWLPRAVTTAALG 238

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG-----------NHARRPSL-- 283
           G K     AG   SAC+DE GRVY +G  A+ ++    G           +    P L  
Sbjct: 239 GSKPAEVFAGPATSACMDEAGRVYTWGFGALHQLGHGAGAAAGGGGRATPDDEWEPRLVD 298

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP----ERVQGPFS 339
           +S L  +  +  GG H     +   ++ WGS+ +   GIGS+ ++           GP  
Sbjct: 299 VSSLRRTRRLALGGAHALACRTDERVHVWGSDPS---GIGSLGMMPGSGLGLGPAPGPLP 355

Query: 340 ESPV------------DQVSCGWKHTAAI-SEGKILTWGWGGS 369
            S V              V+ G  H+A + S+GK+  WGWGG+
Sbjct: 356 GSAVVIPAPTIFRWWFTDVAAGLAHSAGVSSDGKLFAWGWGGA 398


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 193/410 (47%), Gaps = 58/410 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRP------VVCSAFEKH-------SLKALACGGAHTLFLTET 89
           +G  D G+LG G+   + RP      V  S F +         + A++CG  HT+ LT +
Sbjct: 11  FGCNDDGQLGTGA---KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSS 67

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
           G VY+ G    GQLG   ++    EP +I+  ++E ++   IS G  HS+A+T DG LY+
Sbjct: 68  GAVYSWGWGSMGQLG-HGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYV 126

Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           WG++  GQLGL K+   A + +P+   + E  +G    + + G   + A+T  G+V  WG
Sbjct: 127 WGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWG 186

Query: 203 AGGSGRLGHG-------QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G SG+LG G       +  S++G  R      P L+K   G KV   A G  HSA + E
Sbjct: 187 RGDSGQLGIGSVWMKDPENESLMGASR------PHLLKAFNGEKVVQVACGAFHSAAVTE 240

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE-----VVCGGYHTCVLTSGGELY 310
            G VY++G      +   + +  + P    +L Y ++     V CGG+HT V+   G+ Y
Sbjct: 241 QGHVYVWGKEDYGMLGVGQSSDQQIP---KRLEYFDDIPVLRVSCGGWHTVVVAKSGDCY 297

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
            +G  E G LG+G       P  V+       V Q +CG  HT  ++           S 
Sbjct: 298 AFGRGEYGRLGLGDTKSRTRPHLVKA-LKGKTVIQAACGGSHTLFVT-----------SD 345

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           GT    G    G+LG  +      PT ++ G  +   Q S G  H+ AL+
Sbjct: 346 GTAYVAGRPDHGRLGLADMKALGVPTRLDLGP-IPVRQFSAGGAHSVALM 394



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 115/240 (47%), Gaps = 31/240 (12%)

Query: 42  LWGNGDYGRLGL-----GSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVY 93
           +WG   +G+LGL      + ES   PV C   E     ++  ++CGG HT  LT  G VY
Sbjct: 126 VWGESHWGQLGLPKEYEAAHESL--PVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVY 183

Query: 94  ATGLNDFGQLGI---------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGE 143
             G  D GQLGI         +E++  +  P  +     E VVQ++ G  HS+A+T  G 
Sbjct: 184 VWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGH 243

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y+WGK   G LG+G+ + +   IP ++E    I   + + G   +V V   G   ++G 
Sbjct: 244 VYVWGKEDYGMLGVGQSSDQ--QIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGR 301

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLG G          + S   P L+K L+G  V  AA G  H+  +  +G  Y+ G
Sbjct: 302 GEYGRLGLGD---------TKSRTRPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAG 352



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG  DYG LG+G    +  P     F+   +  ++CGG HT+ + ++G  YA G  ++G
Sbjct: 246 VWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYG 305

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG+ +    +  P  +  LK K V+Q + G  H+  +T DG  Y+ G+  +G+LGL   
Sbjct: 306 RLGLGDTKSRT-RPHLVKALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPDHGRLGLAD- 363

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             K + +PT+++ L  I  +Q + G   SVA+
Sbjct: 364 -MKALGVPTRLD-LGPIPVRQFSAGGAHSVAL 393



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 77/156 (49%), Gaps = 30/156 (19%)

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I  LP  E++V   CG  HT  LTS G +Y+WG    G LG G + +++ P+++   
Sbjct: 40  PQQIGNLP-DEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIA-- 96

Query: 338 FSESP---VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           F E     VD +SCG  H+AA+++   L + WG SH           GQLG   + +  H
Sbjct: 97  FFEQERLEVDYISCGGCHSAAVTKDGTL-YVWGESHW----------GQLGLPKEYEAAH 145

Query: 395 PTIV--------NFGENVKALQVSCGFNHTGALLEY 422
            ++           GE +  ++VSCG  HT AL  +
Sbjct: 146 ESLPVKCPMPEGEAGETI--VKVSCGGTHTAALTSF 179


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 185/397 (46%), Gaps = 45/397 (11%)

Query: 44  GNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           G+G  GRLGL    +R     P+     +   +K+LACGG H L L+  G VY+ G ND 
Sbjct: 10  GHGAGGRLGLNDERARTAFTGPL--GTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYNDS 67

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            Q G         EP  I  L+  +VVQI+ G  HS A+T   E++ WG+  +GQLG G 
Sbjct: 68  RQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGD 127

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +   +  P  V+ L G   K    G+E + A+TG GKVL +G+  SG+LG+G     +G
Sbjct: 128 VSD--VWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIG 185

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNH 277
                + Y P  +K L    +  A  G   S  +   G++Y  G  A  ++   F+E   
Sbjct: 186 ----GNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVES 241

Query: 278 ARRP------SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              P       +  K  + + V CG  H+  L+  G +Y+WGS  N  LG G  +   +P
Sbjct: 242 LNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTP 301

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           + V       P   VS G  H+AA+S  G+I TW            G +  GQLG G ++
Sbjct: 302 KMV-AMLEADPCVSVSAGGYHSAAVSATGRIYTW------------GRNFVGQLGTGQNI 348

Query: 391 -----DYIH--PTIVNFGENVK----ALQVSCGFNHT 416
                D++   PT V    +V     A++V CG  HT
Sbjct: 349 DDHSADHVQRLPTRVILKGSVDSSEMAMRVGCGQCHT 385



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 124/255 (48%), Gaps = 18/255 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +G+LG G +   W P +    +   +K++ CG  +T  +T TG V   G    G+
Sbjct: 115 WGRGLHGQLGHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGK 174

Query: 103 LG---ISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG   +   IG ++  P+++  L K  ++Q + G + S  ++  G+LY  G  +NGQLG+
Sbjct: 175 LGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGI 234

Query: 158 GKKAAKVIPIP---TKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
             +  + + +P   T  E    G+F K  + G   S+A++  G V SWG+G +  LGHG 
Sbjct: 235 PFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGG 294

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    +   +TP+++  LE       +AG  HSA +   GR+Y +G   V ++   
Sbjct: 295 ---------TEDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTG 345

Query: 274 EGNHARRPSLISKLP 288
           +         + +LP
Sbjct: 346 QNIDDHSADHVQRLP 360



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           + + CGG H  +L+  G++Y+WG N++   G G  D+     R         V Q++ G 
Sbjct: 41  KSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGE 100

Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H+ A+++  ++ TWG G              GQLGHG+  D   P +V   +      +
Sbjct: 101 DHSVALTDRSEVFTWGRG------------LHGQLGHGDVSDVWFPFLVKGLQGKGIKSI 148

Query: 410 SCGFNHTGAL 419
            CG+ +T A+
Sbjct: 149 GCGYENTFAI 158


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 171/337 (50%), Gaps = 23/337 (6%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLND 99
           WG    G+LG+G  E  +   P +    E  S ++ ++CG  HT FL + G VY  G N+
Sbjct: 4   WGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNE 63

Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FGQLG  ++      P  +  ++   + +++ G  H+ A++  G ++ WG NS GQ+GLG
Sbjct: 64  FGQLGQEKS---HTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQIGLG 120

Query: 159 KKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            K   KV  IP  ++ L+ +   Q A G   S+A+T  G +  WG   SG+LG G+  S 
Sbjct: 121 SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHS- 179

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S SE  P L   L GV   + +AG  HS  +  +G ++ +G     ++   +   
Sbjct: 180 -----SMSEPAPVL--SLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTD 232

Query: 278 ARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              P+L+  L  S+    V CG  HT VLTS G ++T+G   +G LG  S    ++P +V
Sbjct: 233 RPLPTLLKSL-RSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKV 291

Query: 335 QGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
                 S V Q++CG  HT A+  S G++ T+G GG 
Sbjct: 292 -FELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGD 327



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 153/304 (50%), Gaps = 18/304 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ ++G+LG    +S   P    A E  ++  + CG AHT+ +++ G V+A G N +GQ+
Sbjct: 60  GSNEFGQLG--QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYGQI 117

Query: 104 GISENIGYSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+   +   ++  P  + GL K  VVQI+ G +HS A+T+ G L+ WG NS+GQLG+GK 
Sbjct: 118 GLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKT 177

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            +  +  P  V  L+G+     + G   S A++  G +  WG    G+LG          
Sbjct: 178 HSS-MSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHD------- 229

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P L+K L    V   + G  H+A +  +G V+ FG     ++     +H   
Sbjct: 230 --TTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNHHEYT 287

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L  S   ++ CG  HT  L  S G +YT+G   +G LG+G  +  +SP   +GP
Sbjct: 288 PRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGP 347

Query: 338 FSES 341
           +  S
Sbjct: 348 WLRS 351



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 38/287 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++ WGK S GQLG+G+   + I  P  +E L      ++ + G+  +  +   G V + G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +   G+LG           +  S   P  +  +E   +     G  H+  + + G V+ +
Sbjct: 61  SNEFGQLG-----------QEKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAW 109

Query: 263 GDRAVDKMLFQEGNHARR-----PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           GD +  ++    G+  +      P ++  L      ++ CG  H+  LT  G L+ WG N
Sbjct: 110 GDNSYGQIGL--GSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGDN 167

Query: 316 ENGCLGIGSIDVLHSPERVQGP---FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
            +G LGIG     HS      P    +  P   +S G  H+ A+S    L +GW      
Sbjct: 168 SSGQLGIGKT---HSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGAL-FGW------ 217

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               G +  GQLG  +  D   PT++    +     VSCG  HT  L
Sbjct: 218 ----GKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVL 260



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 4/172 (2%)

Query: 43  WGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG+G   S    P    +        ++ GGAH+  L+ +G ++  G N++G
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ +     L  L  S   + V  +S G  H++ +T DG ++ +G  ++GQLG     
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSNH 283

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
            +    P KV  L G    Q A G   ++A V   G+V ++G GG G+LG G
Sbjct: 284 HEY--TPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLG 333


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  H+ A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLGL-MTTEDAVAVPRVIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G   S+A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 160/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   ++A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PR+I++L    +   + G  HS  +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  H+  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHNLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P +I KL      +V CG +H+  L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 181/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPL-RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E+ G   EP+  ++G  + +V ++ G  HS A++  G+++ WG  S+GQLGL  
Sbjct: 64  GQLG-HESEGSKPEPIGALAG--QHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE 290

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG  HT A   S G I  +G G            + GQLG G+  +   
Sbjct: 291 -LMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTGHTCNVKC 337

Query: 395 PTIV 398
           P+ V
Sbjct: 338 PSPV 341



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 140/292 (47%), Gaps = 16/292 (5%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG  S  S+  P+   A     +  +ACG +H++ L++ G V++ G    GQLG++  
Sbjct: 64  GQLGHESEGSKPEPI--GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTI 121

Query: 109 IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
                 P  I  L ++ ++QIS G  H  A+  DG+ + WG+NS GQLGLGK+       
Sbjct: 122 EDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS- 180

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +V+ L GI   Q A G   S A++  G V  WG   SG+LG   E             
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRE 231

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +P  +K L   KV   + G  H+A + ++G V+ FG  +  ++     N    P  + +L
Sbjct: 232 SPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL 291

Query: 288 PYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             SE  ++ CG +HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 292 MGSEVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 33/332 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P  +  L+G      A G   SVA++  G+V SWGAG  G+LG   
Sbjct: 65  QLGHESEGSK----PEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           SP  V+   S+  V  +SCG +HTA +++ G + T+G G            S GQLGH +
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDS 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             D ++P  V      +  Q++CG +HT A +
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 122/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+V+ +G  +
Sbjct: 64  GQLGHESEGS-----------KPEPIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      ++ CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             +S 
Sbjct: 173 KECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWG------------KNSS 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 103 EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 159

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 160 LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 218

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 219 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 270

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 271 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 329

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 330 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 388

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 389 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 420



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 88  LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 146

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 147 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 196

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 197 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 252

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 253 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 311

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 312 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 358

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 359 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 389



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 131/308 (42%), Gaps = 29/308 (9%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           R++ L   V Q    +  +S +     +  WG  S GQ G+      ++  P     +S 
Sbjct: 53  RVTCLGDSVAQWIRLWTLASGLDSIRTMLCWGYWSLGQPGISTNLQGIVAEPQVCGFISD 112

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
              K+ A G   SV +   G+V + G    G+LGH +E +            P  I  L 
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHEREGN-----------KPEQIGALA 161

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EV 293
              +   A G  HS  + + G+++ +G  +  ++ L    +    P LI KL      +V
Sbjct: 162 DQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQV 221

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKH 352
            CG +H   L + G+ +TWG N +G LG+G       SP+RV+      P+ QV+ G  H
Sbjct: 222 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAH 280

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           + A+S  G +  W            G ++ GQLG  ++ D   P  V      K + +SC
Sbjct: 281 SFALSLSGAVFGW------------GMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISC 328

Query: 412 GFNHTGAL 419
           G  HT  L
Sbjct: 329 GEEHTAVL 336



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 293 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 352

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 353 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 411

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 412 CNVKCPSPVK 421


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 115/330 (34%), Positives = 168/330 (50%), Gaps = 35/330 (10%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 2736

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 2737 GKLGHG-NSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 2795

Query: 160  KAAKVIPIPTKVECLSGIFTKQA-------ALGFEQSVAV-TGGGKVLSWGAGGSGRLGH 211
             + K   +P +V  L G    QA       A G   ++AV T G  V ++G G  G+LG 
Sbjct: 2796 TSNK--KLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGKLGL 2853

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKM 270
            G          ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +   
Sbjct: 2854 GN---------STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLP 2904

Query: 271  LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              +  NH  RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +
Sbjct: 2905 EGRARNH-NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHV 2963

Query: 329  HSPERV---QGPFSESPVDQVSCGWKHTAA 355
              P  V   QG      + Q+S G  H+AA
Sbjct: 2964 REPTLVTVLQG----KNIRQISAGRCHSAA 2989



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 126/254 (49%), Gaps = 21/254 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 2731 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 2790

Query: 103  LGISENIGYSLEPLRISGLK--------KEVVQISTGYHHSSAITVDGEL-YMWGKNSNG 153
            LG+       L P R++ L+         +   ++ G +H+ A++ DG + + +G    G
Sbjct: 2791 LGLGNTSNKKL-PERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYG 2849

Query: 154  QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +LGLG   AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G 
Sbjct: 2850 KLGLGNSTAK--SSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG- 2906

Query: 214  ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++   
Sbjct: 2907 --------RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLG 2958

Query: 274  EGNHARRPSLISKL 287
              NH R P+L++ L
Sbjct: 2959 HTNHVREPTLVTVL 2972



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 173/394 (43%), Gaps = 47/394 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 2626 LWGAGRHGQLAEAG-RNVMVPAAAPSFSQ--AQQVICGQNCTFVIQANGTVLACGEGSYG 2682

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 2683 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 2741

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +  P   ++E L G    Q + GF+ S  VT  GK+ ++G G  GRLG G  S+ 
Sbjct: 2742 GNSDRQRRP--RQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSN- 2798

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIA-------AAGFLHSACIDENGR-VYIFGDRAVDK 269
                    +  P  +  LEG ++  A       A G  H+  +  +G  V+ FGD    K
Sbjct: 2799 --------KKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFGDGDYGK 2850

Query: 270  MLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            +          P  +  L     ++V CG   +  LT  G +YT+G +    L  G    
Sbjct: 2851 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARN 2910

Query: 328  LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
             + P++V    +   ++ V+ G +HT A+ S G +  WG             +S GQLG 
Sbjct: 2911 HNRPQQVPV-LAGVVIEDVAVGAEHTLALASTGDVYAWG------------SNSEGQLGL 2957

Query: 387  GNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
            G+      PT+V    G+N++  Q+S G  H+ A
Sbjct: 2958 GHTNHVREPTLVTVLQGKNIR--QISAGRCHSAA 2989



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 140/315 (44%), Gaps = 39/315 (12%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++++WG   +GQL    +A + + +P      S  
Sbjct: 2598 INGMDEQIMSWATSRPEDWHLGGKCDVFLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 2653

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 2654 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 2703

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 2704 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 2762

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ------ 345
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PERV        + Q      
Sbjct: 2763 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQAWNKSY 2821

Query: 346  -VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
             V+CG  HT A+S    + W +G        DG    G+LG GN      P  V+    +
Sbjct: 2822 SVACGLNHTLAVSTDGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGI 2871

Query: 405  KALQVSCGFNHTGAL 419
               +V+CG   + AL
Sbjct: 2872 GIKKVACGTQFSVAL 2886


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 172/383 (44%), Gaps = 36/383 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV  S      + A+A G +HT  LT +G V+  G N FGQ
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGLAS-GVTAIAAGDSHTCALTSSGGVWCWGYNFFGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G +  WG+N +GQLG G    
Sbjct: 354 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTT 412

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      +SG+ +   A+  G + + A T  G V+ WG   SG+LG G        
Sbjct: 413 RSTPVA-----VSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGT------- 460

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T   TP  +  L G  V   AAG  H+  +  +G V+ +G  +  ++          
Sbjct: 461 --TTDRSTPVAVSGL-GSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGT 517

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +S LP     +  GG HTC LTS G +  WG+N +G LG G+     +P  V G   
Sbjct: 518 PVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGL-- 575

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S V  ++ G  HT A+ S G +  W            G +S GQLG G       P  V
Sbjct: 576 PSGVMAIAAGDLHTCALTSSGGVWCW------------GANSSGQLGDGTTTARSTPVAV 623

Query: 399 NFGENVKALQVSCGFNHTGALLE 421
           + G       ++ G  HT AL  
Sbjct: 624 S-GLPSGVTAIAAGSFHTCALTS 645



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 160/352 (45%), Gaps = 33/352 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + A+A GGAHT  LT +G V   G N FGQLG       S  P+ +SGL   V  I+ GY
Sbjct: 69  VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRS-TPVAVSGLTSGVTAIAAGY 127

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+ A+   G +  WG N +GQLG G    +  P+   V  L+   T  AA G + + A 
Sbjct: 128 AHTCALMSSGGVMCWGDNWSGQLGDGTTTDRSTPV--AVSGLASGVTAIAA-GDDHTCAR 184

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G V+ WG   SG+LG G          +T   TP  +  L G  V   AAG  H+  
Sbjct: 185 TSSGGVMCWGDNWSGQLGDGT---------TTDRSTPVAVSGL-GSGVTAIAAGGSHTCA 234

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYT 311
           +  +G V+ +GD    ++          P  +S L      +  GG+HTC  TS G +  
Sbjct: 235 LMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVTAIAAGGFHTCARTSSGGVMC 294

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           WG+N +G LG G+     +P  V G    S V  ++ G  HT A+ S G +  WG    +
Sbjct: 295 WGANWSGQLGDGTTTARSTPVAVSGL--ASGVTAIAAGDSHTCALTSSGGVWCWG----Y 348

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 421
             F        GQLG G   D   P  V+  G  V A+    G  HT AL+ 
Sbjct: 349 NFF--------GQLGDGTTTDRSTPVAVSGLGSGVTAIAA--GDFHTCALMS 390



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 165/361 (45%), Gaps = 35/361 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV  S      + A+A G  HT   T +G V   G N  GQ
Sbjct: 397 WGRNKDGQLGDGTTTTRSTPVAVSGLVS-GVTAIAAGDDHTCARTSSGGVMCWGDNWSGQ 455

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG+NS+GQLG G    
Sbjct: 456 LGDGTTTDRS-TPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTD 514

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      +SG+ ++  A+  G   + A+T  G V+ WGA  SG+LG G        
Sbjct: 515 RGTPVA-----VSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGT------- 562

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T+  TP  +  L    + I AAG LH+  +  +G V+ +G  +  ++          
Sbjct: 563 --TTARSTPVAVSGLPSGVMAI-AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARST 619

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +S LP     +  G +HTC LTS G ++ WG+N +G LG GS     +P  V G   
Sbjct: 620 PVAVSGLPSGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL-- 677

Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S V  ++ G  HT A    G +  W              +  GQLG G+  D   P  V
Sbjct: 678 PSGVTAIAAGRFHTCARTGSGGVWCW------------ASNRYGQLGDGSYTDSSTPVAV 725

Query: 399 N 399
           +
Sbjct: 726 S 726



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 170/431 (39%), Gaps = 81/431 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+   R  PV  S      + A+A G AHT  L  +G V   G N  GQ
Sbjct: 91  WGRNGFGQLGDGTTTDRSTPVAVSGLTS-GVTAIAAGYAHTCALMSSGGVMCWGDNWSGQ 149

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A T  G +  WG N +GQLG G    
Sbjct: 150 LGDGTTTDRS-TPVAVSGLASGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTD 208

Query: 163 KVIPI-------------------------------------------------PTKVEC 173
           +  P+                                                 P  V  
Sbjct: 209 RSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSG 268

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+   T  AA GF  + A T  G V+ WGA  SG+LG G          +T+  TP  + 
Sbjct: 269 LASGVTAIAAGGF-HTCARTSSGGVMCWGANWSGQLGDGT---------TTARSTPVAVS 318

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EE 292
            L    V   AAG  H+  +  +G V+ +G     ++          P  +S L      
Sbjct: 319 GLA-SGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTTDRSTPVAVSGLGSGVTA 377

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           +  G +HTC L S G +  WG N++G LG G+     +P  V G  S   V  ++ G  H
Sbjct: 378 IAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTRSTPVAVSGLVSG--VTAIAAGDDH 435

Query: 353 TAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVS 410
           T A  S G ++ WG          D  S  GQLG G   D   P  V+  G  V A+   
Sbjct: 436 TCARTSSGGVMCWG----------DNWS--GQLGDGTTTDRSTPVAVSGLGSGVTAIAA- 482

Query: 411 CGFNHTGALLE 421
            G +HT AL+ 
Sbjct: 483 -GGSHTCALMS 492



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 128/284 (45%), Gaps = 16/284 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  S      + A+A GG HT  LT +G V   G N  GQ
Sbjct: 499 WGRNSSGQLGDGTTTDRGTPVAVSGLPSE-VTAIASGGVHTCALTSSGGVMCWGANWSGQ 557

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V+ I+ G  H+ A+T  G ++ WG NS+GQLG G   A
Sbjct: 558 LGDGTTTARS-TPVAVSGLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTA 616

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA  F  + A+T  G V  WGA  SG+LG G          
Sbjct: 617 RSTPV--AVSGLPSGVTAIAAGSF-HTCALTSSGGVWCWGANWSGQLGDGSY-------- 665

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L    V   AAG  H+     +G V+ +      ++       +  P 
Sbjct: 666 -TDSSTPVAVSGLP-SGVTAIAAGRFHTCARTGSGGVWCWASNRYGQLGDGSYTDSSTPV 723

Query: 283 LISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSI 325
            +S L      +  G  HTC  TS G +  WG+N +G LG G +
Sbjct: 724 AVSGLVSGVTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDGRL 767



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 60/136 (44%), Gaps = 16/136 (11%)

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           S  S L     +  GG HTC LTS G +  WG N  G LG G+     +P  V G    S
Sbjct: 61  SSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGL--TS 118

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  ++ G+ HT A+ S G ++ WG          D  S  GQLG G   D   P  V+ 
Sbjct: 119 GVTAIAAGYAHTCALMSSGGVMCWG----------DNWS--GQLGDGTTTDRSTPVAVS- 165

Query: 401 GENVKALQVSCGFNHT 416
           G       ++ G +HT
Sbjct: 166 GLASGVTAIAAGDDHT 181


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 36/357 (10%)

Query: 43  WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG G  G LGL        +     +P     F   +++ +ACG  HTL L   G VY+ 
Sbjct: 50  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 109

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G NDFGQLG   ++   LE  +++ L   E+  ++ G  HS A++  G+++ WG N NGQ
Sbjct: 110 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 166

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +    +  P  ++ L+ +   Q A G    +A+   G++ SWG   SG+LG G++
Sbjct: 167 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 225

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S       + +E  PR +  L GV + + A G +HS  +  +G V+++G  +  ++   +
Sbjct: 226 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 278

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 P+++  L     + V CG  HT  LT+ G ++T+G+   G LG G + V  +  
Sbjct: 279 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG-VKVNEAVP 337

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           R       + + Q+SCG  HT A +   G++  +G G S            GQLG+G
Sbjct: 338 RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS------------GQLGNG 382



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D+G+LG      +   V  +A   H ++A+ACG AH+L L++ G V++ G N  GQL
Sbjct: 110 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 167

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G        L P  I  L    +VQI+ G  H  A+  +GEL+ WG N++GQLGLG+ + 
Sbjct: 168 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 227

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V  L G+     A G   SV +T  G V  WG    G+LG   +   L    
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 284

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P ++K L   ++K    G  H+A +  +G V+ FG     ++      +   P 
Sbjct: 285 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 338

Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT       G LY +G   +G LG G+++    P  V G
Sbjct: 339 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 395



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 35/287 (12%)

Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           LY WG   NG+LGL     G      +  P +V        ++ A G + ++ +   G V
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S GA   G+LG  +       +R   +     +  L   +++  A G  HS  + + G+
Sbjct: 107 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 155

Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G +R        E     RP +I KL   +  ++ CG  H   L + GEL++WG N
Sbjct: 156 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215

Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
            +G LG+G  S      P RV       P+  V+CG  H+  ++  G +  WG       
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVSH-LVGVPLALVACGAMHSVGLTPSGTVFVWG------- 267

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 +S GQLG  +  D +HPT++    + +   V CG NHT AL
Sbjct: 268 -----RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 309



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGL     R  P V        +K + CG  HT  LT  G V+  G   +G
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 324

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           QLG    +  ++    +  +   + Q+S G  H+ A     G LY++G   +GQLG G  
Sbjct: 325 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 384

Query: 161 AAKVIPI 167
            +  +P+
Sbjct: 385 ESSALPV 391


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 178/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +     +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG  HT A   S G I  +G G            + GQLG G+  +   
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTGHTCNVKC 337

Query: 395 PTIV 398
           P+ V
Sbjct: 338 PSPV 341



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 159/332 (47%), Gaps = 33/332 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + +GQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P ++  L+G      A G   SVA++  G++ SWGAG  G+LG   
Sbjct: 65  QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           SP  V+   S+  V  +SCG +HTA +++ G + T+G G            S GQLGH +
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDS 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             D ++P  V      +  Q++CG +HT A +
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 122/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHDCEGS-----------KPEQIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             +S 
Sbjct: 173 KECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWG------------KNSS 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 172/348 (49%), Gaps = 42/348 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV         + A+A G AH+L +   G V+A G N  GQ
Sbjct: 172 WGSNASGQLGEGTTSNRPEPVQVQGLSG--VVAVAAGSAHSLAVRSDGTVWAWGANASGQ 229

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV ++ G+HHS A+  DG ++ WG+N + QLG   K +
Sbjct: 230 LGDGTTTDR-LVPVQVQGLSG-VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLG---KGS 284

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             + +P +V+ LS +     A G   S+AV   G V + G+  +G+LG G          
Sbjct: 285 MRLLVPAQVQGLSAVVA--VAAGDTHSLAVGSDGTVWAVGSNNNGQLGDG---------- 332

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            T+ Y    +  L GV V +AA  + HS  +  +G V+ +G  +  ++   +G    R  
Sbjct: 333 -TTTYRLVPVPVLSGV-VSVAANDY-HSLAVRSDGTVWAWGYNSTGQL--GDGTTTTRLV 387

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     VV GGYH+  + S G  + WGSN  G LG GS   L  P RVQ     
Sbjct: 388 PVQVSGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQ---QL 444

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           S V  V+ G  H+ A+ S+G + TW            G++S GQLG+G
Sbjct: 445 SGVGAVASGSSHSLALRSDGTVWTW------------GYNSFGQLGNG 480



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 165/358 (46%), Gaps = 36/358 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+      PV         + A+  G +H+L +   G V+A G N  GQ
Sbjct: 20  WGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNASGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S  P+++ GL   V+ ++ G  H  A+  DG ++ WG NS+GQ G G    
Sbjct: 80  LGDETTISRS-TPVQVLGLSG-VLFVAAGSSHVLALRYDGTVWAWGSNSSGQRGDGTTNN 137

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+  + + LSG+     A G   S+AV   G   +WG+  SG+LG G  S       
Sbjct: 138 RALPV--QAQGLSGVMA--VAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTS------- 186

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
             +   P  ++ L GV     AAG  HS  +  +G V+ +G  A  ++   +G    R  
Sbjct: 187 --NRPEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQL--GDGTTTDRLV 240

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     V  G +H+  + + G ++ WG N++  LG GS+ +L  P +VQG    
Sbjct: 241 PVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMRLL-VPAQVQG---L 296

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           S V  V+ G  H+ A+           GS GT    G ++ GQLG G     + P  V
Sbjct: 297 SAVVAVAAGDTHSLAV-----------GSDGTVWAVGSNNNGQLGDGTTTYRLVPVPV 343



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 161/358 (44%), Gaps = 38/358 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG  +  SR  PV         +  +A G +H L L   G V+A G N  GQ
Sbjct: 72  WGSNASGQLGDETTISRSTPVQVLGLSG--VLFVAAGSSHVLALRYDGTVWAWGSNSSGQ 129

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G       +L P++  GL   V+ ++ G +HS A+  DG  + WG N++GQLG G  + 
Sbjct: 130 RGDGTTNNRAL-PVQAQGLSG-VMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSN 187

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V+ LSG+     A G   S+AV   G V +WGA  SG+LG G          
Sbjct: 188 R--PEPVQVQGLSGVVA--VAAGSAHSLAVRSDGTVWAWGANASGQLGDGT--------- 234

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  ++ L GV     AAG  HS  +  +G V+ +G R     L +       P+
Sbjct: 235 TTDRLVPVQVQGLSGVVA--VAAGHHHSLAVRNDGTVWGWG-RNDSNQLGKGSMRLLVPA 291

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + S G ++  GSN NG LG G+      P  V      S 
Sbjct: 292 QVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTTYRLVPVPVL-----SG 346

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           V  V+    H+ A+ S+G +  WG            ++S GQLG G     + P  V+
Sbjct: 347 VVSVAANDYHSLAVRSDGTVWAWG------------YNSTGQLGDGTTTTRLVPVQVS 392



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 27/296 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
           +A G +H+L L   G V+A G N  GQLG        +  P+++ GL  EVV +  G  H
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLS-EVVAVDAGSSH 59

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N++GQLG     ++  P+  +V  LSG+     A G    +A+  
Sbjct: 60  SLAVRSDGTVWAWGSNASGQLGDETTISRSTPV--QVLGLSGVLF--VAAGSSHVLALRY 115

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG+  SG+ G G          + +   P   + L GV     AAG  HS  + 
Sbjct: 116 DGTVWAWGSNSSGQRGDGT---------TNNRALPVQAQGLSGVMA--VAAGDNHSLAVR 164

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            +G  + +G  A  ++   EG  + RP    +  L     V  G  H+  + S G ++ W
Sbjct: 165 SDGSAWAWGSNASGQL--GEGTTSNRPEPVQVQGLSGVVAVAAGSAHSLAVRSDGTVWAW 222

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           G+N +G LG G+      P +VQG    S V  V+ G  H+ A+ ++G +  WGWG
Sbjct: 223 GANASGQLGDGTTTDRLVPVQVQG---LSGVVAVAAGHHHSLAVRNDGTV--WGWG 273



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 135/293 (46%), Gaps = 31/293 (10%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           ++ G  HS A+  DG ++ WG NS+GQLG G      +P+P +V+ LS +    A  G  
Sbjct: 1   MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDA--GSS 58

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            S+AV   G V +WG+  SG+L  G E++I       S  TP  +  L G  V   AAG 
Sbjct: 59  HSLAVRSDGTVWAWGSNASGQL--GDETTI-------SRSTPVQVLGLSG--VLFVAAGS 107

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            H   +  +G V+ +G  +  +      N+   P     L     V  G  H+  + S G
Sbjct: 108 SHVLALRYDGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDG 167

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW 366
             + WGSN +G LG G+      P +VQG    S V  V+ G  H+ A+ S+G +  W  
Sbjct: 168 SAWAWGSNASGQLGEGTTSNRPEPVQVQG---LSGVVAVAAGSAHSLAVRSDGTVWAW-- 222

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                     G ++ GQLG G   D + P  V     V A  V+ G +H+ A+
Sbjct: 223 ----------GANASGQLGDGTTTDRLVPVQVQGLSGVVA--VAAGHHHSLAV 263



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ + G+LG G+   R  PV         + ++A    H+L +   G V+A G N  GQL
Sbjct: 322 GSNNNGQLGDGTTTYRLVPVPV----LSGVVSVAANDYHSLAVRSDGTVWAWGYNSTGQL 377

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G        L P+++SGL  EVV +  G +HS A+  DG  + WG N+ GQLG G     
Sbjct: 378 GDGTTT-TRLVPVQVSGLS-EVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGST--T 433

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            +P+P +V+ LSG+     A G   S+A+   G V +WG    G+LG+G   +    +RS
Sbjct: 434 YLPVPVRVQQLSGV--GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGPPLNTATVIRS 491


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 171/361 (47%), Gaps = 45/361 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G  G G+  +R  PV           A+A G  H+L     G V+A G ND GQ
Sbjct: 370 WGSNFSGERGEGTTNNRASPVQVQGLGGG--VAVAAGFNHSLAARSDGSVWAWGSNDSGQ 427

Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   + N   S  P+++ GL   VV ++ G+ HS A+  DG ++ WG N+ GQLG G  
Sbjct: 428 LGDGTTRN---STSPVQVQGLSG-VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTT 483

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +++P    V+ LSG+     A G   S+AV   G V +WG+   G+LG G  S+ L  
Sbjct: 484 TNRLVP----VQVLSGVVA--VAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRL-- 535

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P  ++ L GV     AAG  HS  +  +G V+ +G  +  ++   +G  + R
Sbjct: 536 -------VPVQVQGLSGVAA--VAAGSFHSLAVHSDGSVWAWGSNSSGEL--GDGTTSNR 584

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +  L     V  GG+H+ V+ S G ++TWGSN  G LG G+      P +VQG  
Sbjct: 585 LVPGRVPGLSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG-- 642

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             S V  V  G  H+ A+ S+G + TW            G++S GQLG G       P  
Sbjct: 643 -LSGVVAVDAGNSHSLAVRSDGTVWTW------------GYNSYGQLGDGTTTRRSVPVQ 689

Query: 398 V 398
           V
Sbjct: 690 V 690



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 176/378 (46%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + ++A G +++L +   G V+A G N  GQ
Sbjct: 120 WGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQ 177

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV ++ G  HS A+  DG ++ WG NS+GQLG G K  
Sbjct: 178 LG-DGTTSNRLVPVQVPGLSG-VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKIN 235

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V  LSG+    A      S+AV   G V +WGA   G+LG G +S  L    
Sbjct: 236 RLVPV--QVPGLSGVVAVAAG--AAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRL---- 287

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV    +  G  HS  +  +G V+ +G  +  ++          P 
Sbjct: 288 -----VPVRVQGLSGVVA--SDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPV 340

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + S G ++ WGSN +G  G G+ +   SP +VQG      
Sbjct: 341 QVRGLSGGMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQGLGGGV- 399

Query: 343 VDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
              V+ G+ H+ AA S+G +  WG        S D     GQLG G   +   P  V   
Sbjct: 400 --AVAAGFNHSLAARSDGSVWAWG--------SND----SGQLGDGTTRNSTSPVQVQGL 445

Query: 402 ENVKALQVSCGFNHTGAL 419
             V A  V+ GF+H+ AL
Sbjct: 446 SGVVA--VAAGFDHSLAL 461



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 161/333 (48%), Gaps = 37/333 (11%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           +  S   LA G +++L L   G V+ATG ND GQLG      +S  P+++ GL   VV +
Sbjct: 44  DAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHS-APVQVPGLSG-VVAV 101

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS A+  DG ++ WG NS+GQLG G    ++ P+  +V+ LSG+ +   A G   
Sbjct: 102 AAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV--RVQGLSGVVS--VAAGSSY 157

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+AV   G V +WG+  SG+LG G  S+ L          P  +  L GV V + AAG  
Sbjct: 158 SLAVRSDGTVWAWGSNFSGQLGDGTTSNRL---------VPVQVPGLSGV-VSV-AAGSS 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSG 306
           HS  +  +G V+ +G  +  ++   +G    R  P  +  L     V  G  H+  + S 
Sbjct: 207 HSLAVLSDGSVWAWGANSSGQL--GDGTKINRLVPVQVPGLSGVVAVAAGAAHSLAVRSD 264

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G ++TWG+N  G LG G+      P RVQG    S V     G  H+ A+ S+G +  W 
Sbjct: 265 GTVWTWGANSFGQLGDGTKSDRLVPVRVQG---LSGVVASDVGSYHSLALRSDGSVWAW- 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                      GH+S GQLG  +      P  V
Sbjct: 321 -----------GHNSSGQLGDDSSTSRSVPVQV 342



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 8/170 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+  +R  P            A+A GG H+L +   G V+  G N FG+
Sbjct: 568 WGSNSSGELGDGTTSNRLVPGRVPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGE 625

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+++ GL   VV +  G  HS A+  DG ++ WG NS GQLG G    
Sbjct: 626 LGDGTTTSRSV-PVQVQGLSG-VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTR 683

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           + +P+  +V  LSG+     A G    + V   G V +WG    G+LG+G
Sbjct: 684 RSVPV--QVPGLSGVVAM--ATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 175/357 (49%), Gaps = 36/357 (10%)

Query: 43  WGNGDYGRLGL-------GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG G  G LGL        +     +P     F   +++ +ACG  HTL L   G VY+ 
Sbjct: 56  WGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVYSC 115

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G NDFGQLG   ++   LE  +++ L   E+  ++ G  HS A++  G+++ WG N NGQ
Sbjct: 116 GANDFGQLGQDRSM-RKLE--QVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQ 172

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +    +  P  ++ L+ +   Q A G    +A+   G++ SWG   SG+LG G++
Sbjct: 173 LGCGTEEESRLR-PKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRD 231

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S       + +E  PR +  L GV + + A G +HS  +  +G V+++G  +  ++   +
Sbjct: 232 S-------TGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSD 284

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 P+++  L     + V CG  HT  LT+ G ++T+G+   G LG G + V  +  
Sbjct: 285 QRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHG-VKVNEAVP 343

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS--EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           R       + + Q+SCG  HT A +   G++  +G G S            GQLG+G
Sbjct: 344 RRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMS------------GQLGNG 388



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 138/297 (46%), Gaps = 15/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D+G+LG      +   V  +A   H ++A+ACG AH+L L++ G V++ G N  GQL
Sbjct: 116 GANDFGQLGQDRSMRKLEQV--AALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQL 173

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G        L P  I  L    +VQI+ G  H  A+  +GEL+ WG N++GQLGLG+ + 
Sbjct: 174 GCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDST 233

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V  L G+     A G   SV +T  G V  WG    G+LG   +   L    
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLH--- 290

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P ++K L   ++K    G  H+A +  +G V+ FG     ++      +   P 
Sbjct: 291 ------PTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPR 344

Query: 283 LISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L      ++ CG  HT       G LY +G   +G LG G+++    P  V G
Sbjct: 345 RVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPG 401



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 126/287 (43%), Gaps = 35/287 (12%)

Query: 144 LYMWGKNSNGQLGL-----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           LY WG   NG+LGL     G      +  P +V        ++ A G + ++ +   G V
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            S GA   G+LG  +       +R   +     +  L   +++  A G  HS  + + G+
Sbjct: 113 YSCGANDFGQLGQDRS------MRKLEQ-----VAALSAHEIRAVACGEAHSLALSDAGQ 161

Query: 259 VYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
           V+ +G +R        E     RP +I KL   +  ++ CG  H   L + GEL++WG N
Sbjct: 162 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221

Query: 316 ENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
            +G LG+G  S      P RV       P+  V+CG  H+  ++  G +  WG       
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVSH-LVGVPLALVACGAMHSVGLTPSGTVFVWG------- 273

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 +S GQLG  +  D +HPT++    + +   V CG NHT AL
Sbjct: 274 -----RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAAL 315



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 1/127 (0%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGL     R  P V        +K + CG  HT  LT  G V+  G   +G
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYG 330

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKK 160
           QLG    +  ++    +  +   + Q+S G  H+ A     G LY++G   +GQLG G  
Sbjct: 331 QLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTL 390

Query: 161 AAKVIPI 167
            +  +P+
Sbjct: 391 ESSALPV 397


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG   ++    +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG---HVREGNKPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HVREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SYGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHVREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G   +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 170/343 (49%), Gaps = 32/343 (9%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  L
Sbjct: 479 PQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGAL 535

Query: 122 KKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
             + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+     
Sbjct: 536 ADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVA-VPRLIQKLNQQTIL 594

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ +
Sbjct: 595 QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIPL 646

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGG 297
              AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG 
Sbjct: 647 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCGE 705

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
            HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A  
Sbjct: 706 EHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLE-LMGSEVTQIACGRQHTLAFV 764

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S G I  +G G              GQLG G+  +   P+ V
Sbjct: 765 PSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 795



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 463 LGQPGISSNLQGIVAEP-QVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 521

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 522 HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 571

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 572 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 627

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 628 EFPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 686

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+       V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 687 PCHVKL-LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 733

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 734 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 764



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 29/281 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQ G+      ++  P     ++    K+ A G   SV +   G+V + G 
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGL 514

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G
Sbjct: 515 NTKGQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWG 563

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G L
Sbjct: 564 AGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQL 623

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           G+G       SP+RV+      P+ QV+ G  H+ A+S  G +  WG             
Sbjct: 624 GLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------ 670

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 671 NNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 711



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 668 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 727

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 728 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 786

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 787 CNVKCPSPVK 796


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++ L +
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           E      P  +  L   P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EYPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEYPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 179/387 (46%), Gaps = 36/387 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P +C +  + +  A+  GG  TLF +T+ G VYA+G    G
Sbjct: 3839 WGHNHRGQLGGIEGNKVKSPRLCESLSELN-PAMITGGEQTLFAVTDDGKVYASGYAAHG 3897

Query: 102  QLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI  S+N+     L  L   G+  + + I +G  H  A+T  GELY WG+  +G+LGL
Sbjct: 3898 RLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDGKLGL 3957

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G      + +P  +E L       A  G   S  +T  G + +WG G  GRLGH    + 
Sbjct: 3958 GTTVN--MNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHET- 4014

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                    ++ P+L+  L+G +V   A  +G   + C   +G V+ +GD    K L + G
Sbjct: 4015 --------QHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGK-LGRGG 4065

Query: 276  NH-ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            N  ++ P  I  L   +  +++CG   +  LT+ G +YTWG  +   LG G      +P 
Sbjct: 4066 NEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPR 4125

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            RV G  +   V  + CG  H    +E GK+ +W            G +  GQ+G+     
Sbjct: 4126 RVLGLLAHENVIDIGCGSLHCIVCTESGKVFSW------------GDNDEGQIGNDTTQA 4173

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P  +N  +N+    V+CG  H+ A
Sbjct: 4174 VSVPKRINITDNICIDHVACGSAHSIA 4200



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 33/388 (8%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            +WG  D  +LG    E++ + P+      +      A G   +  +++ G V+A G    
Sbjct: 2928 VWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEGSS 2987

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI       + P +IS L   VV+   +S    H  A+T DG+++ WG    GQLG 
Sbjct: 2988 GRLGIGGFANIRM-PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGH 3046

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G  + +    P  +E       ++ + G   S AV+  G++ +WG G  GRLGHG     
Sbjct: 3047 G--SLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGD---- 3100

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDKMLFQEGN 276
                 S ++  P+L++ LE V++   A G  ++  +   +  ++ +GD +  K+  ++G+
Sbjct: 3101 -----SNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGS 3155

Query: 277  HARR-PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +   P  +   P +  ++ CG + + +LT  G++YTWG  E   LG  S  V   P  V
Sbjct: 3156 SSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLV 3215

Query: 335  QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             G  S++ + QV+ G  H  A+ S G++ +WG         ++ H   GQ G+ + +   
Sbjct: 3216 DGLASKT-ITQVAVGALHCLALTSSGEVYSWG---------DNEH---GQQGNNSTICNR 3262

Query: 394  HPTIVNFGENVKALQVSCGFNHTGALLE 421
             P IV   +  +  +++CG +H+ A  +
Sbjct: 3263 KPQIVASLKGHRICKIACGSSHSIAFAQ 3290



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 155/353 (43%), Gaps = 18/353 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G   +   P   S+   + ++  A++C G H L +T  G V++ G   +G
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYG 3042

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG      Y    +      K + ++S G  HS+A++V+GEL+ WG+ ++G+LG G   
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSN 3102

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGF 220
             +  P    V  L  +     A G   +  +  G   L +WG G  G+LG    SS    
Sbjct: 3103 NQTKP--KLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSS---- 3156

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                S   P  +       ++I   G   S  + + G+VY +G     ++     +    
Sbjct: 3157 ----STDVPVQVITFPSNIIQIEC-GMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPI 3211

Query: 281  PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P+L+  L      +V  G  H   LTS GE+Y+WG NE+G  G  S      P+ V    
Sbjct: 3212 PTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIV-ASL 3270

Query: 339  SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
                + +++CG  H+ A ++G  LT     S  +FS      G  + HG   D
Sbjct: 3271 KGHRICKIACGSSHSIAFAQGS-LTTAVKFSPISFSNSKDPLGASIVHGKSSD 3322



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 155/341 (45%), Gaps = 43/341 (12%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
            V+  GLND  QLG   +      P+    L +   +Q + G   S  ++ DG+++  G+ 
Sbjct: 2926 VFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGEG 2985

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGR 208
            S+G+LG+G  A   I +P ++  LS    ++ A+       +AVT  GKV SWG G  G+
Sbjct: 2986 SSGRLGIGGFAN--IRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG   S+  + R      P++I+  +   ++  + G  HSA +  NG ++ +G  A  
Sbjct: 3044 LGHG---SLQSYDR------PKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADG 3094

Query: 269  KMLFQEGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSG-GELYTWGSNENGCLGI--- 322
            ++   + N+  +P L+  L       V CG  +   L +G   L+ WG    G LG+   
Sbjct: 3095 RLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDG 3154

Query: 323  -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
              S DV      VQ     S + Q+ CG   +  ++ EGK+ TWG G  +          
Sbjct: 3155 SSSTDV-----PVQVITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRL-------- 3201

Query: 381  GGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGAL 419
                  GND   +   PT+V+   +    QV+ G  H  AL
Sbjct: 3202 ------GNDSTSVQPIPTLVDGLASKTITQVAVGALHCLAL 3236



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 130/265 (49%), Gaps = 23/265 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
           G H L LT+ G VY+ G    G LGI  N      P  ++ L    +V IS G  HS+A+
Sbjct: 517 GNHILALTKDGKVYSWGQGSNGVLGIG-NTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           T DG LY WGK S G+LG G    K+  IPT VE L+G+   Q   G     ++A+   G
Sbjct: 576 TEDGVLYTWGKGSYGRLGHGNAEDKL--IPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 197 KVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           +V SWG G  G+LG  G + + +    S    T  ++K + G ++ +A         + +
Sbjct: 634 QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMA---------LTK 684

Query: 256 NGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
           +G++Y +G    D      GN  H R+P LI  L  +   +V  G  H   LT+  ++Y 
Sbjct: 685 DGKLYSWG--CGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYA 742

Query: 312 WGSNENGCLGIGSIDVLHSPERVQG 336
           WG N +  +   S D++ SP  ++ 
Sbjct: 743 WGKNSSFEVN-ESGDIISSPLMIEA 766



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 26/273 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+G YG+LG GSL+S  RP +   F+   ++ ++CG  H+  ++  G ++  G    G+
Sbjct: 3036 WGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGR 3095

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
            LG  ++   + +P  +  L+K  +  ++ G  ++  +   D  L+ WG  S G+LGL K 
Sbjct: 3096 LGHGDSNNQT-KPKLVRALEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGL-KD 3153

Query: 161  AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    +P +V    S I   +  + F  SV +T  GKV +WG G   RLG+   S    
Sbjct: 3154 GSSSTDVPVQVITFPSNIIQIECGMHF--SVLLTKEGKVYTWGKGEYYRLGNDSTS---- 3207

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                  +  P L+  L    +   A G LH   +  +G VY +GD        Q+GN++ 
Sbjct: 3208 -----VQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEHG----QQGNNST 3258

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
               R+P +++ L      ++ CG  H+     G
Sbjct: 3259 ICNRKPQIVASLKGHRICKIACGSSHSIAFAQG 3291



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 26/283 (9%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
             ++++WG N   QLG     AKV   P +   L+ +   Q A G + S  V+  GKV + 
Sbjct: 2924 NKVFVWGLNDMRQLGTDLSEAKV-KSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFAC 2982

Query: 202  GAGGSGRLGHGQESSIL--GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            G G SGRLG G  ++I     + S S Y  R        KV ++ AG  H   +  +G+V
Sbjct: 2983 GEGSSGRLGIGGFANIRMPHQISSLSMYVVR--------KVAVSCAG-RHVLAVTADGKV 3033

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +GD    ++         RP +I   +  +  EV CG  H+  ++  GEL+TWG   +
Sbjct: 3034 FSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGAD 3093

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
            G LG G  +    P+ V+    +  +  V+CG ++   ++ G    W WG   G+F + G
Sbjct: 3094 GRLGHGDSNNQTKPKLVRA-LEKVRISCVACGSRNAHTLAAGDNSLWAWGD--GSFGKLG 3150

Query: 378  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                  L  G+    +   ++ F  N+  +Q+ CG  H   LL
Sbjct: 3151 ------LKDGSSSTDVPVQVITFPSNI--IQIECGM-HFSVLL 3184



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 107/228 (46%), Gaps = 22/228 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G LG+G+ ES+  P   +A     +  ++ G  H+  +TE G +Y  G   +G+
Sbjct: 532 WGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGR 591

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    L P  + GL   ++VQ+   +G  H+ A+   G+++ WG    G+LG   
Sbjct: 592 LG-HGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPG 650

Query: 160 KAAKVIPIPTKVECLSGIFTKQAAL----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                +P P     +SGI +    +    G + S+A+T  GK+ SWG G + +LGHG + 
Sbjct: 651 SDQNKVPKP-----ISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQE 705

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+LI+ L    V   + G  H   +  +  VY +G
Sbjct: 706 HV---------RQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  GKV SWG G +G LG G          + S+  P  +  L G ++   +AG +H
Sbjct: 521 LALTKDGKVYSWGQGSNGVLGIGN---------TESQTAPTAVAALSGDRIVHISAGSMH 571

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTS 305
           SA + E+G +Y +G  +  ++          P+++  L   +  +V CG    HT  L  
Sbjct: 572 SAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDD 631

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G++++WG  + G LG    D    P+ + G  S SPV ++ CG + + A++ +GK+ +W
Sbjct: 632 TGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSW 691

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G ++            QLGHGN      P ++          VS G  H  AL
Sbjct: 692 GCGDTY------------QLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 95/212 (44%), Gaps = 46/212 (21%)

Query: 225 SEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYI-----FGDRAVDKMLFQEG 275
           SE  P +I +   + ++I A  F     H   +  +G V+       GD  V+++ F   
Sbjct: 447 SEGGPSII-QTSNILLEIGAKEFYSSPKHRVVLTVHGTVFYVMDASMGDFTVEQLFF--- 502

Query: 276 NHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                       P  EE++       G H   LT  G++Y+WG   NG LGIG+ +   +
Sbjct: 503 ------------PGDEEIIQIDHNPSGNHILALTKDGKVYSWGQGSNGVLGIGNTESQTA 550

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V    S   +  +S G  H+AA++E  +L TWG G            S G+LGHGN 
Sbjct: 551 PTAVAA-LSGDRIVHISAGSMHSAAVTEDGVLYTWGKG------------SYGRLGHGNA 597

Query: 390 VDYIHPTIVNFGENVKALQVSCGF--NHTGAL 419
            D + PTIV     VK +QV CG    HT AL
Sbjct: 598 EDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 7/161 (4%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG+GDYG+LG G  E    P    +   KH +K L CG   ++ LT  G VY  G  D+ 
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIK-LLCGSQFSMALTTAGHVYTWGKGDYY 4111

Query: 102  QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LG  ++  +   P R+ GL   + V+ I  G  H    T  G+++ WG N  GQ  +G 
Sbjct: 4112 RLGHGDD-SHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQ--IGN 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
               + + +P ++     I     A G   S+A +   + LS
Sbjct: 4169 DTTQAVSVPKRINITDNICIDHVACGSAHSIAWSSKQRNLS 4209



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 99/232 (42%), Gaps = 19/232 (8%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            ++ WG N  GQLG G +  KV   P   E LS +       G +   AVT  GKV + G 
Sbjct: 3836 VFGWGHNHRGQLG-GIEGNKV-KSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGY 3893

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
               GRLG G   ++       +  TP       G+ VK  A  +G  H   +   G +Y 
Sbjct: 3894 AAHGRLGIGSSDNV-------ATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
            +G+    K+      +   P LI  L  S+ V+   CG  H+  +T  G LYTWG    G
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESL-KSKHVIDAGCGSSHSACITDDGSLYTWGKGRYG 4005

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCG---WKHTAAISEGKILTWGWG 367
             LG    +  H P+ V     E  V  V+CG    +   A + G + +WG G
Sbjct: 4006 RLGHNDHETQHKPKLVSALKGEQ-VTCVACGSGDAQTLCATASGCVFSWGDG 4056



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 29/222 (13%)

Query: 198  VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            V  WG    G+LG  + + +          +PRL + L  +   +   G      + ++G
Sbjct: 3836 VFGWGHNHRGQLGGIEGNKV---------KSPRLCESLSELNPAMITGGEQTLFAVTDDG 3886

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYT 311
            +VY  G  A  ++     ++   P+ ++ L      V       GG H   +T+ GELY 
Sbjct: 3887 KVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYA 3946

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
            WG  E+G LG+G+   ++ P  ++   S+  +D   CG  H+A I+ +G + TWG G   
Sbjct: 3947 WGEGEDGKLGLGTTVNMNVPHLIESLKSKHVID-AGCGSSHSACITDDGSLYTWGKG--- 4002

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                       G+LGH +      P +V+  +  +   V+CG
Sbjct: 4003 ---------RYGRLGHNDHETQHKPKLVSALKGEQVTCVACG 4035



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 18/154 (11%)

Query: 274  EGNHARRPSLISKL-PYSEEVVCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EGN  + P L   L   +  ++ GG  T   +T  G++Y  G   +G LGIGS D + +P
Sbjct: 3851 EGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATP 3910

Query: 332  ERVQGPFSES-PVDQVSC--GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              +    +    V +++   G KH  A++ +G++  WG G       EDG     +LG G
Sbjct: 3911 TPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEG-------EDG-----KLGLG 3958

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              V+   P ++   ++   +   CG +H+  + +
Sbjct: 3959 TTVNMNVPHLIESLKSKHVIDAGCGSSHSACITD 3992


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 171/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQTSPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A+
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLAL 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAK------------GQLGTGHTCNVKCPSPV 341



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT  L  S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKG 343



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 9   LGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH 68

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 69  EREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------- 117

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 118 ---LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKE 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP
Sbjct: 175 FPSQTSPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  
Sbjct: 234 CHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSVN 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT AL+
Sbjct: 281 DEVNPRRVLELMGSEVTQIACGRQHTLALV 310


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SYGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L S G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G   +GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  136 bits (343), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 34/347 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           ++CG +H+ F+TE G ++  G N+ GQLG+    G   +P+ +  LK E  Q ++ G  H
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIK-GPVTKPVCVKVLKGERAQSVACGTDH 97

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T  GE+   G NS+GQLGLG     +     +  C      K  + G   S A+T 
Sbjct: 98  TLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI-KLLSAGDHTSAALTE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            G++  WG   +G+LG G +S  L            L +EL  G  +   + G+ HSA +
Sbjct: 157 DGRLFLWGDNSAGQLGFGNDSHAL------------LPQELNMGQSIHWVSCGYRHSALV 204

Query: 254 DENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            ++G VY FG+ A  ++     Q  NH+  P  +  L    +V CGG HT  LT   ELY
Sbjct: 205 TDSGDVYTFGESADGRLGLSAHQLANHSY-PQRVESLRSVLQVACGGKHTLALTED-ELY 262

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
            +G  E G LG+G +  +       G F +  V  V+CG +H+A I++  +L        
Sbjct: 263 CFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITDSGLLY------- 315

Query: 371 GTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNH 415
            TF +  H   G+LGHG++   +   PT+         + V+CG +H
Sbjct: 316 -TFGDGRH---GKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSSH 358



 Score =  125 bits (314), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 169/342 (49%), Gaps = 44/342 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + +TG V+      FG+  I+ +      P R+  LK ++ V IS G  HS+ +T  G L
Sbjct: 7   IPDTGAVFT-----FGKSKIANS-----APSRL-WLKSDIPVHISCGQSHSAFVTEQGRL 55

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +++G N+ GQLGL  K     P+  KV  L G   +  A G + ++  T  G++L+ G  
Sbjct: 56  FVFGDNNRGQLGLQIKGPVTKPVCVKV--LKGERAQSVACGTDHTLVSTSQGEILAAGGN 113

Query: 205 GSGRLGHGQESSILGF--LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G+LG G  +  + F  LR   +Y P          +K+ +AG   SA + E+GR++++
Sbjct: 114 SDGQLGLGHCNDSISFQRLRPFCDYAP----------IKLLSAGDHTSAALTEDGRLFLW 163

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           GD +  ++ F   +HA  P  ++       V CG  H+ ++T  G++YT+G + +G LG+
Sbjct: 164 GDNSAGQLGFGNDSHALLPQELNMGQSIHWVSCGYRHSALVTDSGDVYTFGESADGRLGL 223

Query: 323 GSIDVL-HS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
            +  +  HS P+RV+   S   V QV+CG KHT A++E ++  +G G             
Sbjct: 224 SAHQLANHSYPQRVE---SLRSVLQVACGGKHTLALTEDELYCFGGG------------E 268

Query: 381 GGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 421
            GQLG G  V     P  V      +   V+CG  H+  + +
Sbjct: 269 FGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSALITD 310



 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 103/352 (29%), Positives = 159/352 (45%), Gaps = 23/352 (6%)

Query: 7   TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
           +A ++ +LK DI +    G       +   R F  ++G+ + G+LGL       +PV   
Sbjct: 24  SAPSRLWLKSDIPVHISCGQSHSAFVTEQGRLF--VFGDNNRGQLGLQIKGPVTKPVCVK 81

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEV 125
             +    +++ACG  HTL  T  G + A G N  GQLG+   N   S + LR       +
Sbjct: 82  VLKGERAQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPI 141

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +S G H S+A+T DG L++WG NS GQLG G  +  ++P     E   G      + G
Sbjct: 142 KLLSAGDHTSAALTEDGRLFLWGDNSAGQLGFGNDSHALLP----QELNMGQSIHWVSCG 197

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           +  S  VT  G V ++G    GRLG       L   +  +   P+ ++ L  V +++A  
Sbjct: 198 YRHSALVTDSGDVYTFGESADGRLG-------LSAHQLANHSYPQRVESLRSV-LQVACG 249

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
           G  H+  + E+  +Y FG     ++ L      A  P  +          V CG  H+ +
Sbjct: 250 G-KHTLALTED-ELYCFGGGEFGQLGLGMLVFVADSPVAVGHFRKDRVTHVTCGEQHSAL 307

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKH 352
           +T  G LYT+G   +G LG G  +  +  +P   Q  F E  V  V+CG  H
Sbjct: 308 ITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQ-RFFEYSVMTVACGSSH 358


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 28  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 84

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 85  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 143

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 144 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 195

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 196 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 254

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 255 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 313

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 314 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 345



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 13  LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 71

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 72  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 121

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 122 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 177

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 178 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 236

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 237 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 283

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 284 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 314



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 8   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 67

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 68  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 116

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 117 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 176

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 177 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 223

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 224 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 261



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 218 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 277

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 278 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 336

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 337 CNVKCPSPVK 346


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG++        P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKD---------RESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + +NG V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 157/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +   GE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +  GG+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT+ G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 183/382 (47%), Gaps = 42/382 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS +S   PV         + A++ G  H+L L   G V+A G N  GQ
Sbjct: 20  WGGNALGQLGDGSSDSHSEPVRVRGLS--GVVAVSAGEGHSLALHRDGTVWAWGDNALGQ 77

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +  +S EP+R+ GL   VV +S G +HS A+  DG ++ WG N++ QLG G   A
Sbjct: 78  LGDGTSDSHS-EPVRVPGLSG-VVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGA 134

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +P ++E LS +     A G   S+AV   G V +WG   +G+LG G    IL    
Sbjct: 135 QSYSVPWRLEDLSEVVA--VAAGGNHSLAVRADGTVWAWGDNFAGQLGDGN---IL---- 185

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-----H 277
            T+ + P+ ++ L GV    A+AG+ HS     +G V+ +G+    ++    GN     +
Sbjct: 186 -TTRWLPKQVQGLSGVVA--ASAGWAHSMVALSDGSVWAWGNNTSGQL----GNGISVGY 238

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +  L     V  GG ++  L S G L+ WGSN++G  G GS   L S  RV+  
Sbjct: 239 GALPEQVQGLRGVMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVR-- 296

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
              S V  ++ G  H+ A+     L W WG ++           GQLG G   D+  P  
Sbjct: 297 -WLSGVVAMAAGSAHSLAVRSDGTL-WAWGANY----------YGQLGDGTRKDHDTPKR 344

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V     V A  V+ G  H+ AL
Sbjct: 345 VQGLSRVVA--VAAGDGHSIAL 364



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 118/376 (31%), Positives = 174/376 (46%), Gaps = 37/376 (9%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG G+ L +RW P          + A + G AH++     G V+A G N  G
Sbjct: 171 WGDNFAGQLGDGNILTTRWLPKQVQGLS--GVVAASAGWAHSMVALSDGSVWAWGNNTSG 228

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   ++GY   P ++ GL+  V+ ++ G  +S A+  DG L+ WG N +GQ G G   
Sbjct: 229 QLGNGISVGYGALPEQVQGLRG-VMAVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGSTV 287

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +    +V  LSG+    A  G   S+AV   G + +WGA   G+LG G         
Sbjct: 288 --YLSSSVRVRWLSGVVAMAA--GSAHSLAVRSDGTLWAWGANYYGQLGDGTR------- 336

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 TP+ ++ L   +V   AAG  HS  +  +G V+ +G     ++     N +  P
Sbjct: 337 --KDHDTPKRVQGLS--RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVP 392

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             + +L     V  G  H+  + S G ++ WG N  G LG GS+     P RVQG    S
Sbjct: 393 LHVRELSGVVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQG---LS 449

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  VS G  H+ A  ++G +  W WGG          +S GQLG G   + + P  V  
Sbjct: 450 GVAAVSAGLNHSLARGTDGGV--WAWGG----------NSFGQLGEGTTSNALVPVRVRG 497

Query: 401 GENVKALQVSCGFNHT 416
              V+   +S GFNH+
Sbjct: 498 LSGVE--TISAGFNHS 511



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 153/331 (46%), Gaps = 37/331 (11%)

Query: 43  WGNGDYGRLGLGS-------LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           WG+ D+G+ G GS       +  RW   V          A+A G AH+L +   G ++A 
Sbjct: 273 WGSNDHGQRGDGSTVYLSSSVRVRWLSGVV---------AMAAGSAHSLAVRSDGTLWAW 323

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G N +GQLG      +   P R+ GL + VV ++ G  HS A+  DG ++ WG N +GQL
Sbjct: 324 GANYYGQLGDGTRKDHD-TPKRVQGLSR-VVAVAAGDGHSIALCADGTVWTWGYNHDGQL 381

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             G       P+P  V  LSG+     A G   S+AV   G V +WG    G+LG G   
Sbjct: 382 AHGSTNDS--PVPLHVRELSGVVA--VAAGALHSLAVLSDGSVWAWGYNRQGQLGDGS-- 435

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                L S++E  P  ++ L GV     +AG  HS     +G V+ +G  +  ++     
Sbjct: 436 -----LSSSAE--PVRVQGLSGVAA--VSAGLNHSLARGTDGGVWAWGGNSFGQLGEGTT 486

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           ++A  P  +  L   E +  G  H+    S G L+ WG N  G LG G+      P RVQ
Sbjct: 487 SNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRVQ 546

Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G    S V  V  G  H+ A+ ++G +  WG
Sbjct: 547 G---LSGVAAVFAGLNHSLAVRTDGSVWAWG 574



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 40/383 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+ +S   PV         + A++ G  H+L L   G V+A G N+  Q
Sbjct: 70  WGDNALGQLGDGTSDSHSEPVRVPGLS--GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQ 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG +        P R+  L  EVV ++ G +HS A+  DG ++ WG N  GQLG G    
Sbjct: 128 LGGAPGAQSYSVPWRLEDLS-EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILT 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V+ LSG+    A  G+  S+     G V +WG   SG+LG+G     +G+  
Sbjct: 187 TRW-LPKQVQGLSGVVAASA--GWAHSMVALSDGSVWAWGNNTSGQLGNGIS---VGY-- 238

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV     AAG L+S  +  +G ++ +G    D     +G+     S
Sbjct: 239 ---GALPEQVQGLRGVMA--VAAGGLYSLALRSDGTLWAWGSN--DHGQRGDGSTVYLSS 291

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++ +   VV    G  H+  + S G L+ WG+N  G LG G+     +P+RVQG   
Sbjct: 292 SV-RVRWLSGVVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQG--- 347

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S V  V+ G  H+ A+ ++G + TWG       ++ D     GQL HG+  D   P  +
Sbjct: 348 LSRVVAVAAGDGHSIALCADGTVWTWG-------YNHD-----GQLAHGSTND--SPVPL 393

Query: 399 NFGENVKALQVSCGFNHTGALLE 421
           +  E    + V+ G  H+ A+L 
Sbjct: 394 HVRELSGVVAVAAGALHSLAVLS 416



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 35/346 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ +    P       +  + A+A G  H++ L   G V+  G N  GQ
Sbjct: 323 WGANYYGQLGDGTRKDHDTPKRVQGLSR--VVAVAAGDGHSIALCADGTVWTWGYNHDGQ 380

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           L    +   S  PL +  L   VV ++ G  HS A+  DG ++ WG N  GQLG G  ++
Sbjct: 381 L-AHGSTNDSPVPLHVRELSG-VVAVAAGALHSLAVLSDGSVWAWGYNRQGQLGDGSLSS 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V+ LSG+    A  G   S+A    G V +WG    G+LG G  S+ L    
Sbjct: 439 SAEPV--RVQGLSGVAAVSA--GLNHSLARGTDGGVWAWGGNSFGQLGEGTTSNAL---- 490

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L GV+    +AGF HS     +G ++ +G     ++     +++  P 
Sbjct: 491 -----VPVRVRGLSGVET--ISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPV 543

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  + + G ++ WG N  G LG G+ +   +P RVQG    S 
Sbjct: 544 RVQGLSGVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQG---LSG 600

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           ++ V+ G  H+ ++ S+G +  W WG +H       H   GQLGHG
Sbjct: 601 METVAAGSLHSLSVGSDGSM--WSWGNNH-------H---GQLGHG 634



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 4/125 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +   PV         + A+  G  H+L +   G V+A G+N FGQ
Sbjct: 523 WGGNYTGQLGDGTTSNSSVPVRVQGLS--GVAAVFAGLNHSLAVRTDGSVWAWGINSFGQ 580

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+R+ GL   +  ++ G  HS ++  DG ++ WG N +GQLG G    
Sbjct: 581 LG-EGTTNTSFAPVRVQGLSG-METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR 638

Query: 163 KVIPI 167
              P+
Sbjct: 639 SPTPV 643



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 89/208 (42%), Gaps = 28/208 (13%)

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + S+A+   G V +WG    G+LG G          S S   P  ++ L GV    
Sbjct: 2   AAGTDHSLALRHDGTVWAWGGNALGQLGDGS---------SDSHSEPVRVRGLSGVVAVS 52

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
           A  G  HS  +  +G V+ +GD A+ ++     +    P  +  L     V  G  H+  
Sbjct: 53  AGEG--HSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLA 110

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
           L S G ++ WG N +  LG       +S P R++     S V  V+ G  H+ A+ ++G 
Sbjct: 111 LRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLE---DLSEVVAVAAGGNHSLAVRADGT 167

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           +  WG       F+       GQLG GN
Sbjct: 168 VWAWG-----DNFA-------GQLGDGN 183


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 173/374 (46%), Gaps = 32/374 (8%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           ST+  +    WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T  G
Sbjct: 71  STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGK 149
            VY+ G ND+GQLG  E     L+   I GL   V  +++ G HH+ A+   G+L+ WG 
Sbjct: 131 QVYSCGNNDYGQLG-HEKGRKRLQ--LIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGS 187

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N+ GQLGL  K   +  +P  V  L      Q A G    +A+T  GK+ SWG+   G+L
Sbjct: 188 NAEGQLGLNSKNL-IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQL 246

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G +          +E  P+LI  L GV +     G  HS  I ++G V+ +G     +
Sbjct: 247 GLGTDVK--------NEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQ 298

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   +  +   P  +  L  ++     CG   +  LT  G ++T G+   G LG G+   
Sbjct: 299 LGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSN 358

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
              P +V      S V Q+SCG +HT  +  S G++  WG GG+            GQLG
Sbjct: 359 EILPRQVM-ELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGA------------GQLG 405

Query: 386 HGNDVDYIHPTIVN 399
           +        P +V+
Sbjct: 406 NNITRSVATPQVVH 419



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 139/298 (46%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K +ACG  HTL + E G +++ G N  GQL
Sbjct: 136 GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQL 193

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQ++ G +H  A+T +G+LY WG NS+GQLGLG    
Sbjct: 194 GLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLGTDVK 253

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +  L+G+       G   S+A++  G V  WG    G+LG            
Sbjct: 254 NEIK-PKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFGQLGLND--------- 303

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   PR ++ L+  KV  AA G   S  +  +G V+  G     ++     ++   P 
Sbjct: 304 TRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPR 363

Query: 283 LISKLPYS--EEVVCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   ++ CG  HT  ++ S G +Y WG    G LG      + +P+ V GP
Sbjct: 364 QVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHGP 421



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 155/332 (46%), Gaps = 43/332 (12%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI   L P  +   K  E+ QI+ G +++  IT DG++Y  G N  GQL
Sbjct: 87  GELGLGGIEDENI---LVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQL 143

Query: 156 G--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           G   G+K  ++IP       L     K+ A G   ++AV   G++ SWG+   G+LG   
Sbjct: 144 GHEKGRKRLQLIP------GLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNS 197

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
           ++ I        E  P +++ L    V   A G  H   +  NG++Y +G  +  ++ L 
Sbjct: 198 KNLI--------ECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGSNSDGQLGLG 249

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            +  +  +P LIS L   P +  + CGGYH+  ++  G ++ WG N  G LG+      +
Sbjct: 250 TDVKNEIKPKLISSLAGVPIAF-ITCGGYHSMAISKSGAVFGWGKNTFGQLGLNDTRNRN 308

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P ++Q     + V   +CG + +  ++ +G + T G G              GQLGHGN
Sbjct: 309 LPRQLQT-LQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMY------------GQLGHGN 355

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             + I P  V         Q+SCG  HT  L+
Sbjct: 356 TSNEILPRQVMELMGSTVTQISCGKRHTLGLV 387



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 25/279 (8%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           +   D  ++ WG   +G+LGLG    + I +P +++       +Q A G   +V +T  G
Sbjct: 71  STVTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDG 130

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V S G    G+LGH +    L           +LI  L+    K  A G  H+  ++E 
Sbjct: 131 QVYSCGNNDYGQLGHEKGRKRL-----------QLIPGLDAFVFKKVACGAHHTLAVNEW 179

Query: 257 GRVYIFGDRAVDKMLFQEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
           G+++ +G  A  ++     N     P ++  L  S   +V CG  H   LT+ G+LY+WG
Sbjct: 180 GQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWG 239

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
           SN +G LG+G+        ++    +  P+  ++CG  H+ AIS+   + +GWG +  TF
Sbjct: 240 SNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAV-FGWGKN--TF 296

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                   GQLG  +  +   P  +   +N K    +CG
Sbjct: 297 --------GQLGLNDTRNRNLPRQLQTLQNAKVCYAACG 327



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 123/273 (45%), Gaps = 35/273 (12%)

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV----TGGGKVLSWGAGGSGRLG 210
           L L  K + +IPI            K+  L  E  +AV         +  WG+   G LG
Sbjct: 37  LTLPFKCSNIIPIKNANR------NKKRRLACEPIIAVEYSTVTDKNMFCWGSTIHGELG 90

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
                  LG +   +   PR +   +  +++  A G  ++  I  +G+VY  G+    ++
Sbjct: 91  -------LGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGNNDYGQL 143

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
             ++G   +R  LI  L     ++V CG +HT  +   G+L++WGSN  G LG+ S +++
Sbjct: 144 GHEKGR--KRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLI 201

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
                +      S V QV+CG  H  A++  GK+ +W            G +S GQLG G
Sbjct: 202 ECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSW------------GSNSDGQLGLG 249

Query: 388 NDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DV + I P +++    V    ++CG  H+ A+
Sbjct: 250 TDVKNEIKPKLISSLAGVPIAFITCGGYHSMAI 282


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 170/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      ++K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS ++ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTSLQGIVAEP-QVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 176/390 (45%), Gaps = 36/390 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            G    G LG  +   +    +  +  +  +  +A G   + FLTE G VY  GLN  GQ
Sbjct: 45  CGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCGLNSTGQ 104

Query: 103 LGISENIG-------YSLEPLRISGLKKE--VVQIS--TGYHHSSAITVDGELYMWGKNS 151
           L    + G       YS +   + GL  +  VVQ+S   G  H   +T  G++Y  G N+
Sbjct: 105 LARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNN 164

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           +GQLGLG  + K+ P    VE L  +    A+  +  SV V+  G   S+G    G+LG 
Sbjct: 165 HGQLGLG--STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGI 222

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G   + L          P  ++      V++AA G  H+  + E G V+  G     ++ 
Sbjct: 223 GTRPNQL---------LPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLG 273

Query: 272 FQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
               +    P+LI+ L    +  + CG  HTCV+   G+L+T+G N  G LG+G  D + 
Sbjct: 274 LGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVS 333

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           SP +V+       V ++SCG   T  +SE   L W +G           +  GQLG G+ 
Sbjct: 334 SPMQVE-TLRNVKVVKISCGTHFTCVLSESGEL-WSFGC----------NCHGQLGLGDS 381

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            D + P +V         +++CGF+H  A+
Sbjct: 382 TDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 141/283 (49%), Gaps = 18/283 (6%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
           G  H L +T  G VY+ G N+ GQLG+ S  +  SL  L +  LK   V+  S  YHHS 
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSL--LLVESLKHVRVLSASCSYHHSV 201

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
            ++ DG  + +G N  GQLG+G +  +++P   +VE  S    + AA G   ++ +T  G
Sbjct: 202 VVSSDGSAFSFGLNDCGQLGIGTRPNQLLP--HRVELPSPHLVRLAACGQYHTIFLTEEG 259

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V S G   +G+LG G  SS            P LI  L+     + A G+ H+  + E+
Sbjct: 260 MVFSCGKNLNGQLGLGSRSST---------NVPTLIAALQERPASMIACGYSHTCVVLED 310

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G+++ FG     ++     +    P  +  L   +  ++ CG + TCVL+  GEL+++G 
Sbjct: 311 GKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGC 370

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           N +G LG+G       P  V    ++  + +++CG+ H  AIS
Sbjct: 371 NCHGQLGLGDSTDRLVPVLVPS-MTKKNLSEIACGFHHLVAIS 412



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 159/349 (45%), Gaps = 48/349 (13%)

Query: 92  VYATGLNDFGQLGIS---ENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           V+A G N  G+LG S   E +  SL + LR    +K +V+++ G   S  +T +G++Y  
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLR----RKRIVKVAAGSETSYFLTEEGKVYCC 97

Query: 148 GKNSNGQLGLGK---KAAKVIPIPTKVECLSGIFTKQAAL------GFEQSVAVTGGGKV 198
           G NS GQL        A +     + +E + G+      +      G E  + VT  G+V
Sbjct: 98  GLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV 157

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFLHSACIDEN 256
            S G    G+LG G           +++ +P L  ++ L+ V+V  A+  + HS  +  +
Sbjct: 158 YSCGCNNHGQLGLG-----------STKMSPSLLLVESLKHVRVLSASCSYHHSVVVSSD 206

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWG 313
           G  + FG     ++      +   P  + +LP    V    CG YHT  LT  G +++ G
Sbjct: 207 GSAFSFGLNDCGQLGIGTRPNQLLPHRV-ELPSPHLVRLAACGQYHTIFLTEEGMVFSCG 265

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
            N NG LG+GS    + P  +     E P   ++CG+ HT  + E GK+ T+G+      
Sbjct: 266 KNLNGQLGLGSRSSTNVPTLI-AALQERPASMIACGYSHTCVVLEDGKLFTFGY------ 318

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 +  GQLG G+      P  V    NVK +++SCG + T  L E
Sbjct: 319 ------NHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSE 361



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 51/97 (52%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G    G+LGLG  +S   P+         +  ++CG   T  L+E+G +++ G N  GQ
Sbjct: 316 FGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQ 375

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           LG+ ++    +  L  S  KK + +I+ G+HH  AI+
Sbjct: 376 LGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412


>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 818

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 171/378 (45%), Gaps = 39/378 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ +YG+LGLG  + R  P    +       A++ G  H+L +   G +++ G ND GQ
Sbjct: 296 WGDNEYGQLGLGDTDERHAPEQVGS--NTDWAAISAGRRHSLAVKADGSLWSWGYNDSGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +    +  P ++ G   +   +S G  HS A+  DG L +WG N  GQLGLG   +
Sbjct: 354 LGLGDTADRN-APEQV-GADTDWDLVSAGGEHSLAVKADGTLMVWGLNHLGQLGLGDTVS 411

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+P      SGI       G   +VAV   G + +WG    G+LG       LG +R
Sbjct: 412 RDAPVP----IASGI---ALVAGRNHTVAVNPDGTLRAWGDNEYGQLG-------LGVMR 457

Query: 223 STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               Y     + + G     +    F HS  + ++G ++ +G     ++   + +    P
Sbjct: 458 ----YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRATP 513

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +        V    YHT  + + G L+ WG N +G LG+   +  H+PERV    S++
Sbjct: 514 EQVGSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDTNDRHTPERVG---SDT 570

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
               VS G  HT+A+     L W WG +H           GQLG G+  D + P  V  G
Sbjct: 571 DWATVSVGQSHTSAVKPDGTL-WAWGWNH----------YGQLGLGDTSDRLSPEQV--G 617

Query: 402 ENVKALQVSCGFNHTGAL 419
                L VS G +HT A+
Sbjct: 618 GESNWLAVSTGLHHTVAV 635



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 167/382 (43%), Gaps = 42/382 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDF 100
           WG+ +YG+LGLG +      V  S     S  A   GG+  H+L L + G ++A G N++
Sbjct: 443 WGDNEYGQLGLGVMR---YIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNY 499

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+ +    +  P ++ G   +   ++   +H+ A+  DG L+ WG+NS+GQLGL   
Sbjct: 500 GQLGLGDTDDRAT-PEQV-GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQLGLSDT 557

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +    P +V   +   T   ++G   + AV   G + +WG    G+LG G  S     
Sbjct: 558 NDR--HTPERVGSDTDWAT--VSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD---- 609

Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                    RL  E  G +    A   G  H+  +  +G ++ +G     ++     +  
Sbjct: 610 ---------RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDR 660

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +        V   GY T  + + G L+ WG N NG LG+G  D  ++P +V    
Sbjct: 661 HAPVQVGSDTDWAAVSASGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQVG--- 717

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           +++    VS G  HT A  E   L W WG +H           GQLG G+  +   P  V
Sbjct: 718 NDADWAAVSTGLFHTLAFKEDDTL-WAWGRNH----------DGQLGLGDTDNRDAP--V 764

Query: 399 NFGENVKALQVSCGFNHTGALL 420
             G       VS G  HT A +
Sbjct: 765 QVGNETDWSTVSGGGYHTLATM 786



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 177/450 (39%), Gaps = 71/450 (15%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFA-------ALWGNGDYGRLGLGSLESRWRPVVCSAF 68
            D  +  ++G    W + +  R           LW  G  GR+GLG    R  P      
Sbjct: 161 DDRDVPEQVGTDSDWTAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGV- 219

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
             +   AL+ GG+HT+ +   G ++A G N+ GQLG+ +   +   P ++        +I
Sbjct: 220 -DNDWIALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD-TNHHYTPTQVGTDTDWAKKI 277

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
           S G  HS A+  DG L+ WG N  GQLGLG    +  P         G  T  AA+  G 
Sbjct: 278 SAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQV------GSNTDWAAISAGR 331

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK---------ELEG 237
             S+AV   G + SWG   SG+LG G  +      +  ++    L+          + +G
Sbjct: 332 RHSLAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVGADTDWDLVSAGGEHSLAVKADG 391

Query: 238 V----------------------KVKIAA-----AGFLHSACIDENGRVYIFGDRAVDKM 270
                                   V IA+     AG  H+  ++ +G +  +GD    ++
Sbjct: 392 TLMVWGLNHLGQLGLGDTVSRDAPVPIASGIALVAGRNHTVAVNPDGTLRAWGDNEYGQL 451

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                 +   PS          V  G + H+  L   G L+ WG N  G LG+G  D   
Sbjct: 452 GLGVMRYIVTPSQTVTGSAWAAVNGGSFNHSLGLRDDGTLWAWGRNNYGQLGLGDTDDRA 511

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           +PE+V      + V+  S    HT A+     L W W          G +S GQLG  + 
Sbjct: 512 TPEQVGSHTDWAAVNAASY---HTLAVKNDGTL-WAW----------GRNSSGQLGLSDT 557

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            D   P  V  G +     VS G +HT A+
Sbjct: 558 NDRHTPERV--GSDTDWATVSVGQSHTSAV 585



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%), Gaps = 48/360 (13%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V C+AF       LA G  HT+ +   G ++A G N +G+LG+ +     + P ++ G  
Sbjct: 120 VECTAF-----PVLAAGDDHTVAVKADGTLWAWGRNGYGRLGLGDTDDRDV-PEQV-GTD 172

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            +   +S G  H+ A+  +G L+ WG++  G++GLG    +  P         G+     
Sbjct: 173 SDWTAVSAGRDHTVAVKANGTLWAWGRS--GRIGLGDSGDRDEPEQV------GVDNDWI 224

Query: 183 AL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           AL  G   +VAV   G + +WG   +G+LG G          +   YTP  +        
Sbjct: 225 ALSAGGSHTVAVKADGTLWAWGRNNAGQLGLGD---------TNHHYTPTQVGTDTDWAK 275

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           KI+A G  HS  +  +G ++ +GD    ++   + +    P  +        +  G  H+
Sbjct: 276 KISA-GRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDWAAISAGRRHS 334

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
             + + G L++WG N++G LG+G     ++PE+V    +++  D VS G +H+ A+ ++G
Sbjct: 335 LAVKADGSLWSWGYNDSGQLGLGDTADRNAPEQVG---ADTDWDLVSAGGEHSLAVKADG 391

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++ W            G +  GQLG G+ V    P  +  G     + +  G NHT A+
Sbjct: 392 TLMVW------------GLNHLGQLGLGDTVSRDAPVPIASG-----IALVAGRNHTVAV 434



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 168/384 (43%), Gaps = 45/384 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG   SR  PV  +     S  AL  G  HT+ +   G + A G N++G
Sbjct: 395 VWGLNHLGQLGLGDTVSRDAPVPIA-----SGIALVAGRNHTVAVNPDGTLRAWGDNEYG 449

Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+   + Y + P + ++G     V   + ++HS  +  DG L+ WG+N+ GQLGLG  
Sbjct: 450 QLGLGV-MRYIVTPSQTVTGSAWAAVNGGS-FNHSLGLRDDGTLWAWGRNNYGQLGLGDT 507

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +  P         G  T  AA+      ++AV   G + +WG   SG+         L
Sbjct: 508 DDRATPEQV------GSHTDWAAVNAASYHTLAVKNDGTLWAWGRNSSGQ---------L 552

Query: 219 GFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           G   +   +TP R+  + +   V +   G  H++ +  +G ++ +G     ++   + + 
Sbjct: 553 GLSDTNDRHTPERVGSDTDWATVSV---GQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSD 609

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +        V  G +HT  + + G L+ WG N  G LG+G     H+P +V   
Sbjct: 610 RLSPEQVGGESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGSD 669

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
              + V   + G++  A  ++G +  W            G ++ GQLG G+  +   P  
Sbjct: 670 TDWAAV--SASGYRTLAVKADGTLWAW------------GENNNGQLGLGDTDNRNTPAQ 715

Query: 398 VNFGENVKALQVSCGFNHTGALLE 421
           V  G +     VS G  HT A  E
Sbjct: 716 V--GNDADWAAVSTGLFHTLAFKE 737



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 24/296 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL     R  P    +        ++ G +HT  +   G ++A G N +GQ
Sbjct: 544 WGRNSSGQLGLSDTNDRHTPERVGS--DTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQ 601

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +     L P ++ G +   + +STG HH+ A+  DG L+ WG N  GQLGLG  + 
Sbjct: 602 LGLGD-TSDRLSPEQVGG-ESNWLAVSTGLHHTVAVKTDGTLWAWGWNVRGQLGLGHTSD 659

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+    +     +   +A G+ +++AV   G + +WG   +G+LG G          
Sbjct: 660 RHAPVQVGSDT---DWAAVSASGY-RTLAVKADGTLWAWGENNNGQLGLGD--------- 706

Query: 223 STSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           + +  TP  +    G     AA   G  H+    E+  ++ +G     ++   + ++   
Sbjct: 707 TDNRNTPAQV----GNDADWAAVSTGLFHTLAFKEDDTLWAWGRNHDGQLGLGDTDNRDA 762

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P  +        V  GGYHT    S G L  WG N +G LG  ++     P+ V G
Sbjct: 763 PVQVGNETDWSTVSGGGYHTLATMSDGTLRAWGLNTSGQLGQRTM-WFDQPQEVPG 817


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 150/327 (45%), Gaps = 30/327 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
            G  +YG L LG      +    S F   S++++A G    + L + G V+  GLN  GQ 
Sbjct: 3139 GQNNYGELCLGHCNPTNKLERASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGLNKSGQC 3198

Query: 104  GISENIGYSLEPLRI---SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GI       + P  I   SG+   +V  S G  H  AI+ DG +Y WG N  GQLGLG  
Sbjct: 3199 GIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTT 3258

Query: 161  AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
             +K    P  +E L    F   AA+ +  S  V+  G +L++G   SG+LG  H Q    
Sbjct: 3259 VSKS-HTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQH--- 3314

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    ++TP+L++ L   KV   A G  H+  I ++G VY FG     ++      +
Sbjct: 3315 --------QHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQN 3366

Query: 278  ARRPSLISKLPYSE-----------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             + P L+   P              +V CG YHT  +   G++ TWG N+ G LGIGS +
Sbjct: 3367 TKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKE 3426

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHT 353
                 + V  P + S V + SCG  HT
Sbjct: 3427 HKSIAQFVPLPLT-SRVKRASCGCYHT 3452



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 156/332 (46%), Gaps = 28/332 (8%)

Query: 90  GCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           G +Y+ G N +G+LG+ ++I  + L  + + G    + Q+ +G    + +T DG +   G
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWD-HIRQVVSGNEILAILTSDGVVLTCG 406

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGGS 206
            N +GQ G G    +V+ +   ++ L     K   A+ G E  +A+T  G   SWG    
Sbjct: 407 LNKSGQCGHGNFDERVMLL-RPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDR 465

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH    + L        Y P+LI+ ++  K+K AA  + HSA +  +G +Y FG   
Sbjct: 466 GQLGHENVGTKL--------YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMND 517

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++      H   P L+  L   +   V CG YH  + T  GE++T G N++G LG+G 
Sbjct: 518 CGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGH 577

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
              +  P +V  P     V  V+CG+ H  AI+    LT+ +          G +  GQL
Sbjct: 578 NKQVKVPTQVVLP--NELVCFVACGYYHATAITSTG-LTYSF----------GRNDYGQL 624

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           G G+ +    P  +    N + +  +CG  HT
Sbjct: 625 GIGSKIHQNIPIALTISSNTRMVHAACGCYHT 656



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 26/323 (8%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ G G+ + R    RP+   A   H +K +  + G  H + +T+TG  Y+ G ND GQL
Sbjct: 411 GQCGHGNFDERVMLLRPI--QALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQL 468

Query: 104 GISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G  EN+G  L  P  I  +K K++   +  YHHS+ ++V GELY +G N  GQLGL    
Sbjct: 469 G-HENVGTKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQ 527

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  V+ L G      + G    V  T  G+V + G    G+LG G    +    
Sbjct: 528 HQ--STPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQV---- 581

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  +  L    V   A G+ H+  I   G  Y FG     ++      H   P
Sbjct: 582 -----KVPTQVV-LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIP 635

Query: 282 SLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSPERVQGP 337
             ++    +  V   CG YHT +++  G+++ +G N  G LG  G+ D +L  P +V+  
Sbjct: 636 IALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPE 695

Query: 338 FSESPVDQVSCGWKHTAAISEGK 360
            +      ++ G+  T+ I E K
Sbjct: 696 KNMRRCLHIAAGFYTTSLIVERK 718



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 133/287 (46%), Gaps = 17/287 (5%)

Query: 49   GRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
            G+ G+G+ + R     P+   +    ++ A + G  H L ++  G VY+ G ND GQLG+
Sbjct: 3196 GQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGL 3255

Query: 106  SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
               +  S  P  I  L+++  +   +  YHHS+ ++ +G+L  +G N +GQLGL     +
Sbjct: 3256 GTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQ 3315

Query: 164  VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFL 221
                P  VE LS     + A G   +VA+   G V S+G    G+LG  H Q + +   +
Sbjct: 3316 --HTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLV 3373

Query: 222  R-STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            +   +  TP L    + V+V     G+ H+  I E G+V  +G     ++      H   
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQV---YCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSI 3430

Query: 281  PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               +  LP +  V    CG YHT +L   G    +G N  G LG+ S
Sbjct: 3431 AQFV-PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 20/231 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG  D G+LGLG+  S+     V+ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 3245 WGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDS 3304

Query: 101  GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+ ++  +   P  +  L  + V +++ G +H+ AI  DG++Y +GKN  GQLGL  
Sbjct: 3305 GQLGL-DHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGLSH 3363

Query: 160  KAAKVIPIPTKV------ECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
                 +P+  K+        L  +    Q   G+  +V +   GKV++WG    G+LG G
Sbjct: 3364 TQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIG 3423

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +       +S +++ P  +      +VK A+ G  H+  +  NGR  +FG
Sbjct: 3424 SKEH-----KSIAQFVPLPLTS----RVKRASCGCYHTLLLLVNGRPMVFG 3465



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 127/264 (48%), Gaps = 18/264 (6%)

Query: 1   MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESR- 59
           ML R + A+  + +K    + +  G C+  I+ T     A  WG  D G+LG  ++ ++ 
Sbjct: 423 MLLRPIQALRSHRVKY---INASNG-CEHLIAIT-DTGLAYSWGYNDRGQLGHENVGTKL 477

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           + P +  + ++  +K+ A    H+  ++ +G +Y  G+ND GQLG+      S   L  +
Sbjct: 478 YLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKA 537

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            L   V  +S G +H    T+ GE++  GKN +GQLGLG    K + +PT+V  L     
Sbjct: 538 LLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHN--KQVKVPTQV-VLPNELV 594

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G+  + A+T  G   S+G    G+LG G +           +  P  +      +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK---------IHQNIPIALTISSNTR 645

Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
           +  AA G  H+  + ++G+V++FG
Sbjct: 646 MVHAACGCYHTLLMSDSGQVFVFG 669



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 143/345 (41%), Gaps = 89/345 (25%)

Query: 92   VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGK 149
            +++ G N++G+L +   N    LE  R S    + +Q I+ G      +  DG ++  G 
Sbjct: 3135 IFSCGQNNYGELCLGHCNPTNKLE--RASFFSYKSIQSIAGGNEVLVVLMKDGAVFTCGL 3192

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
            N +GQ G+G    ++I +P+ +  LSGI     A   G E  +A++  G V SWG    G
Sbjct: 3193 NKSGQCGIGNFDERLI-VPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRG 3251

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            +LG G   S          +TPR+I+ L E   +  AA  +                   
Sbjct: 3252 QLGLGTTVS--------KSHTPRVIESLREKYFITFAAVSY------------------- 3284

Query: 267  VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                                           +H+ V+++ G+L T+G N++G LG+    
Sbjct: 3285 -------------------------------HHSAVVSNNGDLLTFGMNDSGQLGLDHTQ 3313

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
              H+P+ V+   S   V +V+CG  HT AI  +G + ++G             +  GQLG
Sbjct: 3314 HQHTPQLVET-LSSQKVGRVACGLYHTVAIVDDGDVYSFG------------KNEYGQLG 3360

Query: 386  HGNDVDYIHPTIVNFGENV---------KALQVSCGFNHTGALLE 421
              +  +   P +V               KA+QV CG+ HT  +LE
Sbjct: 3361 LSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILE 3405



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 19/186 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            +G  D G+LGL   + +  P +        +  +ACG  HT+ + + G VY+ G N++GQ
Sbjct: 3299 FGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYSFGKNEYGQ 3358

Query: 103  LGISENIGYSLEPL-------RISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            LG+S      +  L       R   L    + VQ+  GY+H+  I   G++  WG+N  G
Sbjct: 3359 LGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYG 3418

Query: 154  QLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
            QLG+G K     A+ +P+P           K+A+ G   ++ +   G+ + +G    G+L
Sbjct: 3419 QLGIGSKEHKSIAQFVPLPLTSR------VKRASCGCYHTLLLLVNGRPMVFGRNNKGQL 3472

Query: 210  GHGQES 215
            G    S
Sbjct: 3473 GVASRS 3478



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 1/128 (0%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D+G+LGLG  +    P          +  +ACG  H   +T TG  Y+ G ND+GQL
Sbjct: 566 GKNDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQL 624

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           GI   I  ++           +V  + G +H+  ++  G+++++G+N+ GQLG       
Sbjct: 625 GIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDS 684

Query: 164 VIPIPTKV 171
           ++P+P KV
Sbjct: 685 LLPVPLKV 692


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 176/392 (44%), Gaps = 44/392 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P +   F   S+ +LACGGAH + LT  G   + G  + GQ
Sbjct: 23  WGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQ 82

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +  +L P  ++ L    +  +S G+ HS  ++  G ++  G  S GQLG G  A
Sbjct: 83  LGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNA 142

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +   P+  KV C   +   Q A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 143 SHCSPV--KVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P+++   EGV++   AA   HSA +  +G VY +G        F+    A  P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRG------FKGFEDAHVP 247

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL----GIGSIDVLHSPERVQGP 337
             ++      +V  G  H   ++  GE+Y  G N  G L     IG     H P+  +  
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAK--HFPDLREFN 305

Query: 338 FSESP------VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             + P      +  ++ G +H+  ++E G+I TWGWG              GQLG G+  
Sbjct: 306 LEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGDTR 353

Query: 391 DYIHPTIVNFGENVK---ALQVSCGFNHTGAL 419
           D   P  V+   ++    +++V CG   T A+
Sbjct: 354 DQTSPVTVSLDYDLNEAASIRVFCGSGFTFAV 385



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 151/333 (45%), Gaps = 33/333 (9%)

Query: 40  AALWGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  WG G+ G+LG G + S    P   ++ + + +  ++ G +H+ F+++TG V+  G  
Sbjct: 72  ALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDG 131

Query: 99  DFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            FGQLG  +N  +   P+++S      V Q++ G  HS  +    ++Y +G    GQLG+
Sbjct: 132 SFGQLGHGDNASH-CSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGV 190

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
                K + +P  V    G+     A   + S AV+  G V +WG G  G     +++ +
Sbjct: 191 SNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGRGFKGF----EDAHV 246

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEG 275
              L S+  +T               A G+ H+  +   G VY+ G   +  +  L   G
Sbjct: 247 PQCLNSSLNFTK-------------VALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIG 293

Query: 276 NHARRPSL----ISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
                P L    + K+P  +     ++  G  H+ ++T  GE+ TWG  E+G LG+G   
Sbjct: 294 PAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTR 353

Query: 327 VLHSPERVQGPF--SESPVDQVSCGWKHTAAIS 357
              SP  V   +  +E+   +V CG   T A++
Sbjct: 354 DQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVT 386



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 14/228 (6%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F    G+G +G+LG G   S   PV  S F    +  +ACG  H+L L +   VY  G  
Sbjct: 124 FVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSG 183

Query: 99  DFGQLGISENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG+S +   S+  P  +SG +  E+V  +    HS+A++VDG +Y WG+       
Sbjct: 184 KRGQLGVSNDRVKSVNVPKVVSGFEGVEIVGTAANGDHSAAVSVDGHVYTWGR------- 236

Query: 157 LGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G K  +   +P   +CL S +   + ALG+  ++A++G G+V   G    G L   Q  
Sbjct: 237 -GFKGFEDAHVP---QCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNI 292

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     E+    +  L+G K+   AAG  HS  + E+G +  +G
Sbjct: 293 GPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVTEHGEIKTWG 340



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 111/229 (48%), Gaps = 16/229 (6%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG  + GQLG      +  P       LS I     A G    +A+T  GK LSWG 
Sbjct: 20  VWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI--SSLACGGAHVIALTSAGKALSWGR 77

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G SG+LGHG+       + S + Y P+ +  L+G  +   +AG+ HS  + + G V+  G
Sbjct: 78  GNSGQLGHGE-------VVSNTLY-PKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           D +  ++   +      P  +S     +  +V CG  H+ VL  G ++Y +GS + G LG
Sbjct: 130 DGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLG 189

Query: 322 IGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           + +  +  ++ P+ V G F    +   +    H+AA+S +G + TWG G
Sbjct: 190 VSNDRVKSVNVPKVVSG-FEGVEIVGTAANGDHSAAVSVDGHVYTWGRG 237



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 25/149 (16%)

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI--DVLHSPERV-- 334
           P L+ +   S    + CGG H   LTS G+  +WG   +G LG G +  + L+ P+ V  
Sbjct: 42  PQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLY-PKAVTS 100

Query: 335 -QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
             G F    +  VS GW H+  +S+ G + T G G            S GQLGHG++  +
Sbjct: 101 LDGYF----ITHVSAGWSHSGFVSDTGFVFTCGDG------------SFGQLGHGDNASH 144

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V+   ++   QV+CG  H+  LL+
Sbjct: 145 CSPVKVSCFVDLHVAQVACGMRHSLVLLK 173


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 169/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKNGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVTAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT+ G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 176/363 (48%), Gaps = 32/363 (8%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG LE      P    +F    +  +ACG  HTLF+ + G V + G ND+
Sbjct: 14  WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73

Query: 101 GQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  I  L ++ V+Q S+G  HS+ +T  G+++ WG N + QLG G+
Sbjct: 74  GQLGHEKPCK---RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ 130

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    IP  V  L+     Q A G   +V +T  G++ +WG+       HGQ    LG
Sbjct: 131 VDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSN-----NHGQ----LG 181

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T +  P+ +  + G+ +   AAG  H+  +  +G ++ +G  +  ++   +     
Sbjct: 182 LANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRG 241

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+L+  L       + CG  H+  LT  G ++T+G+   G LG  + +    P +V   
Sbjct: 242 APTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLPRKV-FE 300

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S V Q++CG KH+ A   S G++  +G GG+            GQLG G+ V+ + P
Sbjct: 301 LMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGN------------GQLGTGSTVNRMSP 348

Query: 396 TIV 398
            +V
Sbjct: 349 AMV 351



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 168/369 (45%), Gaps = 19/369 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    +   RP +  +  + ++   + G  H+  LT+ G V+  G N+  QL
Sbjct: 69  GNNDYGQLG--HEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQL 126

Query: 104 GISENIGYSLE-PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G  +    S   P  + GL   +VVQ++ G  H+  +T  G++Y WG N++GQLGL  K 
Sbjct: 127 GRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGLANKT 186

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  V C+SG+   + A G + ++ +T  G + +WG    G+LG G +       
Sbjct: 187 PQ--NEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQD----- 239

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P L+K L    +   A G  HS  +  +G V+ FG     ++     N+   P
Sbjct: 240 ----RGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNELLP 295

Query: 282 SLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + +L  S   ++ CG  H+   + S G +Y +G   NG LG GS     SP  V+GPF
Sbjct: 296 RKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGPF 355

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWG-WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
                + V  G  H +   +  ++    + G   TF     +S     H   ++ +  +I
Sbjct: 356 VAFGAEVVDKGAIHFSQHGQPHMVVRHLYAGGDQTFIYATAASCKVPPHDCRINPLVQSI 415

Query: 398 VNFGENVKA 406
           V   ++V A
Sbjct: 416 VRISKDVVA 424



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 131/278 (47%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  ++GQLGLG    + + +P ++     +     A G + ++ V   G+VLS G    
Sbjct: 14  WGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGNNDY 73

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +               P LI  L    V  A++G  HS  + + G+V+ +G   
Sbjct: 74  GQLGHEKPCK-----------RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNE 122

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +++   + + A    P ++  L   +  +V CG  HT  LT+ G++YTWGSN +G LG+
Sbjct: 123 DNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
            +    + P+ V    S  P+ +V+ G  H   ++  G +  WG             +S 
Sbjct: 183 ANKTPQNEPQWVSC-ISGLPIVRVAAGADHNLVLTISGALFAWGC------------NSF 229

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG G+D D   PT+V    N     ++CG +H+ AL
Sbjct: 230 GQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLAL 267



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 129/299 (43%), Gaps = 29/299 (9%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           EVV I+ G  H+  +  DG +   G N  GQLG  K   +    P  ++ L      QA+
Sbjct: 45  EVVHIACGLQHTLFVKKDGRVLSCGNNDYGQLGHEKPCKR----PALIDSLGERNVLQAS 100

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G + S  +T  G+V +WG+    +LG GQ       + S S   PR+++ L   KV   
Sbjct: 101 SGTKHSTVLTDAGQVFTWGSNEDNQLGRGQ-------VDSASTSIPRMVRGLADHKVVQV 153

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP---SLISKLPYSEEVVCGGYHT 300
           A G  H+  +   G++Y +G     ++          P   S IS LP    V  G  H 
Sbjct: 154 ACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVR-VAAGADHN 212

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
            VLT  G L+ WG N  G LG+G      +P  V+       +  ++CG  H+ A++ +G
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKT-LRNQGICALACGDDHSLALTRDG 271

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            + T+G G              GQLGH    + + P  V         Q++CG  H+ A
Sbjct: 272 GVFTFGAGMY------------GQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIA 318


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 178/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +     +P +I  L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG---HDCEGSKPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG  HT A   S G I  +G G            + GQLG G+  +   
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTGHTCNVKC 337

Query: 395 PTIV 398
           P+ V
Sbjct: 338 PSPV 341



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 33/332 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  NI   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P ++  L+G      A G   S+A++  G++ SWGAG  G+LG   
Sbjct: 65  QLGHDCEGSK----PEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           SP  V+   S+  V  +SCG +HTA +++ G + T+G G            S GQLGH +
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDS 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             D ++P  V      +  Q++CG +HT A +
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 122/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     ++P P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P  I  L G  +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHDCEGS-----------KPEQIGALAGQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             +S 
Sbjct: 173 KECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWG------------KNSS 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 152/304 (50%), Gaps = 33/304 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV+++ G  HS+ +T  G LY++G N  GQLGLG    K +  P+ V+ L     ++ A 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLG--HTKSLNKPSFVKPLKPEKVRKVAC 97

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++  +  GK+ S+G    G+LGH         +   +E  P+ I+ +  +++K  A
Sbjct: 98  GRNHTIVYSESGKLFSFGCNEDGQLGH---------VDKENELLPKEIESIPQMEIKQIA 148

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTC 301
            G  HS  + E+G VY++G+    ++   E       SL  KL + +EVV   CG YHT 
Sbjct: 149 CGTYHSIILSEDGDVYVWGNNNEGQLGLGE---EVENSLPKKLKFKKEVVSVSCGYYHTA 205

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           ++T  G LYT+G NE G LG+ S  + ++  P+ V  P        VSCG +HT AI+ +
Sbjct: 206 LVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQ 265

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTG 417
           G    WG G            S GQLGHG   ++   P  +      K + VSCG +HT 
Sbjct: 266 GHCYAWGDG------------SQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTA 313

Query: 418 ALLE 421
            + E
Sbjct: 314 VVTE 317



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 174/353 (49%), Gaps = 35/353 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHH 134
           +ACG  H+  +TE+G +Y  G ND+GQLG+      + +P  +  LK E V +++ G +H
Sbjct: 43  MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLN-KPSFVKPLKPEKVRKVACGRNH 101

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   +  G+L+ +G N +GQLG   K  ++  +P ++E +  +  KQ A G   S+ ++ 
Sbjct: 102 TIVYSESGKLFSFGCNEDGQLGHVDKENEL--LPKEIESIPQMEIKQIACGTYHSIILSE 159

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACI 253
            G V  WG    G+LG G+E              P+ +K + E V V   + G+ H+A +
Sbjct: 160 DGDVYVWGNNNEGQLGLGEE---------VENSLPKKLKFKKEVVSV---SCGYYHTALV 207

Query: 254 DENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
             +G +Y FG+  + K+       ++   P  ++    ++E   V CG  HT  +T  G 
Sbjct: 208 TRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGH 267

Query: 309 LYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
            Y WG    G LG G+ +  ++ P++++   S      VSCG  HTA ++E GK+ T+G 
Sbjct: 268 CYAWGDGSQGQLGHGTKLLEVNEPKQIK-KLSGQKCISVSCGESHTAVVTESGKVFTFG- 325

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G HG   +      G+    N  D ++ +  N+      + VSCG  HT  L
Sbjct: 326 DGRHGKLGQ------GEDSFSNSFDPVYLSRFNY---FNVVYVSCGGCHTLVL 369



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 147/318 (46%), Gaps = 65/318 (20%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG  +S  +P      +   ++ +ACG  HT+  +E+G +++ G N+ G
Sbjct: 61  VFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFGCNEDG 120

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  +     L P  I  + + E+ QI+ G +HS  ++ DG++Y+WG N+ GQLGLG++
Sbjct: 121 QLGHVDKEN-ELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEE 179

Query: 161 AAKVIPIPTK-------VEC-------------------------------LSGIFTKQA 182
               +P   K       V C                               LS     Q+
Sbjct: 180 VENSLPKKLKFKKEVVSVSCGYYHTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQS 239

Query: 183 -------------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
                        + G   +VA+T  G   +WG G  G+LGHG +      L   +E  P
Sbjct: 240 VAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTK------LLEVNE--P 291

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKL 287
           + IK+L G K    + G  H+A + E+G+V+ FGD    K+   E + +    P  +S+ 
Sbjct: 292 KQIKKLSGQKCISVSCGESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRF 351

Query: 288 PYSEEVV--CGGYHTCVL 303
            Y   V   CGG HT VL
Sbjct: 352 NYFNVVYVSCGGCHTLVL 369


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 113/338 (33%), Positives = 159/338 (47%), Gaps = 31/338 (9%)

Query: 92  VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +++ G N++G+L +   N    LE +      K +  I+ G    + +  DG ++  G N
Sbjct: 471 LFSCGQNNYGELCLGHCNSTSKLEHVPFFS-AKAIRDIAGGNEVLAVVMKDGAVFTCGLN 529

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +GQ G G    +VI I T V  LSGI      AA G E  +AV   G V SWG    G+
Sbjct: 530 KSGQCGNGTFEERVI-IATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQ 588

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LG G  S+I      +  +TPR+I  L E   +  AA  + HSA +  NG + +FG    
Sbjct: 589 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640

Query: 268 DKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++      H   P L+  L      EV CG YHT  +TSGGE+Y++G N+ G LG+G  
Sbjct: 641 GQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHA 700

Query: 326 DVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 382
             +  P  V+    ES   +  VSCG+ HT  ISE GK++TW            G +  G
Sbjct: 701 RNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITW------------GRNDYG 748

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           QLG G+         V    + K    SCG  HT  L+
Sbjct: 749 QLGIGSKDHKNSAQYVPLPLSSKIKTASCGCYHTLILM 786



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 135/287 (47%), Gaps = 23/287 (8%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G+ E R     PV   +    ++ A A G  H L +   G VY+ G ND GQLG+
Sbjct: 532 GQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGL 591

Query: 106 SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
              I  S  P  I  L+++  +   +  YHHS+ ++ +GEL M+G N  GQLGL     +
Sbjct: 592 GSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQ 651

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+ LS     + A G   ++A+T GG+V S+G    G+LG G   ++      
Sbjct: 652 H--TPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNM------ 703

Query: 224 TSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                P L+K   G    K+   + G+ H+  I E G++  +G     ++     +H   
Sbjct: 704 ---KVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNS 760

Query: 281 PSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              +  LP S ++    CG YHT +L S G +  +G N  G LG GS
Sbjct: 761 AQYV-PLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 18/227 (7%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+LGLGS   +S    ++ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 581 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDC 640

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ ++  +   P  +  L  +V+ +++ G +H+ AIT  GE+Y +GKN  GQLGLG 
Sbjct: 641 GQLGL-DHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGH 699

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             A+ + +PT V+   G   ++    + G+  +V ++  GK+++WG    G+LG G +  
Sbjct: 700 --ARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDH 757

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                +++++Y P  +      K+K A+ G  H+  +  NGRV +FG
Sbjct: 758 -----KNSAQYVPLPLSS----KIKTASCGCYHTLILMSNGRVMVFG 795



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G  D G+LGL   + +  P +  +     +  +ACG  HT+ +T  G VY+ G ND+G
Sbjct: 634 MFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYG 693

Query: 102 QLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+       +  L  + L    +++V +S GY+H+  I+  G+L  WG+N  GQLG+G
Sbjct: 694 QLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIG 753

Query: 159 ----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
               K +A+ +P+P   +       K A+ G   ++ +   G+V+ +G    G+LG G  
Sbjct: 754 SKDHKNSAQYVPLPLSSK------IKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSR 807

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           +     L S     P     L   +V   AAGF  S
Sbjct: 808 T-----LPSADLPLPVPSNSLANDEVVRIAAGFYSS 838


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/414 (28%), Positives = 194/414 (46%), Gaps = 33/414 (7%)

Query: 15  KQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK 74
           K D KL  +LG+    +S          WG    G LG G       P V  A     ++
Sbjct: 350 KADGKLMLELGLFGDRVSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIR 409

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYH 133
            +ACG  HTL ++  G +++ G    G+LG+ +NI     PL+I   +   +  +S    
Sbjct: 410 TVACGTEHTLAVSVNGEMFSWGCGRGGKLGL-KNILDRYMPLKIGAFENVNITFVSCNEL 468

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS+++T  GELY +G+ S   LG   +  K   +P KV+  +    K  + G E ++A+ 
Sbjct: 469 HSASVTESGELYTFGR-SGPHLGYTTEDRKQ-AVPRKVDFSTANKIKAVSCGLEFTIALN 526

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ S+G    G+LG G  + I           P LIK L GV++   + G  H   +
Sbjct: 527 SEGELYSFGKNDCGQLGAGHFNDI---------EEPYLIKHLNGVRISKVSCGSKHVGAV 577

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
             NG V+++G     ++   +      P       ++EE+    CGG HT VL+  G +Y
Sbjct: 578 TVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVY 637

Query: 311 TWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
            +G+ ++G LG+    +   + +P  +  P + + + +V CG +HTAA++E G + TWG 
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMP-NNTKIAKVDCGIEHTAAVTESGCLYTWGN 696

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           G            S G+LGHG+  D   PT+V      +   ++CG  HT A +
Sbjct: 697 G------------SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACV 738



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 30/343 (8%)

Query: 86  LTETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + E  C +Y  G +  G LG  E        +  + L +++  ++ G  H+ A++V+GE+
Sbjct: 368 VKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSVNGEM 427

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG    G+LGL     + +P+  K+     +     +     S +VT  G++ ++G  
Sbjct: 428 FSWGCGRGGKLGLKNILDRYMPL--KIGAFENVNITFVSCNELHSASVTESGELYTFGRS 485

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           G   LG+  E           +  PR +      K+K  + G   +  ++  G +Y FG 
Sbjct: 486 GP-HLGYTTEDR--------KQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGK 536

Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++     N    P LI  L      +V CG  H   +T  G+++ WGSNE G LG 
Sbjct: 537 NDCGQLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGT 596

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             ++    P      F    +  + CG  HT  +S  G +  +G G S            
Sbjct: 597 DKLEAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQS------------ 644

Query: 382 GQLGHG--NDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLG        YI +P I++   N K  +V CG  HT A+ E
Sbjct: 645 GQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTE 687



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 42  LWGNGDYGRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           ++GNG  G+LG+   ++      P + S      +  + CG  HT  +TE+GC+Y  G  
Sbjct: 638 VFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNG 697

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
             G+LG  ++    +  L  S   K+V  I+ G +H++A  +
Sbjct: 698 SRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVI 739


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 176/392 (44%), Gaps = 44/392 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG GD GRLG    + R+ P V  +    ++  +ACGG+HT+ L   G V++ G    G
Sbjct: 166 LWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQG 225

Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG   N+     PL I G  ++  VV ++   +HS+ I+ DG LY WGK +   LG   
Sbjct: 226 CLG-HGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPFLGYMD 283

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +      P  V+ L G    Q A G   ++ +   G+V S+G    G LG G + +I  
Sbjct: 284 DSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAIT- 342

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P ++  L  V +   + G  HSA IDE+G ++++G  A  ++         
Sbjct: 343 --------KPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQL-----GQGE 387

Query: 280 RPSLISKLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHS 330
             SL S  P +       E+V CG  HT  +T+ G  Y WG N +   G+ S     L S
Sbjct: 388 PKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSS 447

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN- 388
           P  +  P    P  Q++CG   T  ++  G++ TWG   S            GQLG+G  
Sbjct: 448 PRGIVLPSGIRPT-QINCGANFTVLVTSIGQLFTWGCNMS------------GQLGNGEA 494

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
              +  P  V      +   V+CG +H G L+
Sbjct: 495 KKTFSQPMPVESLSEKRVKMVACGEDHIGCLV 526



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 149/321 (46%), Gaps = 35/321 (10%)

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG--ELYMWGKNSNGQLGLGKKAAKV 164
           E +   L  +R S + ++ +++  G   +  +  D   +LY+WG    G+LG   K  K 
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLEVQLGTIKTKVLLKDNSCDLYLWGGGDRGRLG--HKDDKP 182

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
             +P  VE L G      A G   ++A+   G+V SWGAG  G LGHG        LR  
Sbjct: 183 RFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGN-------LR-- 233

Query: 225 SEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RP 281
             Y+P +I   L  V V   A    HSA I E+G +Y +G +A   + + + +  +  +P
Sbjct: 234 DRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWG-KAGPFLGYMDDSVTKQTKP 292

Query: 282 SLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            L+  L  +   +V CG  HT V+   G +Y++G N+ G LG G    +  P  V    S
Sbjct: 293 RLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHDKAITKPTMVPNLVS 352

Query: 340 ESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
              + +VSCG  H+AAI E G +  WGWG              GQLG G       PT V
Sbjct: 353 ---ICKVSCGRHHSAAIDEDGVLFMWGWGAR------------GQLGQGEPKSLFSPTPV 397

Query: 399 NFGENVKALQVSCGFNHTGAL 419
           N   +     VSCG+ HT A+
Sbjct: 398 NGFNDQPLEDVSCGYGHTAAI 418


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 168/344 (48%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  GLN  GQLG         +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN---KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G++          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +   AAG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISTNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HGREGNK----PEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+   +   S
Sbjct: 174 DFPSQASPQRVRSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGHG+E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHGREGN-----------KPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KDFPSQASPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   E R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 179/364 (49%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G+ G+GS        P V       ++K +ACGG H++FL E G VY  GLN  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E+ G   +P  I  L  + +V ++ G  HS A++  G+++ WG  S+GQLGL  
Sbjct: 64  GQLG-HESEGS--KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL-T 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                + +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 120 TIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G  +  ++   +     
Sbjct: 177 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  S++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG  HT A   S G I  +G G            + GQLG G+  +   
Sbjct: 290 ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCG------------TRGQLGTGHTCNVKC 337

Query: 395 PTIV 398
           P+ V
Sbjct: 338 PSPV 341



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 134/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P +  A     +  +ACG +H++ L++ G V++ G    GQLG++        P  I  
Sbjct: 74  KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++QIS G  H  A+  DG+ + WG+NS GQLGLGK+       P +V+ L GI  
Sbjct: 134 LNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS-PQRVKSLDGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   SG+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDER---------DRESPCHVKLLRSQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           +HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 HHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKG 343



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 33/332 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G + FGQ GI  N+   +   ++ G    + V +++ G +HS  +  DGE+Y  G N+ G
Sbjct: 5   GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTKG 64

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   + +K    P  +  L+G      A G   SVA++  G+V SWGAG  G+LG   
Sbjct: 65  QLGHESEGSK----PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGLTT 120

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               +          PRLIK+L    +   + G  H   +  +G+ + +G  +  ++ L 
Sbjct: 121 IEDAVT--------VPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 273 QEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +E      P  +  L   P ++ V  GG H+  L+  G ++ WG N +G LG+       
Sbjct: 173 KECPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRE 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           SP  V+   S+  V  +SCG +HTA +++ G + T+G G            S GQLGH +
Sbjct: 232 SPCHVKLLRSQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDS 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             D ++P  V      +  Q++CG +HT A +
Sbjct: 279 MNDEVNPRRVLELMGSEVSQIACGRHHTLAFV 310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 123/278 (44%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +S GQ G+G     +IP P     +     K+ A G   SV +   G+V + G    
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH  E S            P LI  L G  +   A G  HS  + + G+V+ +G  +
Sbjct: 64  GQLGHESEGS-----------KPELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      ++ CG +H   L + G+ +TWG N  G LG+G
Sbjct: 113 DGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             +S 
Sbjct: 173 KECPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGWG------------KNSS 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V    + K + +SCG  HT  L
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 32/346 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GSL+ +  PV   A+   ++ A+  G  H+L +   G V+  G N+FGQ
Sbjct: 72  WGDNAYGQLGNGSLQDQRVPV--RAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQ 129

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G    P+++ GL  EVV+++ G+ HS A+  DG ++ WG N  G+LG G    
Sbjct: 130 LGDGTTTGRQ-APVQVPGL-GEVVRVAAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQ 187

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V+ L  I  K  A G   S+A+ G G+V +WG+  +G+LG     +  G+  
Sbjct: 188 RLMPV--QVQGLPTI--KAIAAGNAHSLALDGTGRVWAWGSNSNGQLG----DTTAGY-- 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P L+  L        +AG  HS     +G  +++G     ++          P 
Sbjct: 238 ---RMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQ 292

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   + V+    H+ VL S G ++TWGSN+ G LG G+ +    P +V G  S   
Sbjct: 293 QVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMG-LSGVV 351

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
                 G    A ++ G++ TW            GH+  GQLG G+
Sbjct: 352 AVAAGSGQHSVAVMANGEVWTW------------GHNVEGQLGEGS 385



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 176/425 (41%), Gaps = 86/425 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   GRLG G+   R  PV        ++KA+A G AH+L L  TG V+A G N  GQ
Sbjct: 172 WGSNGAGRLGDGTTTQRLMPVQVQGLP--TIKAIAAGNAHSLALDGTGRVWAWGSNSNGQ 229

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     GY + P  + GL      +S G +HS     DG  ++WG N+ GQLG G   +
Sbjct: 230 LG-DTTAGYRMLPALVPGL-TNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTS 287

Query: 163 KVIP------------------------------------------------IPTKVECL 174
           +  P                                                +P +V  L
Sbjct: 288 RSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQEQRLVPVQVMGL 347

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SG+    A  G + SVAV   G+V +WG    G+LG G           +S Y+    + 
Sbjct: 348 SGVVAVAAGSG-QHSVAVMANGEVWTWGHNVEGQLGEG-----------SSSYSAVPKRS 395

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE 292
              V+    AAG  H      +G V+ +GD A  K    +G  A+R  P+ +  L     
Sbjct: 396 HALVERTSVAAGRYHGLASKPDGTVWAWGDNA--KGQLGDGTTAQRLLPTQVPGLTNMVA 453

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V  G + +  L + G ++ WG N NG LG GS     +P +V G    + V  ++ G  H
Sbjct: 454 VAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTDRSNPTQVPG---LTGVVSIAAGPGH 510

Query: 353 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
             A+ ++G + TW            G ++ GQLG G  VD   PT V     V  + V+ 
Sbjct: 511 ALAVKADGTLWTW------------GDNNTGQLGDGTTVDRPIPTQVPGVTGV--VSVAA 556

Query: 412 GFNHT 416
           G  H+
Sbjct: 557 GLYHS 561



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 145/301 (48%), Gaps = 21/301 (6%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
           +A     L  +A G  HTL +   G V+A G N +GQLG + ++     P+R  GL   +
Sbjct: 43  AAETASRLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLG-NGSLQDQRVPVRAWGLWN-I 100

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +  G  HS A+  DG ++ WG N+ GQLG G    +  P+  +V  L  +   + A G
Sbjct: 101 SAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPV--QVPGLGEVV--RVAAG 156

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           F  S+A+   G V +WG+ G+GRLG G          +T    P  ++ L    +K  AA
Sbjct: 157 FSHSLALKTDGTVWAWGSNGAGRLGDGT---------TTQRLMPVQVQGLP--TIKAIAA 205

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  HS  +D  GRV+ +G  +  ++      +   P+L+  L  +  +  G  H+ V  +
Sbjct: 206 GNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQA 265

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 364
            G  + WG+N  G LG G+     +P++V G    + VD V     H+  + S+G + TW
Sbjct: 266 DGTTWVWGANTYGQLGDGTTTSRSAPQQVSG---LAGVDGVLGAELHSLVLKSDGTVWTW 322

Query: 365 G 365
           G
Sbjct: 323 G 323



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 163/372 (43%), Gaps = 38/372 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS   R  P          + ++A G  H L +   G ++  G N+ GQ
Sbjct: 473 WGDNANGQLGNGSTTDRSNPTQVPGLT--GVVSIAAGPGHALAVKADGTLWTWGDNNTGQ 530

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   + P ++ G+   VV ++ G +HS  + VDG ++ WG N  GQLG G    
Sbjct: 531 LGDGTTVDRPI-PTQVPGVTG-VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTI 588

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+P++   L+G+    A  G   S+A+   G V +WG    G+LG+G          
Sbjct: 589 R--PVPSQTPNLTGVVAITA--GLYHSLALKTDGTVWAWGYNLHGQLGNGN--------- 635

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T++  P  +    G  V +  AG  HS  I  +G V+ +G     ++          P+
Sbjct: 636 TTTQQVPTQVPGFSG-GVSL-GAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPT 693

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--ERVQGPFSE 340
            ++       +  G +H+  L + G  + WGSN+ G LG GS    ++P   R+ G    
Sbjct: 694 QVAGFTGVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGL 753

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           +  D+ +      A  S+G +  W            G ++ GQLG G  +    P  V+ 
Sbjct: 754 AAGDRFTA-----ARKSDGTVWAW------------GDNTYGQLGDGTTLATRSPAQVSG 796

Query: 401 GENVKALQVSCG 412
             +V+ L    G
Sbjct: 797 LTDVEGLAAGEG 808



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 160/355 (45%), Gaps = 36/355 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + A+  G  H+L L   G V+A G N  GQ
Sbjct: 573 WGSNYEGQLGGGTTTIR--PVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNLHGQ 630

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + N      P ++ G     V +  G +HS AI  DG ++ WG N  GQLG G   +
Sbjct: 631 LG-NGNTTTQQVPTQVPGFSGG-VSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTS 688

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    PT+V   +G+     A G   SVA+   G   +WG+   G+LG G          
Sbjct: 689 RT--TPTQVAGFTGV--SFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGS--------- 735

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +   Y P L +    V  +  AAG   +A    +G V+ +GD    ++        R P+
Sbjct: 736 ARWHYAPTLSRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   E +  G  H  V+   G ++TWG+N  G LG G+      P +V G    + 
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPG---LTG 849

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
           V  V+ G+ H+ A+ ++G +  WGWG       E+ +   GQLG G     + PT
Sbjct: 850 VVAVAAGYAHSLALKADGTV--WGWG-------ENIY---GQLGDGTTTQRVAPT 892



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 168/409 (41%), Gaps = 86/409 (21%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG   YG+LG G+  SR  P   S      +  +     H+L L   G V+  G N  G
Sbjct: 271 VWGANTYGQLGDGTTTSRSAPQQVSGLA--GVDGVLGAELHSLVLKSDGTVWTWGSNQRG 328

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG        L P+++ GL   V   +    HS A+  +GE++ WG N  GQLG G  +
Sbjct: 329 QLGDGTQE-QRLVPVQVMGLSGVVAVAAGSGQHSVAVMANGEVWTWGHNVEGQLGEGSSS 387

Query: 162 AKVIP------------------------------------------------IPTKVEC 173
              +P                                                +PT+V  
Sbjct: 388 YSAVPKRSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQRLLPTQVPG 447

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+ +     A G   S+A+   G V +WG   +G+LG+G          +T    P  + 
Sbjct: 448 LTNMVA--VAAGHHSSLALKADGTVWAWGDNANGQLGNGS---------TTDRSNPTQVP 496

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L GV V I AAG  H+  +  +G ++ +GD    ++   +G    RP + +++P    V
Sbjct: 497 GLTGV-VSI-AAGPGHALAVKADGTLWTWGDNNTGQL--GDGTTVDRP-IPTQVPGVTGV 551

Query: 294 V---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           V    G YH+ V+   G ++ WGSN  G LG G+  +   P +     + + V  ++ G 
Sbjct: 552 VSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTP---NLTGVVAITAGL 608

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            H+ A+ ++G +  W            G++  GQLG+GN      PT V
Sbjct: 609 YHSLALKTDGTVWAW------------GYNLHGQLGNGNTTTQQVPTQV 645



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 19/294 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  YG+LG G+  +   P   S      ++ LA G  H + +   G V+  G N  GQ
Sbjct: 772  WGDNTYGQLGDGTTLATRSPAQVSGLTD--VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQ 829

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P ++ GL   VV ++ GY HS A+  DG ++ WG+N  GQLG G    
Sbjct: 830  LGDGTTT-RRLVPTQVPGLTG-VVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTTTQ 887

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +V   PT+ + L+ + +   A G    +A    G + +WG    G+LG G          
Sbjct: 888  RV--APTQAQGLTVVLSM--ASGTYHGLARKADGTLWAWGYNAHGQLGIGT--------- 934

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +T+   P L+  L GV V ++A    HS  +  +G V+ +G  +  ++          P+
Sbjct: 935  TTTRLAPTLVPSLSGV-VSLSAT-HQHSLALKPDGTVWAWGYNSNGQLGDGTTTTRHVPT 992

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
                L   + V  G  ++  + + G +++WG N+ G LG G+     +P +V G
Sbjct: 993  QAPSLSSVKAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGTATPRATPTQVAG 1046



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 165/378 (43%), Gaps = 44/378 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  SR  P   + F   S   LA G  H++ L   G  +A G ND GQ
Sbjct: 673  WGYNYRGQLGDGTTTSRTTPTQVAGFTGVSF--LAAGEFHSVALRTDGTAWAWGSNDKGQ 730

Query: 103  LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG  S    Y+    R+ G +     ++ G   ++A   DG ++ WG N+ GQLG G   
Sbjct: 731  LGDGSARWHYAPTLSRLVGARG----LAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTL 786

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            A     P +V  L+ +  +  A G    V V   G V +WG    G+LG G         
Sbjct: 787  A--TRSPAQVSGLTDV--EGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGT-------- 834

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             +T    P  +  L GV     AAG+ HS  +  +G V+ +G+    ++   +G   +R 
Sbjct: 835  -TTRRLVPTQVPGLTGVVA--VAAGYAHSLALKADGTVWGWGENIYGQL--GDGTTTQRV 889

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P+    L     +  G YH     + G L+ WG N +G LGIG+     +P  V    S
Sbjct: 890  APTQAQGLTVVLSMASGTYHGLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVP---S 946

Query: 340  ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S V  +S   +H+ A+  +G +  WG            ++S GQLG G       PT  
Sbjct: 947  LSGVVSLSATHQHSLALKPDGTVWAWG------------YNSNGQLGDGTTTTRHVPTQA 994

Query: 399  NFGENVKALQVSCGFNHT 416
                +VKA  VS GF ++
Sbjct: 995  PSLSSVKA--VSAGFEYS 1010



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 103/228 (45%), Gaps = 19/228 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   YG+LG G+   R  P          + ++A G  H L     G ++A G N  GQ
Sbjct: 872  WGENIYGQLGDGTTTQRVAPTQAQGLTV--VLSMASGTYHGLARKADGTLWAWGYNAHGQ 929

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LGI       L P  +  L   VV +S  + HS A+  DG ++ WG NSNGQLG G    
Sbjct: 930  LGIGTTT-TRLAPTLVPSLSG-VVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTTT 987

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +   +PT+   LS +  K  + GFE S+AV   G V SWG    G+LG G          
Sbjct: 988  R--HVPTQAPSLSSV--KAVSAGFEYSLAVKADGTVWSWGINDRGQLGSGT--------- 1034

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            +T   TP  +  L    V +  A   H+  +  +G +  FGD    ++
Sbjct: 1035 ATPRATPTQVAGLN--SVTLLLAARAHALVVSADGTMRGFGDNEAGQL 1080



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 18/182 (9%)

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
           ++ + AAG  H+  +  +G V+ +GD A  ++        R P     L     V  G  
Sbjct: 49  RLGLVAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWNISAVGAGDL 108

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
           H+  + S G ++TWG N  G LG G+     +P +V G   E  V +V+ G+ H+ A+ +
Sbjct: 109 HSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPG-LGE--VVRVAAGFSHSLALKT 165

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           +G +  WG  G+            G+LG G     + P  V     +KA  ++ G  H+ 
Sbjct: 166 DGTVWAWGSNGA------------GRLGDGTTTQRLMPVQVQGLPTIKA--IAAGNAHSL 211

Query: 418 AL 419
           AL
Sbjct: 212 AL 213



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 4/124 (3%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R  P    +    S+KA++ G  ++L +   G V++ G+ND GQ
Sbjct: 972  WGYNSNGQLGDGTTTTRHVPTQAPSLS--SVKAVSAGFEYSLAVKADGTVWSWGINDRGQ 1029

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG S        P +++GL   V  +     H+  ++ DG +  +G N  GQLG G    
Sbjct: 1030 LG-SGTATPRATPTQVAGL-NSVTLLLAARAHALVVSADGTMRGFGDNEAGQLGAGDTLI 1087

Query: 163  KVIP 166
            ++ P
Sbjct: 1088 RLAP 1091


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 109/323 (33%), Positives = 165/323 (51%), Gaps = 39/323 (12%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 3649

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3650 GKLG-HGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN 3708

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
             + K +P             ++ A G   ++AV+  G ++ ++G G  G+LG G      
Sbjct: 3709 TSNKKLP-------------ERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN----- 3750

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                ST++ +P+ +  L G+ +K  A G   S  + ++G VY FG DR +     +  NH
Sbjct: 3751 ----STAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3806

Query: 278  ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
              RP  +  L     E+V  G  HT  L S G++Y WGSN  G LG+G  + +  P  V 
Sbjct: 3807 -NRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVT 3865

Query: 335  --QGPFSESPVDQVSCGWKHTAA 355
              QG      V Q+S G  H+AA
Sbjct: 3866 VLQG----KNVRQISAGRCHSAA 3884



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 426 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 485 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 545 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 601 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 651 ALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 710

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 711 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 121/246 (49%), Gaps = 23/246 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  ++CG  H+  +T  G ++  G  D+G+
Sbjct: 3644 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGR 3703

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL-YMWGKNSNGQLGLGKKA 161
            LG+                KK   +++ G +H+ A++ DG + + +G    G+LGLG   
Sbjct: 3704 LGLGNTSN-----------KKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 3752

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            AK    P KV+ L GI  K+ A G + SVA+T  G V ++G      L  G         
Sbjct: 3753 AKS--SPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEG--------- 3801

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            R+ +   P+ +  L GV ++  A G  H+  +   G VY +G  +  ++     NH R P
Sbjct: 3802 RARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREP 3861

Query: 282  SLISKL 287
            +L++ L
Sbjct: 3862 TLVTVL 3867



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 420

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 421 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 480

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 481 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 531

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 532 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 591

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 592 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 647

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  AL
Sbjct: 648 EATA-------------LRPKLIEELAATRIVDISIGDSHCLAL 678



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 137/308 (44%), Gaps = 43/308 (13%)

Query: 118  ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            I+G+ ++++  +T       +    ++Y+WG   +GQL    +A + + +P      S  
Sbjct: 3511 INGMDEQIMSWATSRPEDWHLGGKCDVYLWGAGRHGQLA---EAGRNVMVPAAAPSFSQ- 3566

Query: 178  FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              +Q   G   +  +   G VL+ G G  GRLG G    +         +   +I  L+G
Sbjct: 3567 -AQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDL---------HVLTVISALQG 3616

Query: 238  VKVK--IAAAGFL-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
              V   + + G   HS  + E+G V+ +GD    K+     +  RRP  I  L   EEVV
Sbjct: 3617 FVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVV 3675

Query: 295  ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
               CG  H+ V+TS G+L+T+G+ + G LG+G+      PER            V+CG  
Sbjct: 3676 QMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPER------------VACGLN 3723

Query: 352  HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            HT A+S    + W +G        DG    G+LG GN      P  V+    +   +V+C
Sbjct: 3724 HTLAVSADGSMVWAFG--------DGDY--GKLGLGNSTAKSSPQKVDVLCGIGIKKVAC 3773

Query: 412  GFNHTGAL 419
            G   + AL
Sbjct: 3774 GTQFSVAL 3781



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 480 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 539

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 540 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 596

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 597 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 651

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 652 LR------PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSM 692



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 70/339 (20%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AAL 184
            Q+  G + +  I  +G +   G+ S G+LG G   +  + + T +  L G    Q   + 
Sbjct: 3569 QVICGQNCTFVIQANGTVLACGEGSYGRLGQGN--SDDLHVLTVISALQGFVVTQLVTSC 3626

Query: 185  GFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G +  S+A+T  G+V SWG G  G+LGHG          S  +  PR I+ L+G +V   
Sbjct: 3627 GSDGHSMALTESGEVFSWGDGDYGKLGHGN---------SDRQRRPRQIEALQGEEVVQM 3677

Query: 244  AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            + GF HSA +  +G+++ FG+    ++    GN + +     KLP  E V CG  HT  +
Sbjct: 3678 SCGFKHSAVVTSDGKLFTFGNGDYGRLGL--GNTSNK-----KLP--ERVACGLNHTLAV 3728

Query: 304  TSGGEL-YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
            ++ G + + +G  + G LG+G+     SP++V        + +V+CG + + A++ +G +
Sbjct: 3729 SADGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHV 3787

Query: 362  LTWGW----------GGSH----------GTFSED--------------------GHSSG 381
             T+G             +H          G   ED                    G +S 
Sbjct: 3788 YTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSE 3847

Query: 382  GQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
            GQLG G+      PT+V    G+NV+  Q+S G  H+ A
Sbjct: 3848 GQLGLGHTNHVREPTLVTVLQGKNVR--QISAGRCHSAA 3884



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 641

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 642 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 702 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 743



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 533 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 590

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 591 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 647

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 648 EATAL-RPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 699

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 700 --STGPITKPKKVSGLDGIAIQQISAGTSHS 728



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 366 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 425

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 484

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 485 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 144/283 (50%), Gaps = 30/283 (10%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +Y WG+  +G+LG G    K +P  T    L+G        G   + AV+  G + +W
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLT--HSLAGQVITHVTCGSYHTAAVSSKGNLFTW 83

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G  G+LGHG ES            TP+ +  L G+ V   A G  H+A +   G +Y 
Sbjct: 84  GGGMYGKLGHGNESG---------HSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYT 134

Query: 262 FGDR--AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           +GD+   V      EG H   P L+ +L      ++   G+HT  LT  GE+YTWG  + 
Sbjct: 135 WGDKENGVAGHGDTEG-HQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           G LG G+    HSP  V+    + PV Q+SCG  H+A ++ +GK+ T+G GG H      
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPV-QISCGGFHSAVVTADGKMYTFG-GGEH------ 245

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                GQLGHG+ V+ + PT+V   + V   Q++CG++H+ AL
Sbjct: 246 -----GQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVAL 283



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 160/321 (49%), Gaps = 19/321 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD GRLG G    ++ P +  +     +  + CG  HT  ++  G ++  G   +G+
Sbjct: 31  WGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGK 90

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG     G+S  P R+  L    VV I+ G  H++ +T  G LY WG   NG  G G   
Sbjct: 91  LGHGNESGHS-TPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTE 149

Query: 162 AKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 P  +E LSG    Q +A GF     +T  G+V +WG G  GRLGHG E +    
Sbjct: 150 GHQY-TPKLLERLSGKRVVQLSACGFHTG-CLTDAGEVYTWGEGKFGRLGHGAERNC--- 204

Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 ++PRL++ L G + V+I+  GF HSA +  +G++Y FG     ++   +  +  
Sbjct: 205 ------HSPRLVETLLGKRPVQISCGGF-HSAVVTADGKMYTFGGGEHGQLGHGDKVNKV 257

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +P+L+  L   +  ++ CG  H+  LTS  E+YTWG+ ++G LG G    + +P+ V+  
Sbjct: 258 KPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKL 317

Query: 338 FSESPVDQVSCGWKHTAAISE 358
             +  V   S   +HTA + E
Sbjct: 318 VGQKVVCVASYN-EHTACLVE 337



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 36/343 (10%)

Query: 87  TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELY 145
           T  G VY  G  D G+LG  +N G+   P     L  +V+  ++ G +H++A++  G L+
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDN-GWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLF 81

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            WG    G+LG G ++      P +V+ L G+     A G   +  VT  G + +WG   
Sbjct: 82  TWGGGMYGKLGHGNESGH--STPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIFGD 264
           +G  GHG             +YTP+L++ L G +V +++A GF H+ C+ + G VY +G+
Sbjct: 140 NGVAGHGDTEG--------HQYTPKLLERLSGKRVVQLSACGF-HTGCLTDAGEVYTWGE 190

Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++      +   P L+  L      ++ CGG+H+ V+T+ G++YT+G  E+G LG 
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250

Query: 323 GSIDVLHSPERVQ---GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
           G       P  V+   G F    + Q++CGW H+ A+ S  ++ TWG  G H        
Sbjct: 251 GDKVNKVKPTLVKDLDGVF----LTQITCGWSHSVALTSSHEVYTWG-NGDH-------- 297

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              G+LGHG       P +V      K + V+    HT  L+E
Sbjct: 298 ---GKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 176/364 (48%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+ G+G+        P  C      S+K +ACGG H +FL E G VY  GLN  
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E  G   +P +I  L  + ++ ++ G  HS A++  G+L+ WG  S+GQLGL  
Sbjct: 64  GQLG-HEREGN--QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMT 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               V  +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 121 TEDSV-AVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFP--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ ++ LEG+ +   AAG  HS  +  +G V+ +G     ++   +     
Sbjct: 177 -----SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRE 231

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG  S++   +P RV  
Sbjct: 232 SPCHV-KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL- 289

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G I  +G G              GQLG G+  +   
Sbjct: 290 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR------------GQLGTGHTCNVKC 337

Query: 395 PTIV 398
           P+ V
Sbjct: 338 PSPV 341



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 131/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 143/305 (46%), Gaps = 35/305 (11%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + V +++ G  H   +  DGE+Y  G N+ GQLG  ++  +    P ++  L+       
Sbjct: 34  RSVKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGHEREGNQ----PEQIGALADQHIIHV 89

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKV 240
           A G   S+A++  G++ SWGAG  G+LG          L +T +    PRLI++L    +
Sbjct: 90  ACGESHSLALSDQGQLFSWGAGSDGQLG----------LMTTEDSVAVPRLIQKLNQQTI 139

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCG 296
              + G  H   +  +G+ + +G  +  ++     F      +R   +  +P ++ V  G
Sbjct: 140 LQVSCGNWHCLALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQ-VAAG 198

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G H+  L+  G ++ WG N  G LG+       SP  V+   ++  V  +SCG +HTA +
Sbjct: 199 GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV-YISCGEEHTAVL 257

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           ++ G + T+G G            S GQLGH +  D ++P  V      +  Q++CG  H
Sbjct: 258 TKSGGVFTFGAG------------SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQH 305

Query: 416 TGALL 420
           T A +
Sbjct: 306 TLAFV 310



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+G     ++  P     +S    K+ A G +  V +   G+V + G    
Sbjct: 4   WGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCGLNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------QPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALATDGQFFTWGKNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 175/383 (45%), Gaps = 36/383 (9%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WGN + G+LG G    R  PV  +      + A+A G  HT  LT  G V   G N +
Sbjct: 129 SCWGNNESGQLGNGITIQRRTPVQVAGLSS-GVAAIAAGEYHTCALTTDGAVTCWGSNGY 187

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG       S  P++++GL   V  I+ G  H+ A+T  G +  WG+N NGQLG G  
Sbjct: 188 GQLGDGTTTQRS-TPVQVAGLSSGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTT 246

Query: 161 AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +  P+      + G+ ++ AA+  G   + A+T GG V  WGA  SG+LG G      
Sbjct: 247 TQRSTPVN-----VLGLSSEVAAITAGDVYTCALTTGGGVTCWGANWSGQLGDG------ 295

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +    TP  +  L    V   AAG  H+  I   G V  +G     ++        
Sbjct: 296 ---TTDERSTPVDVVGLSS-GVTAIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQ 351

Query: 279 RRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P +++ L   +  +  G  HTC +T+GG +  WG N +G LG G+     +P +V+G 
Sbjct: 352 STPVVVNGLSSRAAAIAAGDGHTCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGL 411

Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
              S V  ++ G  HT A+S EG +  W            G++  GQLG G  +    P 
Sbjct: 412 --SSGVADITAGDSHTCALSTEGGVTCW------------GNNESGQLGDGTTIQRSTPV 457

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
            V  G +   + ++ G +HT AL
Sbjct: 458 QVE-GLSSGVVAITAGDSHTCAL 479



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 177/384 (46%), Gaps = 38/384 (9%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WG   Y +LG G+   +  PVV +     +  A+A G  HT  +T  G V   G N  
Sbjct: 333 SCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRA-AAIAAGDGHTCAMTTGGGVSCWGRNWS 391

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG          P+++ GL   V  I+ G  H+ A++ +G +  WG N +GQLG G  
Sbjct: 392 GQLGDGTTT-QRRTPMQVEGLSSGVADITAGDSHTCALSTEGGVTCWGNNESGQLGDGTT 450

Query: 161 AAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +  P+  +VE LS G+    A  G   + A++  G V  WG  GSG+LG+G       
Sbjct: 451 IQRSTPV--QVEGLSSGVVAITA--GDSHTCALSTEGGVTCWGGNGSGQLGNG------- 499

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T   TP  ++ L    + I A G  H+  +   G V  +G     ++   +G   +
Sbjct: 500 --TTTQRSTPVQVEGLSSGVMAITA-GDSHTCALTTGGGVTCWGGNWYGQL--GDGTTTQ 554

Query: 280 RPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           R   ++ +  S     +  GG HTC L++ G +  WG N    LG G+    ++P +V+G
Sbjct: 555 RNMPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTNHNTPVQVEG 614

Query: 337 PFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
               S V  ++ G+ HT A I+ G++  WGW            +  GQLG G     + P
Sbjct: 615 L--SSGVAAIAAGYAHTCALITSGEVTCWGW------------NWYGQLGDGTTTQRMTP 660

Query: 396 TIVNFGENVKALQVSCGFNHTGAL 419
            +VN G + +   +  G+ HT AL
Sbjct: 661 VVVN-GLSSEVAAIVAGYAHTCAL 683



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 160/347 (46%), Gaps = 33/347 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G A+T  LT    V   G N+FGQLG    I  +  P+ ++GL   VV I+ GY H+
Sbjct: 61  IAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRN-TPVAVNGLSSGVVAIAAGYAHT 119

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+T  G +  WG N +GQLG G    +  P+  +V  LS      AA G   + A+T  
Sbjct: 120 CALTTSGGVSCWGNNESGQLGNGITIQRRTPV--QVAGLSSGVAAIAA-GEYHTCALTTD 176

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V  WG+ G G+LG G          +T   TP  +  L      I A G  H+  +  
Sbjct: 177 GAVTCWGSNGYGQLGDG---------TTTQRSTPVQVAGLSSGVTAITAGGS-HTCALTT 226

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTW 312
            G V  +G     ++   +G   +R + ++ L  S EV     G  +TC LT+GG +  W
Sbjct: 227 GGAVTCWGRNGNGQL--GDGTTTQRSTPVNVLGLSSEVAAITAGDVYTCALTTGGGVTCW 284

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           G+N +G LG G+ D   +P  V G    S V  ++ G  HT AI+ G           G 
Sbjct: 285 GANWSGQLGDGTTDERSTPVDVVGL--SSGVTAIAAGNDHTCAITTG-----------GG 331

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            S  G +   QLG G       P +VN G + +A  ++ G  HT A+
Sbjct: 332 VSCWGVNQYSQLGDGTTTQQSTPVVVN-GLSSRAAAIAAGDGHTCAM 377



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 148/329 (44%), Gaps = 21/329 (6%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           + WG    G+LG G+   R  P+         +  +  G +HT  L+  G V   G N+ 
Sbjct: 384 SCWGRNWSGQLGDGTTTQRRTPMQVEGLSS-GVADITAGDSHTCALSTEGGVTCWGNNES 442

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG    I  S  P+++ GL   VV I+ G  H+ A++ +G +  WG N +GQLG G  
Sbjct: 443 GQLGDGTTIQRS-TPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGGNGSGQLGNGTT 501

Query: 161 AAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +  P+  +VE L SG+    A  G   + A+T GG V  WG    G+LG G       
Sbjct: 502 TQRSTPV--QVEGLSSGVMAITA--GDSHTCALTTGGGVTCWGGNWYGQLGDG------- 550

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T    P  +  L      IAA G  H+  +   G V  +G    D++      +  
Sbjct: 551 --TTTQRNMPVNVVGLSSGVAAIAAGGS-HTCALSTEGGVTCWGWNTYDQLGDGTRTNHN 607

Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P  +  L      +  GY HTC L + GE+  WG N  G LG G+     +P  V G  
Sbjct: 608 TPVQVEGLSSGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGTTTQRMTPVVVNGLS 667

Query: 339 SESPVDQVSCGWKHTAAISEGKILT-WGW 366
           SE  V  +  G+ HT A+S G  +T WGW
Sbjct: 668 SE--VAAIVAGYAHTCALSTGGGVTCWGW 694



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 134/306 (43%), Gaps = 24/306 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + A+  G +HT  LT  G V   G N +GQ
Sbjct: 488 WGGNGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQ 546

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+ + GL   V  I+ G  H+ A++ +G +  WG N+  QLG G +  
Sbjct: 547 LGDGTTTQRNM-PVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQLGDGTRTN 605

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +VE LS      AA G+  + A+   G+V  WG    G+LG G          
Sbjct: 606 HNTPV--QVEGLSSGVAAIAA-GYAHTCALITSGEVTCWGWNWYGQLGDG---------T 653

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN----HA 278
           +T   TP ++  L   +V    AG+ H+  +   G V  +G        +Q GN      
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTCWGW----NKYYQLGNGTISQR 708

Query: 279 RRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P  +  L      +  G  HTC L++GG +  WG +  G LG+G+I    +P  V   
Sbjct: 709 SIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTCWGWDVYGQLGVGTIAYRTTPVDVTVL 768

Query: 338 FSESPV 343
           F   PV
Sbjct: 769 FVYLPV 774



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 16/137 (11%)

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           I+   +   +  G  +TC LT+   +  WG+NE G LG G+    ++P  V G    S V
Sbjct: 52  IASAQHRTPIAAGDAYTCALTTNSAVICWGNNEFGQLGDGTTIQRNTPVAVNGL--SSGV 109

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++ G+ HT A+ + G +  W            G++  GQLG+G  +    P  V  G 
Sbjct: 110 VAIAAGYAHTCALTTSGGVSCW------------GNNESGQLGNGITIQRRTPVQV-AGL 156

Query: 403 NVKALQVSCGFNHTGAL 419
           +     ++ G  HT AL
Sbjct: 157 SSGVAAIAAGEYHTCAL 173


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 172/363 (47%), Gaps = 29/363 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P      +   +  + CG +HTLFLT+ G +YA G ND 
Sbjct: 6   WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +   +  P R++ L+  ++  IS G  HS A+T  G+++ WG N+ GQLG   
Sbjct: 66  GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDA 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +  P P  ++ +      Q A G    +A+T  G++ +WG+   G+LG G  S  + 
Sbjct: 126 ENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVP 184

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P LI+ L GV +   A G  HS  + ++G ++ +G     ++   + N   
Sbjct: 185 M--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRC 236

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       + CG   +  LT+ G ++T G+   G LG GS      P +V   
Sbjct: 237 YPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKV-FE 295

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + Q++CG +HT A   S GKI  +G GG             GQLG G   ++  P
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV------------GQLGIGMVGNHSTP 343

Query: 396 TIV 398
            IV
Sbjct: 344 QIV 346



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 156/311 (50%), Gaps = 17/311 (5%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  L +L ++ RP   ++ E + +  ++CG AH+L LT  G V++ G N  G
Sbjct: 61  GNNDHGQLGHDLDTLPNK-RPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG     G    P  I  +  K VVQI++G +H  A+T +GELY WG NS GQLG+G  
Sbjct: 120 QLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + KV P+PT ++ L+G+     A G   S AV+  G +  WG    G+LG    +     
Sbjct: 180 SEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  ++ L  + V+  + G   S  +   G V+  G     ++     ++   
Sbjct: 234 ----SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIV 289

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L  S+  ++ CG  HT     S G++Y +G    G LGIG +    +P+ V+GP
Sbjct: 290 PRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVRGP 349

Query: 338 FSESPVDQVSC 348
           + ++      C
Sbjct: 350 WFKTDFKSSDC 360



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 142/304 (46%), Gaps = 32/304 (10%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQ 181
           EVV++  G  H+  +T +G++Y  G N +GQLG        +P   P ++  L       
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLG---HDLDTLPNKRPQRLTSLENYIITC 93

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S+A+T  G+V SWG+   G+LGH  E+          + TPR+IK +    V 
Sbjct: 94  ISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG--------RQPTPRMIKAIGAKHVV 145

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGG 297
             A+G  H   +  NG +Y +G  +  ++ +         P+LI  L   P +  + CGG
Sbjct: 146 QIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAF-IACGG 204

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            H+  ++  G ++ WG N  G LG+  ++    P +++   S   V  +SCG   +  ++
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSVFLT 263

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            EG + T G     GTF        GQLGHG+  + I P  V      K  Q++CG  HT
Sbjct: 264 NEGGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHT 311

Query: 417 GALL 420
            A +
Sbjct: 312 LAFV 315



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 28/275 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG  ++G+LGLG    + + +P K++        +   G   ++ +T  GK+ + G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH         L +     P+ +  LE   +   + G  HS  +   G+V+ +G
Sbjct: 63  NDHGQLGHD--------LDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114

Query: 264 DRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
             AV + L  +  + R+P+  +I  +   +  ++  G YH   LT+ GELY WGSN  G 
Sbjct: 115 SNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQ 173

Query: 320 LGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
           LGIG+  + +  P  +Q   +  P+  ++CG  H+ A+S+ G I  WG      TF    
Sbjct: 174 LGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG----KNTF---- 224

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               GQLG  +     +PT +    ++    +SCG
Sbjct: 225 ----GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 255


>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Anolis carolinensis]
          Length = 409

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 179/405 (44%), Gaps = 46/405 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+LGLG  E  + P V   F   + ++K +  GG H+  LT+TG ++  G N  
Sbjct: 15  WGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQNKN 74

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+      +   L  S     V+Q++ G+  +  +   G+++  G NS GQLG+  +
Sbjct: 75  GQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQLGI-SQ 133

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILG 219
            ++   +  ++E L       AA G   ++AVT  G V  WG G S +     Q   +  
Sbjct: 134 TSEGSTVSKRIESLQEKVVNVAA-GLRHALAVTENGSVFQWGIGMSSQAKRACQGEMVPS 192

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           FLR+     P  +  LE  +VKI A+G  H+  + + G +Y++G+    K L  + +   
Sbjct: 193 FLRARQ---PCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNK-HKQLVNKDDFVL 248

Query: 280 RPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI---------- 325
           +P  I    +  E V     G  H    T  G+++TWG  + G LG   +          
Sbjct: 249 KPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRSGLPYEQMGQDGK 308

Query: 326 --------DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
                   + LHSP  V      S   Q++CG +H  AI  G+  +WGW           
Sbjct: 309 ASDENSVKEPLHSPALVPALTGAS---QIACGSEHNLAIVGGQCFSWGW----------- 354

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
            +  G  G+G + +   P  ++   + K L V CG  H+ A   +
Sbjct: 355 -NEHGMCGNGTEANVCAPQPLDVLSSAKLLYVGCGAGHSMAFCHF 398



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 41/352 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWG 148
           ++  G N +GQLG+       L P  + G    ++ V  I+ G  HS+ +T  GEL++ G
Sbjct: 12  LFTWGANSYGQLGLGHREDVFL-PQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCG 70

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
           +N NGQLGLG    + +        L G    Q A G++ ++ + G G+V S G+   G+
Sbjct: 71  QNKNGQLGLGH--TEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFGQ 128

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFG--- 263
           LG          +  TSE +  + K +E ++ K+   AAG  H+  + ENG V+ +G   
Sbjct: 129 LG----------ISQTSEGS-TVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGM 177

Query: 264 ----DRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
                RA    +      AR+P  ++ L  +  + V  G  H   LT  GELY WG+N++
Sbjct: 178 SSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKH 237

Query: 318 GCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
             L +   D +  P+++    F    V +V  GW H  A +E GK+ TWG    +G    
Sbjct: 238 KQL-VNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWG-RADYGQLGR 295

Query: 376 DG--HSSGGQLGHGNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALL 420
            G  +   GQ G  +D + +      P +V       A Q++CG  H  A++
Sbjct: 296 SGLPYEQMGQDGKASDENSVKEPLHSPALVP--ALTGASQIACGSEHNLAIV 345



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 43/343 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           L G    G+LGLG  E      +CS+    S+  +ACG   T+ L  +G V++ G N FG
Sbjct: 68  LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLGIS+    S    RI  L+++VV ++ G  H+ A+T +G ++ WG   + Q    K+A
Sbjct: 128 QLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHALAVTENGSVFQWGIGMSSQ---AKRA 184

Query: 162 AK--VIPI------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +  ++P       P KV  L     K  A G   + A+T  G++  WG     +L + +
Sbjct: 185 CQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNNKHKQLVN-K 243

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--------- 264
           +  +L   +  + Y         G KV+    G+ H     E G+V+ +G          
Sbjct: 244 DDFVLKPQKIDAHY-------FGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGRS 296

Query: 265 -----------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
                      +A D+   +E  H+  P+L+  L  + ++ CG  H   +  GG+ ++WG
Sbjct: 297 GLPYEQMGQDGKASDENSVKEPLHS--PALVPALTGASQIACGSEHNLAIV-GGQCFSWG 353

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            NE+G  G G+   + +P+ +    S + +  V CG  H+ A 
Sbjct: 354 WNEHGMCGNGTEANVCAPQPLD-VLSSAKLLYVGCGAGHSMAF 395


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 171/363 (47%), Gaps = 32/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P      E  +++ +ACG  +T+ +T+ G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +I+ G  H+ A+   G+L+ WG N NGQLGL  
Sbjct: 64  GQLG-HEKARKRLQ--LIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  +P  ++ L      Q A G E S+A+T  G++ +WG+   G+LG G       
Sbjct: 121 VDCTE-RVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNREGQLGLGS------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +T+E  P+ I  L  V +   A G  H+  I ++G V+ +G     ++   +     
Sbjct: 174 --YTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRN 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG G+      P +V   
Sbjct: 232 LPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMEL 291

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S V Q+SCG +HT A+  S G++  WG GG+            GQLG+        P
Sbjct: 292 MG-STVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNRASQSATTP 338

Query: 396 TIV 398
            +V
Sbjct: 339 QVV 341



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 39/330 (11%)

Query: 101 GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LG+     ENI    E   I      V QI+ G +++ AIT +G++Y  G N  GQLG
Sbjct: 10  GELGLGGIEDENIFMPREVDFIEA--SNVEQIACGENYTVAITKEGKVYSCGNNDYGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             K   ++  IP     L     ++ A G   ++AV   G++ SWG   +G+LG      
Sbjct: 68  HEKARKRLQLIPG----LDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQLGLNS--- 120

Query: 217 ILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
                   +E  PR+IK L   V V+IA  G  HS  +  +G +Y +G     ++     
Sbjct: 121 -----VDCTERVPRMIKVLGTNVIVQIAC-GTEHSIALTNDGELYAWGSNREGQLGLGSY 174

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                  +R S ++ +P +  + CGGYHT V++  G +++WG N  G LG+  +   + P
Sbjct: 175 TTTEIKPKRISTLAAVPIAF-IACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLP 233

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            +++     + V   +CG + +  ++ +G + T G G              GQLGHGN  
Sbjct: 234 CQLRT-LRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMY------------GQLGHGNTT 280

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + I P  V         Q+SCG  HT AL+
Sbjct: 281 NEILPRQVMELMGSTVTQISCGKRHTLALV 310


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 169/344 (49%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G+N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL       + +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL-MTIEDSVAVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 35/329 (10%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISPNLQGIVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LF 272
           ++    S +   PRLI++L    +   + G  H   +  +G+ + +G  +  ++     F
Sbjct: 118 LMTIEDSVA--VPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEF 175

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 +R   +  +P ++ VV GG H+  L+  G ++ WG N  G LG+       SP 
Sbjct: 176 PSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPC 234

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  D
Sbjct: 235 HVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSMND 281

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGALL 420
            ++P  V      +  Q++CG  HT A +
Sbjct: 282 EVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      ++  P     +S    K+ A G   SV +   G+V + G    
Sbjct: 4   WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV  G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL   + R  P          +  ++CG  HT  LT++G V+  G    GQ
Sbjct: 214 WGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 274 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 332

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 333 CNVKCPSPVK 342


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/335 (32%), Positives = 158/335 (47%), Gaps = 20/335 (5%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN   G+LG+G  ++  + P  C  F    LK + CGG H++FL   G VY  G N  G
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  +  G S  P  +  L  +++  +S G  HS A+   G+L+ WG    GQLGLG  
Sbjct: 64  QLG-HDKAGIS--PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTT 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              V  IP  V+ L      Q   G +  VA++  G++ +WG   SG+LG G+       
Sbjct: 121 ETTV-RIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKGEP---- 175

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S+  P  +K L G+ +    AG  HS  +  +G V+ +G     ++   +      
Sbjct: 176 ----SKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S++VV   CG  HT  LT  G L+T+G    G LG GS +    P RV   
Sbjct: 232 PCHI-KFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSELLPRRVL-E 289

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHG 371
              + V Q++CG  HT A      + + +G  SHG
Sbjct: 290 LMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHG 324



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 28/277 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +GQLG+G +   V   P      SG   K+   G + SV +   G V + G+   
Sbjct: 4   WGNAKDGQLGIGVEKNPVFE-PRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +           +  +P ++  L+  K+ + + G  HS  ++E G+++ +G   
Sbjct: 63  GQLGHDK-----------AGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGD 111

Query: 267 VDKM-LFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P L+ +L      +V+CG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 GGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLG 171

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
             +            +  P+ Q++ G  H+ A+S  G +  WG             +  G
Sbjct: 172 KGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWG------------KNRAG 219

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  +  D   P  + F  + K + +SCG  HT AL
Sbjct: 220 QLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAAL 256



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 40/330 (12%)

Query: 101 GQLGISENIGYSLEPLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GQLGI        EP         GLK    ++  G  HS  +  DG +Y  G NS GQL
Sbjct: 10  GQLGIGVEKNPVFEPRNCHVFSGRGLK----EVGCGGQHSVFLMHDGSVYTCGSNSCGQL 65

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K        P  V  L        + G   S+AV   G++ +WGAG  G+LG G   
Sbjct: 66  GHDKAGIS----PEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   T+   PRL+K L   ++     G  H   +  +G+++ +G     ++   +G
Sbjct: 122 --------TTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGKG 173

Query: 276 NHARR-PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             ++  P  +  L   P ++ +  GG H+  L+  G ++ WG N  G LG+        P
Sbjct: 174 EPSKLFPHPLKSLAGIPLAQ-ITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVP 232

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             ++   S+  V  +SCG +HTAA++ +G + T+G G            S GQLGHG+  
Sbjct: 233 CHIKFLRSQKVV-YISCGDEHTAALTKDGGLFTFGDG------------SWGQLGHGSTN 279

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             + P  V      +  Q++CG +HT A +
Sbjct: 280 SELLPRRVLELMGTEVSQIACGRHHTLAFV 309



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 3/138 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+ G ++  G   +GQ
Sbjct: 213 WGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQ 272

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L P R+  L   EV QI+ G HH+ A +   G +Y +G NS+GQLG G  
Sbjct: 273 LG-HGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGIL 331

Query: 161 AAKVIPIPTKVECLSGIF 178
                P P K    S  F
Sbjct: 332 GDARSPFPVKTSVPSEDF 349


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 168/344 (48%), Gaps = 32/344 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P VC      S+K +ACGG H++FL E G VY  G N  GQLG  E  G   +P +I  
Sbjct: 24  EPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG-HEREGN--KPEQIGA 80

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L  + +V ++ G  HS A++  G+L+ WG  S+GQLGL      V  +P  ++ L+    
Sbjct: 81  LADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSV-AVPRLIQKLNQQTI 139

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q + G    +A+   G+  +WG    G+LG G+E          S+ +P+ ++ LEG+ 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFP--------SQASPQRVRSLEGIP 191

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CG 296
           +    AG  HS  +  +G V+ +G     ++   +      P  + KL  +++VV   CG
Sbjct: 192 LAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV-KLLRTQKVVYISCG 250

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLT  G ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A 
Sbjct: 251 EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAF 309

Query: 357 --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S G I  +G G              GQLG G+  +   P+ V
Sbjct: 310 VPSSGLIYAFGCGAR------------GQLGTGHTCNVKCPSPV 341



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG+         P  I  
Sbjct: 74  KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133

Query: 121 LKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++ ++Q+S G  H  A+  DG+ + WG+NS+GQLGLGK+       P +V  L GI  
Sbjct: 134 LNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQAS-PQRVRSLEGIPL 192

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q   G   S A++  G V  WG   +G+LG   E             +P  +K L   K
Sbjct: 193 AQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEK---------DRESPCHVKLLRTQK 243

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 244 VVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 303

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 304 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 159/331 (48%), Gaps = 39/331 (11%)

Query: 100 FGQLGISENI-GYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            GQ GIS N+ G   EP ++ G    + V +++ G +HS  +  DGE+Y  G N+ GQLG
Sbjct: 9   LGQPGISPNLQGVVAEP-QVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTKGQLG 67

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             ++  K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG      
Sbjct: 68  HEREGNK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLG------ 117

Query: 217 ILGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---- 270
               L +T +    PRLI++L    +   + G  H   +  +G+ + +G  +  ++    
Sbjct: 118 ----LMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLGK 173

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            F      +R   +  +P ++ VV GG H+  L+  G ++ WG N  G LG+       S
Sbjct: 174 EFPSQASPQRVRSLEGIPLAQ-VVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRES 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P  V+   ++  V  +SCG +HTA +++ G + T+G G            S GQLGH + 
Sbjct: 233 PCHVKLLRTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SCGQLGHDSM 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            D ++P  V      +  Q++CG  HT A +
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFV 310



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 120/278 (43%), Gaps = 29/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQ G+      V+  P     +S    K+ A G   SV +   G+V + GA   
Sbjct: 4   WGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGANTK 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  +
Sbjct: 64  GQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGS 112

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L    +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+G
Sbjct: 113 DGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGRNSHGQLGLG 172

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
                  SP+RV+      P+ QV  G  H+ A+S  G +  WG             ++ 
Sbjct: 173 KEFPSQASPQRVRS-LEGIPLAQVVAGGAHSFALSLSGAVFGWGM------------NNA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 GQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVL 257


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 53  LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGY 111
           LG   ++++PV  SA E   +K +ACG  HTL +++ G V   G ND GQ G++  +I  
Sbjct: 69  LGQDRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIEN 128

Query: 112 SLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
              P  +  L   + V++  G  HS A+T DG L+ WG N+ GQLG+G         PT+
Sbjct: 129 KPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE 188

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           +  L G+   + A G   S A+T  G V  WG    G+LG G +          ++  P 
Sbjct: 189 LTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKAYPT 239

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           L++ +    VK  A G  H+A +  +G V++FG  +  ++      +   P  +  L  S
Sbjct: 240 LLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGS 299

Query: 291 E--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
           +  +V CG +HT VL  S G LY +G   +G LG        +P+RV GP+       V 
Sbjct: 300 DITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPW-------VP 352

Query: 348 CGWKHTAAISEGKILTWGWGGSHGTFS 374
                  + S+G+++   + G H  FS
Sbjct: 353 HSSTEKNSSSKGRVVRCIYAGGHHCFS 379



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 160/328 (48%), Gaps = 34/328 (10%)

Query: 101 GQLGISENIGYSLEPL--RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLGI    G + + +   ++ L  + VQ IS G HH+  +  DG LYM G NS GQLG 
Sbjct: 12  GQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ 71

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +   K    P +V  L  +  K  A G + ++AV+  G+VL WG    G+ G       
Sbjct: 72  DRNQYK----PVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCG------- 120

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
           L      ++  PR++K L   +      G LHS  +  +GR++ +GD    ++       
Sbjct: 121 LATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 180

Query: 276 NHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           N+  RP+ ++ L   P    V CGG+H+  LT  G ++ WG N+ G LG+G+ +    P 
Sbjct: 181 NYTDRPTELTSLRGVPLV-RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPT 239

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            ++   S+  V  ++CG  HTA ++ +G +  +G G            S GQLGHG++ +
Sbjct: 240 LLRNMRSQM-VKHIACGQDHTAMLTADGGVFLFGQG------------SEGQLGHGSNYN 286

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++P  V         QV+CG +HT  L
Sbjct: 287 EVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 159/342 (46%), Gaps = 24/342 (7%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKK-EV 125
            E   +K +ACG  HTL +++   V   G ND GQ G++  +I     P  +  L   + 
Sbjct: 424 LETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQF 483

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V++  G  HS A+T DG L+ WG N+ GQLG+G         PT++  L G+   + A G
Sbjct: 484 VKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACG 543

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G V  WG    G+LG G +          ++  P L++ +    VK  A 
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKE---------NKSYPTLLRNMRSQMVKHIAC 594

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVL 303
           G  H+A +  +G V++FG  +  ++      +   P  +  L  S+  +V CG +HT VL
Sbjct: 595 GQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654

Query: 304 T-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
             S G LY +G   +G LG        +P+RV GP+        S   K+++  S+G+++
Sbjct: 655 EGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPH-----SSTAKNSS--SKGRVV 707

Query: 363 TWGWGGSHGTFSEDGHSSGG---QLGHGNDVDYIHPTIVNFG 401
              + G H  FS   +++      L   +   Y  PT +  G
Sbjct: 708 RCIYAGGHHCFSTATNAADNPELPLDFRDPTPYQQPTCLTEG 749



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 163/342 (47%), Gaps = 20/342 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG+G    +    V    +      +++++CG  HT  + + G +Y  G N 
Sbjct: 6   WGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGANS 65

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG   N     +P+++S L+  V++ ++ G  H+ A++  G++  WG+N  GQ GL 
Sbjct: 66  KGQLGQDRN---QYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLA 122

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +  P P  ++ L+     +   G   S+A+T  G++ SWG    G+LG       +
Sbjct: 123 TGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLG-------I 175

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           G L +     P  +  L GV +   A G  HS  +  +G V+ +G   V ++      + 
Sbjct: 176 GTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENK 235

Query: 279 RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+L+  +     + + CG  HT +LT+ G ++ +G    G LG GS     +P +V  
Sbjct: 236 AYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVID 295

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSED 376
               S + QV+CG  HT  +  S+G++  +G  G HG   +D
Sbjct: 296 -LMGSDITQVTCGKHHTLVLEGSKGRLYAFGQ-GIHGQLGQD 335



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 173/408 (42%), Gaps = 53/408 (12%)

Query: 43  WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+ GL  G +E++ RP +      +    + CG  H++ LT  G +++ G N +
Sbjct: 111 WGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 170

Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           GQLGI   +  Y+  P  ++ L+   +V+++ G  HS A+T+ G ++ WGKN  GQLGLG
Sbjct: 171 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 230

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K  K    PT +  +     K  A G + +  +T  G V  +G G  G+LGHG      
Sbjct: 231 NKENKA--YPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 283

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFGDRAVDKMLFQEGNH 277
               + +E  PR + +L G  +     G  H+  ++   GR+Y FG     ++   E   
Sbjct: 284 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 339

Query: 278 ARRPSLISK--LPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI--DV-- 327
              P  +    +P+S         G    C+   G   ++  +N    + I  +  D+  
Sbjct: 340 CSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDIST 399

Query: 328 --------------LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
                                        +  V+CG  HT A+S+ ++   GW       
Sbjct: 400 RIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSD-RVQVLGW------- 451

Query: 374 SEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G +  GQ  L  G+  +   P I+    + + ++V CG  H+ AL
Sbjct: 452 ---GRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMAL 496



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGL--GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+ GL  G +E++ RP +      +    + CG  H++ LT  G +++ G N +
Sbjct: 451 WGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTY 510

Query: 101 GQLGISENI-GYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           GQLGI   +  Y+  P  ++ L+   +V+++ G  HS A+T+ G ++ WGKN  GQLGLG
Sbjct: 511 GQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG 570

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K  K    PT +  +     K  A G + +  +T  G V  +G G  G+LGHG      
Sbjct: 571 NKENK--SYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGS----- 623

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYIFG 263
               + +E  PR + +L G  +     G  H+  ++   GR+Y FG
Sbjct: 624 ----NYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFG 665



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 175/407 (42%), Gaps = 51/407 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-ETGCVYATGLNDF 100
           L+G G  G+LG GS  +   P          +  + CG  HTL L    G +YA G    
Sbjct: 270 LFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIH 329

Query: 101 GQLGISENIGYSLEPLRISGL-------------KKEVVQ-ISTGYHH--SSAITV--DG 142
           GQLG  E    S  P R+ G              K  VV+ I  G HH  S+A     D 
Sbjct: 330 GQLGQDEARSCS-NPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDI 388

Query: 143 ELYMWGKNSNG----QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           ++ +  ++ +     QL                  L  +  K  A G + ++AV+   +V
Sbjct: 389 QIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQV 448

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
           L WG    G+ G       L      ++  PR+++ L   +      G LHS  +  +GR
Sbjct: 449 LGWGRNDRGQCG-------LATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGR 501

Query: 259 VYIFGDRAVDKMLFQE--GNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWG 313
           ++ +GD    ++       N+  RP+ ++ L   P    V CGG+H+  LT  G ++ WG
Sbjct: 502 LFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVR-VACGGFHSFALTISGSVFGWG 560

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 372
            N+ G LG+G+ +    P  ++   S+  V  ++CG  HTA ++ +G +  +G G     
Sbjct: 561 KNDVGQLGLGNKENKSYPTLLRNMRSQM-VKHIACGQDHTAMLTADGGVFLFGQG----- 614

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  S GQLGHG++ + ++P  V         QV+CG +HT  L
Sbjct: 615 -------SEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 11/193 (5%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  YG+LG+G+L + +  RP   ++     L  +ACGG H+  LT +G V+  G ND 
Sbjct: 505 WGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDV 564

Query: 101 GQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLG+   EN  Y   P  +  ++ ++V+ I+ G  H++ +T DG ++++G+ S GQLG 
Sbjct: 565 GQLGLGNKENKSY---PTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGH 621

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG-GKVLSWGAGGSGRLGHGQESS 216
           G    +V   P KV  L G    Q   G   ++ + G  G++ ++G G  G+LG  +  S
Sbjct: 622 GSNYNEV--NPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARS 679

Query: 217 ILGFLRSTSEYTP 229
                R    + P
Sbjct: 680 CSNPQRVPGPWVP 692



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 126/282 (44%), Gaps = 30/282 (10%)

Query: 145 YMWGKNSNGQLGLGKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           + WG +  GQLG+G    +    +  +V  LSG   +  + G   +  V   G +   GA
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG  +           ++Y P  +  LE V +K  A G  H+  + + G+V  +G
Sbjct: 64  NSKGQLGQDR-----------NQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWG 112

Query: 264 --DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
             DR    +   +  +  RP ++  L   +  +V CG  H+  LT  G L++WG N  G 
Sbjct: 113 RNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQ 172

Query: 320 LGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           LGIG++   ++    +       P+ +V+CG  H+ A++  G +  WG            
Sbjct: 173 LGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWG------------ 220

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            +  GQLG GN  +  +PT++    +     ++CG +HT  L
Sbjct: 221 KNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAML 262


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 183/370 (49%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  H   +T+ G V++ G    G+LG  +  ++   L P  + GLK   V+ ++
Sbjct: 307 VQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDV---LHPKLVDGLKNTNVELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY WG +S+  G LG   +A+  +P   K+   L GI     + G 
Sbjct: 364 CGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVP--KKLNGPLEGIHVAAVSCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+          TPR ++ L+G++   AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRRSV---------STPREVESLKGLRTVRAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 473 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S++ V+++ CG 
Sbjct: 531 CQVACGHSMTVALTTTGHVYTMGSPVYGQLGNPQADG-KLPVRVEGKLSKNFVEELDCGA 589

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G+LGHG+  D   PTIV   ++ +   V
Sbjct: 590 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTIVEALKDKQVKSV 637

Query: 410 SCGFNHTGAL 419
            CG + T A+
Sbjct: 638 VCGTSFTAAI 647



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 154/355 (43%), Gaps = 56/355 (15%)

Query: 37  RRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
           RR AAL         WG    GRLG G       P +    +  +++ +ACG  H+  +T
Sbjct: 314 RRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSCAVT 373

Query: 88  ETGCVYATG--LNDFGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGE 143
            +G +Y  G   ++ G LG   N   +  P +++G  +   V  +S G  H++ +T  G+
Sbjct: 374 LSGDLYTWGGSSHNCGLLGY-RNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQ 432

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------- 193
           L+ +G  + G LG G +  + +  P +VE L G+ T +AA G   + AV           
Sbjct: 433 LFTFGDGTFGVLGHGDR--RSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490

Query: 194 --GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
               GK+ +WG G  GRLGHG + S L          P  +  L        A G   + 
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHSMTV 541

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTC 301
            +   G VY  G      +  Q GN    P    KLP          + EE+ CG YH  
Sbjct: 542 ALTTTGHVYTMGS----PVYGQLGN----PQADGKLPVRVEGKLSKNFVEELDCGAYHVA 593

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           VLTS  E+YTWG   NG LG G  D   SP  V+    +  V  V CG   TAAI
Sbjct: 594 VLTSRTEVYTWGKGANGRLGHGDTDDRSSPTIVEA-LKDKQVKSVVCGTSFTAAI 647



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 138/314 (43%), Gaps = 50/314 (15%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-------IPTKVECLSGIFTKQAA 183
           G+  S A+   G++Y+WG+ + G +  G               +P  +E    +  +  A
Sbjct: 255 GHDDSDAL---GDVYIWGEGTAGGILGGGMNGVGGSGVRTDSFVPKALESAVLLDVQTIA 311

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   +  VT  G+V SWG    GRLGHG +S +L          P+L+  L+   V++ 
Sbjct: 312 CGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLH---------PKLVDGLKNTNVELV 362

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGY 298
           A G  HS  +  +G +Y +G  + +  L    N A    P  ++   +  +   V CG +
Sbjct: 363 ACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPW 422

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT V+TS G+L+T+G    G LG G    + +P  V+       V + +CG  HTAA+ E
Sbjct: 423 HTAVVTSSGQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTV-RAACGVWHTAAVVE 481

Query: 359 -------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
                        GK+ TWG G              G+LGHG+    + PT V       
Sbjct: 482 VMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGDKESRLVPTCVAALVEPN 529

Query: 406 ALQVSCGFNHTGAL 419
             QV+CG + T AL
Sbjct: 530 FCQVACGHSMTVAL 543



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T  + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P L
Sbjct: 291 TDSFVPKALESAVLLDVQTIACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKL 350

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFS 339
           +  L  +  E V CG YH+C +T  G+LYTWG + + C  LG  +      P+++ GP  
Sbjct: 351 VDGLKNTNVELVACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLE 410

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
              V  VSCG  HTA + S G++ T+G     GTF        G LGHG+      P  V
Sbjct: 411 GIHVAAVSCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRRSVSTPREV 458

Query: 399 NFGENVKALQVSCGFNHTGALLEYV 423
              + ++ ++ +CG  HT A++E +
Sbjct: 459 ESLKGLRTVRAACGVWHTAAVVEVM 483


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P +     ++ +K +A   GG H L LT+ G +++ G  + G
Sbjct: 3317 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDG 3376

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   ++    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3377 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3435

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3436 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3488

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3489 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3544

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3545 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3604

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3605 -LDDARVNRVSCGSSHSIA 3622



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4350 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4409

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4410 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4469

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4470 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4521

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4522 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4578

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4579 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4637

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4638 LQGKKITRVACGSAHTLAWSTMK 4660



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 173/385 (44%), Gaps = 35/385 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         PV+C +        L  G    L +T  G VYATG    G+
Sbjct: 4297 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4356

Query: 103  LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG G
Sbjct: 4357 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4414

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +   P  +E L G      A G   S A+T  G + +WG G  GRLGHG      
Sbjct: 4415 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4467

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 4468 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4523

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V
Sbjct: 4524 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4583

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                    +  ++ G  H  A ++ G++ TW            G +  GQLG G      
Sbjct: 4584 AA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSALQ 4630

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             P +V+  +  K  +V+CG  HT A
Sbjct: 4631 RPRLVHALQGKKITRVACGSAHTLA 4655



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 190/388 (48%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ ++ G +YA G  
Sbjct: 3263 VWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKLYACGEG 3319

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+ ++     EP  I  L + +++   + +G  H+ A+T DG+++ WG+  +G+L
Sbjct: 3320 TNGRLGLGDDSNVC-EPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSWGEGEDGKL 3378

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3379 GHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD-- 3434

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L++ L G +V   A G     +  +  +G VY +GD    K+   
Sbjct: 3435 -------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487

Query: 274  EGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3488 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3547

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              V+G      V  V+ G  H  A+++ G++  WG         ++ H   GQ G+G+ +
Sbjct: 3548 TLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGSTI 3594

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P++V+  ++ +  +VSCG +H+ A
Sbjct: 3595 VNKKPSLVHELDDARVNRVSCGSSHSIA 3622



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 3261 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3310

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +   +  P  +  LS    K+ A+  G + ++A+T  GK+ 
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIF 3368

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3369 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3419

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      +V CG     T  LT+ G +Y+WG  
Sbjct: 3420 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3479

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
            + G LG G  D  ++P   +R+ G      V Q+ CG + + A+++ G++ TWG G    
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3534

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3535 -----------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3573



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 40/317 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  +P +  + +   ++ +ACG  H+  +T +G +Y  GL ++G+
Sbjct: 3370 WGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3429

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +        L  S + + V+Q++ G     + A+T DG +Y WG    G+LG G  
Sbjct: 3430 LGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3489

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 P+   ++ L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 3490 DGCYTPL--LIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 3544

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P L++ L G KV   A G LH   + + G+VY +GD        Q+GN +  
Sbjct: 3545 ------RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGSTI 3594

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              ++PSL+ +L  +    V CG  H+       +  T                 ++ E V
Sbjct: 3595 VNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAT-----------------NNQEPV 3637

Query: 335  QGPFSESPVDQVSCGWK 351
              P  + P+ Q+S  +K
Sbjct: 3638 MFPTEKDPLGQISLTFK 3654



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4350

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4351 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4408

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4409 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4459

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4460 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4519

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G  D    P +++   +   V +V CG + + A++  G I TWG G  H           
Sbjct: 4520 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4567

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4568 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4603



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 139/307 (45%), Gaps = 32/307 (10%)

Query: 124  EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            E+VQ      H S        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 3240 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3297

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G +S++           P+LI  L    +K 
Sbjct: 3298 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3348

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
             A  +G  H+  + ++G+++ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3349 MAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3408

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AA 355
            H+  +TS GELYTWG  E G LG G       P+ VQ    +  V QV+CG +     A 
Sbjct: 3409 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR-VIQVACGSRDAQTMAL 3467

Query: 356  ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
             ++G + +WG     G F        G+LG G       P +++    +  +Q+ CG   
Sbjct: 3468 TADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3515

Query: 416  TGALLEY 422
            + AL +Y
Sbjct: 3516 SLALTKY 3522



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LT+   VY+ G  D G+LG  + + Y    L  + + K +  I+ G  +S+ ++
Sbjct: 514 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 573

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
            +GELY WG+ + G+LG G   +  + IPT V  L+G      A G    Q++ VT  G 
Sbjct: 574 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTASGI 631

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G               TP+++ +L  + V     G   SA +   G
Sbjct: 632 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 682

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P +I  L     +E+  G +H   LT    +Y WG N
Sbjct: 683 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRN 742

Query: 316 ENG 318
           + G
Sbjct: 743 DYG 745



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 31/313 (9%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C A  +  +K L C     + L+ +G VY        Q            P R+ G 
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 500

Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++ V +   +    H  A+T D  +Y WG    G+LG G +       P  VE L    
Sbjct: 501 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 558

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S  ++  G++ +WG G  GRLGHG   ++L          P L+  L G 
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 609

Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
            V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      +V 
Sbjct: 610 MVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 669

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CGG  +  LT+ GE+YTWG  E   LG G+ + +  P+ ++       V ++  G  H  
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LXTKKVKELCVGNFHVL 728

Query: 355 AISEGKILTWGWG 367
           A++E + L +GWG
Sbjct: 729 ALTEDQ-LVYGWG 740



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  A    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 529 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 588

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGL 157
           L  G S+N+   L P  ++ L    VV ++ G   S    +T  G ++ WG  + G+LG 
Sbjct: 589 LGHGNSDNV---LIPTLVTALNGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 645

Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G K  K+      V+ L  I   +   G + S A+T  G+V +WG G   RLGHG 
Sbjct: 646 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 699

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           E  I           P++I+ L   KVK    G  H   + E+  VY +G     ++   
Sbjct: 700 EEHI---------RYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 750

Query: 274 EGNHARRPSLISKL 287
            G     P+L   L
Sbjct: 751 LGTVVPEPTLCPTL 764



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 105/237 (44%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG                P+L++ L    +   A G  +
Sbjct: 518 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 568

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 569 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCVTA 628

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +++WG    G LG G  D   +P+ V     +  V +V CG + +AA++  G++ TW
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTPKIVDK-LLDINVAKVYCGGQFSAALTAYGEVYTW 687

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G             G +LGHGN+    +P ++      K  ++  G  H  AL E
Sbjct: 688 GKG------------EGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTE 732



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 694

Query: 103 LG--ISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E+I Y   P  I  L  K+V ++  G  H  A+T D  +Y WG+N  GQ  +  
Sbjct: 695 LGHGNEEHIRY---PKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 749

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
               V+P PT    LSG      A G  QS A
Sbjct: 750 ALGTVVPEPTLCPTLSGKNIIGLACGLTQSFA 781



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   + P L   L     V + GG  T + +T+ G++Y  G    G LGIG  D +  P
Sbjct: 4309 EGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP 4368

Query: 332  ---ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
               E +Q  F +     V+ G KH  A+S EG + +WG G              G+LGHG
Sbjct: 4369 TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHG 4414

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            N + Y  P ++      + + ++CG +H+ A+
Sbjct: 4415 NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4446



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG  ++ VL+S GELYTWG    G LG G+ D +  P  V    +   V  V+CG   
Sbjct: 562 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVVHVACGSGD 620

Query: 353 TAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           +  +   + G + +WG G              G+LG G       P IV+   ++   +V
Sbjct: 621 SQTLCVTASGIVFSWGDGNY------------GKLGRGGCDGSKTPKIVDKLLDINVAKV 668

Query: 410 SCGFNHTGALLEY 422
            CG   + AL  Y
Sbjct: 669 YCGGQFSAALTAY 681


>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
           Kuenenia stuttgartiensis]
          Length = 387

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/283 (33%), Positives = 143/283 (50%), Gaps = 19/283 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS +S   P+     E   + A++CGG H L L   G V+A G+ND GQ
Sbjct: 111 WGGNWAGQLGDGSYKSSNIPIKTK--ELSGIIAISCGGQHNLALKSDGTVWAWGINDKGQ 168

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LGI +     + P+RI GL   +V IS G +HS AI  DG L+ WG N+  QLG G    
Sbjct: 169 LGIGDAKNQQI-PIRIPGL-NNIVAISAGGYHSLAIKSDGSLWAWGSNNMEQLGDGSATN 226

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L  I       G + S+A+   G +++WG+ G  +LG G          
Sbjct: 227 RCSPV--HVSNLRDIIAVNG--GGDFSLALKSDGTIMAWGSNGLSQLGDGT--------- 273

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  + ++  + ++IAA G  HS  +   G+V+ FG         +    A RP 
Sbjct: 274 TTNRNTPVNVSDVRDI-IEIAAKGN-HSLALTIEGKVWEFGSIGATPTEKEVTLPAYRPV 331

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           L++++     + CG +H  VL + G L+ WG N  G LG G++
Sbjct: 332 LVNEITDVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDGTV 374



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 160/357 (44%), Gaps = 35/357 (9%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           V ++F       +A G  HTL L   G +++ G N++GQLG    I     P+++  L  
Sbjct: 30  VKTSFAVQVAPKIAAGAFHTLALKPDGSLWSWGKNEYGQLG-DGTIKNKHSPVQVKHLSS 88

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +V I  G  HS A+  DG ++ WG N  GQLG G   +  IPI TK   LSGI     +
Sbjct: 89  IIV-IDGGAWHSIALKSDGTVWAWGGNWAGQLGDGSYKSSNIPIKTKE--LSGIIA--IS 143

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G + ++A+   G V +WG    G+LG G          + ++  P  I  L  + V I+
Sbjct: 144 CGGQHNLALKSDGTVWAWGINDKGQLGIGD---------AKNQQIPIRIPGLNNI-VAIS 193

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           A G+ HS  I  +G ++ +G   ++++      +   P  +S L     V  GG  +  L
Sbjct: 194 AGGY-HSLAIKSDGSLWAWGSNNMEQLGDGSATNRCSPVHVSNLRDIIAVNGGGDFSLAL 252

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
            S G +  WGSN    LG G+    ++P  V        + +++    H+ A++ EGK+ 
Sbjct: 253 KSDGTIMAWGSNGLSQLGDGTTTNRNTPVNVS---DVRDIIEIAAKGNHSLALTIEGKV- 308

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            W +G    T +E   +          +    P +VN  E    + ++CG  H   L
Sbjct: 309 -WEFGSIGATPTEKEVT----------LPAYRPVLVN--EITDVIAIACGEFHNVVL 352



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 12/129 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+  +R  PV  S  +   +  +A  G H+L LT  G V+     +FG 
Sbjct: 261 WGSNGLSQLGDGTTTNRNTPVNVS--DVRDIIEIAAKGNHSLALTIEGKVW-----EFGS 313

Query: 103 LGIS----ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G +    E    +  P+ ++ +  +V+ I+ G  H+  +  DG L++WG N+ GQLG G
Sbjct: 314 IGATPTEKEVTLPAYRPVLVNEIT-DVIAIACGEFHNVVLKNDGSLWVWGINNFGQLGDG 372

Query: 159 KKAAKVIPI 167
              +K  P+
Sbjct: 373 TVGSKTKPV 381


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  133 bits (334), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 159/323 (49%), Gaps = 21/323 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P         S+  ++ G +H+L LT+ G V+A GLN  GQ
Sbjct: 94  WGDNTNGQLGDGTTTGRQTPTPAQGLP--SVAQVSAGESHSLALTDDGRVFAWGLNSSGQ 151

Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++ GL  +  +  ++ G +HS A+T DG ++ WGKNS+GQLG    
Sbjct: 152 LG-DGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNST 210

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               IP+  +V+ L    T  AA G   S+A+T  G++ +WG   SG+LG G  S     
Sbjct: 211 VDSSIPV--QVQGLPANVTAVAA-GGNHSLALTSDGRIYAWGLNSSGQLGDGTTS----- 262

Query: 221 LRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               +  TP L+  L  G K    +AG  HS  + ++G VY +G  +  ++       + 
Sbjct: 263 ----NSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASE 318

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++ L     V  GG  +  LTS G +Y WG N +G LG G+    ++P RV    S
Sbjct: 319 MPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLS 378

Query: 340 ESPV---DQVSCGWKHTAAISEG 359
              +    Q+S G  +  A+S G
Sbjct: 379 TGALLTDLQLSDGSSNPIALSPG 401



 Score =  126 bits (316), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 115/356 (32%), Positives = 170/356 (47%), Gaps = 42/356 (11%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A++ GG+H+L LT    V+A G N  GQLG     G    P    GL   V Q+S G  H
Sbjct: 74  AVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQ-TPTPAQGL-PSVAQVSAGESH 131

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVT 193
           S A+T DG ++ WG NS+GQLG G  A    P+  +V+ L+   T K  A G   S+A+T
Sbjct: 132 SLALTDDGRVFAWGLNSSGQLGDGTTADSRTPV--QVQGLATDSTIKVVAAGGNHSLALT 189

Query: 194 GGGKVLSWGAGGSGRLGHGQ--ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
             G+V +WG   SG+LG+    +SSI           P  ++ L    V   AAG  HS 
Sbjct: 190 SDGRVFAWGKNSSGQLGNNSTVDSSI-----------PVQVQGLPA-NVTAVAAGGNHSL 237

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
            +  +GR+Y +G  +  ++     +++  P L++ LP   +   V  G  H+  L   G 
Sbjct: 238 ALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGT 297

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           +Y WG N  G LG G+      P +V G    + V  VS G   + A+ S+G +  WG  
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTG---LANVTAVSAGGSDSLALTSDGYVYAWGL- 353

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHP----TIVNFGENVKALQVSCGFNHTGAL 419
                      +S GQLG G   +   P    ++++ G  +  LQ+S G ++  AL
Sbjct: 354 -----------NSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSSNPIAL 398


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 168/352 (47%), Gaps = 30/352 (8%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
           ++ACG  H++F+T +G  ++ G ND+GQLG        + P  +  LK K  + ++ G  
Sbjct: 46  SVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKAL-VNPRCVKALKDKRAILVACGRS 104

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+   T D ++Y +G NS  QLG+ K +A     P  V  L+G+  K    G + S+A++
Sbjct: 105 HTLVATDDKKVYAFGINSEHQLGV-KSSAAYHADPQLVATLNGVQVKALTAGADHSLALS 163

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V  WG+   G+LG G         R      P  +K  EG  + I+A  + HSA +
Sbjct: 164 AKGIVYLWGSSEHGQLGLG---------RKKQRKLPVQLK-TEGKAIAISAGAY-HSAYV 212

Query: 254 DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSGGELYT 311
           + +G +Y FG+    K+         R+PS +  +      V CGG HT  LT  G  Y+
Sbjct: 213 NTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYS 272

Query: 312 WGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
           +G    G LG+G   V H+  P  +Q P +   + +VS G  HTA +SEG+ +     G 
Sbjct: 273 FGDGSQGQLGLGQ-RVTHAGRPHLIQMP-TGVKMARVSAGQSHTAFLSEGRQMYTCGEGR 330

Query: 370 HGTFS-EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           HG  + EDG     +           P +V+     +  QVSCG  HT  L+
Sbjct: 331 HGKLALEDGEMGSNKFS---------PMLVDILSLFQVQQVSCGGCHTLVLV 373



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 151/324 (46%), Gaps = 33/324 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+ DYG+LG G  ++   P    A +      +ACG +HTL  T+   VYA G+N   Q
Sbjct: 66  FGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSHTLVATDDKKVYAFGINSEHQ 125

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+  +  Y  +P  ++ L   +V  ++ G  HS A++  G +Y+WG + +GQLGLG+K 
Sbjct: 126 LGVKSSAAYHADPQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKK 185

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  K E  +   +     G   S  V   G + ++G    G+LG          L
Sbjct: 186 QRKLPVQLKTEGKAIAISA----GAYHSAYVNTDGVLYTFGETEHGKLGTN--------L 233

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARR 280
                  P  + +++G+   +A  G  H+  +  +GR Y FGD +  ++ L Q   HA R
Sbjct: 234 APKKCRKPSKVPDIQGLVTSVACGGS-HTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGR 292

Query: 281 PSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P LI ++P       V  G  HT  L+ G ++YT G   +G L       L   E     
Sbjct: 293 PHLI-QMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL------ALEDGEMGSNK 345

Query: 338 FSESPVD--------QVSCGWKHT 353
           FS   VD        QVSCG  HT
Sbjct: 346 FSPMLVDILSLFQVQQVSCGGCHT 369



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 37/305 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V+ ++ G  HS  IT  G  + +G N  GQLG G   A V P      C+  +  K+A L
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNP-----RCVKALKDKRAIL 98

Query: 185 ---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVK 239
              G   ++  T   KV ++G     +LG          ++S++ Y   P+L+  L GV+
Sbjct: 99  VACGRSHTLVATDDKKVYAFGINSEHQLG----------VKSSAAYHADPQLVATLNGVQ 148

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           VK   AG  HS  +   G VY++G     ++        + P  +     +  +  G YH
Sbjct: 149 VKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGKAIAISAGAYH 208

Query: 300 TCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
           +  + + G LYT+G  E+G LG   +      P +V  P  +  V  V+CG  HT A++ 
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKV--PDIQGLVTSVACGGSHTVALTC 266

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHT 416
           +G+  ++G G            S GQLG G  V +   P ++     VK  +VS G +HT
Sbjct: 267 DGRAYSFGDG------------SQGQLGLGQRVTHAGRPHLIQMPTGVKMARVSAGQSHT 314

Query: 417 GALLE 421
             L E
Sbjct: 315 AFLSE 319



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 9/227 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           LWG+ ++G+LGLG  + R  PV      K    A++ G  H+ ++   G +Y  G  + G
Sbjct: 170 LWGSSEHGQLGLGRKKQRKLPVQLKTEGK--AIAISAGAYHSAYVNTDGVLYTFGETEHG 227

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG +       +P ++  ++  V  ++ G  H+ A+T DG  Y +G  S GQLGLG++ 
Sbjct: 228 KLGTNLAPKKCRKPSKVPDIQGLVTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRV 287

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  ++  +G+   + + G   +  ++ G ++ + G G  G+L    E   +G  
Sbjct: 288 THA-GRPHLIQMPTGVKMARVSAGQSHTAFLSEGRQMYTCGEGRHGKL--ALEDGEMG-- 342

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
             +++++P L+  L   +V+  + G  H+  +   G     G+R  D
Sbjct: 343 --SNKFSPMLVDILSLFQVQQVSCGGCHTLVLVVPGLTDPQGNRMGD 387


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  133 bits (334), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 159/344 (46%), Gaps = 41/344 (11%)

Query: 86   LTETGCVYATGLNDFGQ-----LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            LTE G VY  G           LGI + I   L P ++  L  +VV +S G+ H +A+  
Sbjct: 764  LTENGDVYLWGRGAVKTPAVPILGIPQ-IEDQLLPFKLESLS-DVVSVSIGFCHGAAVRA 821

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            +GEL  WG   NGQLG G    ++   P  ++ L+  +  Q   G + ++ +T  GKV S
Sbjct: 822  NGELLTWGVGENGQLGHGDTNNQI--EPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYS 879

Query: 201  WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            WGA   G+LG G           T   +P  +  LE   V   A+G  H A +  +  V 
Sbjct: 880  WGASEYGQLGLGD---------VTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVL 930

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            +FG+ A         +    P+L+  L Y   + + CG Y T  +T  G++YTWG+ +  
Sbjct: 931  VFGNGAA----MGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQE- 985

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
             LG G      SP+ ++   ++S + Q+SCG +HTA +++ G+I T G      +F + G
Sbjct: 986  -LGHGGNSTETSPKLIEALRNQS-IRQISCGGRHTAFLTDSGRIFTCG----KDSFGQLG 1039

Query: 378  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              SG         D   P  +        + VSCG N+  AL +
Sbjct: 1040 QMSG---------DQNKPKRIESLTKTTFISVSCGENYNVALFD 1074



 Score =  114 bits (286), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 131/264 (49%), Gaps = 22/264 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G   ++  P +  +     +  + CG  HT+ LT+ G VY+ G +++GQ
Sbjct: 828  WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG+ +   +S  P+++S L+K  V+QI++G  H + +T   E+ ++G       G    A
Sbjct: 888  LGLGDVTQHS-SPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN------GAAMGA 940

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            A V+ +PT V  L  +   +   G   + A+T  G V +WG G    LGHG  S      
Sbjct: 941  ASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTG--QELGHGGNS------ 992

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               +E +P+LI+ L    ++  + G  H+A + ++GR++  G  +  ++    G+   +P
Sbjct: 993  ---TETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGDQ-NKP 1048

Query: 282  SLISKLPYSE--EVVCGGYHTCVL 303
              I  L  +    V CG  +   L
Sbjct: 1049 KRIESLTKTTFISVSCGENYNVAL 1072



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 88/328 (26%), Positives = 134/328 (40%), Gaps = 47/328 (14%)

Query: 134  HSSAITVDGE--LYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H SAI +D    L  WG  SN +LG    A  +  P P ++   +       + G   S 
Sbjct: 703  HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSS 762

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T  G V  WG G            ILG  +   +  P  ++ L  V V ++  GF H 
Sbjct: 763  VLTENGDVYLWGRGAV----KTPAVPILGIPQIEDQLLPFKLESLSDV-VSVSI-GFCHG 816

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
            A +  NG +  +G     ++   + N+   P +I  L   +  +V CG  HT  LT  G+
Sbjct: 817  AAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGK 876

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWG 367
            +Y+WG++E G LG+G +    SP +V     +  V Q++ G  H A ++  K +L +G G
Sbjct: 877  VYSWGASEYGQLGLGDVTQHSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935

Query: 368  GSHGTFSED-------------------GHSS---------------GGQLGHGNDVDYI 393
             + G  S                     GH S               G +LGHG +    
Sbjct: 936  AAMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTET 995

Query: 394  HPTIVNFGENVKALQVSCGFNHTGALLE 421
             P ++    N    Q+SCG  HT  L +
Sbjct: 996  SPKLIEALRNQSIRQISCGGRHTAFLTD 1023


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 159/361 (44%), Gaps = 35/361 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+GRLG GS      PV  S      + A+A GGAHT  LT +G V+  G N +GQ
Sbjct: 77  WGGNDFGRLGDGSYTDSSTPVAVSGLPS-GVTAIAAGGAHTCALTSSGEVWCWGSNFYGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A T  G ++ WG N  GQLG G    
Sbjct: 136 LGDGSYTTRS-TPVAVSGLPSGVTAIAAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTD 194

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      +SG+ ++  A+  G   + A    G+V  WG    G+LG G        
Sbjct: 195 RSTPVA-----VSGLPSEVTAIAAGDAHTCARMSSGEVWCWGGNNYGQLGDGSY------ 243

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T   TP  +  L      IAA G +H+  +  +G V  +G     ++          
Sbjct: 244 ---TDSSTPVAVSGLPSGVTAIAAGG-VHTCALTGSGGVRCWGANYSGQLGNGLTFGRST 299

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P  +S LP     +  G YHTC LT  G ++ WG N +G LG G+     +P  V G   
Sbjct: 300 PGAVSGLPSGVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGDGTTTARSTPVAVSG--L 357

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S V+ ++ G  HT A+ S G +  W            GH+  GQLG G       P  V
Sbjct: 358 PSGVETIAAGDYHTCALMSSGGVRCW------------GHNDRGQLGDGTTTARSTPVAV 405

Query: 399 N 399
           +
Sbjct: 406 S 406



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 169/381 (44%), Gaps = 33/381 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG G+  +R  PV  S      + A+A G  HT   T +G V+  G N  GQ
Sbjct: 383 WGHNDRGQLGDGTTTARSTPVAVSGLPS-GVTAIAAGRLHTCARTSSGGVWCWGDNSDGQ 441

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P+ +SGL   V  I+ G  H+ A+T  G ++ WG+N++GQLG G    
Sbjct: 442 LG-DGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIY 500

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+   V  L    T  AA G   + A+TG G V  WG   +G+LG G          
Sbjct: 501 HITPV--AVSGLPSGVTAIAAGGV-HTCALTGSGGVWCWGGNFAGQLGDGT--------- 548

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   TP  +  L    V   AAG +H+  +  +G V+ +G     ++      +   P 
Sbjct: 549 TTDRSTPVAVSGLP-SGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPV 607

Query: 283 LISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSE 340
            +S LP     +  G  +TC LT  G ++ WG N +G L  G+     +P  V G P   
Sbjct: 608 AVSGLPSGVTAIAAGLRYTCALTGSGGVWCWGYNLSGQLDDGTTS-RSTPVAVSGLPSGV 666

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           + +   + GW   A  S G +  WG  GS            GQLG G       P  V+ 
Sbjct: 667 TAI--AAGGWYTCARTSSGGVRCWGANGS------------GQLGDGTTTKRSTPVAVS- 711

Query: 401 GENVKALQVSCGFNHTGALLE 421
           G       ++ G  HT AL+ 
Sbjct: 712 GLPSGVTAIAAGGEHTCALMS 732



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 158/358 (44%), Gaps = 30/358 (8%)

Query: 66  SAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           S+F     + A+A GG HT   T +G V+  G NDFG+LG       S  P+ +SGL   
Sbjct: 47  SSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSS-TPVAVSGLPSG 105

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  I+ G  H+ A+T  GE++ WG N  GQLG G    +  P+   V  L    T  AA 
Sbjct: 106 VTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPV--AVSGLPSGVTAIAAG 163

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  + A T  G V  WG    G+LG G          +T   TP  +  L   +V   A
Sbjct: 164 GW-HTCARTSSGGVWCWGGNYRGQLGDGT---------TTDRSTPVAVSGLP-SEVTAIA 212

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVL 303
           AG  H+     +G V+ +G     ++       +  P  +S LP     +  GG HTC L
Sbjct: 213 AGDAHTCARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCAL 272

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           T  G +  WG+N +G LG G      +P  V G    S V  ++ G  HT A++ G    
Sbjct: 273 TGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSG--LPSGVTAIAAGDYHTCALT-GSGGV 329

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           W WGG++           GQLG G       P  V+ G       ++ G  HT AL+ 
Sbjct: 330 WCWGGNY----------SGQLGDGTTTARSTPVAVS-GLPSGVETIAAGDYHTCALMS 376



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 119/378 (31%), Positives = 161/378 (42%), Gaps = 30/378 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G    R  P   S      + A+A G  HT  LT +G V+  G N  GQ
Sbjct: 281 WGANYSGQLGNGLTFGRSTPGAVSGLPS-GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQ 339

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G +H+ A+   G +  WG N  GQLG G   A
Sbjct: 340 LGDGTTTARS-TPVAVSGLPSGVETIAAGDYHTCALMSSGGVRCWGHNDRGQLGDGTTTA 398

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A T  G V  WG    G+LG G          
Sbjct: 399 RSTPV--AVSGLPSGVTAIAA-GRLHTCARTSSGGVWCWGDNSDGQLGDGSF-------- 447

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L    V+  AAG  H+  +  +G V+ +G     ++      +   P 
Sbjct: 448 -TDSSTPVAVSGLA-SGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPV 505

Query: 283 LISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S LP     +  GG HTC LT  G ++ WG N  G LG G+     +P  V G    S
Sbjct: 506 AVSGLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSG--LPS 563

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
            V  ++ G  HT A++ G    W WGG+   F        GQLG G   +   P  V+ G
Sbjct: 564 GVTAIAAGDIHTCALT-GSGGVWCWGGND--F--------GQLGDGTTTNRSTPVAVS-G 611

Query: 402 ENVKALQVSCGFNHTGAL 419
                  ++ G  +T AL
Sbjct: 612 LPSGVTAIAAGLRYTCAL 629



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 132/284 (46%), Gaps = 21/284 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS      PV  S      + A+A GG HT  LT +G V+  G N  GQ
Sbjct: 485 WGRNNSGQLGDGSTIYHITPVAVSGLPS-GVTAIAAGGVHTCALTGSGGVWCWGGNFAGQ 543

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+T  G ++ WG N  GQLG G    
Sbjct: 544 LGDGTTTDRS-TPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTN 602

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L    T  AA G   + A+TG G V  WG   SG+L  G          
Sbjct: 603 RSTPV--AVSGLPSGVTAIAA-GLRYTCALTGSGGVWCWGYNLSGQLDDG---------- 649

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +TS  TP  +  L      IAA G+ ++     +G V  +G     ++   +G   +R  
Sbjct: 650 TTSRSTPVAVSGLPSGVTAIAAGGW-YTCARTSSGGVRCWGANGSGQL--GDGTTTKRST 706

Query: 281 PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           P  +S LP     +  GG HTC L S G ++ WG N++G LG G
Sbjct: 707 PVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDG 750



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 83/172 (48%), Gaps = 6/172 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+  +R  PV  S      + A+A G  +T  LT +G V+  G N  GQ
Sbjct: 587 WGGNDFGQLGDGTTTNRSTPVAVSGLPS-GVTAIAAGLRYTCALTGSGGVWCWGYNLSGQ 645

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           L   +       P+ +SGL   V  I+ G  ++ A T  G +  WG N +GQLG G    
Sbjct: 646 L--DDGTTSRSTPVAVSGLPSGVTAIAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTK 703

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           +  P+   V  L    T  AA G E + A+   G V  WG   SG+LG G+ 
Sbjct: 704 RSTPV--AVSGLPSGVTAIAA-GGEHTCALMSSGGVWCWGRNDSGQLGDGRP 752



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 88/200 (44%), Gaps = 24/200 (12%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           TS ++P     L+GV     AAG  H+     +G V+ +G     ++       +  P  
Sbjct: 46  TSSFSP-----LQGVTAI--AAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVA 98

Query: 284 ISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSES 341
           +S LP     +  GG HTC LTS GE++ WGSN  G LG GS     +P  V G P   +
Sbjct: 99  VSGLPSGVTAIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLPSGVT 158

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
            +   + GW   A  S G +  W WGG++           GQLG G   D   P  V+ G
Sbjct: 159 AI--AAGGWHTCARTSSGGV--WCWGGNY----------RGQLGDGTTTDRSTPVAVS-G 203

Query: 402 ENVKALQVSCGFNHTGALLE 421
              +   ++ G  HT A + 
Sbjct: 204 LPSEVTAIAAGDAHTCARMS 223



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 3/136 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+L  G+  SR  PV  S      + A+A GG +T   T +G V   G N  GQ
Sbjct: 638 WGYNLSGQLDDGT-TSRSTPVAVSGLPS-GVTAIAAGGWYTCARTSSGGVRCWGANGSGQ 695

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL   V  I+ G  H+ A+   G ++ WG+N +GQLG G+   
Sbjct: 696 LGDGTTTKRS-TPVAVSGLPSGVTAIAAGGEHTCALMSSGGVWCWGRNDSGQLGDGRPLY 754

Query: 163 KVIPIPTKVECLSGIF 178
           +  P+        G++
Sbjct: 755 RTTPVDVVTSASWGVY 770


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 48/371 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 425

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM-LPVRVEGKLHKNFVEEISCG 593

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   
Sbjct: 594 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQVRT 641

Query: 409 VSCGFNHTGAL 419
           V CG N T A+
Sbjct: 642 VVCGINFTAAI 652



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D   SP  V+    +  V  V CG   TAAI
Sbjct: 622 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 652



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 419

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVPREVESLK 467

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVM 488


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 160/357 (44%), Gaps = 28/357 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE-TGCVYATGLNDFG 101
           WG G+ G+LG G  E R  P    +       ++ CG  +++ +      VY+ G  DFG
Sbjct: 34  WGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFG 93

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   ++     P  +  L  + V  ++ G  H+   T +G+L+ +G+N NGQ GLG  
Sbjct: 94  RLGTG-DVKDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLG-- 150

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +    P  V  L G      A G E S+ VT  G+V  WG G  G +G G+       
Sbjct: 151 SIQDCLEPQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGE------- 203

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             S   + P L K LEGVKV     G+ HS  +DE G +Y +G  A  +++  +      
Sbjct: 204 --SQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYV 261

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  +     V  G  HT    S G L+  G N+ G  G+G  + +   ++V+    E
Sbjct: 262 PKRVEAVQQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGE 321

Query: 341 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
             V QV  GWKHT A++  GK  +W            G +  GQLGH    D   P 
Sbjct: 322 RVV-QVKSGWKHTMAVTHTGKFFSW------------GRNVNGQLGHSGMQDSNSPV 365



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 154/351 (43%), Gaps = 33/351 (9%)

Query: 76  LACGGAHTLFLTET---GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           LACG +H+L L  T     V + G  + GQLG  +           S L +    +  G 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71

Query: 133 HHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +S A+   D ++Y WG    G+LG G    K + IP  +  L+G      A G   ++ 
Sbjct: 72  EYSMAVAGGDKQVYSWGWGDFGRLGTGD--VKDVFIPCPLPALAGRRVASVACGDTHTLV 129

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            T  G++ ++G   +G+ G       LG ++   E  P+L+  L+G +V   A G  HS 
Sbjct: 130 ATAEGQLFAFGRNQNGQCG-------LGSIQDCLE--PQLVTALQGKEVVAVACGAEHSM 180

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
           C+   G VY +G      +   E      P+L   L      +V CG  H+  +  GG +
Sbjct: 181 CVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVDEGGAM 240

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGG 368
           YTWG      L  G     + P+RV+   +   V  V+ GW+HT AA S+G++   GW  
Sbjct: 241 YTWGWGAYAQLMQGDRKDHYVPKRVE---AVQQVATVAGGWRHTMAADSQGRLFASGW-- 295

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               F + G      +GH  DV  +       GE V  +QV  G+ HT A+
Sbjct: 296 --NKFGQCG------VGHNEDVVRVQQVEALAGERV--VQVKSGWKHTMAV 336



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 122/305 (40%), Gaps = 79/305 (25%)

Query: 122 KKEVVQISTGYHHSSAI--TVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           + EV+ ++ G  HS A+  T  G + + WG+  +GQLG G   A+    P  V  L    
Sbjct: 6   EPEVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGD--AEDRQEPQAVFSLLHRG 63

Query: 179 TKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                 G E S+AV GG K V SWG G  GRLG G    +         + P  +  L G
Sbjct: 64  ATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDV---------FIPCPLPALAG 114

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
            +V                                                    V CG 
Sbjct: 115 RRVA--------------------------------------------------SVACGD 124

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
            HT V T+ G+L+ +G N+NG  G+GSI     P+ V        V  V+CG +H+  + 
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTA-LQGKEVVAVACGAEHSMCVT 183

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           SEG++  WGWG              G +G G   D   PT+    E VK  QV+CG+ H+
Sbjct: 184 SEGEVYCWGWG------------RYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHS 231

Query: 417 GALLE 421
            A+ E
Sbjct: 232 IAVDE 236


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 155/319 (48%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P +     ++ +K +A   GG H L LT+ G +++ G  + G
Sbjct: 3312 GEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDG 3371

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   ++    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3372 KLGHGNSVSLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3430

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3431 ATQM--KPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3483

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3484 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3539

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3540 RKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3599

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3600 -LDDARVNRVSCGSSHSIA 3617



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4317 GYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4376

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4377 KLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4436

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4437 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4488

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4489 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4545

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4546 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4604

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4605 LQGKKITRVACGSAHTLAWSTMK 4627



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 173/385 (44%), Gaps = 35/385 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         PV+C +        L  G    L +T  G VYATG    G+
Sbjct: 4264 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGR 4323

Query: 103  LGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG G
Sbjct: 4324 LGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG 4381

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +   P  +E L G      A G   S A+T  G + +WG G  GRLGHG      
Sbjct: 4382 NRL--MYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD----- 4434

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 4435 ----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSD 4490

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V
Sbjct: 4491 GCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKV 4550

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                    +  ++ G  H  A ++ G++ TW            G +  GQLG G      
Sbjct: 4551 AA-LQGKKIISIATGSLHCVACTDKGEVFTW------------GDNDEGQLGDGTTSALQ 4597

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             P +V+  +  K  +V+CG  HT A
Sbjct: 4598 RPRLVHALQGKKITRVACGSAHTLA 4622



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 190/388 (48%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ ++ G +YA G  
Sbjct: 3258 VWGLNDKDQLG-GLKGSKIKLPVYSEVLSK--LKPIHIAGGSKTLFVVSQEGKLYACGEG 3314

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+ ++     EP  I  L + +++   + +G  H+ A+T DG+++ WG+  +G+L
Sbjct: 3315 TNGRLGLGDDSNVC-EPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSWGEGEDGKL 3373

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3374 GHGNSVS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGD-- 3429

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L++ L G +V   A G     +  +  +G VY +GD    K+   
Sbjct: 3430 -------TATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482

Query: 274  EGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3483 GSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKP 3542

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              V+G      V  V+ G  H  A+++ G++  WG         ++ H   GQ G+G+ +
Sbjct: 3543 TLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGSTI 3589

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P++V+  ++ +  +VSCG +H+ A
Sbjct: 3590 VNKKPSLVHELDDARVNRVSCGSSHSIA 3617



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 3256 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQ----------E 3305

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +   +  P  +  LS    K+ A+  G + ++A+T  GK+ 
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSN--VCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIF 3363

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3364 SWGEGEDGKLGHGN---------SVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3414

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      +V CG     T  LT+ G +Y+WG  
Sbjct: 3415 YTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDG 3474

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
            + G LG G  D  ++P   +R+ G      V Q+ CG + + A+++ G++ TWG G    
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3529

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3530 -----------RLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTD 3568



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATG 4317

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4318 YGAAGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4375

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4376 GKLGHGNR---LMYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4426

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4427 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4486

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G  D    P +++   +   V +V CG + + A++  G I TWG G  H           
Sbjct: 4487 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4534

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4535 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4570



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 139/307 (45%), Gaps = 32/307 (10%)

Query: 124  EVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            E+VQ      H S        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 3235 EIVQEQMNLQHGSEPPPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIHI 3292

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G +S++           P+LI  L    +K 
Sbjct: 3293 AGGSKTLFVVSQEGKLYACGEGTNGRLGLGDDSNVC---------EPKLIPFLSQYMIKK 3343

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGY 298
             A  +G  H+  + ++G+++ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3344 VAVHSGGKHALALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSG 3403

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AA 355
            H+  +TS GELYTWG  E G LG G       P+ VQ    +  V QV+CG +     A 
Sbjct: 3404 HSAAITSSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR-VIQVACGSRDAQTMAL 3462

Query: 356  ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
             ++G + +WG     G F        G+LG G       P +++    +  +Q+ CG   
Sbjct: 3463 TADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQF 3510

Query: 416  TGALLEY 422
            + AL +Y
Sbjct: 3511 SLALTKY 3517



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 113/243 (46%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LT+   VY+ G  D G+LG  + + Y    L  + + K +  I+ G  +S+ ++
Sbjct: 506 GTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLS 565

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
            +GELY WG+ + G+LG G   +  + IPT V  L+G      A G    Q++ VT  G 
Sbjct: 566 SNGELYTWGRGNYGRLGHGN--SDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGI 623

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G               TP+++ +L  + V     G   SA +   G
Sbjct: 624 VFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 674

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P +I  L     +E+  G +H   LT    +Y WG N
Sbjct: 675 EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRN 734

Query: 316 ENG 318
           + G
Sbjct: 735 DYG 737



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 31/313 (9%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C A  +  +K L C     + L+ +G VY        Q            P R+ G 
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGSETQY-----------PQRVYGF 492

Query: 122 KKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            ++ V +   +    H  A+T D  +Y WG    G+LG G +       P  VE L    
Sbjct: 493 SEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVW--YDEPKLVEALVDKN 550

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               A G   S  ++  G++ +WG G  GRLGHG   ++L          P L+  L G 
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVL---------IPTLVTALNGH 601

Query: 239 KVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
            V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      +V 
Sbjct: 602 MVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVY 661

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CGG  +  LT+ GE+YTWG  E   LG G+ + +  P+ ++       V ++  G  H  
Sbjct: 662 CGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEV-LKPKKVKELCVGNFHVL 720

Query: 355 AISEGKILTWGWG 367
           A++E + L +GWG
Sbjct: 721 ALTEDQ-LVYGWG 732



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 114/254 (44%), Gaps = 27/254 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  A    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 521 WGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGR 580

Query: 103 L--GISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           L  G S+N+   L P  ++ L   +   V   +G   +  +T  G ++ WG  + G+LG 
Sbjct: 581 LGHGNSDNV---LIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGR 637

Query: 158 ----GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G K  K+      V+ L  I   +   G + S A+T  G+V +WG G   RLGHG 
Sbjct: 638 GGCDGSKTPKI------VDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGN 691

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           E  I           P++I+ L+  KVK    G  H   + E+  VY +G     ++   
Sbjct: 692 EEHI---------RYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQIDPA 742

Query: 274 EGNHARRPSLISKL 287
            G     P+L   L
Sbjct: 743 LGTIVPEPTLCPTL 756



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG                P+L++ L    +   A G  +
Sbjct: 510 LALTQDSSVYSWGNGDGGRLGHGDR---------VWYDEPKLVEALVDKNITFIACGSTY 560

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 561 SAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTA 620

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +++WG    G LG G  D   +P ++     +  V +V CG + +AA++  G++ TW
Sbjct: 621 SGIVFSWGDGNYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTW 679

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G             G +LGHGN+    +P ++   +  K  ++  G  H  AL E
Sbjct: 680 GKG------------EGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTE 724



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 627 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYR 686

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E+I Y   P  I  LK K+V ++  G  H  A+T D  +Y WG+N  GQ  +  
Sbjct: 687 LGHGNEEHIRY---PKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWGRNDYGQ--IDP 741

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
               ++P PT    LSG      A G  QS A
Sbjct: 742 ALGTIVPEPTLCPTLSGKNIIGLACGLTQSFA 773



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 20/152 (13%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   + P L   L     V + GG  T + +T+ G++Y  G    G LGIG  D +  P
Sbjct: 4276 EGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGTDSVMVP 4335

Query: 332  ---ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
               E +Q  F +     V+ G KH  A+S EG + +WG G              G+LGHG
Sbjct: 4336 TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHG 4381

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            N + Y  P ++      + + ++CG +H+ A+
Sbjct: 4382 NRLMYDRPKLIEELLGTEIVDIACGGHHSAAI 4413



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG  ++ VL+S GELYTWG    G LG G+ D +  P  V    +   V  V+CG   
Sbjct: 554 IACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTA-LNGHMVVYVACGSGD 612

Query: 353 TAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           +  +   + G + +WG G              G+LG G       P IV+   ++   +V
Sbjct: 613 SQTLCVTASGIVFSWGDGNY------------GKLGRGGCDGSKTPKIVDKLLDINVAKV 660

Query: 410 SCGFNHTGALLEY 422
            CG   + AL  Y
Sbjct: 661 YCGGQFSAALTAY 673


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 48/371 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 355 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 413

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 414 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 471

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 472 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 522

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 523 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 580

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG
Sbjct: 581 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCG 639

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   
Sbjct: 640 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQVRT 687

Query: 409 VSCGFNHTGAL 419
           V CG N T A+
Sbjct: 688 VVCGINFTAAI 698



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 380 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 439

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 440 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 498

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 499 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 556

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 557 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 607

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 608 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 667

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D   SP  V+    +  V  V CG   TAAI
Sbjct: 668 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 698



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 407 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 465

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 466 SAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVPREVESLK 513

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 514 GLRTVRAACGVWHTAAVVEVM 534


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 187/370 (50%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++A+ACG  H   +T+ G V++ G    G+LG  +  ++ +   P  + GLK   V+ ++
Sbjct: 307 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY+WG N+   G LG G +A + +P   K++  L GI     + G 
Sbjct: 364 CGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP--RKLDGPLEGIHVSSVSCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 422 WHTAVVTSAGQLFTFGDGTFGVLGHGDRISV---------SIPREVESLKGLRTMRAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 473 VWHTAAVVEIMVGSSNSSNCSSGKLFTWGDG--DKCRLGHGDKEARLVPTCVATLVEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  LT+ G++YT GS   G LG    D +  P RV+G   ++ V++++CG 
Sbjct: 531 CQVACGHSLTAALTTTGQVYTMGSPVYGQLGNPQADGML-PTRVEGKLMKNFVEELACGA 589

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G+LGHG+  D   P++V   ++ +   +
Sbjct: 590 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDADDRNSPSVVEALKDKQVKGI 637

Query: 410 SCGFNHTGAL 419
            CG + T A+
Sbjct: 638 VCGTSFTAAI 647



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 151/333 (45%), Gaps = 33/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           WG    GRLG G       P      +  +++ +ACG  H+  +T +G +Y  G N  +F
Sbjct: 329 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNF 388

Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G LG  SE   +   P ++ G  +   V  +S G  H++ +T  G+L+ +G  + G LG 
Sbjct: 389 GLLGCGSEATQWV--PRKLDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 446

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
           G + +  + IP +VE L G+ T +AA G   + AV               GK+ +WG G 
Sbjct: 447 GDRIS--VSIPREVESLKGLRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGD 504

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +A +   G+VY  G  
Sbjct: 505 KCRLGHGDKEARL---------VPTCVATLVEPNFCQVACGHSLTAALTTTGQVYTMGSP 555

Query: 266 AVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G
Sbjct: 556 VYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHG 615

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             D  +SP  V+    +  V  + CG   TAAI
Sbjct: 616 DADDRNSPSVVEA-LKDKQVKGIVCGTSFTAAI 647



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 42/272 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 295 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 345

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
             P+ +  L+   V++ A G  HS  +  +G +YI+G  A +  L   G+ A +  +  K
Sbjct: 346 SHPKFVDGLKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQ-WVPRK 404

Query: 287 LP------YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           L       +   V CG +HT V+TS G+L+T+G    G LG G    +  P  V+     
Sbjct: 405 LDGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVES-LKG 463

Query: 341 SPVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
               + +CG  HTAA+ E             GK+ TWG          DG     +LGHG
Sbjct: 464 LRTMRAACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWG----------DGDKC--RLGHG 511

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +    + PT V         QV+CG + T AL
Sbjct: 512 DKEARLVPTCVATLVEPNFCQVACGHSLTAAL 543



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 17/202 (8%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P  +  
Sbjct: 294 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 353

Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
           L     E V CG YH+C +T  G+LY WG N    G LG GS      P ++ GP     
Sbjct: 354 LKNFNVELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIH 413

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  VSCG  HTA + S G++ T+G     GTF        G LGHG+ +    P  V   
Sbjct: 414 VSSVSCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRISVSIPREVESL 461

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
           + ++ ++ +CG  HT A++E +
Sbjct: 462 KGLRTMRAACGVWHTAAVVEIM 483


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G VY+ G    G+LG   +     +P  I  L    ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLIDALAHMNIELVACG 371

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVE-CLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG N     GL     +V   +P ++   L GI     + G   +
Sbjct: 372 EYHTCAVTLSGDLYTWG-NGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSI---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKETRLVPTCVASLVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS+  G LG    D +  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G  G    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLSGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRQS--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKETRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  +SP  V+    +  V  V CG   TAAI
Sbjct: 623 TDDRNSPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 130/304 (42%), Gaps = 48/304 (15%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++++WG+ +        N +LG    A     +P  +E    +  +  + G   +  VT
Sbjct: 268 GDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNISCGGRHATLVT 327

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG    GRLGHG +  +           P+LI  L  + +++ A G  H+  +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLIDALAHMNIELVACGEYHTCAV 378

Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G+   +  L   GN   H     L   L   +   + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    +  P  V+       V + +CG  HTAA+ E          
Sbjct: 439 LFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSSSN 497

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GKI TWG G              G+LGHG+    + PT V         QV+CG   
Sbjct: 498 CSSGKIFTWGDGDK------------GRLGHGDKETRLVPTCVASLVEPNFCQVACGHCF 545

Query: 416 TGAL 419
           T AL
Sbjct: 546 TVAL 549



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 23/203 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G VY +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG----SIDVLH-SPERVQGPFSES 341
           +   E V CG YHTC +T  G+LYTWG   NG    G      +V H  P+R+ GP    
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLSGHGNEVSHWMPKRLNGPLEGI 418

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  +SCG  HTA + S G++ T+G G            S G LGHG+      P  V  
Sbjct: 419 HVSSISCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRQSISVPREVES 466

Query: 401 GENVKALQVSCGFNHTGALLEYV 423
            + ++ ++ +CG  HT A++E +
Sbjct: 467 LKGLRTVRAACGVWHTAAVVEVM 489


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 169/356 (47%), Gaps = 41/356 (11%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG+G+ E S + P  C  F+   LK +ACG  H+LFL   G VY  G N  G
Sbjct: 5   WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64

Query: 102 QLG------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           QLG        E +G +L+  +ISG       +S G  HS A+   G+++ WG    GQL
Sbjct: 65  QLGHDKGGSRPELVG-ALDAQKISG-------VSCGQAHSLAVNEQGQVFAWGAGDGGQL 116

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
           GLG  A + + +P  ++ L      Q   G    +A++  G++  WG   SG+LG G+ E
Sbjct: 117 GLG-TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGE 175

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S L         +P+ +K L G+ +   +AG  HS  +  +G V+ +G  +  ++   +
Sbjct: 176 PSTL---------SPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLND 226

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 P  I K   S++VV   CG  HT  LT  G L+T+G+   G LG  S      P
Sbjct: 227 EQDRAVPCHI-KFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLP 285

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
            RV      + V Q++CG  HT A      L + +G           ++ GQLG G
Sbjct: 286 RRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYAFGC----------NTQGQLGTG 330



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 149/329 (45%), Gaps = 38/329 (11%)

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLGI  +     EP        + + +++ G  HS  +  DG +Y  G NS GQLG  K
Sbjct: 11  GQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDK 70

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++    P  V  L        + G   S+AV   G+V +WGAG  G+LG G     + 
Sbjct: 71  GGSR----PELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAV- 125

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    PRLIK+L   ++     G  H   + ++G+++++G+ +  ++   +G    
Sbjct: 126 -------RVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKG---- 174

Query: 280 RPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            PS +S  P          ++  GG H+  L+  G ++ WG N  G LG+        P 
Sbjct: 175 EPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPC 234

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            ++   S+  V  +SCG +HTAA++ EG + T+G G            S GQLGH +  +
Sbjct: 235 HIKFLRSQKVV-YISCGEEHTAALTKEGGLFTFGNG------------SKGQLGHDSTRN 281

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGALL 420
              P  V      +  Q++CG NHT A +
Sbjct: 282 EPLPRRVMELMGTEVSQIACGRNHTLAFV 310



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 30/278 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG +  GQLG+G   A V   P       G   K+ A G + S+ +   G V + G+   
Sbjct: 5   WGSSGAGQLGIGASEASVFE-PRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSC 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +  S            P L+  L+  K+   + G  HS  ++E G+V+ +G   
Sbjct: 64  GQLGHDKGGS-----------RPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGD 112

Query: 267 VDKMLFQEGNHARR-PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++       A R P LI KL      +V+CG +H   L+  G+L+ WG N +G LG+G
Sbjct: 113 GGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLG 172

Query: 324 SIDV-LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             +    SP+ ++      P+ Q+S G  H+ A+S  G +  WG             +S 
Sbjct: 173 KGEPSTLSPQPLKS-LCGIPLTQISAGGDHSFALSFSGAVFGWG------------KNSA 219

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLG  ++ D   P  + F  + K + +SCG  HT AL
Sbjct: 220 GQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAAL 257



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)

Query: 42  LWGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG    G+LGLG  E S   P    +     L  ++ GG H+  L+ +G V+  G N  
Sbjct: 160 VWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSA 219

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+++    ++ P  I  L+ ++VV IS G  H++A+T +G L+ +G  S GQ  LG 
Sbjct: 220 GQLGLNDEQDRAV-PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ--LGH 276

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHG 212
            + +  P+P +V  L G    Q A G   ++A V   G + ++G    G+LG G
Sbjct: 277 DSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 6/143 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+ G ++  G    GQ
Sbjct: 214 WGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQ 273

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P R+  L   EV QI+ G +H+ A +   G +Y +G N+ GQLG G +
Sbjct: 274 LGHDSTRNEPL-PRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIR 332

Query: 161 AAKVIPIPT---KVECLSGIFTK 180
            +   P+P    +  C+   +T+
Sbjct: 333 GSAKSPVPVSNIQPLCIGNAYTR 355


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 155/323 (47%), Gaps = 23/323 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL--TETGCVYATGLNDF 100
           WG+G  G LG G       P V  A   +++K LAC G HT+F    E G VY+ GL  +
Sbjct: 4   WGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLAC-GLHTVFALNAEDGKVYSWGLGKY 62

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV---DGELYMWGKNSNGQLG 156
           G LG   N+     PL+I+  K   V+ IS    H++A+T     G +Y +G NSN QLG
Sbjct: 63  GILG-QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLG 121

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +G    +    P  V  L+     + A G   S A++  G +  WG G  G+LG      
Sbjct: 122 VGD--TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLG------ 173

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            LG    ++E T   I E +  KV   A G LH+  +   G VY FG     ++     N
Sbjct: 174 -LGNYNLSTEPTILHIGE-KKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMN 231

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    S+  V   CG +H+  +T  G+LY WG   +G LG+G      SP  
Sbjct: 232 KFHLPYRIS-FNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTE 290

Query: 334 VQGPFSESPVDQVSCGWKHTAAI 356
           V+G F +  + +++CG KHTAA+
Sbjct: 291 VEG-FRDKKIGRIACGSKHTAAL 312



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 148/336 (44%), Gaps = 30/336 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKN 150
           VY  G    G LG  E+I      +  + L   + +++ G H   A+   DG++Y WG  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             G LG G   ++  P+       S +       L      +VT  G V S+G   + +L
Sbjct: 61  KYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQL 120

Query: 210 GHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           G G           T  Y  P+L+  L    +   A G  HSA +   G ++++G     
Sbjct: 121 GVGD----------TEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDG 170

Query: 269 KMLFQEGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           ++     N +  P+++    K     +V CG  HTC+LT GG +Y +GSN  G +   S+
Sbjct: 171 QLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSM 230

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
           +  H P R+    S+  V  VSCG  H+AAI+E GK+  WG              + G+L
Sbjct: 231 NKFHLPYRISFNTSKRFV-SVSCGSFHSAAITENGKLYAWGL------------ETDGRL 277

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           G G+      PT V    + K  +++CG  HT AL+
Sbjct: 278 GLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAALI 313



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 126/284 (44%), Gaps = 28/284 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWG 202
           +Y WG   NG LG G+     IP P  VE L     K+ A G     A+    GKV SWG
Sbjct: 1   VYTWGSGINGALGHGEDID--IPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWG 58

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID---ENGRV 259
            G  G LG G        LRS   + P  I   +   V   +   LH+A +      G V
Sbjct: 59  LGKYGILGQGN-------LRS--RFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           Y FGD +  ++   +      P L++ L      +V CG YH+  L++ G L+ WG  ++
Sbjct: 110 YSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDD 169

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           G LG+G+ ++   P  +     ++ V  V+CG  HT       ILT G     G     G
Sbjct: 170 GQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC------ILTVG-----GLVYAFG 218

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +  GQ+   +   +  P  ++F  + + + VSCG  H+ A+ E
Sbjct: 219 SNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE 262



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 88/169 (52%), Gaps = 6/169 (3%)

Query: 27  CKRWISSTLQRR-FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTL 84
           C ++ S+ L  +    LWG GD G+LGLG+      P +    EK + +  +ACG  HT 
Sbjct: 147 CGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTC 206

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE 143
            LT  G VYA G N +GQ+       + L P RIS    K  V +S G  HS+AIT +G+
Sbjct: 207 ILTVGGLVYAFGSNIYGQIAAPSMNKFHL-PYRISFNTSKRFVSVSCGSFHSAAITENGK 265

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           LY WG  ++G+LGLG    K    PT+VE        + A G + + A+
Sbjct: 266 LYAWGLETDGRLGLGD--CKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 48/371 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 309 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 367

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 425

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 426 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 476

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 477 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 534

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCG 593

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   
Sbjct: 594 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVEALKDKQVRT 641

Query: 409 VSCGFNHTGAL 419
           V CG N T A+
Sbjct: 642 VVCGINFTAAI 652



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 334 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 511 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 561

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 562 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 621

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D   SP  V+    +  V  V CG   TAAI
Sbjct: 622 TDDRSSPTLVEA-LKDKQVRTVVCGINFTAAI 652



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 361 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 419

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 420 SAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVPREVESLK 467

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 468 GLRTVRAACGVWHTAAVVEVM 488


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 32/333 (9%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           S+K +ACGG H++FL E G VY  GLN  GQLG  E  G   +P +I  L  + ++ ++ 
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLG-HEREGN--KPEQIGALADQHIIHVAC 92

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  HS A++  G+L+ WG  S+GQLG        + IP  ++ L+     Q + G    +
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+   G+  +WG    G+LG G+E          S+ +P+ +K LEG+ +   AAG  HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKEFP--------SQASPQRVKSLEGIPLAQVAAGGAHS 203

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
             +  +G V+ +G     ++   +    + P  + KL  +++VV   CG  HT VLT  G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
            ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A   S G I  +G
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            G              GQLG G+  +   P+ V
Sbjct: 322 CGAR------------GQLGTGHTCNVKCPSPV 342



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG +        P  I  
Sbjct: 75  KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+ + WG+N +GQLGLGK+       P +V+ L GI  
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E         T   +P  +K L   K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 151/324 (46%), Gaps = 33/324 (10%)

Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG  ++ 
Sbjct: 14  GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNTKGQLGHEREG 73

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K    P ++  L+       A G   S+A++  G++ SWGAG  G+LGH          
Sbjct: 74  NK----PEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
              S   PRLIK+L    +   + G  H   +  +G+ + +G     ++     F     
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP  V+  
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLL 240

Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
            ++  V  +SCG +HTA +++ G + T+G G            S GQLGH +  D ++P 
Sbjct: 241 RTQKVV-YISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSMNDEVNPR 287

Query: 397 IVNFGENVKALQVSCGFNHTGALL 420
            V      +  Q++CG  HT A +
Sbjct: 288 RVLELMGSEVTQIACGRQHTLAFV 311



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 30/279 (10%)

Query: 147 WGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           WG  S G  G +      ++  P     +S    K+ A G   S+ +   G+V + G   
Sbjct: 4   WGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGLNT 63

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +G  
Sbjct: 64  KGQLGHEREGN-----------KPEQIGALADQHIIHVACGESHSLALSDQGQLFSWGAG 112

Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           +  ++      +    P LI KL      +V CG +H   L + G+ +TWG N +G LG+
Sbjct: 113 SDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGL 172

Query: 323 G-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
           G       SP+RV+      P+ QV+ G  H+ A+S  G +  WG             ++
Sbjct: 173 GKEFPSQASPQRVKS-LEGIPLAQVAAGGAHSFALSLSGAVFGWG------------RNN 219

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 220 AGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVL 258



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL     R  P          +  ++CG  HT  LT++G V+  G   FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 334 CNVKCPSPVK 343


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  132 bits (332), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 103/360 (28%), Positives = 174/360 (48%), Gaps = 28/360 (7%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
            +   +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYMWG NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
           T ++T  G LYT+G   +G LG+G  +  +  +    P F +  V  V+CG  H   +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367



 Score =  124 bits (312), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 106/350 (30%), Positives = 160/350 (45%), Gaps = 39/350 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  LK E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALKSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +     T    L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMWGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+        NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
             E+Y++G  + G LG G+        RV   F +  V   +CG  HTA I++  +L   
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
             G HG            LG  N  +   PT+     +     V+CG  H
Sbjct: 321 GDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 44/262 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P ++ C           G E +  VT  GK+  +G+   G+LG G ++++         
Sbjct: 37  VPLRISC-----------GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV--------- 76

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-- 284
             P  +K L+  +VK+ A G  H+      G +Y  G     ++   + N      L+  
Sbjct: 77  NKPTCVKALKSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF 136

Query: 285 -SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            +K    + +  G   +  LT  G LY WG N  G +G+G      +P+ V        V
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMWGDNSEGQIGLGKESNALTPQEVS---VGKRV 193

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVN 399
             VSCG+ H+A ++ +G + T+G                G+LG   +    H     + +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQVTD 241

Query: 400 FGENVKALQVSCGFNHTGALLE 421
             + V  +QV+CG  HT AL E
Sbjct: 242 IPDRV--VQVACGGGHTVALTE 261


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 173/378 (45%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV  S      + AL+   ++TL L   G V+A G N +GQ
Sbjct: 220 WGSNFSGQLGDGTATPRLSPVQVSGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQ 277

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL   VV +S GY HS A+  DG ++ WG N NGQLG G    
Sbjct: 278 LGDGTTT-PRLSPVQVPGLTN-VVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ 335

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP  V  L  +    A  G+  S+A+   G V +WG    G+LG G          
Sbjct: 336 RSPSIP--VFGLIDVVALSA--GYSHSLALRTDGTVWAWGYNSLGQLGDG---------- 381

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P  ++  +   V   +AG  HS  +  +G V  +G     ++      H   P 
Sbjct: 382 -TTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG HT  L + G ++ WGSN +G LG G+     SP ++ G    + 
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLG---LTN 497

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  +S G+ H+ A+ ++G +  W WG           +S GQLG G     + P  V   
Sbjct: 498 VVALSAGYYHSLAVHTDGTV--WAWG----------SNSDGQLGDGTTTHRLTPVQVPGL 545

Query: 402 ENVKALQVSCGFNHTGAL 419
            +V AL  S G +H+ AL
Sbjct: 546 TDVVAL--SAGDSHSLAL 561



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 173/350 (49%), Gaps = 45/350 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G +H+L L   G V+A G N  GQLG          P+++ GL  +VV +S G HH 
Sbjct: 1   MAAGYSHSLALHTDGTVWAWGSNSSGQLGDGTTTPRG-SPVQVPGLT-DVVALSAGNHHC 58

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    ++  +  +V  L+ +    A  G   ++A+   
Sbjct: 59  LALRTDGTVWAWGSNSSGQLGDGTTTPRLSSV--QVPGLTDVVALSA--GSSYTLALRTD 114

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACI 253
           G V +WG    G+LG G               TPRL   ++ G+   +A ++G  HS  +
Sbjct: 115 GTVWAWGYNFYGQLGDGTT-------------TPRLAPVQVPGLTDVVALSSGIYHSLAL 161

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
             +G V+ +GD A  ++   +G   RR S + ++P   +VV    GGYH+  + + G ++
Sbjct: 162 RTDGTVWAWGDNASGQL--GDGTATRRLSPV-QVPGLTDVVALSAGGYHSLAVRTDGTVW 218

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
            WGSN +G LG G+     SP +V G    + V  +S    +T A+ ++G +  W W   
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSG---LTNVVALSADDSYTLALRTDGTV--WAW--- 270

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  G++S GQLG G     + P  V    NV AL  S G++H+ AL
Sbjct: 271 -------GYNSYGQLGDGTTTPRLSPVQVPGLTNVVAL--SAGYSHSLAL 311



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 179/380 (47%), Gaps = 41/380 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + AL+ GG H+L +   G V+A G N  GQ
Sbjct: 170 WGDNASGQLGDGTATRRLSPVQVPGLTD--VVALSAGGYHSLAVRTDGTVWAWGSNFSGQ 227

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++SGL   VV +S    ++ A+  DG ++ WG NS GQLG G    
Sbjct: 228 LGDGTAT-PRLSPVQVSGLTN-VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTP 285

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    A  G+  S+A+   G V +WG   +G+LG+G  +      R
Sbjct: 286 RLSPV--QVPGLTNVVALSA--GYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ-----R 336

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S S      I     + V   +AG+ HS  +  +G V+ +G  ++ ++   +G    RPS
Sbjct: 337 SPS------IPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQL--GDGTTIPRPS 388

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++P   +VV    G  H+  L + G +  WG N +G LG G+     SP +V     
Sbjct: 389 PV-QVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVP---D 444

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            + V  +S G  HT A+     + W WG           +S GQLG G     + P  + 
Sbjct: 445 LTDVVALSAGGNHTLALRTNGTV-WAWG----------SNSDGQLGDGTTTPRLSPVQML 493

Query: 400 FGENVKALQVSCGFNHTGAL 419
              NV AL  S G+ H+ A+
Sbjct: 494 GLTNVVAL--SAGYYHSLAV 511



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 185/383 (48%), Gaps = 47/383 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R   V         + AL+ G ++TL L   G V+A G N +GQ
Sbjct: 70  WGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVALSAGSSYTLALRTDGTVWAWGYNFYGQ 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++ GL  +VV +S+G +HS A+  DG ++ WG N++GQLG G    
Sbjct: 128 LGDGTTT-PRLAPVQVPGLT-DVVALSSGIYHSLALRTDGTVWAWGDNASGQLGDGTATR 185

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    A  G   S+AV   G V +WG+  SG+LG G          
Sbjct: 186 RLSPV--QVPGLTDVVALSA--GGYHSLAVRTDGTVWAWGSNFSGQLGDGTA-------- 233

Query: 223 STSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                TPRL   ++ G+   +A +A   ++  +  +G V+ +G  +  ++   +G    R
Sbjct: 234 -----TPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL--GDGTTTPR 286

Query: 281 PSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            S + ++P    VV    GY H+  L + G ++ WG N NG LG G I    SP      
Sbjct: 287 LSPV-QVPGLTNVVALSAGYSHSLALRTDGTVWAWGYNYNGQLGNG-IPTQRSPSIPV-- 342

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
           F    V  +S G+ H+ A+ ++G +  W W          G++S GQLG G  +    P+
Sbjct: 343 FGLIDVVALSAGYSHSLALRTDGTV--WAW----------GYNSLGQLGDGTTIP--RPS 388

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
            V   +    + +S G +H+ AL
Sbjct: 389 PVQVPDLTDVVALSAGDSHSLAL 411



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 173/398 (43%), Gaps = 65/398 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  PV         + AL+ G +H+L L   G V+A G N  GQ
Sbjct: 270 WGYNSYGQLGDGTTTPRLSPVQVPGLTN--VVALSAGYSHSLALRTDGTVWAWGYNYNGQ 327

Query: 103 LGISENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I     P + + GL  +VV +S GY HS A+  DG ++ WG NS GQLG G   
Sbjct: 328 LG--NGIPTQRSPSIPVFGLI-DVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTI 384

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P P +V  L+ +    A  G   S+A+   G V +WG   SG+LG G  +  L  +
Sbjct: 385 PR--PSPVQVPDLTDVVALSA--GDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPV 440

Query: 222 R------------------------------STSE-------YTPRL--IKELEGVKVKI 242
           +                              S S+        TPRL  ++ L    V  
Sbjct: 441 QVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTPRLSPVQMLGLTNVVA 500

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            +AG+ HS  +  +G V+ +G  +  ++      H   P  +  L     +  G  H+  
Sbjct: 501 LSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTDVVALSAGDSHSLA 560

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
           L + G ++ WGSN +  LG G+     SP +V G    + V  +S G  H+ A+ ++G +
Sbjct: 561 LRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPG---LTDVVALSAGGAHSLALRTDGTV 617

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             W WG ++           GQLG G     + P +V+
Sbjct: 618 --WAWGSNY----------YGQLGDGTTTPRLFPVLVS 643



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 167/359 (46%), Gaps = 39/359 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV         + AL+ G +H+L L   G V A G+N  GQ
Sbjct: 370 WGYNSLGQLGDGTTIPRPSPVQVPDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQ 427

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P+++  L  +VV +S G +H+ A+  +G ++ WG NS+GQLG G    
Sbjct: 428 LGDGTTT-HRLSPVQVPDL-TDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTTTP 485

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  ++  L+ +    A  G+  S+AV   G V +WG+   G+LG G          
Sbjct: 486 RLSPV--QMLGLTNVVALSA--GYYHSLAVHTDGTVWAWGSNSDGQLGDGT--------- 532

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   TP  +  L    V   +AG  HS  +  +G V+ +G  +  ++   +G    R S
Sbjct: 533 TTHRLTPVQVPGL--TDVVALSAGDSHSLALRTDGTVWAWGSNSSSQL--GDGTTTPRGS 588

Query: 283 LISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + ++P   +VV    GG H+  L + G ++ WGSN  G LG G+      P  V     
Sbjct: 589 PV-QVPGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLTG 647

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            S    +  G  H+ A+            + GT    G++ GGQLG G    ++HP  V
Sbjct: 648 TS---NLYAGAGHSLALR-----------TDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 109/378 (28%), Positives = 174/378 (46%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV         + AL+ G  H L L   G V+A G N  GQ
Sbjct: 20  WGSNSSGQLGDGTTTPRGSPVQVPGLTD--VVALSAGNHHCLALRTDGTVWAWGSNSSGQ 77

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L  +++ GL  +VV +S G  ++ A+  DG ++ WG N  GQLG G    
Sbjct: 78  LGDGTTT-PRLSSVQVPGL-TDVVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTP 135

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +    +  G   S+A+   G V +WG   SG+LG G          
Sbjct: 136 RLAPV--QVPGLTDVVALSS--GIYHSLALRTDGTVWAWGDNASGQLGDGT--------- 182

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   +P  +  L  V V ++A G+ HS  +  +G V+ +G     ++          P 
Sbjct: 183 ATRRLSPVQVPGLTDV-VALSAGGY-HSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPV 240

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +     +T  L + G ++ WG N  G LG G+     SP +V G    + 
Sbjct: 241 QVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPG---LTN 297

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  +S G+ H+ A+ ++G +  W W          G++  GQLG+G       P+I  FG
Sbjct: 298 VVALSAGYSHSLALRTDGTV--WAW----------GYNYNGQLGNGIPTQR-SPSIPVFG 344

Query: 402 ENVKALQVSCGFNHTGAL 419
             +  + +S G++H+ AL
Sbjct: 345 L-IDVVALSAGYSHSLAL 361


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G ++  G    G+LG  +  ++   L+P  +  L    ++ +S
Sbjct: 310 VQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDV---LQPKLVDALGNTNIELVS 366

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  IP   K+   L GI     A G 
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIP--KKINGPLEGIHVSSIACGP 424

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 425 WHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVT---------MPREVESLKGLRTVRAACG 475

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 476 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKETKLVPTCVAALVDPNF 533

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++++CG 
Sbjct: 534 CRVSCGHSMTVALTTSGHVYTMGSPVYGQLGNPHADG-KVPVRVEGKLSKSFVEEIACGA 592

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   +
Sbjct: 593 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVKSI 640

Query: 410 SCGFNHTGAL 419
           +CG N T A+
Sbjct: 641 ACGTNFTAAI 650



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 155/340 (45%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ ++CG  HT  +T +G +Y    G  +F
Sbjct: 332 WGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNF 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P +I+G  +   V  I+ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGNEVSHWI-PKKINGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRGS--VTMPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        + G   +  +  +G VY  G   
Sbjct: 509 GRLGHGDKETKL---------VPTCVAALVDPNFCRVSCGHSMTVALTTSGHVYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  D  +SP  V+    +  V  ++CG   TAAI
Sbjct: 612 NGRLGHGDTDDRNSPTLVEA-LKDKQVKSIACGTNFTAAI 650



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G   +  VT  G++ +WG    GRLGHG +S +L        
Sbjct: 298 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVL-------- 349

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+L+  L    +++ + G  H+  +  +G +Y +GD   +  L   GN      P  I
Sbjct: 350 -QPKLVDALGNTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKI 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  V+      
Sbjct: 409 NGPLEGIHVSSIACGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLR 468

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 469 TV-RAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGD 515

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V    +    +VSCG + T AL
Sbjct: 516 KETKLVPTCVAALVDPNFCRVSCGHSMTVAL 546



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 104/201 (51%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +   +P L+  L 
Sbjct: 299 PKALESAVVLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALG 358

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+++ GP     V
Sbjct: 359 NTNIELVSCGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWIPKKINGPLEGIHV 417

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++CG  HTA + S G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 418 SSIACGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRGSVTMPREVESLK 465

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 466 GLRTVRAACGVWHTAAVVEVM 486


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 181/371 (48%), Gaps = 48/371 (12%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-I 128
           K  ++ ++CGG H   +T+ G +Y+ G    G+LG   +     +P  I  L    ++ +
Sbjct: 354 KLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVP-QPKLIDALANMNIELV 412

Query: 129 STGYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALG 185
           + G +H+ A+T+ G+LY WG   +++G LG G + +  +P   +V   L GI     + G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVP--KRVNGPLEGIHVSAISCG 470

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA 
Sbjct: 471 PWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAAC 521

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P 
Sbjct: 522 GVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVAALVEPN 579

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             ++ CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG
Sbjct: 580 FCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGML-PVRVEGKLHKNFVEEISCG 638

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   
Sbjct: 639 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRSSPTLVESLKDKQVRT 686

Query: 409 VSCGFNHTGAL 419
           V CG N T A+
Sbjct: 687 VVCGINFTAAI 697



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G ++ 
Sbjct: 379 WGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNS 438

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 439 GLLGHGNEVSHWV-PKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG 497

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 498 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 555

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 556 GRLGHGDKDTRL---------VPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPV 606

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 607 YGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 666

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D   SP  V+    +  V  V CG   TAAI
Sbjct: 667 TDDRSSPTLVES-LKDKQVRTVVCGINFTAAI 697



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+  + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  ++ +G LG G+ +V H  P+RV GP     V
Sbjct: 406 NMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGN-EVSHWVPKRVNGPLEGIHV 464

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 465 SAISCGPWHTAIVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVPREVESLK 512

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 513 GLRTVRAACGVWHTAAVVEVM 533


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 177/367 (48%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G VY+ G    G+LG   +     +P  +  L    ++ ++ G
Sbjct: 313 VQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVP-QPKLVEALAHMNIELVACG 371

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G + +  +P       L GI     + G   +
Sbjct: 372 EYHTCAVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGP-LEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G  H
Sbjct: 431 AVVTSAGQLFTFGDGSFGVLGHGDRQSL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSTSNCSSGKIFTWGDG--DKGRLGHGDKDTRLVPTCVASLVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS+  G LG    D +  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCFTVALTTSGHVYTMGSSVYGQLGNPQADGM-VPARVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 335 WGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTCAVTLSGDLYTWGNGTFNF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNEVSHWM-PKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRQS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDTRL---------VPTCVASLVEPNFCQVACGHCFTVALTTSGHVYTMGSSV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  +SP  V+    +  V  V CG   TAAI
Sbjct: 623 TDDRNSPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 130/304 (42%), Gaps = 48/304 (15%)

Query: 142 GELYMWGKNS--------NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+ +        N + G    A     +P  +E    +  +  + G   +  VT
Sbjct: 268 GDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNISCGGRHATLVT 327

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG    GRLGHG +  +           P+L++ L  + +++ A G  H+  +
Sbjct: 328 KQGEVYSWGEESGGRLGHGVDCDVP---------QPKLVEALAHMNIELVACGEYHTCAV 378

Query: 254 DENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGE 308
             +G +Y +G+   +  L   GN   H     L   L   +   + CG +HT V+TS G+
Sbjct: 379 TLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQ 438

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    L  P  V+       V + +CG  HTAA+ E          
Sbjct: 439 LFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSTSN 497

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GKI TWG G              G+LGHG+    + PT V         QV+CG   
Sbjct: 498 CSSGKIFTWGDGDK------------GRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCF 545

Query: 416 TGAL 419
           T AL
Sbjct: 546 TVAL 549



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 26/204 (12%)

Query: 231 LIKELE---GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           L K LE    + V+  + G  H+  + + G VY +G+ +  ++         +P L+  L
Sbjct: 301 LPKPLEFAGRLDVQNISCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEAL 360

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI----DVLH-SPERVQGPFSE 340
            +   E V CG YHTC +T  G+LYTWG   NG    G +    +V H  P+R+ GP   
Sbjct: 361 AHMNIELVACGEYHTCAVTLSGDLYTWG---NGTFNFGLLGHGNEVSHWMPKRLNGPLEG 417

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             V  +SCG  HTA + S G++ T+G G            S G LGHG+      P  V 
Sbjct: 418 IHVSSISCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRQSLSVPREVE 465

Query: 400 FGENVKALQVSCGFNHTGALLEYV 423
             + ++ ++ +CG  HT A++E +
Sbjct: 466 SLKGLRTVRAACGVWHTAAVVEVM 489


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 167/348 (47%), Gaps = 32/348 (9%)

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           E    P  C  F   +++ + CG  HT+F+ + G VY  G ND GQLG  ++     +P 
Sbjct: 4   EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKS---RKKPD 60

Query: 117 RISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           ++  L  + +V +S G  H+ A+   G+++ WG  ++GQ+GL   A   I +P  ++ L 
Sbjct: 61  QVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLS-VAEDYIRVPRNIKSLY 119

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
            I   Q A G   S+A++    + SWG    G+LG G E           E  PR IK L
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK--------KESAPRHIKSL 171

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
            G+     AAG  HS  +  +G ++ +G     ++   +      P+L+  L  S++++ 
Sbjct: 172 AGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSL-RSQKIIH 230

Query: 295 --CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
             CG  HT  LT  G ++T+G+   G LG  S +   +P +V      S V Q++CG +H
Sbjct: 231 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV-FELMGSIVTQIACGRQH 289

Query: 353 TAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           T A   S G+I ++G GG+            GQLG G+  +   P  V
Sbjct: 290 TLAFVPSSGRIYSFGLGGN------------GQLGTGSTSNRKSPFTV 325



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 145/297 (48%), Gaps = 16/297 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G V++ G    GQ+
Sbjct: 43  GCNDLGQLGHD--KSRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQI 100

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+S    Y   P  I  L   ++VQ++ G+HHS A++ + ++Y WG+N  GQLGLG +  
Sbjct: 101 GLSVAEDYIRVPRNIKSLYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIK 160

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K    P  ++ L+GI     A G   S A+T  G +  WG    G+LG   E        
Sbjct: 161 KE-SAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDE-------- 211

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P L+K L   K+     G  H+A + + G V+ FG     ++     NH   P 
Sbjct: 212 -TDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPR 270

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + +L  S   ++ CG  HT     S G +Y++G   NG LG GS     SP  V+G
Sbjct: 271 KVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 327



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLGS ++    P    +        +A GG H+  LT +G ++  G N FG
Sbjct: 145 WGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFG 204

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++    S   L  S   ++++ I  G  H++A+T +G ++ +G    GQLG     
Sbjct: 205 QLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 264

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            +V   P KV  L G    Q A G + ++A V   G++ S+G GG+G+LG G  S+
Sbjct: 265 HEV--NPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSN 318



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 113/262 (43%), Gaps = 29/262 (11%)

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +V+  P + +       +    G   +V V   G V + G    G+LGH +         
Sbjct: 4   EVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDK--------- 54

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
             S   P  +  L+   +   + G  H+  +++ G+V+ +G  A  ++ L    ++ R P
Sbjct: 55  --SRKKPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVP 112

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             I  L Y  ++V   CG +H+  L+   ++Y+WG N+ G LG+GS     S  R     
Sbjct: 113 RNIKSL-YDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSL 171

Query: 339 SESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
           +  P   ++ G  H+ A++  G I  WG             +  GQLG  ++ D   P +
Sbjct: 172 AGIPFAHIAAGGGHSFALTMSGAIFGWG------------RNKFGQLGLNDETDRSAPAL 219

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           +    + K + + CG +HT AL
Sbjct: 220 LKSLRSQKIIHICCGEDHTAAL 241


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 184/405 (45%), Gaps = 34/405 (8%)

Query: 26  ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           +C  W +ST ++    +WG  D  +LG         P +C        K +A G   T F
Sbjct: 546 LCTLWENSTNKQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFF 605

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDG 142
           +T  G +Y+ G + FG+LGI +  G    P  ++GL + +   V + +G +H  A+T DG
Sbjct: 606 ITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             + WG   NGQLG G   +     P  +E   G      + G   S A+     + +WG
Sbjct: 666 LAFSWGDGENGQLGHGNLMS--CSKPHLIEAFVGKIVTDISCGSAHSAAIVENKYLYTWG 723

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVY 260
            G  GRLGHG E +IL          P+ +    G  V   + G     + CI ++ +V+
Sbjct: 724 LGDFGRLGHGDEETIL---------QPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVW 774

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +GD    K+          P  + +L   +  +++CG   T  LT  G ++TWG  +  
Sbjct: 775 SWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFY 834

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
            LG G+   +  P+ V+G   +  +D ++ G  H  A++ +G++ +WG         ++ 
Sbjct: 835 RLGHGTDIHVRQPKLVEGLRGKHVID-IAVGALHCLAVTQDGEVFSWG---------DND 884

Query: 378 HSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           H   GQLG G  DV  + P ++    N +   V+CG +H+ A  E
Sbjct: 885 H---GQLGTGETDVKKV-PNLITGLHNHRIKYVACGSSHSIAWTE 925



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 153/324 (47%), Gaps = 20/324 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G+ G+LGLG  E+   P +  + +  ++K ++   GG H L L+  G V++ G  + G
Sbjct: 1500 GYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDG 1559

Query: 102  QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N   S +P RI     K +  I  G  HS+AI ++GELY WGK   G+LG G  
Sbjct: 1560 KLG-HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDS 1618

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P   +VE L   F    A G    Q++ +T    V SWG G  G+LG G      
Sbjct: 1619 DDQLKP--KQVEALQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGG----- 1671

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P +I++L G  +     G   S  + + G +Y +G     ++      H 
Sbjct: 1672 ----SDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHV 1727

Query: 279  RRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP +++ L       + CG  H  V T  GE+Y WG N+ G LG G+I    +P  +  
Sbjct: 1728 RRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTP-TLNT 1786

Query: 337  PFSESPVDQVSCGWKHTAAISEGK 360
                  +D++SCG  HT A S  K
Sbjct: 1787 FLLNKKIDRISCGSAHTIAWSTSK 1810



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 156/341 (45%), Gaps = 35/341 (10%)

Query: 87   TETGCVYATGLNDFGQLGI--SENIGYS--LEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            T+   V+ATG  + GQLG+  SE +     LE ++   +KK  + + +G  H  A++ DG
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKK--ISVHSGGRHCLALSSDG 1548

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E++ WG+  +G+LG G +       P ++E   G        G   S A+   G++ +WG
Sbjct: 1549 EVFSWGEGEDGKLGHGNRQTS--SQPKRIEFFCGKIITNICAGGSHSAAIGLNGELYTWG 1606

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
             G  GRLGHG          S  +  P+ ++ L+   V   A  +G   + CI  +  V+
Sbjct: 1607 KGRYGRLGHGD---------SDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENG 318
             +GD    K+     +  + P +I  L      +V CG   +  LT  G LYTWG  +  
Sbjct: 1658 SWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYY 1717

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
             LG G+ + +  P  V   F++  V  +SCG  H    + EG++  WG            
Sbjct: 1718 RLGHGTEEHVRRPMMVTALFNKI-VTSISCGSLHCVVCTDEGEVYCWG------------ 1764

Query: 378  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +  GQLG G  +    PT+  F  N K  ++SCG  HT A
Sbjct: 1765 DNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 6/127 (4%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P++        +  + CG   ++ LT+ G +Y  G  D+ +
Sbjct: 1659 WGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYR 1718

Query: 103  L--GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L  G  E++     P+ ++ L  K V  IS G  H    T +GE+Y WG N  GQLG G 
Sbjct: 1719 LGHGTEEHVR---RPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGT 1775

Query: 160  KAAKVIP 166
              A+  P
Sbjct: 1776 IIARQTP 1782



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/95 (37%), Positives = 50/95 (52%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG G+ E   RP++ +A     + +++CG  H +  T+ G VY  G ND GQ
Sbjct: 1711 WGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQ 1770

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            LG    I      L    L K++ +IS G  H+ A
Sbjct: 1771 LGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 41/243 (16%)

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
            T G  V + G G +G+LG G   ++          +PRL++ ++ + +K  +  +G  H 
Sbjct: 1491 TDGALVFATGYGNNGQLGLGYSETVT---------SPRLLESIKHINIKKISVHSGGRHC 1541

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYHTC 301
              +  +G V+ +G+    K+      H  R +  S  P   E  CG         G H+ 
Sbjct: 1542 LALSSDGEVFSWGEGEDGKL-----GHGNRQT--SSQPKRIEFFCGKIITNICAGGSHSA 1594

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEG 359
             +   GELYTWG    G LG G  D    P++V+       V  V+CG     T  I+  
Sbjct: 1595 AIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEA-LQFFFVLDVACGSGDAQTLCITND 1653

Query: 360  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              + W WG        DG    G+LG G       P I+        ++V CG   + AL
Sbjct: 1654 DNV-WSWG--------DG--DYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSMAL 1702

Query: 420  LEY 422
             +Y
Sbjct: 1703 TKY 1705



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 16/140 (11%)

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            LI  L     V       C+ T G  ++  G   NG LG+G  + + SP R+        
Sbjct: 1470 LIDNLLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSP-RLLESIKHIN 1528

Query: 343  VDQVSC--GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            + ++S   G +H  A+ S+G++ +WG G       ED     G+LGHGN      P  + 
Sbjct: 1529 IKKISVHSGGRHCLALSSDGEVFSWGEG-------ED-----GKLGHGNRQTSSQPKRIE 1576

Query: 400  FGENVKALQVSCGFNHTGAL 419
            F        +  G +H+ A+
Sbjct: 1577 FFCGKIITNICAGGSHSAAI 1596


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 169/387 (43%), Gaps = 60/387 (15%)

Query: 43  WGNGDYGRLGLGSLESRW----RPVVCSAFEKHSLK----ALACGGAHTLFLTETGCVYA 94
           WGN   G+LGL            P    AF   S+     A+ACG AHTLFL + G VY+
Sbjct: 88  WGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFLVD-GQVYS 146

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            G ND GQLG  +   +  +P R+  L+   + QI+ G  HS A+T +G+++ WG N   
Sbjct: 147 CGSNDQGQLGHKK---HRSKPERVDALEPYTITQIACGETHSLALTSNGQVFAWGDNKAS 203

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGL    +   P                      S   T    +       +  L +  
Sbjct: 204 QLGLTPSESSRQP------------------STRSSAPKTAAASIDDVDELDAATLAY-- 243

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
               + F+       PRL++ L G K+     G   S  + E G V+ +GD    ++  +
Sbjct: 244 ----MDFMTR-----PRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLR 294

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           E      P+L+ +L   P   ++  GG HT  LT  G++Y+WG+N+ G LG+G       
Sbjct: 295 ELKTVPVPTLVKELYGIPI-RQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTI 353

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P R++          ++CG  H+  ++E G + ++G GG             GQLGHG  
Sbjct: 354 PSRLKT-LEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQ------------GQLGHGTL 400

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHT 416
            + I+P ++       A QV CG  HT
Sbjct: 401 QNEINPRMIFELMGKSASQVLCGRRHT 427



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 107/217 (49%), Gaps = 22/217 (10%)

Query: 53  LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS 112
           L  ++   RP +  A   H +  + CG   +L L+E G V+A G N  GQL + E     
Sbjct: 241 LAYMDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRE----- 295

Query: 113 LEPLRISGLKKE-----VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           L+ + +  L KE     + Q++ G  H+ A+T +G++Y WG N  GQLG+G  A     I
Sbjct: 296 LKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHT--I 353

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P++++ L   F    A G + SV +T  G V S+GAGG G+LGHG            +E 
Sbjct: 354 PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ---------NEI 404

Query: 228 TPRLIKELEGVKVKIAAAGFLHSAC-IDENGRVYIFG 263
            PR+I EL G        G  H+     +  ++Y FG
Sbjct: 405 NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFG 441



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 10/213 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+L L  L++   P +        ++ LA GG HTL LT  G VY+ G N FGQ
Sbjct: 283 WGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQ 342

Query: 103 LGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +   +++ P R+  L+ +    I+ G  HS  +T  G +Y +G    GQLG G   
Sbjct: 343 LGVGDTAPHTI-PSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQ 401

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            ++   P  +  L G    Q   G   ++       K+ ++G GG+G+LG G     +G 
Sbjct: 402 NEI--NPRMIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTG-----VGV 454

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
                  TP L++ L+   +   A G   S C 
Sbjct: 455 EPQQHVLTPMLVRVLDATPILRIATGASASHCF 487


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 158/320 (49%), Gaps = 23/320 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D+G+LG+  ++   RP      +   +K +ACG  HT+  TE+GC+Y  G N  GQ
Sbjct: 60  FGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQ 119

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ E+I  S  P+++    ++   ++ G  HS A+T DGELY+WG  S GQLGLG    
Sbjct: 120 LGV-EDIPSSNCPVKVECEPRQYKALAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDD 178

Query: 163 KVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           K  P  + T  + +S       A G+  +  VT  G+V ++G G  G+LG G +      
Sbjct: 179 KSTPTLLSTDNKVIS------VACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYG---- 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-HAR 279
                   P+ +   E  K K  A G  H+  + E G+VY FG+    ++  +    +  
Sbjct: 229 ----KAVAPKKVNIPE--KAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKYFYCE 282

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQGP 337
            P  ++      ++  G  HT ++T  G+LYT+G   +  LG+        + P+R +  
Sbjct: 283 TPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYFPQRSKR- 341

Query: 338 FSESPVDQVSCGWKHTAAIS 357
           FS+  V QVSCG  H   ++
Sbjct: 342 FSKFIVTQVSCGGCHMIVLA 361



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 157/305 (51%), Gaps = 36/305 (11%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           K++ACG  HT  +TE+G ++  G+ND+GQLGI E +  S  P  +  LK E V+ ++ G 
Sbjct: 39  KSVACGDEHTALVTESGRLFTFGVNDWGQLGIDE-VKVSTRPCCVKKLKPEKVKVVACGR 97

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T  G LY +G N +GQLG+    +   P+  KVEC    + K  A G + SVA+
Sbjct: 98  IHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPV--KVECEPRQY-KALAAGADHSVAL 154

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++  WG G  G+LG       LG +   S  TP L+      KV   A G+ H+A 
Sbjct: 155 TDDGELYVWGGGSEGQLG-------LGDIDDKS--TPTLLS--TDNKVISVACGYYHTAF 203

Query: 253 IDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           + + G V+ FG+    K+    +   A  P  ++    ++ V CGG HT VLT  G++YT
Sbjct: 204 VTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSHTVVLTECGKVYT 263

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESP--------VDQVSCGWKHTAAISE-GKIL 362
           +G   NG LG           + +  + E+P        V Q++ G  HTA ++E G++ 
Sbjct: 264 FGEGGNGQLG----------HKNKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLY 313

Query: 363 TWGWG 367
           T+G G
Sbjct: 314 TFGDG 318



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 78/251 (31%), Positives = 120/251 (47%), Gaps = 29/251 (11%)

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           + G   K  A G E +  VT  G++ ++G    G+LG      I     ST    P  +K
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTFGVNDWGQLG------IDEVKVSTR---PCCVK 83

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EE 292
           +L+  KVK+ A G +H+    E+G +Y FG     ++  ++   +  P  +   P   + 
Sbjct: 84  KLKPEKVKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKA 143

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           +  G  H+  LT  GELY WG    G LG+G ID   +P  +    +++ V  V+CG+ H
Sbjct: 144 LAAGADHSVALTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLS---TDNKVISVACGYYH 200

Query: 353 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 410
           TA +++ G++ T+G G             GG+LG G D    + P  VN  E  KA  V+
Sbjct: 201 TAFVTDVGEVFTFGEG------------DGGKLGQGTDYGKAVAPKKVNIPE--KAKSVA 246

Query: 411 CGFNHTGALLE 421
           CG +HT  L E
Sbjct: 247 CGGSHTVVLTE 257



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 18/179 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG G  G+LGLG ++ +  P + S   K  + ++ACG  HT F+T+ G V+  G  D G
Sbjct: 162 VWGGGSEGQLGLGDIDDKSTPTLLSTDNK--VISVACGYYHTAFVTDVGEVFTFGEGDGG 219

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG   + G ++ P +++ + ++   ++ G  H+  +T  G++Y +G+  NGQLG   K 
Sbjct: 220 KLGQGTDYGKAVAPKKVN-IPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGHKNKY 278

Query: 162 AKVIPIPTKVECLSGIF------TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                      C + ++        Q A G   +  VT  G++ ++G G   +LG   E
Sbjct: 279 ---------FYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHE 328


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/332 (31%), Positives = 154/332 (46%), Gaps = 33/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     N   RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 329 GQL--GNPNSDGRPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGHGD 386

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++    P  V+    +  V  ++CG   TAAI
Sbjct: 387 VEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 160/363 (44%), Gaps = 50/363 (13%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAASNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGNVKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G+++T G++  G LG  + D    P  V+   +   V Q++CG  H A + 
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLGNPNSD--GRPCLVEDKIASEHVLQIACGSYHVAVLT 366

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT V    +     ++CG N T
Sbjct: 367 SRSEVFTWGKGAN------------GRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 417 GAL 419
            A+
Sbjct: 415 AAI 417



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 105/213 (49%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L  S  + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            R+ GP     +  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 175 RRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNVK 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 157/382 (41%), Gaps = 29/382 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G LG G+      P+        ++ A+A G  H+L +T  G   A G N FGQ
Sbjct: 77  WGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQ 136

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +       V  I+ G  HS A+T  G    WG N  G+LG G   
Sbjct: 137 LGDGSTTDSS-TPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTT 195

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V+  +G      A G   S+A+T  G VL+WG    G+LG G         
Sbjct: 196 RRDTPV--DVDLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGT-------- 245

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  +    G  V   AAG LHS  +   G +  +G+ +  ++      ++  P
Sbjct: 246 -TTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTP 304

Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  LP S  +     G  H+  +TS G    WG N++G LG G+     +P  V  P 
Sbjct: 305 IAV-NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPA 363

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             +     +      A  + G IL W            G++S G+LG G   +   P  V
Sbjct: 364 DTTVTATTAGSLHSLAVTTAGTILAW------------GNNSDGRLGDGTTTNSSTPIAV 411

Query: 399 NFGENVKALQVSCGFNHTGALL 420
           N   +      + G  H+ AL+
Sbjct: 412 NLPADTTVTATTAGSAHSMALV 433



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 104/269 (38%), Gaps = 35/269 (13%)

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-----VLSWGAGGSGRLGHGQE 214
           +A +V+   T   CL+   T    L    +VA  G  +     VL+WG    G LG G  
Sbjct: 34  RAGRVV---TGAFCLALAVTLAQTLSVSPTVAQNGPSRDASDTVLAWGDNKDGELGDGT- 89

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T   TP  +    G  +   AAG  HS  +   G    +G+    ++    
Sbjct: 90  --------TTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGS 141

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +  P  +  LP    V     G  H+  +TS G    WG N+ G LG G+     +P
Sbjct: 142 TTDSSTPIAV-DLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTP 200

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V  P   + V  ++ G  H+ A+ S G +LTWG             +S GQLG G   
Sbjct: 201 VDVDLPAGTT-VTAIAAGIGHSLALTSAGTVLTWGL------------NSDGQLGDGTTT 247

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           D   P  V+         ++ G  H+ A+
Sbjct: 248 DSSTPIAVDLPAGTTVTAIAAGSLHSLAV 276


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 165/350 (47%), Gaps = 24/350 (6%)

Query: 19  KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
           +LG+    C  + S     +   +WG GD GRLG+ +  ++++P V    ++  ++  + 
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           GG H + LTE G VY  G   FG LG        L  L     K  +V +S G  HS+A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAV 202

Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           T  GELY WG++   G+LG G         +  PTKV+ L          GF  ++A+T 
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGF-FTMALTK 261

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ SWG   +  LGHG  +         + + P+++  LE V +   A G  H+A + 
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTW 312
           ++G+V  +G     ++      + + P+++  +       + CG   T  +T  G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 313 GSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWKHTAAI 356
           G N +  LGI G  D    P  VQ P     ++PV+   VSCG  H   I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 58/405 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
           WG G +G++G GS ++   PV+ S  +  +   +A                  CG  H++
Sbjct: 40  WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
              E   V+  G  D G+LGI        +P  ++   K V   S G  H+ A+T  G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           Y WG  + G LG G    +++P       L G +  +    + G   S AVT  G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHSAAVTESGELYTW 211

Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           G   G GRLGHG        +   +   P  ++ L+     +   GF  +  + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALDVPIASVYCGGFF-TMALTKSGQLW 266

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G  A  ++      +  +P +++ L      +V CGG+H   LT  G++ TWG   NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
            LG G+++    P  V+   ++     ++CG   TAAI+E G + TWG    +       
Sbjct: 327 QLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRDY------- 378

Query: 378 HSSGGQLG-HGNDVDYIHPTIVNFGE------NVKALQVSCGFNH 415
                QLG  G   + + P +V F +       V+ L VSCG NH
Sbjct: 379 -----QLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANH 418



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 156/337 (46%), Gaps = 64/337 (18%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---P 168
           SL+  RI  L   V         SS    + E++ WG+ ++GQ+G G +  + +P+    
Sbjct: 14  SLQRRRIGYLADRV---------SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLIST 64

Query: 169 TKVECLSGIFTKQAALGFEQ---SVAVTGG---------GKVLSWGAGGSGRLGHGQESS 216
            K+   +G+   Q  +  +    +V VT G           V  WG G  GRLG   E  
Sbjct: 65  LKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE-- 122

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   ++Y P +   ++  +V++A+AG LH+  + E G VY +G  A   +    G+
Sbjct: 123 -------FNQYKPYVNPRIK--RVQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GH 169

Query: 277 HARRPSLISKL---PYSEEVV---CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDV-- 327
            +    L+ +L   P+ + +V    GG H+  +T  GELYTWG +E  G LG G+ D+  
Sbjct: 170 GSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMD 229

Query: 328 ---LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
              L  P +VQ    + P+  V CG   T A+++   L W WGG+          +  +L
Sbjct: 230 EGALSRPTKVQA--LDVPIASVYCGGFFTMALTKSGQL-WSWGGN----------ANHEL 276

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GHG   +   P +V   E+V  +QV+CG  H  AL +
Sbjct: 277 GHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ 313


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 167/341 (48%), Gaps = 28/341 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVV----CSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG G  G+LGLG  E    PV       A    ++  +ACG  HTL L + G V + G N
Sbjct: 5   WGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASCGDN 64

Query: 99  DFGQLGISENIGY---SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
             GQLG     G    S  P  I  L+ ++VV +S G  HS A+   G +Y WG  + GQ
Sbjct: 65  SRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGTFGQ 124

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G+   ++  IP  +  LS     Q A G + S+A+T  G++ SWG    G+LG G++
Sbjct: 125 LGTGELGDRL--IPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQLGLGKD 182

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            S        S+ +P+ +  L+G+ +   AAG  HS  +  +G VY +G     ++   +
Sbjct: 183 IS--------SQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQLGLSQ 234

Query: 275 GNHAR---RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                   +P  I+ L   +   V CG  HT VLT  G +YT+G +  G LG  S     
Sbjct: 235 AKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRNSSSSPK 294

Query: 330 -SPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
             P++V+  + + PV  ++CG  HT     + G++L++G G
Sbjct: 295 FGPQKVE--WIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 139/312 (44%), Gaps = 39/312 (12%)

Query: 92  VYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +Y  G    GQLG+ +  G S      P   +   + VV ++ G  H+  +  DG +   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 148 GKNSNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           G NS GQLG  L     K    P  ++ L        + G E S+AV   G+V SWGAG 
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYSWGAGT 121

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G+    LG         P+ I  L   KV   A G  HS  +  +GR++ +G  
Sbjct: 122 FGQLGTGE----LG-----DRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQN 172

Query: 266 AVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
              ++ L ++ +    P  +S L   P ++ V  GG H+  L+  G +Y WG N    LG
Sbjct: 173 IHGQLGLGKDISSQASPQQVSALDGIPLAQ-VAAGGAHSFALSLSGVVYGWGRNNAHQLG 231

Query: 322 IGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
           +         E++  P+S + +       VSCG +HTA +++         GS  TF +D
Sbjct: 232 LSQAK---PKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ--------NGSVYTFGDD 280

Query: 377 GHSSGGQLGHGN 388
              S GQLG  +
Sbjct: 281 ---SAGQLGRNS 289



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 124/284 (43%), Gaps = 21/284 (7%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTK--VECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           LY WG+ S GQLGLGK      P+P +      +       A G   ++ +   G V S 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G    G+LG    S      +    Y P LI+ LE  KV   + G  HS  +   GRVY 
Sbjct: 62  GDNSRGQLGRRLPSG-----QEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVYS 116

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G     ++   E      P  I+ L   +  +V CG  H+  LT+ G +++WG N +G 
Sbjct: 117 WGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSWGQNIHGQ 176

Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
           LG+G  I    SP++V       P+ QV+ G  H+ A+S   ++ +GWG        + H
Sbjct: 177 LGLGKDISSQASPQQVSA-LDGIPLAQVAAGGAHSFALSLSGVV-YGWG------RNNAH 228

Query: 379 SSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGALLE 421
             G  L      + I  P  +    ++    VSCG  HT  L +
Sbjct: 229 QLG--LSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQ 270



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 90/170 (52%), Gaps = 5/170 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P   SA +   L  +A GGAH+  L+ +G VY  G N+  
Sbjct: 169 WGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228

Query: 102 QLGISENIGYS--LEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+S+        +P  I+ L+  +V  +S G  H++ +T +G +Y +G +S GQLG  
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLGRN 288

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             ++     P KVE + G  +  A   +   V ++  G++LS+G G   R
Sbjct: 289 SSSSPKFG-PQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRGPLQR 337


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 153/340 (45%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 334 WGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 394 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV------------TGGGKVLSWGAGGS 206
            +  K I +P +VE L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 453 DR--KSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +     +G VY  G   
Sbjct: 511 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVARTTSGHVYTMGS-- 559

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 560 --PVYGQLGN----PLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 613

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  D  +SP  V+    +  V  ++CG   TAAI
Sbjct: 614 NGRLGHGDTDDRNSPSLVEA-LKDKQVKSIACGTSFTAAI 652



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 181/370 (48%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   + P  I  L    ++ ++
Sbjct: 312 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---MHPKLIDALSNTNIELVA 368

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 369 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 426

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   SI           P+ ++ L+G++   AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGVLGHGDRKSI---------SLPKEVESLKGLRTVQAACG 477

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 478 VWHTAAVIEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 535

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T   T+ G +YT GS   G LG    D    P RV+G  S+S V++++CG 
Sbjct: 536 CQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADG-KLPTRVEGKLSKSFVEEIACGA 594

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S+ ++ TWG G +            G+LGHG+  D   P++V   ++ +   +
Sbjct: 595 YHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNSPSLVEALKDKQVKSI 642

Query: 410 SCGFNHTGAL 419
           +CG + T A+
Sbjct: 643 ACGTSFTAAI 652



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 40/270 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P  +E    +  +  A G + +  VT  G++ SWG    GRLGHG +S ++        
Sbjct: 300 FPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM-------- 351

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 352 -HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 410

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P+ V+      
Sbjct: 411 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLR 470

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V Q +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 471 TV-QAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGD 517

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
               + PT V         QV+CG + T A
Sbjct: 518 KEAKLVPTCVAALVEPNFCQVACGHSLTVA 547



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 301 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALS 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 419

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 420 SSISCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRKSISLPKEVESLK 467

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ +Q +CG  HT A++E +
Sbjct: 468 GLRTVQAACGVWHTAAVIEVM 488


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 166/333 (49%), Gaps = 32/333 (9%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           S+K +ACGG H++FL E G VY  G N  GQLG  E  G   +P +I  L  + +V ++ 
Sbjct: 36  SIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLG-HEREGN--KPEQIGALADQHIVHVAC 92

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  HS A++  G+L+ WG  S+GQLG        + IP  ++ L+     Q + G    +
Sbjct: 93  GESHSLALSDQGQLFSWGAGSDGQLG-HTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCM 151

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+   G+  +WG    G+LG G+E          S+ +P+ +K LEG+ +   AAG  HS
Sbjct: 152 ALAADGQFFTWGQNRHGQLGLGKE--------FPSQASPQRVKSLEGIPLAQVAAGGAHS 203

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
             +  +G V+ +G     ++   +    + P  + KL  +++VV   CG  HT VLT  G
Sbjct: 204 FALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHV-KLLRTQKVVYISCGEEHTAVLTKSG 262

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
            ++T+G+   G LG  S++   +P RV      S V Q++CG +HT A   S G I  +G
Sbjct: 263 GVFTFGAGSFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFG 321

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            G              GQLG G+  +   P+ V
Sbjct: 322 CGAR------------GQLGTGHTCNVKCPSPV 342



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 14/280 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG +        P  I  
Sbjct: 75  KPEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L ++++ Q+S G  H  A+  DG+ + WG+N +GQLGLGK+       P +V+ L GI  
Sbjct: 135 LNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS-PQRVKSLEGIPL 193

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   +G+LG   E         T   +P  +K L   K
Sbjct: 194 AQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDE---------TDRQSPCHVKLLRTQK 244

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + ++G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 245 VVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGR 304

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            HT     S G +Y +G    G LG G    +  P  V+G
Sbjct: 305 QHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 344



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 149/324 (45%), Gaps = 33/324 (10%)

Query: 104 GISENI-GYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           GIS N+ G   EP     +  + + +++ G +HS  +  DGE+Y  G N+ GQLG  ++ 
Sbjct: 14  GISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTKGQLGHEREG 73

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K    P ++  L+       A G   S+A++  G++ SWGAG  G+LGH          
Sbjct: 74  NK----PEQIGALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTED----- 124

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
              S   PRLIK+L    +   + G  H   +  +G+ + +G     ++     F     
Sbjct: 125 ---SVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQAS 181

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            +R   +  +P ++ V  GG H+  L+  G ++ WG N  G LG+       SP  V+  
Sbjct: 182 PQRVKSLEGIPLAQ-VAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-L 239

Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
                V  +SCG +HTA +++ G + T+G G            S GQLGH +  D ++P 
Sbjct: 240 LRTQKVVYISCGEEHTAVLTKSGGVFTFGAG------------SFGQLGHDSMNDEVNPR 287

Query: 397 IVNFGENVKALQVSCGFNHTGALL 420
            V      +  Q++CG  HT A +
Sbjct: 288 RVLELMGSEVTQIACGRQHTLAFV 311



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 30/282 (10%)

Query: 144 LYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +  WG  S G  G +      ++  P     +S    K+ A G   S+ +   G+V + G
Sbjct: 1   MLCWGYWSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG 60

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +   G+LGH +E +            P  I  L    +   A G  HS  + + G+++ +
Sbjct: 61  SNTKGQLGHEREGN-----------KPEQIGALADQHIVHVACGESHSLALSDQGQLFSW 109

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G  +  ++      +    P LI KL      +V CG +H   L + G+ +TWG N +G 
Sbjct: 110 GAGSDGQLGHTTTEDSVAIPRLIKKLNQQMILQVSCGNWHCMALAADGQFFTWGQNRHGQ 169

Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           LG+G       SP+RV+      P+ QV+ G  H+ A+S  G +  WG            
Sbjct: 170 LGLGKEFPSQASPQRVKS-LEGIPLAQVAAGGAHSFALSLSGAVFGWG------------ 216

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++ GQLG  ++ D   P  V      K + +SCG  HT  L
Sbjct: 217 RNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVL 258



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL     R  P          +  ++CG  HT  LT++G V+  G   FGQ
Sbjct: 215 WGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQ 274

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  +++   + P R+  L   EV QI+ G  H+ A +   G +Y +G  + GQLG G  
Sbjct: 275 LG-HDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHT 333

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 334 CNVKCPSPVK 343


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 173/343 (50%), Gaps = 37/343 (10%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G +HTL L   G V+A G ND+GQLG +  I  +  P+ + GL K V  IS G ++S A+
Sbjct: 183 GESHTLALESDGTVWACGENDYGQLGNNNTIDIN-SPIPVEGLNK-VSSISAGKYYSMAL 240

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             DG ++ WG+N  GQLG G  A ++ P+  +V+ LSGI    +  G   S+A+   G V
Sbjct: 241 KSDGTVWTWGENDYGQLGDGTTATRLSPV--QVQNLSGIIAISS--GNSHSLALKDDGTV 296

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            +WG   SG+LG G          + S+Y P  ++ L G+ V I + GF +S  +  +G 
Sbjct: 297 WAWGDNESGQLGDG---------TTNSKYIPSQVQGLSGI-VSI-SCGFYYSMALKNDGT 345

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+++GD    ++   +G    R +   +S L     + CG  H+  L + G ++TWG N 
Sbjct: 346 VWVWGDNTSGQL--GDGTTTDRNTAVPVSGLDGVIAIACGVNHSMALRNDGTVWTWGFNA 403

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
            G LG G+    ++   + G      +  ++CG  H+ A+ +   + W WG +       
Sbjct: 404 FGQLGDGTKVSKNTAVPISGL---DGIIAITCGTSHSMALKDDGTV-WAWGDNQ------ 453

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                GQLG+G  +    P+ V+    +K+  + CG++ + AL
Sbjct: 454 ----YGQLGNGTFISNTTPSQVSNLSGIKS--IFCGYSTSFAL 490



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 182/380 (47%), Gaps = 43/380 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  DYG+LG  +      P+      K S  +++ G  +++ L   G V+  G ND+GQL
Sbjct: 200 GENDYGQLGNNNTIDINSPIPVEGLNKVS--SISAGKYYSMALKSDGTVWTWGENDYGQL 257

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G        L P+++  L   ++ IS+G  HS A+  DG ++ WG N +GQLG G   +K
Sbjct: 258 G-DGTTATRLSPVQVQNLSG-IIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSK 315

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
              IP++V+ LSGI +   + GF  S+A+   G V  WG   SG+LG G          +
Sbjct: 316 Y--IPSQVQGLSGIVS--ISCGFYYSMALKNDGTVWVWGDNTSGQLGDG---------TT 362

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T   T   +  L+GV     A G  HS  +  +G V+ +G  A  ++   +G    + + 
Sbjct: 363 TDRNTAVPVSGLDGVIA--IACGVNHSMALRNDGTVWTWGFNAFGQL--GDGTKVSKNTA 418

Query: 284 --ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             IS L     + CG  H+  L   G ++ WG N+ G LG G+     +P +V    + S
Sbjct: 419 VPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTPSQVS---NLS 475

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVN 399
            +  + CG+  + A+  +G +  W W          G++  G+LG G     I+PT  +N
Sbjct: 476 GIKSIFCGYSTSFALKPDGTV--WAW----------GNNEYGELGKGFTTRVIYPTETLN 523

Query: 400 FGENVKALQVSCGFNHTGAL 419
            G+ +KA  +S G +H  AL
Sbjct: 524 IGD-IKA--ISIGSSHCLAL 540



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 178/380 (46%), Gaps = 41/380 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G+  +R  PV         + A++ G +H+L L + G V+A G N+ GQ
Sbjct: 249 WGENDYGQLGDGTTATRLSPVQVQNLS--GIIAISSGNSHSLALKDDGTVWAWGDNESGQ 306

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + N  Y   P ++ GL   +V IS G+++S A+  DG +++WG N++GQLG G   
Sbjct: 307 LGDGTTNSKYI--PSQVQGLSG-IVSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTT 363

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +   +P  V  L G+     A G   S+A+   G V +WG    G+LG G +       
Sbjct: 364 DRNTAVP--VSGLDGVI--AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGTK------- 412

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              S+ T   I  L+G+       G  HS  + ++G V+ +GD    ++          P
Sbjct: 413 --VSKNTAVPISGLDGIIA--ITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTTP 468

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSE 340
           S +S L   + + CG   +  L   G ++ WG+NE G LG G +  V++  E      + 
Sbjct: 469 SQVSNLSGIKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTET----LNI 524

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             +  +S G  H  A+ ++G +  W WG +            GQLG G       P  V+
Sbjct: 525 GDIKAISIGSSHCLALKNDGTV--WAWGDNR----------YGQLGDGTTTIKSLPVQVS 572

Query: 400 FGENVKALQVSCGFNHTGAL 419
               + A  +S G +H+ AL
Sbjct: 573 GISGITA--ISAGGSHSLAL 590



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 150/328 (45%), Gaps = 29/328 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G+LG G+   R   V  S  +   + A+ACG  H++ L   G V+  G N FG
Sbjct: 348 VWGDNTSGQLGDGTTTDRNTAVPVSGLD--GVIAIACGVNHSMALRNDGTVWTWGFNAFG 405

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +  +   + ISGL   ++ I+ G  HS A+  DG ++ WG N  GQLG G   
Sbjct: 406 QLGDGTKVSKN-TAVPISGLDG-IIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFI 463

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +     P++V  LSGI  K    G+  S A+   G V +WG    G LG G         
Sbjct: 464 SNT--TPSQVSNLSGI--KSIFCGYSTSFALKPDGTVWAWGNNEYGELGKG--------- 510

Query: 222 RSTSEYTPRLIKELEGVK---VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +T R+I   E +    +K  + G  H   +  +G V+ +GD    ++        
Sbjct: 511 -----FTTRVIYPTETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQLGDGTTTIK 565

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +S +     +  GG H+  L S G ++ WG N  G LG G+ +  ++P +V    
Sbjct: 566 SLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVS--- 622

Query: 339 SESPVDQVS-CGWKHTAAISEGKILTWG 365
             S +  +S C ++  A  ++G +  WG
Sbjct: 623 ELSGITVISNCIYRSFALKNDGTVWVWG 650



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 140/326 (42%), Gaps = 36/326 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN +YG LG G       P          +KA++ G +H L L   G V+A G N +GQ
Sbjct: 499 WGNNEYGELGKGFTTRVIYP--TETLNIGDIKAISIGSSHCLALKNDGTVWAWGDNRYGQ 556

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       SL P+++SG+   +  IS G  HS A+  DG ++ WG+N+ GQLG G K  
Sbjct: 557 LGDGTTTIKSL-PVQVSGISG-ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKED 614

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LSGI      +   +S A+   G V  WG+          +S  L   +
Sbjct: 615 RNTPV--QVSELSGITVISNCI--YRSFALKNDGTVWVWGS----------DSYNLPLEK 660

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P  I  L G+       G  H+  +  +G V+ +G     +           P 
Sbjct: 661 MT---MPIQISGLSGIIA--IECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPV 715

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L   + +  GG  +  L S G ++ W          G I V  SP  V+   +   
Sbjct: 716 QVSGLSGVKAIAVGGNRSIALKSDGTVWQW----------GRILVSVSPSTVETWTTARQ 765

Query: 343 VD---QVSCGWKHTAAISEGKILTWG 365
           VD   ++     + A  ++GK+ TWG
Sbjct: 766 VDGLSEIVSISNNVALKNDGKVFTWG 791



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 33/302 (10%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           ++  ++++S G  H+ A+  DG ++  G+N  GQLG         PIP  VE L+ + + 
Sbjct: 173 IEGPIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIP--VEGLNKVSSI 230

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A  G   S+A+   G V +WG    G+LG G  ++ L         +P  ++ L G+  
Sbjct: 231 SA--GKYYSMALKSDGTVWTWGENDYGQLGDGTTATRL---------SPVQVQNLSGIIA 279

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
              ++G  HS  + ++G V+ +GD    ++     N    PS +  L     + CG Y++
Sbjct: 280 --ISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYS 337

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
             L + G ++ WG N +G LG G+    ++   V G      V  ++CG  H+ A+ ++G
Sbjct: 338 MALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL---DGVIAIACGVNHSMALRNDG 394

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + TWG+            ++ GQLG G  V     T V        + ++CG +H+ AL
Sbjct: 395 TVWTWGF------------NAFGQLGDGTKVS--KNTAVPISGLDGIIAITCGTSHSMAL 440

Query: 420 LE 421
            +
Sbjct: 441 KD 442



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 21/176 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+ G G+  +   PV  S      +KA+A GG  ++ L   G V+      +G+
Sbjct: 695 WGKNNFGQFGDGTTTTTNIPVQVSGLS--GVKAIAVGGNRSIALKSDGTVW-----QWGR 747

Query: 103 LGIS---ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           + +S     +       ++ GL  E+V IS    ++ A+  DG+++ WG N  GQLG G 
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLS-EIVSIS----NNVALKNDGKVFTWGANDYGQLGDGT 802

Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             A+V   P   +E ++G+ +         S+ +   G + +WG    G+LG+G+ 
Sbjct: 803 TTARVTVAPVSGLEGVAGVASSDTT-----SMVLMNDGTIRAWGKNNFGQLGNGER 853


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 160/337 (47%), Gaps = 30/337 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 285 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 344

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 345 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 403

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   + AV         T  GK+ +WG G   RL
Sbjct: 404 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 461

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       A  G   +  +  +G ++  G  +V  
Sbjct: 462 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 511

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT  GE+YTWG   NG LG G I 
Sbjct: 512 QLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 571

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
              +P  V+    +  V +++CG   TAAI + K ++
Sbjct: 572 DRKTPTFVEA-LRDRSVKRIACGSGFTAAICQHKSVS 607



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 171/369 (46%), Gaps = 53/369 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V  I+ G  
Sbjct: 266 VACGVKHAALVTRQAEVFTWGEECSGRLG--HGAGTSIFQPRLVESLSICNVETIACGEF 323

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ AIT  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   + 
Sbjct: 324 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLEGLQVSAVSCGTWHTA 381

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  GK+ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  H+
Sbjct: 382 LITSSGKLYTFGDGTFGVLGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHT 432

Query: 251 ACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVV 294
           A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + V
Sbjct: 433 AAVVEVIMAQSNTSSGKLFTWGDG--DKYRLGHGDRSSKLKPTCVPSLID---YNFHKAV 487

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G ++T GS+  G LG  + D  + P  V+       V +V+CG  H A
Sbjct: 488 CGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRY-PRLVEEKLGGGGVVEVACGAYHVA 546

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            +++ G++ TWG G +            G+LGHG+  D   PT V    +    +++CG 
Sbjct: 547 VLTQSGEVYTWGKGAN------------GRLGHGDIADRKTPTFVEALRDRSVKRIACGS 594

Query: 414 NHTGALLEY 422
             T A+ ++
Sbjct: 595 GFTAAICQH 603



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 53/309 (17%)

Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG        +  +        AA  I +P  +E    +     A G + +  VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +SI         + PRL++ L    V+  A G  H+  I
Sbjct: 278 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 328

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S  P        V CG +HT ++TS G
Sbjct: 329 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 387

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +LYT+G    G LG G+ + +  P+ V+       +  VSCG  HTAA+ E         
Sbjct: 388 KLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIMAQSNTS 446

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV------NFGENVKALQVSC 411
            GK+ TWG G  +            +LGHG+    + PT V      NF + V    ++ 
Sbjct: 447 SGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTI 494

Query: 412 GFNHTGALL 420
           G   +G + 
Sbjct: 495 GLTTSGHIF 503



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 108/219 (49%), Gaps = 19/219 (8%)

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G +S+      +T    P+ ++    + V   A G  H+A +     V+ +G+    ++
Sbjct: 234 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 293

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +
Sbjct: 294 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 352

Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
           V H  P+RV GP     V  VSCG  HTA I S GK+ T+G     GTF        G L
Sbjct: 353 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTF--------GVL 400

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GHGN     +P  V   + ++ + VSCG  HT A++E +
Sbjct: 401 GHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 439


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 142/303 (46%), Gaps = 16/303 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG     +R  PV     E H++  +ACG  HTL   E G V+A G N  GQ
Sbjct: 58  FGLNDYGQLGHCRSRTRAEPV--DGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQ 115

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG++        P  +  L  K+VVQI+ G  HS A+T  GE+Y WG NS+GQLGLG   
Sbjct: 116 LGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSG 175

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  V+ L GI     + G + S AVT  G V  WG    G+LG G         
Sbjct: 176 TPETK-PCLVKLLQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGD-------- 226

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T    P  +K L   +V     G  H+A +  +G V+ FG     ++      +   P
Sbjct: 227 -TTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLP 285

Query: 282 SLISKL--PYSEEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + +L      ++ CG  HT     S G +Y +G   +G LG  S   ++SP+ V GP+
Sbjct: 286 RKVLELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGPW 345

Query: 339 SES 341
             S
Sbjct: 346 ETS 348



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 159/326 (48%), Gaps = 30/326 (9%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS 136
           CG  HT+ + + G +++ GLND+GQLG   +   + EP  + GL+   + Q++ G  H+ 
Sbjct: 41  CGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRA-EP--VDGLEAHNITQVACGAQHTL 97

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           A    GE++ WG NSNGQLGL  + + ++P P  V+ L+     Q A G   S+A+T  G
Sbjct: 98  AQNEWGEVFAWGSNSNGQLGLNVEES-MMPTPKMVKSLATKQVVQIACGRSHSMALTNVG 156

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           ++  WG+   G+LG G           T E  P L+K L+G+ +   + G   S  +  +
Sbjct: 157 EIYCWGSNSHGQLGLGSS--------GTPETKPCLVKLLQGIPISHISCGADFSFAVTPS 208

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G VY +G  +  ++   +     +P+ +  L +     + CG  HT  LT  G ++T+G+
Sbjct: 209 GAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGA 268

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGT 372
              G LG  +      P +V      + V Q+ CG  HT A   S+G+I  +G GGS   
Sbjct: 269 GMYGQLGHCTSANEMLPRKVLELMGTT-VTQICCGRCHTLAFVPSKGRIYAFGLGGS--- 324

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIV 398
                    GQLG  +  +   P +V
Sbjct: 325 ---------GQLGTKSTANVNSPQLV 341



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 138/306 (45%), Gaps = 33/306 (10%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L  ++VQ+  G +H+  +  DG+L+ +G N  GQLG  +   +  P    V+ L      
Sbjct: 32  LVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP----VDGLEAHNIT 87

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q A G + ++A    G+V +WG+  +G+LG   E S++         TP+++K L   +V
Sbjct: 88  QVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP--------TPKMVKSLATKQV 139

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
              A G  HS  +   G +Y +G  +  ++ L   G    +P L+  L   P S  + CG
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPIS-HISCG 198

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAA 355
              +  +T  G +Y WG N  G LG+G  D    P+  Q        V  + CG  HTAA
Sbjct: 199 ADFSFAVTPSGAVYGWGKNSFGQLGLG--DTTDRPQPTQLKSLRFQRVTYIRCGMDHTAA 256

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ +G + T+G G              GQLGH    + + P  V         Q+ CG  
Sbjct: 257 LTRDGGVFTFGAGMY------------GQLGHCTSANEMLPRKVLELMGTTVTQICCGRC 304

Query: 415 HTGALL 420
           HT A +
Sbjct: 305 HTLAFV 310



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 25/279 (8%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG+  +G+LGLG    ++I  P            Q   G   ++ V   GK+ S+G 
Sbjct: 1   MFCWGRMKHGELGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGL 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH          RS +   P  +  LE   +   A G  H+   +E G V+ +G
Sbjct: 61  NDYGQLGH---------CRSRTRAEP--VDGLEAHNITQVACGAQHTLAQNEWGEVFAWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++ L  E +    P ++  L   +  ++ CG  H+  LT+ GE+Y WGSN +G L
Sbjct: 110 SNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
           G+GS     +   +       P+  +SCG   + A++    + +GW          G +S
Sbjct: 170 GLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAV-YGW----------GKNS 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG G+  D   PT +      +   + CG +HT AL
Sbjct: 219 FGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAAL 257


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G I+    P  V+    +  V  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 161/363 (44%), Gaps = 50/363 (13%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G+++T G++  G LG  +++    P  V+   +   V Q++CG  H A + 
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLT 366

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT V    +     ++CG N T
Sbjct: 367 SRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 417 GAL 419
            A+
Sbjct: 415 AAI 417



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            R+ GP     +  VSCG  HTA I S G++ T+G G            S G LGHG+  
Sbjct: 175 RRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGDLK 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/323 (33%), Positives = 147/323 (45%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG G ++S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3952 GYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4011

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    I Y    L  + L  E+V I+ G HHS+AI+  G LY WGK   G+LG G   
Sbjct: 4012 KLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSD 4071

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   PT V  L G      A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4072 DQL--KPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4123

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4124 ---SDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4180

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  +S L   +   +  G  H    +  GE+YTWG N+ G LG G+     SP  V   
Sbjct: 4181 RPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHA- 4239

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4240 LQGKNITRVACGSAHTLAWSTTK 4262



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 150/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2980 GEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3039

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    +    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3040 KLGHGNRVSLD-KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3098

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +   P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3099 TTHL--KPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG----- 3151

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   Y+P  +  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3152 ----SDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3207

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3208 RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTMVNRKPSLVHN 3267

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++V+CG  H+ A
Sbjct: 3268 -LEDAKVNRVACGSSHSIA 3285



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 164/356 (46%), Gaps = 57/356 (16%)

Query: 86   LTETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
            + +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S      
Sbjct: 2918 VQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQ----- 2972

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
                 +G+LY  G+ +NG+LGLG       P P  +  LS    K+ A+  G + ++A+T
Sbjct: 2973 -----EGKLYACGEGTNGRLGLGDNNNVGEPKP--IPFLSQYIIKKVAVHSGGKHALALT 3025

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              GKV SWG G  G+LGHG   S+           PRLI+ L+  +++  A G  HSA I
Sbjct: 3026 QDGKVFSWGEGEDGKLGHGNRVSL---------DKPRLIEALKSKRIRDIACGSGHSAAI 3076

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGEL 309
              NG +Y +G     ++   +     +P L+  L      +V CG     T  LT  G +
Sbjct: 3077 ASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSV 3136

Query: 310  YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
            Y+WG  + G LG G  D  +SP   +R+ G      V QV CG + + A+++ G++ TWG
Sbjct: 3137 YSWGDGDFGKLGRGGSDGCYSPLPVDRLNG----LGVVQVECGAQFSLALTKYGEVWTWG 3192

Query: 366  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3193 KGDYF------------RLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD 3236



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 195/399 (48%), Gaps = 40/399 (10%)

Query: 32   SSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-T 87
            +S +Q+  A  +WG  D  +LG G   S+ + PV      K  LK +   GG+ TLF+ +
Sbjct: 2915 ASDVQQNAAVYVWGLNDKDQLG-GLKGSKIKLPVHSEVLSK--LKPIHIAGGSKTLFVVS 2971

Query: 88   ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGEL 144
            + G +YA G    G+LG+ +N     EP  I  L + +++   + +G  H+ A+T DG++
Sbjct: 2972 QEGKLYACGEGTNGRLGLGDNNNVG-EPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKV 3030

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
            + WG+  +G+LG G + +  +  P  +E L     +  A G   S A+   G++ +WG G
Sbjct: 3031 FSWGEGEDGKLGHGNRVS--LDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLG 3088

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIF 262
              GRLGHG          +T+   P+L+  L G +V   A G     +  + E+G VY +
Sbjct: 3089 EYGRLGHGD---------TTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSW 3139

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
            GD    K+     +    P  + +L      +V CG   +  LT  GE++TWG  +   L
Sbjct: 3140 GDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3199

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
            G G+   +  P  V+G      V  V+ G  H  A+++ G++  WG         ++ H 
Sbjct: 3200 GHGNDHHVRRPTLVEG-LRGKKVVHVAVGALHCLAVTDAGQVYAWG---------DNDH- 3248

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
              GQ G+G+ +    P++V+  E+ K  +V+CG +H+ A
Sbjct: 3249 --GQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIA 3285



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 158/330 (47%), Gaps = 44/330 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  +P +  A +   ++ +ACG  H+  +   G +Y  GL ++G+
Sbjct: 3033 WGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3092

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  +   + L+P  +  L  + V+Q++ G     + A+T DG +Y WG    G+LG G 
Sbjct: 3093 LGHGDTTTH-LKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGRGG 3151

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  P+P  V+ L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3152 SDGCYSPLP--VDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV-- 3207

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P L++ L G KV   A G LH   + + G+VY +GD        Q+GN + 
Sbjct: 3208 -------RRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGST 3256

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               R+PSL+  L  ++   V CG  H+           W   +   LG        + E 
Sbjct: 3257 MVNRKPSLVHNLEDAKVNRVACGSSHS---------IAWVLTDQPTLG--------NQEP 3299

Query: 334  VQGPFSESPVDQVSCGWKHTAAISEGKILT 363
            V  P ++ P+ Q + G+  T   +E  ++T
Sbjct: 3300 VTFPTAKDPLGQATLGF--TQDKTETNVVT 3327



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 171/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P+ C +        LA GG  TLF +T  G VYATG    G
Sbjct: 3899 WGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLA-GGEQTLFAVTADGKVYATGYGALG 3957

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG     S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3958 RLGTGGVDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4015

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G +       P  +E L G      A G   S A++  G + +WG G  GRLGHG     
Sbjct: 4016 GNRI--TYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGD---- 4069

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P ++  L+G KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4070 -----SDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4124

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4125 DGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4184

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TW            G +  GQLG G     
Sbjct: 4185 VSA-LQGKKIVSIATGSLHCVACSDKGEVYTW------------GDNDEGQLGDGTTHAQ 4231

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +     +V+CG  HT A
Sbjct: 4232 QSPRLVHALQGKNITRVACGSAHTLA 4257



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 152/342 (44%), Gaps = 40/342 (11%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + T Q   A  WGN  +G    GS+     P  C A  +  +K L C     L L+ +G 
Sbjct: 429 TQTFQEVLA--WGNVHFGS---GSM-----PFYCDAIAEIGVKQLCCTERALLILSLSGK 478

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGK 149
           VY        Q            P  + G   +VVQI++     H  A+T  G +Y WG 
Sbjct: 479 VYMMYYGSETQY-----------PQSVYGFADDVVQIASHPDGKHYLALTTKGIVYSWGN 527

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              G+LG G   +     P  +E LS       A G   S A++  G++L+WG G  GRL
Sbjct: 528 GDGGRLGHGDSFS--CDEPQVIEVLSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRL 585

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAV 267
           GHG    I           P ++  L G  V   A  +G   + C+  +G V+ +GD   
Sbjct: 586 GHGICDDI---------SIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDY 636

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            K+     + ++ P ++ KL      +V CGG  +  LT+ GE+YTWG  ++  LG G+ 
Sbjct: 637 GKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNE 696

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
           + +  P+ V+G      V  +S G  H  AI+E + L +GWG
Sbjct: 697 EHVRFPKLVEG-LRNKKVRDLSVGNLHILAITEDQ-LVYGWG 736



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 138/306 (45%), Gaps = 31/306 (10%)

Query: 124  EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            EVVQ       +S +  +  +Y+WG N   QLG G K +K I +P   E LS +     A
Sbjct: 2904 EVVQEQMTAQRASDVQQNAAVYVWGLNDKDQLG-GLKGSK-IKLPVHSEVLSKLKPIHIA 2961

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G +    V+  GK+ + G G +GRLG G  +++           P+ I  L    +K  
Sbjct: 2962 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDNNNV---------GEPKPIPFLSQYIIKKV 3012

Query: 244  A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
            A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG  H
Sbjct: 3013 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGH 3072

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAIS 357
            +  + S GELYTWG  E G LG G       P+ V     +  V QV+CG +   T A++
Sbjct: 3073 SAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQR-VIQVACGSRDAQTMALT 3131

Query: 358  E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            E G + +WG     G F        G+LG G       P  V+    +  +QV CG   +
Sbjct: 3132 EDGSVYSWG----DGDF--------GKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFS 3179

Query: 417  GALLEY 422
             AL +Y
Sbjct: 3180 LALTKY 3185



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 116/273 (42%), Gaps = 75/273 (27%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            G +Y WG N  GQLG G + AKV +P+P   E LS +   Q A G +   AVT  GKV +
Sbjct: 3894 GAIYGWGHNHRGQLG-GLEGAKVKLPLP--CESLSALRPIQLAGGEQTLFAVTADGKVYA 3950

Query: 201  WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
             G G  GRLG G   S++          P L++ ++ V +K  A                
Sbjct: 3951 TGYGALGRLGTGGVDSVM---------VPTLLESIQHVFIKKVA---------------- 3985

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                                            V  GG H   L+S G +Y+WG  ++G L
Sbjct: 3986 --------------------------------VNSGGKHCLALSSEGHVYSWGEGDDGKL 4013

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
            G G+      P+ ++       VD ++CG  H+AAIS  G + TWG G            
Sbjct: 4014 GHGNRITYDRPKLIEALLGTEIVD-IACGGHHSAAISSAGWLYTWGKG------------ 4060

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
              G+LGHG+  D + PT+V   +  K + V+CG
Sbjct: 4061 RYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG 4093



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 110/244 (45%), Gaps = 21/244 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
           G H L LT  G VY+ G  D G+LG  ++     EP  I  L  + V  I+ G  +S+AI
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCD-EPQVIEVLSDRTVTYIACGSTYSAAI 568

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           +  GEL  WG+ S G+LG G      I IPT V  L+G      A G    Q++ VT  G
Sbjct: 569 SSTGELLTWGRGSYGRLGHG--ICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSG 626

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V SWG G  G+LG G          S     P+++ +L    V     G   SA +  +
Sbjct: 627 IVFSWGDGDYGKLGRGG---------SDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677

Query: 257 GRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           G VY +G    D      GN  H R P L+  L   +  ++  G  H   +T    +Y W
Sbjct: 678 GEVYTWGKG--DHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGW 735

Query: 313 GSNE 316
           G N+
Sbjct: 736 GRND 739



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 107/237 (45%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          S S   P++I+ L    V   A G  +
Sbjct: 514 LALTTKGIVYSWGNGDGGRLGHGD---------SFSCDEPQVIEVLSDRTVTYIACGSTY 564

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA I   G +  +G  +  ++     +    P++++ L       V CG     T  +T+
Sbjct: 565 SAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTN 624

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G +++WG  + G LG G  D    P+ V     ++ V +V CG + +AA++  G++ TW
Sbjct: 625 SGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVV-KVFCGGQFSAALTAHGEVYTW 683

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G  +            +LGHGN+     P +V    N K   +S G  H  A+ E
Sbjct: 684 GKGDHY------------RLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITE 728



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 67/137 (48%), Gaps = 8/137 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  D  +
Sbjct: 631 WGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYR 690

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    E++ +   P  + GL+ K+V  +S G  H  AIT D  +Y WG+N   Q+    
Sbjct: 691 LGHGNEEHVRF---PKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPSL 747

Query: 160 KAAKVIPIPTKVECLSG 176
            A  V+  PT    LSG
Sbjct: 748 GA--VVSEPTLCPTLSG 762



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            WG+ D G+LG G+  ++  P +  A +  ++  +ACG AHTL  + T   ++
Sbjct: 4215 WGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHS 4266


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G I+    P  V+    +  V  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 161/363 (44%), Gaps = 50/363 (13%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G+++T G++  G LG  +++    P  V+   +   V Q++CG  H A + 
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLT 366

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT V    +     ++CG N T
Sbjct: 367 SRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 417 GAL 419
            A+
Sbjct: 415 AAI 417



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            R+ GP     +  VSCG  HTA I S G++ T+G G            S G LGHG+  
Sbjct: 175 RRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGDLK 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 44/343 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
           ++KA+A G  HTLFL   G V++ G N  G+LG   + E   Y++ P+ IS   + ++QI
Sbjct: 48  TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS A++ DG L+ WG NS+GQL +      +   P +V  L    T Q A G   
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V++ GGG+V  WG    GR+ H                +P  ++    V +   +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
            +  +  +G ++ +G     ++    GN   R    P  +  +     V CG  H+  LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
             G +++ GS+  G LG G      +  R       S V +++CG  HT  ++ GK+ T+
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTF 322

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G             +S GQLGHGN  + I P +++  ENV ++
Sbjct: 323 GL------------NSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
           V  +LY++G  S+GQL     +A    +++  P  V        G+  K  A G + ++ 
Sbjct: 2   VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61

Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +   GKV S G+  +G LG G  +E S          YT   +     V++   +AG  H
Sbjct: 62  LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111

Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           S  + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG 
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           ++ WG   +G        + HSP  V+  F   P+ Q+S G   T A++  G +  W   
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQISAGNLFTMALTASGTLFAW--- 220

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 419
                    G +  GQLG+  + D I+P  V    N+ + + V CG +H+ AL
Sbjct: 221 ---------GRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  +      P        +S+  + CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
           G    ++ P +   VE ++ +F
Sbjct: 333 GNTRNQITPRMIDSVENVASVF 354


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 163/343 (47%), Gaps = 44/343 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQI 128
           ++KA+A G  HTLFL   G V++ G N  G+LG   + E   Y++ P+ IS   + ++QI
Sbjct: 48  TVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEG-SYTIYPVHISNAVR-IIQI 105

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS A++ DG L+ WG NS+GQL +      +   P +V  L    T Q A G   
Sbjct: 106 SAGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISDTPKRVPSLPE--TVQVACGASH 162

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V++ GGG+V  WG    GR+ H                +P  ++    V +   +AG L
Sbjct: 163 TVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVELFVSVPIIQISAGNL 206

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGYHTCVLT 304
            +  +  +G ++ +G     ++    GN   R    P  +  +     V CG  H+  LT
Sbjct: 207 FTMALTASGTLFAWGRNEEGQL----GNFTNRDVINPREVPNINSVVVVECGDSHSIALT 262

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
             G +++ GS+  G LG G      +  R       S V +++CG  HT  ++ GK+ T+
Sbjct: 263 HEGRVFSCGSDSFGQLGCGQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTF 322

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G             +S GQLGHGN  + I P +++  ENV ++
Sbjct: 323 GL------------NSNGQLGHGNTRNQITPRMIDSVENVASV 353



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 46/293 (15%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAA----KVIPIPTKVECLS----GIFTKQAALGFEQSVA 191
           V  +LY++G  S+GQL     +A    +++  P  V        G+  K  A G + ++ 
Sbjct: 2   VRRQLYVFGCASDGQLAFRPNSAGNDAQMMLFPHLVYGAPTGQHGVTVKAVASGEKHTLF 61

Query: 192 VTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +   GKV S G+  +G LG G  +E S          YT   +     V++   +AG  H
Sbjct: 62  LANDGKVWSCGSNYNGELGRGGVKEGS----------YTIYPVHISNAVRIIQISAGRSH 111

Query: 250 SACIDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           S  + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG 
Sbjct: 112 SMAVSDDGRLFAWGSNSHGQLAMSGDILISDTPKRVPSLPETVQVACGASHTVSLNGGGR 171

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           ++ WG   +G        + HSP  V+  F   P+ Q+S G   T A++  G +  W   
Sbjct: 172 VFIWGQQSDG-------RIRHSPAEVE-LFVSVPIIQISAGNLFTMALTASGTLFAW--- 220

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 419
                    G +  GQLG+  + D I+P  V    N+ + + V CG +H+ AL
Sbjct: 221 ---------GRNEEGQLGNFTNRDVINPREV---PNINSVVVVECGDSHSIAL 261



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 13/142 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  +      P        +S+  + CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGRNEEGQLGNFTNRDVINPREVPNI--NSVVVVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPSRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIF 178
           G    ++ P +   VE ++ +F
Sbjct: 333 GNTRNQITPRMIDSVENVASVF 354


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  ++  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 D--LKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARL---------KPTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKM--LFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++  L  +G    RP L+     SE   ++ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 329 GQLGNLNSDG----RPCLVEDKIASEHVLQIACGSYHVAVLTSRSEVFTWGKGANGRLGH 384

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G I+    P  V+    +  V  ++CG   TAAI
Sbjct: 385 GDIEDRKVPTTVEA-LRDRAVRHIACGANFTAAI 417



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 161/363 (44%), Gaps = 50/363 (13%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G  H
Sbjct: 84  CGVRHASLVTRNGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG G      IP       L G+     + G   +  +
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGP-LEGLQIAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A 
Sbjct: 200 TSMGQLFTFGDGSFGVLGHGDLKSI---------SCPREVESLSGLKTIAVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG 
Sbjct: 251 IVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLKPTCVASLIDYDFYRVACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G+++T G++  G LG  +++    P  V+   +   V Q++CG  H A + 
Sbjct: 309 SLTVGLTTSGKVWTMGNSVYGQLG--NLNSDGRPCLVEDKIASEHVLQIACGSYHVAVLT 366

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT V    +     ++CG N T
Sbjct: 367 SRSEVFTWGKGAN------------GRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFT 414

Query: 417 GAL 419
            A+
Sbjct: 415 AAI 417



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            R+ GP     +  VSCG  HTA I S G++ T+G G            S G LGHG+  
Sbjct: 175 RRISGPLEGLQIAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGDLK 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 164/334 (49%), Gaps = 20/334 (5%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P   +  + + ++ +ACG  +T+ +T+ G VY+ G ND 
Sbjct: 4   WGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDH 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +  G     L ISG+      + + G  H+  +   G+L+ WG N  GQLGL +
Sbjct: 64  GQLG--QEKGRKRLQL-ISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDR 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +A  I  P  V+ L      Q A G + S+A+T  G++ +WG+   G+LG G ++ +  
Sbjct: 121 VSA-TIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSDTKM-- 177

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+L+  L  V +   A G  H+  I ++G V+ +G     ++   +  +  
Sbjct: 178 ------ELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  S      CG   +  LT  G ++T G+   G LG G+      P ++   
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIM-E 290

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
              S V Q+SCG +HT A+  S G++  WG GG+
Sbjct: 291 LMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGA 324



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 163/331 (49%), Gaps = 41/331 (12%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI     P  ++  K  E+ QI+ G +++ A+T +G++Y  G N +GQL
Sbjct: 10  GELGLGGIEDENI---FTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  +K  K + + + ++ L+    ++AA G   ++ V   G++ SWG+   G+LG  + S
Sbjct: 67  G-QEKGRKRLQLISGIDPLA---FRKAACGSSHTLVVNEWGQLFSWGSNVEGQLGLDRVS 122

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM-LFQ 273
           + +          PR++K L G K+ +  A G  HS  +  NG +Y +G  +  ++ L  
Sbjct: 123 ATIR--------EPRMVKTL-GTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGS 173

Query: 274 EGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           +     +P L+  L   P +  V CGGYHT V++  G ++ WG N  G LG+  I   + 
Sbjct: 174 DTKMELKPKLVHSLAAVPIAF-VACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNV 232

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P +++     S V   +CG + +  ++ +G + T G G              GQLGHGN 
Sbjct: 233 PCQLRT-LRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMY------------GQLGHGNK 279

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
              I P  +         Q+SCG  HT AL+
Sbjct: 280 TSEILPRQIMELMGSTVTQISCGRRHTLALV 310



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 140/298 (46%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+G+LG    + R R  + S  +  + +  ACG +HTL + E G +++ G N  GQL
Sbjct: 59  GNNDHGQLG--QEKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQL 116

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+        EP  +  L  K +VQI+ G  HS A+T +GELY WG NS+GQLGLG    
Sbjct: 117 GLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSNSDGQLGLGSD-T 175

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K+   P  V  L+ +     A G   ++ ++  G V +WG    G+LG       L  ++
Sbjct: 176 KMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLG-------LSDIQ 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L   +V  AA G   S  +  +G V+  G     ++          P 
Sbjct: 229 NRN--VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            I +L  S   ++ CG  HT  L  S G +Y WG    G LG        +P+ V GP
Sbjct: 287 QIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGP 344



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  +++R  P          +   ACG   ++FLT  G V+  G   +GQ
Sbjct: 214 WGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
           LG        L    +  +   V QIS G  H+ A+    G +Y WG    GQLG
Sbjct: 274 LGHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLG 328


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 146/323 (45%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K  A++ GG H + L+  G VY+ G  D G
Sbjct: 4052 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDG 4111

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4112 KLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4171

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4172 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4223

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4224 ---SDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4280

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   LH P  V   
Sbjct: 4281 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4339

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4340 LQGKKITRVACGSAHTLAWSTAK 4362



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 3070 GEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3129

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3130 KLGHGNCISLD-KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3188

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3189 ITQTRP--KLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRGG----- 3241

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP L+  L  + V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3242 ----SDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3297

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3298 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHD 3357

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3358 -LEDARVNRVSCGSSHSIA 3375



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 175/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G +Y+TG    G
Sbjct: 3999 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKIYSTGYGAAG 4057

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  I   LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4058 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGH 4115

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G K +     P  +E L G+     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4116 GNKVS--YDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4169

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4170 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4224

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4225 DGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4284

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TWG             +  GQLG G     
Sbjct: 4285 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG------------DNDEGQLGDGTTSAL 4331

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4332 HRPRLVHALQGKKITRVACGSAHTLA 4357



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 199/417 (47%), Gaps = 39/417 (9%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  K    +R + +  Q+    +WG  D  +LG G   S+ + PV      K 
Sbjct: 2987 FLASDWEVLQKQIAIQRSVDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPVYSETLSK- 3044

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++  
Sbjct: 3045 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNMCEPKAIPFLSQFVIKKV 3102

Query: 128  -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G 
Sbjct: 3103 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEVLKSKRIRDIACGS 3160

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A G
Sbjct: 3161 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALIGHRVVQVACG 3211

Query: 247  F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
                 +  +  +G VY +GD    K+     +    P L+ +L      +V CG   +  
Sbjct: 3212 SRDAQTMALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLA 3271

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
            LT  GE++TWG  +   LG G+   +  P  V+G      +  V+ G  H  A+++ G++
Sbjct: 3272 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQV 3330

Query: 362  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
              WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG +H+ A
Sbjct: 3331 YAWG---------DNDH---GQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIA 3375



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 160/341 (46%), Gaps = 31/341 (9%)

Query: 88   ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
            +   VY  GLND  QLG  +     L     +  K + + I+ G      ++ +G+LY  
Sbjct: 3010 QQSAVYVWGLNDKDQLGGLKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3069

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G+ +NG+LGLG      +  P  +  LS    K+ A+  G + ++A+T  GKV SWG G 
Sbjct: 3070 GEGTNGRLGLGDDNN--MCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGE 3127

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  NG +Y +G  
Sbjct: 3128 DGKLGHGNCISL---------DKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLG 3178

Query: 266  AVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLG 321
               ++   +     RP L+  L      +V CG     T  LT+ G +Y+WG  + G LG
Sbjct: 3179 EYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLG 3238

Query: 322  IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
             G  D  ++P  V    +   V QV CG + + A+++ G++ TWG G             
Sbjct: 3239 RGGSDGCYTPLLVDR-LNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYF---------- 3287

Query: 381  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3288 --RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3326



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 158/339 (46%), Gaps = 35/339 (10%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3993 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKIYS 4050

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + IPT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 4051 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG 4108

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG +          S   P+LI++L GV++   A G  HSA I   G +Y +G 
Sbjct: 4109 DDGKLGHGNK---------VSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGK 4159

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4160 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4219

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
            G G  D    P ++    +   V +V CG + + A++  G + TWG G  H         
Sbjct: 4220 GRGGSDGCKVPLKIDS-LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4269

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
               +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4270 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4305



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 155/363 (42%), Gaps = 37/363 (10%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 514 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 564

Query: 70  KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + I Y    L  + L+K ++ 
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIF 624

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++ +GELY WG+ + G+LG G      +  PT V  L G      A G  
Sbjct: 625 IACGSTYSAALSANGELYTWGRGNYGRLGHGN--FDDVMTPTLVTTLKGHTVVHVACGSG 682

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 683 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 733

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H   L
Sbjct: 734 GSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILAL 793

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           T    +Y WG N+ G +           +   GP    P    +   K    ++ G   +
Sbjct: 794 TEDQFVYGWGRNDYGQI-----------DPTLGPIISEPTLCPTLSSKTVIGLASGPTQS 842

Query: 364 WGW 366
           + W
Sbjct: 843 FAW 845



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 37/316 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C A  +  +K L C     + L+  G VY              N+ +  E   P R+
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 560

Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   + + +   +    H  A+T DG +Y WG    G+LG G   +     P  +E L 
Sbjct: 561 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTIS--YDEPKLIEALL 618

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                  A G   S A++  G++ +WG G  GRLGHG    ++         TP L+  L
Sbjct: 619 EKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVM---------TPTLVTTL 669

Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      
Sbjct: 670 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 729

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CG   +  LT+ GE+YTWG  +   LG GS + +  P+ ++    +  V  +S G  
Sbjct: 730 KVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDRKVKDLSVGTT 788

Query: 352 HTAAISEGKILTWGWG 367
           H  A++E + + +GWG
Sbjct: 789 HILALTEDQFV-YGWG 803



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 129/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G +  KV  +P   E LS +   Q A G +   AVT  GK+ S 
Sbjct: 3994 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYST 4051

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4052 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHV 4102

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4103 YSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRY 4162

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  D    P+ V+    +  V  V+CG     T  +++   + W WG        
Sbjct: 4163 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWG-------- 4212

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4213 DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 4254



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 131/286 (45%), Gaps = 31/286 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 3014 VYVWGLNDKDQLG-GLKGSK-IKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGE 3071

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G ++++           P+ I  L    +K  A  +G  H+  + ++G+V+ 
Sbjct: 3072 GTNGRLGLGDDNNMC---------EPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFS 3122

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  + S GELYTWG  E G 
Sbjct: 3123 WGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 3182

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSED 376
            LG G       P+ VQ       V QV+CG +     A  ++G + +WG     G F   
Sbjct: 3183 LGHGDTITQTRPKLVQALIGHRVV-QVACGSRDAQTMALTTDGYVYSWG----DGDF--- 3234

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
                 G+LG G       P +V+   N+  +QV CG   + AL +Y
Sbjct: 3235 -----GKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKY 3275



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 581 LALTQDGCVYSWGNGDGGRLGHGD---------TISYDEPKLIEALLEKNIIFIACGSTY 631

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 632 SAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 691

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G +++WG  + G LG G  D   +P+ V      + V +V CG + +AA++  G++ TW
Sbjct: 692 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGSQFSAALTAHGEVYTW 750

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHG++    +P ++    + K   +S G  H  AL E
Sbjct: 751 GKGDAY------------RLGHGSEEHVRYPKVIESLRDRKVKDLSVGTTHILALTE 795



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G H   LT  G +Y+WG+ + G LG G       P+ ++    E  +  ++CG  ++AA+
Sbjct: 577 GKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA-LLEKNIIFIACGSTYSAAL 635

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           S  G++ TWG G              G+LGHGN  D + PT+V   +    + V+CG
Sbjct: 636 SANGELYTWGRGNY------------GRLGHGNFDDVMTPTLVTTLKGHTVVHVACG 680



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 16/92 (17%)

Query: 331 PERVQGPFSESPVDQVSC---GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           P+RV G FS+ P+  ++    G  + A   +G + +WG G             GG+LGHG
Sbjct: 557 PQRVHG-FSDKPITMIASHADGKHYLALTQDGCVYSWGNG------------DGGRLGHG 603

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           + + Y  P ++        + ++CG  ++ AL
Sbjct: 604 DTISYDEPKLIEALLEKNIIFIACGSTYSAAL 635


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 175/386 (45%), Gaps = 41/386 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  +YG L LG   S  +      F    ++ +A G      +   G V+  GLN  GQ 
Sbjct: 470 GQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGGVFTCGLNKSGQC 529

Query: 104 G---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G     E +  +     +SG+   +V  + G  H  A+  DG ++ WG N  GQLGLG  
Sbjct: 530 GNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGST 589

Query: 161 AAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
            +K    P  ++ L   +    AA+ +  S  V+  G++L++G    G+LG  H Q    
Sbjct: 590 ISKSH-TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQH--- 645

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++TP+++  L    V  AA G  H+     +G VY FG     ++      +
Sbjct: 646 --------QHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARN 697

Query: 278 ARRPSLI-SKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            + P+L+ + L  S+E    V CG YHT  ++  G+L TWG N+ G LGIGS +  +S +
Sbjct: 698 IKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQ 757

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG---- 387
            V  P S S +   SCG  H+  + S G+++ +            G ++ GQLG G    
Sbjct: 758 FVPLPMS-SKIKNASCGCYHSLILMSNGRVMVF------------GRNNKGQLGAGARTL 804

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGF 413
           +  D   P   N   N + ++++ GF
Sbjct: 805 SSADLPLPVPSNSLANDEVVRIAAGF 830



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 159/340 (46%), Gaps = 35/340 (10%)

Query: 92  VYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +++ G N++G+L +   N    LE +     K  +  ++ G    + +  DG ++  G N
Sbjct: 466 LFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKG-IRDVAGGNEVLAVVMNDGGVFTCGLN 524

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +GQ G G    +VI I T V  LSGI      AA G E  +AV   G V SWG    G+
Sbjct: 525 KSGQCGNGTFEERVI-IATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQ 583

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LG G  S+I      +  +TPR+I  L E   +  AA  + HSA +  NG +  FG    
Sbjct: 584 LGLG--STI------SKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            ++      H   P ++  L  S +VV    CG YHT   TS GE+Y++G N+ G LG+G
Sbjct: 636 GQLGLDHTQHQHTPQVVDAL--SSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG 693

Query: 324 SIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
               + +P  V+    ES   +  VSCG+ HT  ISE GK++TWG             + 
Sbjct: 694 HARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWG------------RND 741

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            GQLG G+         V    + K    SCG  H+  L+
Sbjct: 742 YGQLGIGSKEHKNSAQFVPLPMSSKIKNASCGCYHSLILM 781



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/227 (31%), Positives = 120/227 (52%), Gaps = 18/227 (7%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  D G+LGLGS   +S    ++ S  EK+ +   A    H+  ++  G +   G+ND 
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+ ++  +   P  +  L  +VV + + G +H+ A T DGE+Y +GKN  GQLGLG 
Sbjct: 636 GQLGL-DHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGH 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             A+ I  P  V+   G   ++    + G+  +V ++  GK+++WG    G+LG G +  
Sbjct: 695 --ARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                ++++++ P  +      K+K A+ G  HS  +  NGRV +FG
Sbjct: 753 -----KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFG 790



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 27/234 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D G+LGL   + +  P V  A     +   ACG  HT+  T  G VY+ G ND+GQ
Sbjct: 630 FGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQ 689

Query: 103 LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG- 158
           LG+          L  + L    +++V +S GY+H+  I+  G+L  WG+N  GQLG+G 
Sbjct: 690 LGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGS 749

Query: 159 ---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              K +A+ +P+P   +       K A+ G   S+ +   G+V+ +G    G+LG G  +
Sbjct: 750 KEHKNSAQFVPLPMSSK------IKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGART 803

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
                L S     P     L   +V   AAGF  S         YI   R+ D 
Sbjct: 804 -----LSSADLPLPVPSNSLANDEVVRIAAGFYSS---------YILTGRSSDN 843


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 154/332 (46%), Gaps = 33/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDVGHWI-PRRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
               K I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 220 N--VKSISCPREVESLSGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G+V+  G+   
Sbjct: 278 RLGHGDKEARLN---------PTCVASLIDYDFYRVACGHSLTVGLTTSGKVWTMGNSVY 328

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     N   RP L+     +E   +V CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 329 GQL--GNPNSDGRPCLVGDKITNEHVLQVACGSYHVSVLTSRSEVFTWGKGANGRLGHGD 386

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+    P  V+    +  V  ++CG   TAAI
Sbjct: 387 IEDQKVPTLVEA-LKDRSVRHIACGANFTAAI 417



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 165/366 (45%), Gaps = 52/366 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGY 132
           + CG  H   +T +G V+  G +  G+LG    E+   S+ P  +  L    +  ++ G 
Sbjct: 82  VDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNIDFVACGE 138

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  GELY WG  ++  G LG G      IP   ++   L G+     + G   +
Sbjct: 139 FHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIP--RRISGALEGLQVAYVSCGTWHT 196

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H
Sbjct: 197 ALITSMGQLFTFGDGSFGVLGHGNVKSI---------SCPREVESLSGLKTIAVACGVWH 247

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
           +A I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 248 TAAIVEVIVTQSSATVSAGKLFTWGDG--DKHRLGHGDKEARLNPTCVASLIDYDFYRVA 305

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G+++T G++  G LG  + D    P  V    +   V QV+CG  H +
Sbjct: 306 CGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSD--GRPCLVGDKITNEHVLQVACGSYHVS 363

Query: 355 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            + S  ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG 
Sbjct: 364 VLTSRSEVFTWGKGAN------------GRLGHGDIEDQKVPTLVEALKDRSVRHIACGA 411

Query: 414 NHTGAL 419
           N T A+
Sbjct: 412 NFTAAI 417



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 103/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H++ +  +G V+ +G+ +  ++      
Sbjct: 56  VIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DVGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            R+ G      V  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 175 RRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNVK 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPREVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 146/287 (50%), Gaps = 19/287 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +        S+ +   +  LA       HTL +TE+G V++ G  D+
Sbjct: 1856 GEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFSWGDGDY 1915

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EV+Q+S G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 1916 GKLGHG-NSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGT 1974

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
               K   +PT+V  L        A G   ++ V+  G  V ++G G  G+LG G      
Sbjct: 1975 TTNK--KVPTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGN----- 2027

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +  ++ P  IK L+G  +K  A G   S  + + G+V+ +G   +       G   
Sbjct: 2028 ----TVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERLIGQPDTRGGSN 2083

Query: 279  RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             +P  ++ L   + E+VVCG  HT VLTS G+++ WGSN  G LG+G
Sbjct: 2084 CQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLG 2130



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 132/289 (45%), Gaps = 38/289 (13%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E ++WG   NGQ+  G + A V   P +V   S   ++Q   G   +  V   G VL+ G
Sbjct: 1802 EAFLWGSGRNGQMCEGGRGAFV---PVRVPSFS--CSQQIVCGQNCTFVVQNNGTVLACG 1856

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G  GRLG G  S  L  L + S     ++ +L      + + G  H+  + E+G V+ +
Sbjct: 1857 EGSYGRLGQGN-SDDLHSLTAISSIQGFVVTQL---ATSVGSDG--HTLAVTESGEVFSW 1910

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGC 319
            GD    K+     +  RRP  I  L   EEV+   CG  H+ V+T+ G+L+T+G+ + G 
Sbjct: 1911 GDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
            LG+G+      P RV        +  V+CG  HT  +S      W +G   G F      
Sbjct: 1970 LGLGTTTNKKVPTRVVA-LESHQIGYVACGLNHTLCVSADGTNVWAFGD--GDF------ 2020

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQ------VSCGFNHTGALLEY 422
              G+LG GN V    PT       +KALQ      V+CG   + AL +Y
Sbjct: 2021 --GKLGQGNTVGKHLPT------KIKALQGHVIKKVACGTQFSVALSKY 2061



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 124/248 (50%), Gaps = 15/248 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G+ + + RP    A +   +  L+CG  H+  +T  G ++  G  D+G+
Sbjct: 1910 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFGNGDYGR 1969

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGLGKK 160
            LG+       + P R+  L+  ++  ++ G +H+  ++ DG  ++ +G    G+LG G  
Sbjct: 1970 LGLGTTTNKKV-PTRVVALESHQIGYVACGLNHTLCVSADGTNVWAFGDGDFGKLGQGNT 2028

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              K   +PTK++ L G   K+ A G + SVA++  GKV +W   G  RL  GQ  +    
Sbjct: 2029 VGK--HLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTW---GQERL-IGQPDT---- 2078

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR 279
             R  S   P+ +  L G  ++    G  H+  +  +G V+ +G  +  ++ L    +  R
Sbjct: 2079 -RGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVR 2137

Query: 280  RPSLISKL 287
             P L+  L
Sbjct: 2138 EPQLVPCL 2145


>gi|91083383|ref|XP_967337.1| PREDICTED: similar to Sergef protein [Tribolium castaneum]
 gi|270006903|gb|EFA03351.1| hypothetical protein TcasGA2_TC013336 [Tribolium castaneum]
          Length = 364

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 178/374 (47%), Gaps = 38/374 (10%)

Query: 43  WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG   YG+LGLG      +  +   +  +     ++ A+A G  HTL L + G VY  G 
Sbjct: 6   WGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYCCGW 65

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG S++   +L+  +I  LK   +VQIS G+  S+A++  G+ ++WG NS  QLG
Sbjct: 66  NSKGQLGTSDD---TLKITQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSYTQLG 122

Query: 157 LGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           L  K+     IP++++    + T  KQ + G   S  +   G +L  G G  G+LG G  
Sbjct: 123 L-SKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDN 181

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                +L  +       + +LE + V I A+G  H+  + E+G VY +G+    ++    
Sbjct: 182 FDDNNYLSISK------VPDLEDI-VSI-ASGQHHTVVLKEDGTVYSWGENKYGQLGIDP 233

Query: 275 G-NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             +++  P  I        V  G  HT  L+  GE++TWG N  G LG    +V + PE+
Sbjct: 234 NISNSFVPMEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLG-AQREVTYKPEK 292

Query: 334 VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           + G      V Q+S G +H  A++ +GK+  WGW            +  G  G G+  D 
Sbjct: 293 IPGL---KDVTQLSVGSEHNLAVTKDGKLFVWGW------------NEHGSCGTGDKTDV 337

Query: 393 IHPTIVNFGENVKA 406
             PT +     VKA
Sbjct: 338 CKPTQIFANRKVKA 351



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 156/340 (45%), Gaps = 38/340 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRIS-----GLKKEVVQISTGYHHSSAITVDGELYM 146
           +Y+ G N +GQLG+       + P  ++      +   +V I+ G  H+  +  +G +Y 
Sbjct: 3   LYSWGANSYGQLGLGHKSDEEVSPKEVNLGDTDLVADNIVAIAGGAGHTLILDKNGFVYC 62

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G NS GQLG      K+    T++E L G    Q + G++ S AV+  GK   WG    
Sbjct: 63  CGWNSKGQLGTSDDTLKI----TQIEILKGFRIVQISCGWDFSAAVSECGKQFVWGNNSY 118

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            +LG  +  +  G + S  + + +L    + V     + G  HSA ++++G + + G  +
Sbjct: 119 TQLGLSKSITCTG-IPSRLQVSQKLATGFKQV-----SCGLRHSAMLNKDGGLLVAGTGS 172

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +         ISK+P  E++V    G +HT VL   G +Y+WG N+ G LGI 
Sbjct: 173 KGQLGLGDNFDDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGID 232

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            +I     P  +     ++ +  V  GW HTAA+S+ G++ TW            G +S 
Sbjct: 233 PNISNSFVPMEI---LHDANLGSVYAGWTHTAALSKSGEVFTW------------GRNSY 277

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLG   +V Y    I    +     Q+S G  H  A+ +
Sbjct: 278 GQLGAQREVTYKPEKIPGLKD---VTQLSVGSEHNLAVTK 314



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 116/237 (48%), Gaps = 14/237 (5%)

Query: 2   LGRSLTAM---TKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-WGNGDYGRLGLG-SL 56
           L +S+T     ++  + Q +  G K   C    S+ L +    L  G G  G+LGLG + 
Sbjct: 123 LSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTGSKGQLGLGDNF 182

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           +      +    +   + ++A G  HT+ L E G VY+ G N +GQLGI  NI  S  P+
Sbjct: 183 DDNNYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLGIDPNISNSFVPM 242

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            I      +  +  G+ H++A++  GE++ WG+NS GQLG  +   +V   P K+  L  
Sbjct: 243 EILH-DANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQR---EVTYKPEKIPGLKD 298

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           +   Q ++G E ++AVT  GK+  WG    G  G G ++ +    + T  +  R +K
Sbjct: 299 V--TQLSVGSEHNLAVTKDGKLFVWGWNEHGSCGTGDKTDV---CKPTQIFANRKVK 350



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 109/227 (48%), Gaps = 21/227 (9%)

Query: 42  LWGNGDYGRLGLG-SLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVYATGLN 98
           +WGN  Y +LGL  S+     P      +K +   K ++CG  H+  L + G +   G  
Sbjct: 112 VWGNNSYTQLGLSKSITCTGIPSRLQVSQKLATGFKQVSCGLRHSAMLNKDGGLLVAGTG 171

Query: 99  DFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG+ +N   +   L IS +   +++V I++G HH+  +  DG +Y WG+N  GQLG
Sbjct: 172 SKGQLGLGDNFDDN-NYLSISKVPDLEDIVSIASGQHHTVVLKEDGTVYSWGENKYGQLG 230

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +    +    +P  +E L          G+  + A++  G+V +WG    G+LG  +E +
Sbjct: 231 IDPNISNSF-VP--MEILHDANLGSVYAGWTHTAALSKSGEVFTWGRNSYGQLGAQREVT 287

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     Y P  I  L+   V   + G  H+  + ++G+++++G
Sbjct: 288 ----------YKPEKIPGLK--DVTQLSVGSEHNLAVTKDGKLFVWG 322


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 146/323 (45%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K  A++ GG H L L+  G VY+ G  D G
Sbjct: 4001 GYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGDDG 4060

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E++ I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4061 KLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4120

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4121 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4172

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4173 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4229

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   LH P  V   
Sbjct: 4230 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHA- 4288

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4289 LQGKKITRVACGSAHTLAWSTAK 4311



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 152/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3078

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N+    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3079 KLGHGNNMSLD-KPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3137

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3138 VTQA--RPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 3190

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP +++ L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3191 ----SDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3246

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3247 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVH- 3305

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3306 ELEDARVNRVSCGSSHSIA 3324



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 175/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G VY+TG    G
Sbjct: 3948 WGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 4006

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  I   LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4007 RLGIGGTDSVMIPTLLESIQHVFIKK--VAVSSGGKHCLALSSEGHVYSWGEGDDGKLGH 4064

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G K +     P  +E L G+     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4065 GNKMS--YDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4118

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4119 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4173

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4174 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4233

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TWG             +  GQLG G     
Sbjct: 4234 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG------------DNDEGQLGDGTTSAL 4280

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4281 HRPRLVHALQGKKITRVACGSAHTLA 4306



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 164/354 (46%), Gaps = 57/354 (16%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S        
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQ------- 3011

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG       P P  +  LS    K+ A+  G + ++A+T  
Sbjct: 3012 ---EGKLYACGEGTNGRLGLGDDNNVCEPKP--IPFLSQFVIKKVAVHSGGKHALALTQD 3066

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  
Sbjct: 3067 GKVFSWGEGEDGKLGHGNNMSL---------DKPKLIETLKSKRIRDIACGSGHSAAIAS 3117

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYT 311
            NG +Y +G     ++   +     RP L+  L      +V CG     T  LT+ G +Y+
Sbjct: 3118 NGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYS 3177

Query: 312  WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
            WG  + G LG G  D  ++P   ER+ G      V QV CG + + A+++ G++ TWG G
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNG----LGVVQVECGAQFSLALTKYGEVWTWGKG 3233

Query: 368  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                           +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3234 DYF------------RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 200/418 (47%), Gaps = 40/418 (9%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAA-LWGNGDYGRLGLGSLESRWR-PVVCSAFEK 70
            +L  D ++  +    +R I +T  +  A  +WG  D  +LG G   S+ + PV      K
Sbjct: 2935 FLASDWEVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSK 2993

Query: 71   HSLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ- 127
              LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++ 
Sbjct: 2994 --LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKPIPFLSQFVIKK 3050

Query: 128  --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G
Sbjct: 3051 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMS--LDKPKLIETLKSKRIRDIACG 3108

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
               S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A 
Sbjct: 3109 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TVTQARPKLVQTLVGHRVVQVAC 3159

Query: 246  GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTC 301
            G     +  +  +G VY +GD    K+     +    P ++ +L      +V CG   + 
Sbjct: 3160 GSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSL 3219

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
             LT  GE++TWG  +   LG G+   +  P  V+G      +  V+ G  H  A+++ G+
Sbjct: 3220 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQ 3278

Query: 361  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            +  WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG +H+ A
Sbjct: 3279 VYAWG---------DNDH---GQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIA 3324



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 144/315 (45%), Gaps = 26/315 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 455 TPFYCDAIAELGIKQLCCT-------ERALMILSLNGNVYNMYHGS-ETQY-PQRVHGFS 505

Query: 70  KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + + Y    L  + L+K +V 
Sbjct: 506 DKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVF 565

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++V GELY WG+ + G+LG G      + IPT V  L G      A G  
Sbjct: 566 IACGSTYSAALSVSGELYTWGRGNYGRLGHGN--FDDVMIPTLVTTLKGHTVVHVACGSG 623

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 624 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 674

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H  VL
Sbjct: 675 GSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVL 734

Query: 304 TSGGELYTWGSNENG 318
           T    +Y WG N+ G
Sbjct: 735 TEDQFVYGWGRNDYG 749



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 160/339 (47%), Gaps = 35/339 (10%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3942 SGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3999

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + IPT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 4000 TGYGAAGRLGIG--GTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEG 4057

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG +   + + R      P+LI++L GV++   A G  HSA I   G +Y +G 
Sbjct: 4058 DDGKLGHGNK---MSYDR------PKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGK 4108

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4109 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4168

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
            G G  D    P ++    +   V +V CG + + A++  G + TWG G  H         
Sbjct: 4169 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4218

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
               +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4219 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4254



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 129/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G +  KV  +P   E LS +   Q A G +   AVT  GKV S 
Sbjct: 3943 GAIYGWGHNHRGQLG-GLEGPKV-KLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 4000

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 4001 GYGAAGRLGIGGTDSVM---------IPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHV 4051

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4052 YSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRY 4111

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  D    P+ V+    +  V  V+CG     T  +++   + W WG        
Sbjct: 4112 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWG-------- 4161

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4162 DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4203



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 141/317 (44%), Gaps = 39/317 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C A  +  +K L C     + L+  G VY              N+ +  E   P R+
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVY--------------NMYHGSETQYPQRV 501

Query: 119 SGLKKEVVQI----STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            G   ++V +    S G HH  A+T DG +Y WG    G+LG G   +     P  +E L
Sbjct: 502 HGFSDKLVTMIASHSDGKHHL-ALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIEAL 558

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                   A G   S A++  G++ +WG G  GRLGHG    ++          P L+  
Sbjct: 559 LEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVM---------IPTLVTT 609

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL     
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   +  LT+ GE+YTWG  +   LG GS + +  P+ ++    +  +  +S G 
Sbjct: 670 VKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIES-LRDKKIKDLSVGA 728

Query: 351 KHTAAISEGKILTWGWG 367
            H   ++E + + +GWG
Sbjct: 729 THILVLTEDQFV-YGWG 744



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 136/308 (44%), Gaps = 33/308 (10%)

Query: 124  EVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            EV+Q       S   T   E  +Y+WG N   QLG G K +K I +P   E LS +    
Sbjct: 2941 EVLQEQVAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPIH 2998

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G +    V+  GK+ + G G +GRLG G ++++           P+ I  L    +K
Sbjct: 2999 IAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC---------EPKPIPFLSQFVIK 3049

Query: 242  IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
              A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG 
Sbjct: 3050 KVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGS 3109

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---A 354
             H+  + S GELYTWG  E G LG G       P+ VQ       V QV+CG +     A
Sbjct: 3110 GHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVV-QVACGSRDAQTMA 3168

Query: 355  AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
              ++G + +WG     G F        G+LG G       P +V     +  +QV CG  
Sbjct: 3169 LTTDGCVYSWG----DGDF--------GKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQ 3216

Query: 415  HTGALLEY 422
             + AL +Y
Sbjct: 3217 FSLALTKY 3224



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ +    P + +  + H++  +ACG   + TL +T +G V++ G  D+
Sbjct: 585 WGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 644

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G     +    L   VV++  G   S+A+T  GE+Y WGK    +LG G +
Sbjct: 645 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSE 704

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P  +E L     K  ++G    + +T    V  W     GR  +GQ    LG 
Sbjct: 705 --EHVRYPKIIESLRDKKIKDLSVGATHILVLTEDQFVYGW-----GRNDYGQIDPTLGS 757

Query: 221 LRSTSEYTPRL 231
           + S     P L
Sbjct: 758 VISEPTLCPTL 768



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 109/237 (45%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIEALLEKNIVFIACGSTY 572

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 573 SAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTA 632

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G +++WG  + G LG G  D   +P+ V      + V +V CG + +AA++  G++ TW
Sbjct: 633 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGSQFSAALTAHGEVYTW 691

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHG++    +P I+    + K   +S G  H   L E
Sbjct: 692 GKGDTY------------RLGHGSEEHVRYPKIIESLRDKKIKDLSVGATHILVLTE 736


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 518

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 PT V         QV+CG   T AL
Sbjct: 519 KDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVPREVESLK 468

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 469 GLRTVRAACGVWHTAAVVEVM 489


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 173/364 (47%), Gaps = 34/364 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G  G  S        P       + S+K +ACGG H++FL E G VY  G+N  
Sbjct: 63  WGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTK 122

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E  G   +P +I  L  + ++ ++ G  HS A++  G L+ WG  S+GQLGL  
Sbjct: 123 GQLG-HEKEGS--KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTT 179

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               V  +P  ++ L+     Q + G    +A+   G+  +WG    G+LG G+E     
Sbjct: 180 TEDSVA-VPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFP--- 235

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                S+ +P+ +K L+G+ +   AAG  HS  +  +G V+ +G     ++   +     
Sbjct: 236 -----SQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRE 290

Query: 280 RPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  + KL  +++VV   CG  HT VLT  G ++T+G+   G LG  S +   +P RV  
Sbjct: 291 SPCHV-KLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLE 349

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V Q++CG +HT A   S G I  +G G              GQLG G+  +   
Sbjct: 350 -LMGSEVSQIACGRQHTLAFVPSSGLIYAFGCG------------IKGQLGSGHTCNLKC 396

Query: 395 PTIV 398
           P+ V
Sbjct: 397 PSPV 400



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 140/298 (46%), Gaps = 16/298 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    A     +  +ACG +H+L L++ G +++ G    GQLG++        P  I  
Sbjct: 133 KPEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLGLTTTEDSVAVPRLIKK 192

Query: 121 LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L +E++ Q+S G  H  A+  DG+ + WG+NS+GQLGLGK+       P +V+ L GI  
Sbjct: 193 LNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQAS-PQRVKSLDGIPL 251

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G V  WG   SG+LG   E             +P  +K L   K
Sbjct: 252 AQVAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQ---------DRESPCHVKLLRTQK 302

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           V   + G  H+A + + G V+ FG  +  ++     N    P  + +L  SE  ++ CG 
Sbjct: 303 VVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGR 362

Query: 298 YHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS--ESPVDQVSCGWKH 352
            HT     S G +Y +G    G LG G    L  P  V+G ++    PV + +   KH
Sbjct: 363 QHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKH 420



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 156/330 (47%), Gaps = 37/330 (11%)

Query: 100 FGQLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           FG  G S  +   +   R SG   ++ V +++ G +HS  +  DGE+Y  G N+ GQLG 
Sbjct: 68  FGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH 127

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            K+ +K    P ++  L+       A G   S+A++  G++ SWGAG  G+LG       
Sbjct: 128 EKEGSK----PEQIGALADQHIIHVACGESHSLALSDQGRLFSWGAGSDGQLG------- 176

Query: 218 LGFLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----L 271
              L +T +    PRLIK+L    +   + G  H   +  +G+ + +G  +  ++     
Sbjct: 177 ---LTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKE 233

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F      +R   +  +P ++ V  GG H+  L+  G ++ WG N +G LG+       SP
Sbjct: 234 FPSQASPQRVKSLDGIPLAQ-VAAGGAHSFALSLSGAVFGWGKNTSGQLGLSDEQDRESP 292

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V+   ++  V  +SCG  HTA +++ G + T+G G            S GQLGH +  
Sbjct: 293 CHVKLLRTQKVV-YISCGSDHTAVLTKTGGVFTFGAG------------SCGQLGHDSFN 339

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           D ++P  V      +  Q++CG  HT A +
Sbjct: 340 DEVNPRRVLELMGSEVSQIACGRQHTLAFV 369



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 119/282 (42%), Gaps = 29/282 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++  WG  S G  G       +I  P     +     K+ A G   S+ +   G+V + G
Sbjct: 59  KMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVYTCG 118

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
               G+LGH +E S            P  I  L    +   A G  HS  + + GR++ +
Sbjct: 119 VNTKGQLGHEKEGS-----------KPEQIGALADQHIIHVACGESHSLALSDQGRLFSW 167

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G  +  ++ L    +    P LI KL      +V CG +H   L + G+ + WG N +G 
Sbjct: 168 GAGSDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALAADGQFFAWGQNSHGQ 227

Query: 320 LGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           LG+G       SP+RV+      P+ QV+ G  H+ A+S  G +  W            G
Sbjct: 228 LGLGKEFPSQASPQRVKS-LDGIPLAQVAAGGAHSFALSLSGAVFGW------------G 274

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++ GQLG  ++ D   P  V      K + +SCG +HT  L
Sbjct: 275 KNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVL 316



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/130 (33%), Positives = 59/130 (45%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL   + R  P          +  ++CG  HT  LT+TG V+  G    GQ
Sbjct: 273 WGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQ 332

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA-ITVDGELYMWGKNSNGQLGLGKK 160
           LG  ++    + P R+  L   EV QI+ G  H+ A +   G +Y +G    GQLG G  
Sbjct: 333 LG-HDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHT 391

Query: 161 AAKVIPIPTK 170
                P P K
Sbjct: 392 CNLKCPSPVK 401


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 178/388 (45%), Gaps = 43/388 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P + S     S+  LACGGAH + LT  G V+  G    GQ
Sbjct: 20  WGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + +  +L P  +S     V+ Q + G+ HS  ++  G ++  G  S GQLG G   
Sbjct: 80  LGHGDILNITL-PKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTL 138

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  +  P KV   +    K  A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 139 S--LSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSD------- 189

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P ++  L+ V+V   +A   HSA I  +G+ + +G        F  G     P
Sbjct: 190 RIKSVNLPCVVSGLKDVEVVRISANGDHSAAISADGQFFSWGRG------FCGGPDVHAP 243

Query: 282 -SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQ 335
            SL S L +  EV  G  H  +LT  GE++  GS      E   L I S + L   E+V 
Sbjct: 244 QSLPSPLSF-REVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALF--EKVP 300

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
             F    V Q++ G +H+AA++E G++ TWGWG              GQLG GN  D   
Sbjct: 301 -DFDGVKVMQIAAGAEHSAAVTENGEVKTWGWG------------EHGQLGLGNTNDQTS 347

Query: 395 PTIVNFGE---NVKALQVSCGFNHTGAL 419
           P +V+ G      K ++V CG   T A+
Sbjct: 348 PELVSLGSIDLRTKEIKVYCGSGFTYAV 375



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 17/230 (7%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +++ WG  ++GQLG  K   +++P    +  L  I     A G    +A+T GGKV +WG
Sbjct: 16  QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSGGKVFTWG 73

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G SG+LGHG   +I           P+L+   +   +  AAAG+ HS  + ++G ++  
Sbjct: 74  RGSSGQLGHGDILNI---------TLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTC 124

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G+ +  ++   +      P+ +S       + V CG  H+ VL +G ++  +GS + G L
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQL 184

Query: 321 GIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           G  S  I  ++ P  V G   +  V ++S    H+AAIS +G+  +WG G
Sbjct: 185 GFSSDRIKSVNLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRG 233


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 164/332 (49%), Gaps = 26/332 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  YG LGLG +E      P      +  +++ +ACG  HT+ +T+ G V++ G ND 
Sbjct: 31  WGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVFSCGNNDS 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   +  Q + G  HS A+   G+L+ WG N++GQLGLG 
Sbjct: 91  GQLG-HEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGT 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +   P  V+ L      Q A G + ++A+T  G++ +WG+   G+LG GQ+  I  
Sbjct: 148 PLT-IAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKI-- 204

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+LI  L  + +   A G  HS  + ++G V+ +G     ++   + +   
Sbjct: 205 ------ETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKY 258

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P L+  L  +  + V CG   +  LT  G ++T G+   G LG G+    +S E +   
Sbjct: 259 VPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGA----NSNEILPRQ 314

Query: 338 FSE---SPVDQVSCGWKHTAAI--SEGKILTW 364
             E   S V Q+SCG +HT A+  S GK+  W
Sbjct: 315 IIELMGSVVTQISCGKRHTLALVPSRGKVYAW 346



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 164/340 (48%), Gaps = 41/340 (12%)

Query: 92  VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
           +Y  G   +G+LG+     ENI   L P  +   K   V QI+ G  H+  IT DGE++ 
Sbjct: 28  MYCWGSTVYGELGLGGIEDENI---LMPRELDFQKATAVEQIACGETHTVLITKDGEVFS 84

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G N +GQLG  K   ++  IP     L     KQAA G   SVAV   G++  WG+   
Sbjct: 85  CGNNDSGQLGHEKPTKRLQMIPG----LDAFIFKQAACGASHSVAVNNWGQLFCWGSNAD 140

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   +I         +TPR++K L    V   A G  H+  +  NG +Y +G  +
Sbjct: 141 GQLGLGTPLTI--------AHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNS 192

Query: 267 VDKM-LFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++ L Q+     RP LI+    +P +  + CGGYH+ V++  G ++ WG N  G LG+
Sbjct: 193 DGQLGLGQDVKIETRPKLITGLATIPIAF-IACGGYHSIVVSKSGAVFGWGRNTFGQLGM 251

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
             I   + P  ++     + V  V+CG + +  ++ +G + T G G              
Sbjct: 252 NDISDKYVPCLLKT-LRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMY------------ 298

Query: 382 GQLGHGNDVDYIHP-TIVNFGENVKALQVSCGFNHTGALL 420
           GQLGHG + + I P  I+    +V   Q+SCG  HT AL+
Sbjct: 299 GQLGHGANSNEILPRQIIELMGSV-VTQISCGKRHTLALV 337



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 27/298 (9%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           S  K+  ++  T +     I  D  +Y WG    G+LGLG    + I +P +++      
Sbjct: 3   SAPKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATA 62

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +Q A G   +V +T  G+V S G   SG+LGH + +  L           ++I  L+  
Sbjct: 63  VEQIACGETHTVLITKDGEVFSCGNNDSGQLGHEKPTKRL-----------QMIPGLDAF 111

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVC 295
             K AA G  HS  ++  G+++ +G  A  ++ L      A  P ++  L  S   ++ C
Sbjct: 112 IFKQAACGASHSVAVNNWGQLFCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIAC 171

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G  HT  LT+ GELY WGSN +G LG+G  + +   P+ + G  +  P+  ++CG  H+ 
Sbjct: 172 GKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETRPKLITG-LATIPIAFIACGGYHSI 230

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            +S+   + +GWG    TF        GQLG  +  D   P ++    N K   V+CG
Sbjct: 231 VVSKSGAV-FGWG--RNTF--------GQLGMNDISDKYVPCLLKTLRNAKVKYVACG 277



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 141/300 (47%), Gaps = 16/300 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D G+LG      R + +     +    K  ACG +H++ +   G ++  G N  GQL
Sbjct: 86  GNNDSGQLGHEKPTKRLQMI--PGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+   +  +  P  +  L    VVQI+ G  H+ A+T +GELY WG NS+GQLGLG+   
Sbjct: 144 GLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDV- 202

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K+   P  +  L+ I     A G   S+ V+  G V  WG    G+LG    S       
Sbjct: 203 KIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQLGMNDISD------ 256

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
              +Y P L+K L   KVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 257 ---KYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPR 313

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            I +L  S   ++ CG  HT  L  S G++Y WG   +G LG  +   + +P+ V GP+S
Sbjct: 314 QIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVLGPWS 373


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 139/285 (48%), Gaps = 20/285 (7%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
           GG H L L+  G VY+ G  D G+LG   N      P  I  L+ KEVV ++ G  HS+ 
Sbjct: 676 GGKHCLALSAEGEVYSWGEGDDGKLGHG-NKSSCERPRVIESLRGKEVVDVACGGAHSAC 734

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT  GELY WGK   G+LG G    ++ P   KVE LSG   +  A G    Q++ VT  
Sbjct: 735 ITASGELYTWGKGRYGRLGHGDSDDQLRP--KKVEALSGWRVRCVACGSGDAQTLCVTDD 792

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
             V SWG G  G+LG G          S     P  +  L+G+ V     G   S  +  
Sbjct: 793 DCVWSWGDGDYGKLGRGG---------SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTA 843

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW 312
           +G VY +G     ++     +H RRP  ++ L   ++V+C   G  H    T  GE+YTW
Sbjct: 844 SGSVYTWGKGDYHRLGHGTDDHVRRPKRVAAL-QGKKVICIAVGSLHCVACTDTGEVYTW 902

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           G N+ G LG G+++ +H P R+        +++VSCG  HT A S
Sbjct: 903 GDNDEGQLGDGTVNAIHKP-RLVAALQGKKINRVSCGSAHTVAWS 946



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 182/388 (46%), Gaps = 41/388 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P+ C A    +L+ +   GG  TLF +T  G VYATG    
Sbjct: 586 WGHNHRGQLGGVEGAKVKLPMPCEALS--ALRPIQVVGGEQTLFAVTADGKVYATGYGAG 643

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE L+   +KK VV  ++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 644 GRLGIGGTDSVSCPTLLESLQHVFIKKVVV--NSGGKHCLALSAEGEVYSWGEGDDGKLG 701

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G K++     P  +E L G      A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 702 HGNKSS--CERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGD--- 756

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+ ++ L G +V+  A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 757 ------SDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGG 810

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  +  L       V CG   +  LT+ G +YTWG  +   LG G+ D +  P+
Sbjct: 811 SDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPK 870

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           RV        V  ++ G  H  A ++ G++ TWG             +  GQLG G  V+
Sbjct: 871 RVAA-LQGKKVICIAVGSLHCVACTDTGEVYTWG------------DNDEGQLGDGT-VN 916

Query: 392 YIH-PTIVNFGENVKALQVSCGFNHTGA 418
            IH P +V   +  K  +VSCG  HT A
Sbjct: 917 AIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 148/338 (43%), Gaps = 33/338 (9%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
           +G +   G N  GQLG  E     L P+    L     +Q+  G     A+T DG++Y  
Sbjct: 580 SGTILGWGHNHRGQLGGVEGAKVKL-PMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
           G  + G+  LG      +  PT +E L  +F K+  +  G +  +A++  G+V SWG G 
Sbjct: 639 GYGAGGR--LGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGD 696

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG +SS            PR+I+ L G +V   A G  HSACI  +G +Y +G  
Sbjct: 697 DGKLGHGNKSSC---------ERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKG 747

Query: 266 AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
              ++   + +   RP  +  L       V CG     T  +T    +++WG  + G LG
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLG 807

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            G  D    P RV        V +V CG + + A++  G + TWG G  H          
Sbjct: 808 RGGSDGCKVPLRVDL-LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYH---------- 856

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 857 --RLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVA 892



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 129/284 (45%), Gaps = 29/284 (10%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +  WG N  GQLG G + AKV  +P   E LS +   Q   G +   AVT  GKV + 
Sbjct: 581 GTILGWGHNHRGQLG-GVEGAKV-KLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYAT 638

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRV 259
           G G  GRLG G   S+           P L++ L+ V +K  +  +G  H   +   G V
Sbjct: 639 GYGAGGRLGIGGTDSV---------SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEV 689

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           Y +G+    K+     +   RP +I  L   E  +V CGG H+  +T+ GELYTWG    
Sbjct: 690 YSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYTWGKGRY 749

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
           G LG G  D    P++V+   S   V  V+CG     T  +++   + W WG        
Sbjct: 750 GRLGHGDSDDQLRPKKVEA-LSGWRVRCVACGSGDAQTLCVTDDDCV-WSWG-------- 799

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           DG    G+LG G       P  V+  + +  ++V CG   + AL
Sbjct: 800 DGDY--GKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVAL 841


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 165/350 (47%), Gaps = 24/350 (6%)

Query: 19  KLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC 78
           +LG+    C  + S     +   +WG GD GRLG+ +  ++++P V    ++  ++  + 
Sbjct: 85  RLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--VQMASA 142

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           GG H + LTE G VY  G   FG LG        L  L     K  +V +S G  H++A+
Sbjct: 143 GGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAV 202

Query: 139 TVDGELYMWGKNS-NGQLGLGKKAAK---VIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           T  GELY WG++   G+LG G         +  PTKV+ L          GF  ++A+T 
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFF-TMALTK 261

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ SWG   +  LGHG  +         + + P+++  LE V +   A G  H+A + 
Sbjct: 262 SGQLWSWGGNANHELGHGTRA---------NNWKPKVVAALEDVTLVQVACGGFHAAALT 312

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTW 312
           ++G+V  +G     ++      + + P+++  +       + CG   T  +T  G+LYTW
Sbjct: 313 QDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTW 372

Query: 313 GSNENGCLGI-GSIDVLHSPERVQGP---FSESPVDQ--VSCGWKHTAAI 356
           G N +  LGI G  D    P  VQ P     ++PV+   VSCG  H   I
Sbjct: 373 GKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCI 422



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 180/405 (44%), Gaps = 58/405 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA------------------CGGAHTL 84
           WG G +G++G GS ++   PV+ S  +  +   +A                  CG  H++
Sbjct: 40  WGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGLFHSV 99

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
              E   V+  G  D G+LGI        +P  ++   K V   S G  H+ A+T  G +
Sbjct: 100 LFAEQD-VFVWGKGDGGRLGIDTEFN-QYKPY-VNPRIKRVQMASAGGLHNIALTEVGNV 156

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           Y WG  + G LG G    +++P       L G +  +    + G   + AVT  G++ +W
Sbjct: 157 YTWGYGAFGALGHGSYERELLP-----RLLEGPWKDRIVHVSAGGSHTAAVTESGELYTW 211

Query: 202 GAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           G   G GRLGHG        +   +   P  ++ L+ V + +   G   +  + ++G+++
Sbjct: 212 GRDEGEGRLGHGNPD----IMDEGALSRPTKVQALD-VPIALVYCGGFFTMALTKSGQLW 266

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G  A  ++      +  +P +++ L      +V CGG+H   LT  G++ TWG   NG
Sbjct: 267 SWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNG 326

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
            LG G+++    P  V+   ++     ++CG   TAAI+E G + TWG    +       
Sbjct: 327 QLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLYTWGKNRDY------- 378

Query: 378 HSSGGQLG-HGNDVDYIHPTIVNFGE------NVKALQVSCGFNH 415
                QLG  G   + + P +V F +       V+ L VSCG NH
Sbjct: 379 -----QLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANH 418



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 55/314 (17%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI---PTKVECLSGIFTKQAALGFEQ--- 188
           SS    + E++ WG+ ++GQ+G G +  + +P+     K+   +G+   Q  +  +    
Sbjct: 28  SSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLG 87

Query: 189 SVAVTGG---------GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +V VT G           V  WG G  GRLG   E          ++Y P +   ++  +
Sbjct: 88  NVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTE---------FNQYKPYVNPRIK--R 136

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVV-- 294
           V++A+AG LH+  + E G VY +G  A   +    G+ +    L+ +L   P+ + +V  
Sbjct: 137 VQMASAGGLHNIALTEVGNVYTWGYGAFGAL----GHGSYERELLPRLLEGPWKDRIVHV 192

Query: 295 -CGGYHTCVLTSGGELYTWGSNE-NGCLGIGSIDV-----LHSPERVQGPFSESPVDQVS 347
             GG HT  +T  GELYTWG +E  G LG G+ D+     L  P +VQ    + P+  V 
Sbjct: 193 SAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA--LDVPIALVY 250

Query: 348 CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           CG   T A+++   L W WGG+          +  +LGHG   +   P +V   E+V  +
Sbjct: 251 CGGFFTMALTKSGQL-WSWGGN----------ANHELGHGTRANNWKPKVVAALEDVTLV 299

Query: 408 QVSCGFNHTGALLE 421
           QV+CG  H  AL +
Sbjct: 300 QVACGGFHAAALTQ 313


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  + ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 102 WGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNA 161

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG      V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 162 GLLGHGSNVSHWI-PKRVSGPLDGLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 220

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
            +A+     P +VE L G+ T   + G   + AV            GK+ +WG G   RL
Sbjct: 221 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 278

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  I  L       AA G   +  +  +G ++  G  +V  
Sbjct: 279 GHGDRSSKL---------KPTCIPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-SVYG 328

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 329 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIA 388

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
               P  V+    +  V +V+CG   TAAI + K
Sbjct: 389 DRKVPTLVEA-LRDRSVKRVACGSSFTAAICQHK 421



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 19/207 (9%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P+ ++    + V   A G  H+A +     V+ +G+    ++    G +  +P 
Sbjct: 63  TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPR 122

Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
           L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +V H  P+RV GP
Sbjct: 123 LVESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 181

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               PV  VSCG  HTA I S G++ T+G     GTF        G LGHGN     +P 
Sbjct: 182 LDGLPVSTVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNRASCSYPK 229

Query: 397 IVNFGENVKALQVSCGFNHTGALLEYV 423
            V   + ++ + VSCG  HT A++E +
Sbjct: 230 EVESLKGLRTISVSCGVWHTAAVVEVI 256



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 172/367 (46%), Gaps = 49/367 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T    V+  G    G+LG     N+    +P  +  L    V+ I+ G 
Sbjct: 83  VACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNV---FQPRLVESLSICNVELIACGE 139

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   +
Sbjct: 140 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLDGLPVSTVSCGTWHT 197

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG         R++  Y P+ ++ L+G++    + G  H
Sbjct: 198 ALITSSGQLYTFGDGTFGVLGHGN--------RASCSY-PKEVESLKGLRTISVSCGVWH 248

Query: 250 SACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
           +A + E         +G+++ +GD   DK     G+ + +  P+ I  L  Y+  +  CG
Sbjct: 249 TAAVVEVIISQSNASSGKLFTWGDG--DKYRLGHGDRSSKLKPTCIPSLIDYNFHKAACG 306

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G ++T GS+  G LG  + D  + P  V+       V +V+CG  H A +
Sbjct: 307 HTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRY-PRLVEEQLGGGGVVEVACGSYHVAVL 365

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +  G++ TWG G +            G+LGHG+  D   PT+V    +    +V+CG + 
Sbjct: 366 TNAGEVYTWGKGAN------------GRLGHGDIADRKVPTLVEALRDRSVKRVACGSSF 413

Query: 416 TGALLEY 422
           T A+ ++
Sbjct: 414 TAAICQH 420



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 47/299 (15%)

Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  + A        + +P  +E    +     A G + +  VT
Sbjct: 35  GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 94

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +++         + PRL++ L    V++ A G  H+  +
Sbjct: 95  RQSEVFTWGEECSGRLGHGTGTNV---------FQPRLVESLSICNVELIACGEFHTCAV 145

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S     LP S  V CG +HT ++TS G
Sbjct: 146 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-TVSCGTWHTALITSSG 204

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +LYT+G    G LG G+      P+ V+       +  VSCG  HTAA+ E         
Sbjct: 205 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIISQSNAS 263

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            GK+ TWG G  +            +LGHG+    + PT +    +    + +CG   T
Sbjct: 264 SGKLFTWGDGDKY------------RLGHGDRSSKLKPTCIPSLIDYNFHKAACGHTLT 310


>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
 gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
           lactis 154]
          Length = 1286

 Score =  130 bits (326), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 112/356 (31%), Positives = 165/356 (46%), Gaps = 34/356 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      + +  +  G   T+ L   G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGNGTWSARTTPVMAKGL--NHVIDVHTGVRSTMALRSDGTVWTWGSNENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI      ++ P ++SGL   + V    GY HS A++ DG ++ WGKN NG+LG G   
Sbjct: 115 LGIGTVTDMNV-PGQVSGLSGIKAVSGGLGY-HSMALSEDGSVWTWGKNDNGELGNGTTL 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+  +V  L+ + T  AA G+  S+A+   G V +WG  G G LG G         
Sbjct: 173 QQNTPV--QVAGLNDV-TAIAAGGY-FSLALKSDGTVWAWGVNGDGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  Y P  +  L    V   AAG  HS  + ++G V+ +G      +      +  RP
Sbjct: 221 -TTDRYVPVQVAGL--TDVMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             I  L +   V  GGYH+  L   G +++WG N    LG+GS      P  V G     
Sbjct: 278 VQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGI---E 334

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
            V +++ G  H+ A+ +   + WGW          G + GGQLG G       PT+
Sbjct: 335 HVREIAAGGFHSVAMKKDGTV-WGW----------GFNGGGQLGDGTSSTRDTPTL 379



 Score =  125 bits (313), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 92/323 (28%), Positives = 156/323 (48%), Gaps = 20/323 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           WG+ + G+LG+G++     P   S      +KA++ G G H++ L+E G V+  G ND G
Sbjct: 107 WGSNENGQLGIGTVTDMNVPGQVSGLS--GIKAVSGGLGYHSMALSEDGSVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    +  +  P++++GL  +V  I+ G + S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTLQQN-TPVQVAGLN-DVTAIAAGGYFSLALKSDGTVWAWGVNGDGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+AVT  G V +WG    G LG G         
Sbjct: 223 DRYVPV--QVAGLTDVMA--IAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  IK L+ + V +A  G+ HS  +D  G V+ +GD +  ++       +  P
Sbjct: 272 --TNRTRPVQIKNLQHI-VAVAGGGY-HSLALDRTGNVWSWGDNSQRQLGVGSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S + +  E+  GG+H+  +   G ++ WG N  G LG G+     +P   +     +
Sbjct: 328 VPVSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGTSSTRDTPTLTKAVLDTT 387

Query: 342 PVDQVSCGWKHTAAISEGKILTW 364
           P D  S      +  ++   L W
Sbjct: 388 PPDPGSGTLNPDSITTDSVALQW 410



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 22/233 (9%)

Query: 43  WG-NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG NGD G LG G+   R+ PV  +      + A+A GG+H+L +T+ G V+A G N +G
Sbjct: 208 WGVNGD-GELGDGTTTDRYVPVQVAGLT--DVMAIAAGGSHSLAVTQDGTVWAWGKNTYG 264

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG       +  P++I  L + +V ++ G +HS A+   G ++ WG NS  QLG+G  A
Sbjct: 265 TLGDGTRTNRT-RPVQIKNL-QHIVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNA 322

Query: 162 AKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +IP+P     +SGI   ++ A G   SVA+   G V  WG  G G+LG G        
Sbjct: 323 SSLIPVP-----VSGIEHVREIAAGGFHSVAMKKDGTVWGWGFNGGGQLGDGT------- 370

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
             S++  TP L K +         +G L+   I  +  V +   +AVD M  Q
Sbjct: 371 --SSTRDTPTLTKAVLDTTPPDPGSGTLNPDSITTDS-VALQWPKAVDNMTEQ 420



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 30/293 (10%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           ++  GY+H++++   GE+Y WG    GQLG G  +A+  P+  K   L+ +       G 
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGNGTWSARTTPVMAK--GLNHVIDVHT--GV 92

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             ++A+   G V +WG+  +G+LG G           T    P  +  L G+K      G
Sbjct: 93  RSTMALRSDGTVWTWGSNENGQLGIGT---------VTDMNVPGQVSGLSGIKAVSGGLG 143

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
           + HS  + E+G V+ +G     ++          P  ++ L     +  GGY +  L S 
Sbjct: 144 Y-HSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLNDVTAIAAGGYFSLALKSD 202

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G ++ WG N +G LG G+    + P +V G    + V  ++ G  H+ A+++   + W W
Sbjct: 203 GTVWAWGVNGDGELGDGTTTDRYVPVQVAG---LTDVMAIAAGGSHSLAVTQDGTV-WAW 258

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                     G ++ G LG G   +   P  +   +++ A  V+ G  H+ AL
Sbjct: 259 ----------GKNTYGTLGDGTRTNRTRPVQIKNLQHIVA--VAGGGYHSLAL 299


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 153/301 (50%), Gaps = 17/301 (5%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  + SL ++ RP + +A E + +    CG AH+L LT  G VY+ G N  G
Sbjct: 372 GNNDHGQLGHDVESLPNK-RPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGSNAVG 430

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   +    + P  I  +  K+VVQI+ G++H  A+T  GELY WG N+ GQLGLG  
Sbjct: 431 QLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMT 490

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV   PT V+ L+G+     A G   S AV+  G +  WG    G+LG    +     
Sbjct: 491 NEKV-STPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN----- 544

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  ++ L  + V+  + G   S  +   G V+  G     ++     N+   
Sbjct: 545 ----SRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEIL 600

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S+  ++ CG  HT     S G++Y +G +  G LGIG +   ++P+ V+GP
Sbjct: 601 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGP 660

Query: 338 F 338
           +
Sbjct: 661 W 661



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 156/327 (47%), Gaps = 27/327 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHS 135
           ACG +HTL LT  G +Y+ G ND GQLG       +  P  ++ L+  ++ Q   G  HS
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAHS 412

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+T  G++Y WG N+ GQLG      + I IP  +  ++     Q A G    +A+T  
Sbjct: 413 LALTNWGQVYSWGSNAVGQLGQETDTTRQI-IPRLIRSIAAKQVVQIAAGHYHCLALTNS 471

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++ +WG+   G+LG G  +  +         TP L++ L GV +   A G  HS  + +
Sbjct: 472 GELYAWGSNAYGQLGLGMTNEKVS--------TPTLVQSLAGVPIAFIACGGNHSFAVSK 523

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG 313
           +G ++ +G     ++   + N  + P+ +  L       V CG   +  LT+GG ++T G
Sbjct: 524 SGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCG 583

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHG 371
           +   G LG GS +    P R+      S + Q++CG +HT A   S GKI  +G  G   
Sbjct: 584 AGTFGQLGHGSCNNEILP-RMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGV-- 640

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                     GQLG G   +Y  P IV
Sbjct: 641 ----------GQLGIGIVGNYNTPQIV 657



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 145/305 (47%), Gaps = 32/305 (10%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTK 180
           KE+ + + G  H+  +T DG++Y  G N +GQLG      + +P   P  +  L      
Sbjct: 347 KEIARAACGASHTLLLTNDGKMYSCGNNDHGQLG---HDVESLPNKRPQLLTALENYIIT 403

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QA  G   S+A+T  G+V SWG+   G+L  GQE+       +T +  PRLI+ +   +V
Sbjct: 404 QACCGTAHSLALTNWGQVYSWGSNAVGQL--GQETD------TTRQIIPRLIRSIAAKQV 455

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCG 296
              AAG  H   +  +G +Y +G  A  ++ L         P+L+  L   P +  + CG
Sbjct: 456 VQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIA-FIACG 514

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G H+  ++  G ++ WG N  G LG+  ++    P +++   S   V  VSCG   +  +
Sbjct: 515 GNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLG-VRYVSCGDDFSVFL 573

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +  G + T G     GTF        GQLGHG+  + I P +V      K  Q++CG  H
Sbjct: 574 TAGGGVFTCG----AGTF--------GQLGHGSCNNEILPRMVFELMGSKITQIACGRRH 621

Query: 416 TGALL 420
           T A +
Sbjct: 622 TLAFV 626



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 32/245 (13%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LGLG + E    P +  +     +  +ACGG H+  ++++G ++  G N FG
Sbjct: 477 WGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 536

Query: 102 QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG+    S      L  LR  G++     +S G   S  +T  G ++  G  + GQLG 
Sbjct: 537 QLGLNDLNSRQFPTQLRTLRSLGVR----YVSCGDDFSVFLTAGGGVFTCGAGTFGQLGH 592

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQ--- 213
           G    ++  +P  V  L G    Q A G   ++A V   GK+  +G  G G+LG G    
Sbjct: 593 GSCNNEI--LPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGN 650

Query: 214 -----------ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG---FLHSACIDENGRV 259
                      +S IL F    SE     IK  + V++ + +A    F   ACI  NG +
Sbjct: 651 YNTPQIVRGPWQSQILTFSVQMSEELAA-IKPDDTVELDLMSAVETIFKSLACI--NGSL 707

Query: 260 YIFGD 264
            +  D
Sbjct: 708 LLPND 712


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 185/370 (50%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++A+ACG  H   +T+ G V++ G    G+LG  +  ++ +   P  + GLK   V+ ++
Sbjct: 273 VQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSH---PKFVDGLKNFNVELVA 329

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G + S A+T+ G+LY+WG N+   G LG G +A + +P   K+   L GI     + G 
Sbjct: 330 CGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVP--RKLSGPLEGIHVSSVSCGP 387

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG  SS+          TPR ++ L+G++    A G
Sbjct: 388 WHTAVVTSAGQLFTFGDGTFGVLGHGDRSSV---------STPREVESLKGLRTMRVACG 438

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P  
Sbjct: 439 VWHTAAVVEVMVGSSSSSNCSSGKLFTWGDG--DKGRLGHGDKEARLVPTYVATLVEPSF 496

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  LT+ G++YT GS   G LG    D    P RV+G   ++ V++++CG 
Sbjct: 497 CQVACGHSLTVALTTSGQVYTMGSPVYGQLGNPQADG-KVPTRVEGKLMKNFVEELACGA 555

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G+LGHG+  D   P+IV   ++ +   +
Sbjct: 556 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNFPSIVEALKDKQVKGI 603

Query: 410 SCGFNHTGAL 419
            CG + T A+
Sbjct: 604 ICGTSFTAAI 613



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 151/341 (44%), Gaps = 49/341 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           WG    GRLG G       P      +  +++ +ACG   +  +T +G +Y  G N  +F
Sbjct: 295 WGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNF 354

Query: 101 GQLGI-SENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G LG  SE   +   P ++SG  +   V  +S G  H++ +T  G+L+ +G  + G LG 
Sbjct: 355 GLLGCGSEATQWV--PRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGH 412

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
           G +++  +  P +VE L G+ T + A G   + AV               GK+ +WG G 
Sbjct: 413 GDRSS--VSTPREVESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGD 470

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            GRLGHG + + L          P  +  L        A G   +  +  +G+VY  G  
Sbjct: 471 KGRLGHGDKEARL---------VPTYVATLVEPSFCQVACGHSLTVALTTSGQVYTMGS- 520

Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
               +  Q GN    P    K+P          + EE+ CG YH  VLTS  E+YTWG  
Sbjct: 521 ---PVYGQLGN----PQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKG 573

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            NG LG G  D  + P  V+    +  V  + CG   TAAI
Sbjct: 574 ANGRLGHGDTDDRNFPSIVEA-LKDKQVKGIICGTSFTAAI 613



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 261 VPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDV--------- 311

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+ +  L+   V++ A G   S  +  +G +YI+G  A +  L   G+ A +  P  +
Sbjct: 312 SHPKFVDGLKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKL 371

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           S   +  +   V CG +HT V+TS G+L+T+G    G LG G    + +P  V+      
Sbjct: 372 SGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVES-LKGL 430

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
              +V+CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 431 RTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDK------------GRLGHGD 478

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 479 KEARLVPTYVATLVEPSFCQVACGHSLTVAL 509



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 17/202 (8%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           + P+ ++    + V+  A G  H+A + + G V+ +G+    ++     +    P  +  
Sbjct: 260 FVPKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDG 319

Query: 287 LPY--SEEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESP 342
           L     E V CG Y +C +T  G+LY WG N    G LG GS      P ++ GP     
Sbjct: 320 LKNFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIH 379

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  VSCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   
Sbjct: 380 VSSVSCGPWHTAVVTSAGQLFTFG----DGTF--------GVLGHGDRSSVSTPREVESL 427

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
           + ++ ++V+CG  HT A++E +
Sbjct: 428 KGLRTMRVACGVWHTAAVVEVM 449


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 177/367 (48%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   S +P  I  L    ++ ++ G
Sbjct: 351 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 409

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G   +  +P       L GI     + G   +
Sbjct: 410 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHVNGP-LEGIHVSSISCGPWHT 468

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 469 AVVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 519

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P   +V
Sbjct: 520 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKGPKLVPTCVAALVEPNFCQV 577

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG  H 
Sbjct: 578 ACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLHKNFVEEISCGAYHV 636

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S+ ++ TWG G +            G+LGHG+  D   PT+V   ++ +   V CG
Sbjct: 637 AVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQVRIVVCG 684

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 685 INFTAAI 691



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 373 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 432

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P  ++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 433 GLLGHGNDISHWV-PKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHG 491

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 492 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 549

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 550 GRLGHGDKGPKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 600

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 601 YGQLGNAQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGD 660

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 661 TDDKNTPTLVEA-LKDKQVRIVVCGINFTAAI 691



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 339 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 389

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 390 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKHV 449

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G  + +  P  V+      
Sbjct: 450 NGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLR 509

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 510 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 556

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG   T AL
Sbjct: 557 KGPKLVPTCVAALVEPNFCQVACGHCLTVAL 587



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 340 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 399

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ D+ H  P+ V GP     V
Sbjct: 400 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPKHVNGPLEGIHV 458

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 459 SSISCGPWHTAVVTSAGQLFTFGDG------------SFGVLGHGDRESISVPREVESLK 506

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 507 GLRTVRAACGVWHTAAVVEVM 527


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 173/387 (44%), Gaps = 37/387 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA-TGLNDFG 101
           WG G  G LG G  +    P V  A   H +K L  G  HT+ L  +G VY+        
Sbjct: 164 WGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGLGGR 223

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
                E   ++  PLR++GL+  ++  I+   +HS A+  +GE Y+WG+  +G LG+ G 
Sbjct: 224 LGQGRERDRFT--PLRLAGLRGFDITHIACNENHSVAVADNGEAYVWGRGIDGSLGVEGD 281

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K       PT++  L G     AA G   ++ V   G+V + G    G+LG G   ++  
Sbjct: 282 KHVS----PTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAM-- 335

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P L+  L    V+I A G  H+  + E GR+Y +G  +  ++   E    R
Sbjct: 336 -------SEPTLVTNLPERIVRI-ACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLEDR 387

Query: 280 -RPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P  +      ++V    CGG HT +L++ G LY +GS   G LG+G +   +      
Sbjct: 388 LSPVRVESNVVRDDVADFACGGNHTIILSNSGLLYAFGSGAQGQLGLGPLATKNQATPAA 447

Query: 336 GPFSE-SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
            P  E      +SCG   +AA+S+ GKI TWG G S+     DG +              
Sbjct: 448 LPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNALGLPDGRTK------------Y 495

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALL 420
            PT++    + +   V+CGF H  A +
Sbjct: 496 APTLIESMADKRCRTVACGFFHMAATI 522



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 109/269 (40%), Gaps = 67/269 (24%)

Query: 198 VLSWGAGGSGRLGHGQES---------SILGF---------------------------- 220
           V +WG G  G LGHG+E          ++LG                             
Sbjct: 161 VYTWGEGTRGMLGHGEEDPEASPRVVEALLGHDIKMLCLGSGHTMALAVSGEVYSWGLGL 220

Query: 221 ------LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  R    +TP  +  L G  +   A    HS  + +NG  Y++G R +D  L  E
Sbjct: 221 GGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG-RGIDGSLGVE 279

Query: 275 GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           G+    P+ I  L     V   CG   T  +   GE+Y  G+NE+G LGIGS + +  P 
Sbjct: 280 GDKHVSPTQIHALDGKRVVHAACGAAFTLFVIESGEVYACGNNEHGQLGIGSNEAMSEPT 339

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 390
            V     E  V +++CG  H  A+SE G++  WG            HSS GQLG G  + 
Sbjct: 340 LVTN-LPERIV-RIACGNSHAVALSETGRLYAWG-----------AHSS-GQLGVGEPLE 385

Query: 391 DYIHPTIVNFGENVKALQV---SCGFNHT 416
           D + P  V    NV    V   +CG NHT
Sbjct: 386 DRLSP--VRVESNVVRDDVADFACGGNHT 412


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 180/405 (44%), Gaps = 57/405 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG   LE    P +       S   +  LACGGAH L LT  G V   G   
Sbjct: 17  WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 76

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  + +  SL+P  +  L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 77  SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 135

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +   P+  KV         Q A G   S+ +  G +V  +G+G  G+LG   +++  
Sbjct: 136 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQLGVSMDNT-- 191

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              RS S   P+    LEGV++    A   HSA +  NG +Y +G        F   +  
Sbjct: 192 ---RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG------FGSTSDV 240

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG----------IGSIDV- 327
             P  +       +V  G  H  VLT GGE++  G N +G LG          +  I+V 
Sbjct: 241 HCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVF 300

Query: 328 LHSP--------ERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGH 378
           LH P        E+VQG      V Q++ G +H+A ++E +++ TWGWG           
Sbjct: 301 LHGPEESREENLEKVQG-LDGLNVVQIAAGAEHSALVTENRVIKTWGWG----------- 348

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKA----LQVSCGFNHTGAL 419
              GQLG GN  D I P  V  G  +      ++V CG   T A+
Sbjct: 349 -EHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 16/231 (6%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
           E++ WG  ++GQLG  +   + +P    +   S        A G    +A+T  GKV++W
Sbjct: 13  EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 72

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G SG+LGHG   S L          P+ +K LE   +   +AG+ HS  + + G ++ 
Sbjct: 73  GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 123

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            GD +  ++   +      P  +S     + +++ CG  H+ VL  G ++Y +GS + G 
Sbjct: 124 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQVYGFGSGKRGQ 183

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVS--CGWKHTAAIS-EGKILTWGWG 367
           LG+ S+D   S    Q       V+ +S      H+AA+S  G + TWG G
Sbjct: 184 LGV-SMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG 233



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S  P S  + CGG H   LT+ G++ TWG   +G LG G +     P+ V+    E
Sbjct: 42  PRFSSAGPISL-LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVK--LLE 98

Query: 341 SPV-DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           S V   VS GW H+  +S+ G + T G G            S GQLGHG+   +  P  V
Sbjct: 99  SFVMTHVSAGWSHSGFVSDTGCLFTCGDG------------SFGQLGHGDCKSHCSPVKV 146

Query: 399 NFGENVKALQVSCGFNHTGALLE 421
           ++ ++    Q++CG  H+  LL+
Sbjct: 147 SYFDSKHVDQIACGMRHSLVLLK 169


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 156/384 (40%), Gaps = 30/384 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    GRLG G+      PV  +     ++ A+A G  H+L +T  G   A G N FGQ
Sbjct: 65  WGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQ 124

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I  S  P+ +       V  +S G  H+ A+T  G    WG N  GQLG G   
Sbjct: 125 LGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT 184

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   +G      A G   S+AVT  G  L+WG   SG+LG G         
Sbjct: 185 RSRTPV--AVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDNSSGQLGDGT-------- 234

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T    P       G  +   AAG LHS  +   G V  +G     ++       +  P
Sbjct: 235 -ATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTP 293

Query: 282 SLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             +  +P    V     GG H+  +TS G++  WG N  G LG GS     +P  V  P 
Sbjct: 294 VAV-DVPAGTTVTAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPA 352

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             + +  V+ G  H+ A+ S    L WG      TF        GQLG G+    I P  
Sbjct: 353 GTT-ITAVATGSGHSLAVTSTDTALAWG----DNTF--------GQLGDGSTTSSIIPVA 399

Query: 398 VNFGENVKALQVSCGFNHTGALLE 421
           V+         ++ G  H+ A++ 
Sbjct: 400 VDLPAGTTVTAIAGGSFHSLAIVP 423


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 518

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 PT V         QV+CG   T AL
Sbjct: 519 KDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVPREVESLK 468

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 469 GLRTVRAACGVWHTAAVVEVM 489


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 179/391 (45%), Gaps = 42/391 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P +       S+ +LACGGAH + LT  G V + G  + GQ
Sbjct: 23  WGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQ 82

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +  SL P  ++ L    +  +S G+ HS  ++ +G ++  G  S GQLG G  A
Sbjct: 83  LGHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHA 142

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +   P+  KV C      +Q A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 143 SHCSPV--KVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSND------- 193

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S   P+++   EGV++   AA   HSA +  +G VY +G        F+    AR P
Sbjct: 194 RVKSVNVPKVVSGFEGVEIAGIAANGDHSAAVSVDGHVYTWGRG------FKGFEDARVP 247

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSP-------E 332
             ++      +V  G  H   ++  GE+   G N  G L  + +I    H P       E
Sbjct: 248 QCLNSSLNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLE 307

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +V G    + +  ++ G +H+  ++E G+I TWGWG              GQLG G+  D
Sbjct: 308 KVPG-LDGTKITDIATGAEHSVIVTEHGEIKTWGWG------------EHGQLGLGDTRD 354

Query: 392 YIHPTIVNFGENVK---ALQVSCGFNHTGAL 419
            I P  V+ G ++    ++ V CG   T A+
Sbjct: 355 RISPVTVSLGYDLNEAASVIVFCGSGFTFAV 385



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 56/223 (25%)

Query: 197 KVLSWGAGGSGRLG-------------HGQESSIL------------------------- 218
           +V SWGAG  G+LG             H    S +                         
Sbjct: 19  RVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRG 78

Query: 219 -------GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                  G + S S Y P+ +  L+G  +   +AG+ HS  + +NG V+  GD +  ++ 
Sbjct: 79  NSGQLGHGLVVSNSLY-PKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQL- 136

Query: 272 FQEGNHARR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--I 325
              G+HA    P  +S     + E+V CG  H+ VL  G ++Y +GS + G LG+ +  +
Sbjct: 137 -GHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRV 195

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
             ++ P+ V G F    +  ++    H+AA+S +G + TWG G
Sbjct: 196 KSVNVPKVVSG-FEGVEIAGIAANGDHSAAVSVDGHVYTWGRG 237



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 24/162 (14%)

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           I  D    ++L Q       PSL S       + CGG H   LTS G++ +WG   +G L
Sbjct: 35  ILQDEHFPQLLHQ-------PSLSSI----SSLACGGAHVIALTSAGKVLSWGRGNSGQL 83

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
           G G +       +         +  VS GW H+  +S+ G + T G G            
Sbjct: 84  GHGLVVSNSLYPKAVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDG------------ 131

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           S GQLGHG+   +  P  V+   +    QV+CG  H+  LL+
Sbjct: 132 SFGQLGHGDHASHCSPVKVSCFVDQHVEQVACGMRHSLVLLK 173


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 518

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 PT V         QV+CG   T AL
Sbjct: 519 KDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVPREVESLK 468

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 469 GLRTVRAACGVWHTAAVVEVM 489


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 172/375 (45%), Gaps = 41/375 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV      +  + A+  G +H+L L   G V+A G N  GQ
Sbjct: 110 WGDNPNGQLGEGTTTRRLVPVQVQGLSE--VVAVTAGSSHSLALRSDGTVWAWGANASGQ 167

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+ + GL  EVV +  G  HS A+  DG ++ WG N++GQLG G    
Sbjct: 168 LGEGTTTNR-LVPVPVLGL-SEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P    V+ LSG+   +A  G+  S+AV   G V +WG   SG+LG   + ++     
Sbjct: 226 RLVP----VQVLSGVVAMEAGSGY--SLAVRNDGTVWAWGYNFSGQLG---DDTV----- 271

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            TS  TP  +  L   +V   AAG   S  +  +G V+ +G    D     EG  + R  
Sbjct: 272 -TSRSTPVQVLGLS--EVVAVAAGSSLSLALRSDGTVWAWGSN--DYGQRGEGTTSNRAF 326

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P     L     V  G  H+  + S G ++ WGSN +G LG G+      P +VQG    
Sbjct: 327 PVQARGLSGGVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQVQG---L 383

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           S V  VS G   + AI S+G +  W            G ++ GQLG G   D + P  V 
Sbjct: 384 SGVVAVSAGASSSLAIRSDGTVWAW------------GSNASGQLGDGTTTDRLVPVQVQ 431

Query: 400 FGENVKALQVSCGFN 414
               V A+     F+
Sbjct: 432 GLSGVVAVVAGTSFS 446



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 160/323 (49%), Gaps = 25/323 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN   G+LG G+ ++R  PV      +  + A A G  H+L L   G V+A G N +GQL
Sbjct: 11  GNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWGYNGYGQL 68

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G + ++G   EP+++ GL    V +  G++HS A+  DG ++ WG N NGQLG G    +
Sbjct: 69  G-NGSLGSRAEPVQVQGLSGG-VSVDAGHYHSLAVRDDGTVWAWGDNPNGQLGEGTTTRR 126

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
           ++P+  +V+ LS +    A  G   S+A+   G V +WGA  SG+LG G          +
Sbjct: 127 LVPV--QVQGLSEVVAVTA--GSSHSLALRSDGTVWAWGANASGQLGEGT---------T 173

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T+   P  +  L   +V    AG  HS  +  +G V+ +G  A  ++   +G   +R   
Sbjct: 174 TNRLVPVPVLGLS--EVVAVEAGSSHSLALRSDGTVWAWGANASGQL--GDGTTTKRLVP 229

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           +  L     +  G  ++  + + G ++ WG N +G LG  ++    +P +V G    S V
Sbjct: 230 VQVLSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLG---LSEV 286

Query: 344 DQVSCGWKHTAAI-SEGKILTWG 365
             V+ G   + A+ S+G +  WG
Sbjct: 287 VAVAAGSSLSLALRSDGTVWAWG 309



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 164/349 (46%), Gaps = 39/349 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++ SR  PV      +  + A+A G + +L L   G V+A G ND+GQ
Sbjct: 258 WGYNFSGQLGDDTVTSRSTPVQVLGLSE--VVAVAAGSSLSLALRSDGTVWAWGSNDYGQ 315

Query: 103 LG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            G   + N  +   P++  GL   V  ++ GY HS A+  DG ++ WG N++GQLG G  
Sbjct: 316 RGEGTTSNRAF---PVQARGLSGGVA-VAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTT 371

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +  P+  +V+ LSG+    A  G   S+A+   G V +WG+  SG+LG G        
Sbjct: 372 SNRSEPV--QVQGLSGVVAVSA--GASSSLAIRSDGTVWAWGSNASGQLGDGT------- 420

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  ++ L GV   +A   F  S  +  +G V+ +G     ++          
Sbjct: 421 --TTDRLVPVQVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVLV 476

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  ++ L     V  G  H+  + S G ++  G N+NG LG GS     +P +V G    
Sbjct: 477 PVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPVQVTG---L 533

Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           S V  V+ G  H+ A+  +G +  W            G++S GQLG G+
Sbjct: 534 SGVVSVAAGDSHSLAVRYDGSVWAW------------GYNSFGQLGDGS 570



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 166/387 (42%), Gaps = 66/387 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ DYG+ G G+  +R  PV           A+A G AH+L +   G V+A G N  GQ
Sbjct: 308 WGSNDYGQRGEGTTSNRAFPVQARGLSGG--VAVAAGYAHSLAVRSDGTVWAWGSNASGQ 365

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S EP+++ GL   VV +S G   S AI  DG ++ WG N++GQLG G    
Sbjct: 366 LGEGTTSNRS-EPVQVQGLSG-VVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTD 423

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +++P+  +V+ LSG+    A   F  S+AV   G V  WG  G G+LG      +L    
Sbjct: 424 RLVPV--QVQGLSGVVAVVAGTSF--SLAVRNDGTVWGWGYNGYGQLGTFTSLFVL---- 475

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
                 P  +  L GV     AAG LHS  +  +G V+  G    D     +G+   R  
Sbjct: 476 -----VPVQVTGLSGVVA--VAAGNLHSLAVRSDGTVWALGRN--DNGQLGDGSWTNRSA 526

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  ++ L     V  G  H+  +   G ++ WG N  G LG GS     +P +V G    
Sbjct: 527 PVQVTGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTGLSGR 586

Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWGW--------------------------------G 367
             V   S    ++ A+  +G +  WG+                                G
Sbjct: 587 GSVAASS---DYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEVG 643

Query: 368 GSH-------GTFSEDGHSSGGQLGHG 387
            SH       GT    G++S GQLG+G
Sbjct: 644 SSHSLALRSDGTVWTWGYNSFGQLGNG 670



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 156/341 (45%), Gaps = 37/341 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV      +  + A+  G +H+L L   G V+A G N  GQ
Sbjct: 160 WGANASGQLGEGTTTNRLVPVPVLGLSE--VVAVEAGSSHSLALRSDGTVWAWGANASGQ 217

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++      VV +  G  +S A+  DG ++ WG N +GQLG     +
Sbjct: 218 LGDGTTT-KRLVPVQV---LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTS 273

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +     A G   S+A+   G V +WG+   G+ G G  S       
Sbjct: 274 RSTPV--QVLGLSEVVA--VAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTS------- 322

Query: 223 STSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             +   P   + L  GV V   AAG+ HS  +  +G V+ +G  A  ++   EG  + R 
Sbjct: 323 --NRAFPVQARGLSGGVAV---AAGYAHSLAVRSDGTVWAWGSNASGQL--GEGTTSNRS 375

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     V  G   +  + S G ++ WGSN +G LG G+      P +VQG   
Sbjct: 376 EPVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQG--- 432

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWG----GSHGTFSE 375
            S V  V  G   + A+ ++G +  WGWG    G  GTF+ 
Sbjct: 433 LSGVVAVVAGTSFSLAVRNDGTV--WGWGYNGYGQLGTFTS 471



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 131/279 (46%), Gaps = 27/279 (9%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
           G V+A G N  GQLG       S  P+++ GL  EVV  + G  HS A+  DG ++ WG 
Sbjct: 5   GTVWAAGNNGSGQLGDGTRDNRS-TPVQVLGLS-EVVAAAAGSIHSLALRNDGTVWAWGY 62

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  GQLG G   ++  P+  +V+ LSG  +  A  G   S+AV   G V +WG   +G+L
Sbjct: 63  NGYGQLGNGSLGSRAEPV--QVQGLSGGVSVDA--GHYHSLAVRDDGTVWAWGDNPNGQL 118

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G          +T    P  ++ L   +V    AG  HS  +  +G V+ +G  A  +
Sbjct: 119 GEGT---------TTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSDGTVWAWGANASGQ 167

Query: 270 MLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   EG    R   +  L  SE V    G  H+  L S G ++ WG+N +G LG G+   
Sbjct: 168 L--GEGTTTNRLVPVPVLGLSEVVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTK 225

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
              P +V      S V  +  G  ++ A+ ++G +  WG
Sbjct: 226 RLVPVQVL-----SGVVAMEAGSGYSLAVRNDGTVWAWG 259



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 127/278 (45%), Gaps = 39/278 (14%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           DG ++  G N +GQLG G +  +  P+  +V  LS +    AA G   S+A+   G V +
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRSTPV--QVLGLSEVVA--AAAGSIHSLALRNDGTVWA 59

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRV 259
           WG  G G+LG+G        L S +E  P  ++ L  GV V    AG  HS  + ++G V
Sbjct: 60  WGYNGYGQLGNGS-------LGSRAE--PVQVQGLSGGVSVD---AGHYHSLAVRDDGTV 107

Query: 260 YIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
           + +GD    ++   EG   RR  P  +  L     V  G  H+  L S G ++ WG+N +
Sbjct: 108 WAWGDNPNGQL--GEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANAS 165

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 376
           G LG G+      P  V G    S V  V  G  H+ A+ S+G +  W            
Sbjct: 166 GQLGEGTTTNRLVPVPVLG---LSEVVAVEAGSSHSLALRSDGTVWAW------------ 210

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           G ++ GQLG G     + P  V  G  V A++   G++
Sbjct: 211 GANASGQLGDGTTTKRLVPVQVLSG--VVAMEAGSGYS 246



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 20/169 (11%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGYHTCVLTSGGELY 310
           +  +G V+  G+    ++   +G    R + +  L  SE V    G  H+  L + G ++
Sbjct: 1   MRPDGTVWAAGNNGSGQL--GDGTRDNRSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVW 58

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSH 370
            WG N  G LG GS+     P +VQG      VD    G  H+ A+ +   + W W    
Sbjct: 59  AWGYNGYGQLGNGSLGSRAEPVQVQGLSGGVSVD---AGHYHSLAVRDDGTV-WAW---- 110

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G +  GQLG G     + P  V     V A  V+ G +H+ AL
Sbjct: 111 ------GDNPNGQLGEGTTTRRLVPVQVQGLSEVVA--VTAGSSHSLAL 151


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 163/341 (47%), Gaps = 42/341 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQIS 129
           +K++A G  HTLFL++ G V++ G N  G+LG   + E   Y++ P+ IS     ++QIS
Sbjct: 49  VKSIASGERHTLFLSDDGKVWSCGSNYNGELGRGGVREG-SYTIYPVHISS-TVSIIQIS 106

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIP--IPTKVECLSGIFTKQAALGF 186
            G  HS A++ DG L+ WG NS+GQL + G   A   P  +P+  E      T Q A G 
Sbjct: 107 AGRSHSMAVSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE------TVQVACGA 160

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +V++ GGG+V  WG    GR+ H                +P  ++    + +   +AG
Sbjct: 161 SHTVSLNGGGRVFIWGQQSDGRIRH----------------SPAEVEIFISIPIVQISAG 204

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            L +  +  +G ++ +G     ++          P  +  +     V CG  H+  LT  
Sbjct: 205 NLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNINSVVAVECGDSHSIALTHE 264

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G +++ GS+  G LG G  +   +  R       S V +++CG  HT  ++ GK+ T+G 
Sbjct: 265 GRVFSCGSDSFGQLGCGQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVANGKMHTFGL 324

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
                       +S GQLGHGN  + I P +++  ENV ++
Sbjct: 325 ------------NSNGQLGHGNTRNQITPRVIDSVENVASV 353



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 30/312 (9%)

Query: 45  NGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG 104
           NG+ GR G+        PV  S+    S+  ++ G +H++ +++ G ++A G N  GQL 
Sbjct: 76  NGELGRGGVREGSYTIYPVHISS--TVSIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLA 133

Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
           +S +I  S  P R+  L  E VQ++ G  H+ ++   G +++WG+ S+G++         
Sbjct: 134 MSGDILASDTPKRVPSL-PETVQVACGASHTVSLNGGGRVFIWGQQSDGRIRHS------ 186

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
              P +VE    I   Q + G   ++A+T  G + +WG    G+LG      ++      
Sbjct: 187 ---PAEVEIFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVN----- 238

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL- 283
               P  +  +  V       G  HS  +   GRV+  G  +  ++   + N ++     
Sbjct: 239 ----PCAVPNINSVVA--VECGDSHSIALTHEGRVFSCGSDSFGQLGCGQPNRSQNCMRG 292

Query: 284 ISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           I+++   +   + CG  HT V+ + G+++T+G N NG LG G+     +P  +    S  
Sbjct: 293 ITEMLGSHVTRIACGRCHTIVV-ANGKMHTFGLNSNGQLGHGNTRNQITPRVID---SVE 348

Query: 342 PVDQVSCGWKHT 353
            V  V  GW  +
Sbjct: 349 NVASVFAGWDQS 360



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 44/289 (15%)

Query: 143 ELYMWGKNSNGQLGLGKKA----AKVIPIPTKV----ECLSGIFTKQAALGFEQSVAVTG 194
           +LY++G   +GQLG    +    A+++ +P  V       +G+  K  A G   ++ ++ 
Sbjct: 5   QLYVFGCAGDGQLGFRPDSVESDAQMMIVPRLVYGAPTRQNGVIVKSIASGERHTLFLSD 64

Query: 195 GGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            GKV S G+  +G LG G  +E S          YT   +     V +   +AG  HS  
Sbjct: 65  DGKVWSCGSNYNGELGRGGVREGS----------YTIYPVHISSTVSIIQISAGRSHSMA 114

Query: 253 IDENGRVYIFGDRAVDKMLFQ-EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           + ++GR++ +G  +  ++    +   +  P  +  LP + +V CG  HT  L  GG ++ 
Sbjct: 115 VSDDGRLFAWGSNSHGQLAMSGDILASDTPKRVPSLPETVQVACGASHTVSLNGGGRVFI 174

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
           WG   +G        + HSP  V+  F   P+ Q+S G   T A++  G +  W      
Sbjct: 175 WGQQSDG-------RIRHSPAEVE-IFISIPIVQISAGNLFTMALTASGTLFAW------ 220

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G +  GQLG   + D ++P  V    +V A  V CG +H+ AL
Sbjct: 221 ------GKNEEGQLGDFTNKDVVNPCAVPNINSVVA--VECGDSHSIAL 261



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 18/156 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG  + +    P  C+    +S+ A+ CG +H++ LT  G V++ G + FGQ
Sbjct: 220 WGKNEEGQLGDFTNKDVVNP--CAVPNINSVVAVECGDSHSIALTHEGRVFSCGSDSFGQ 277

Query: 103 LGI-----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG      S+N    +  +    L   V +I+ G  H + +  +G+++ +G NSNGQLG 
Sbjct: 278 LGCGQPNRSQNCMRGITEM----LGSHVTRIACGRCH-TIVVANGKMHTFGLNSNGQLGH 332

Query: 158 GKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAV 192
           G    ++ P +   VE ++ +F      G++QS  +
Sbjct: 333 GNTRNQITPRVIDSVENVASVFA-----GWDQSFCL 363


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   +   L  S     +  ++ G 
Sbjct: 313 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGE 372

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T+ G+LY WG  +   G LG G   +  +P   +V+  L GI     + G   +
Sbjct: 373 YHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVP--KRVDGPLEGIHVSSISCGPWHT 430

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG  +S+           PR ++ L+G++   AA G  H
Sbjct: 431 ALVTSAGQLFTFGDGSFGVLGHGDRASL---------SVPREVESLKGLRTVRAACGVWH 481

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 482 TAAVVEVMVGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKDSRFVPTCVAALVEPNFCQV 539

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D L  P RV+G   ++ V+++SCG  H 
Sbjct: 540 ACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGL-LPVRVEGKLHKNFVEEISCGAYHV 598

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG   D   PT+V   ++ +   V CG
Sbjct: 599 AVLTSRTEVYTWGKGAN------------GRLGHGGTDDKNTPTLVEALKDKQVRSVVCG 646

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 647 INFTAAI 653



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 335 WGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 394

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+ G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 395 GLLGHGNDVSHWV-PKRVDGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 453

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +A+  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 454 DRAS--LSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK 511

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S          + P  +  L        A G   +  +  +G VY  G   
Sbjct: 512 GRLGHGDKDS---------RFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 562

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 563 YGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGG 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 623 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 653



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 114/271 (42%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 301 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVA-------- 352

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 353 -QPKLIDSLAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRV 411

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   + CG +HT ++TS G+L+T+G    G LG G    L  P  V+      
Sbjct: 412 DGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLR 471

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 472 TV-RAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 518

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 PT V         QV+CG   T AL
Sbjct: 519 KDSRFVPTCVAALVEPNFCQVACGHCLTVAL 549



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 302 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLA 361

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+RV GP     V
Sbjct: 362 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKRVDGPLEGIHV 420

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 421 SSISCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRASLSVPREVESLK 468

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 469 GLRTVRAACGVWHTAAVVEVM 489


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 163/327 (49%), Gaps = 32/327 (9%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +   R    SA +   +K LA       H + LTE G V++ G  D+
Sbjct: 805  GEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDY 864

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ +EVVQ++ G+ HS+ +T+DG+L+ +G    G+LG G 
Sbjct: 865  GKLG-HGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS 923

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
               K   IP +V  L      Q A G   +V V+     V + G G  G+LG G  S+  
Sbjct: 924  TTNK--KIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIGGTSA-- 979

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + +P  I+ L  V +K  + G   +A +  +G++++FG    D+M    GN  
Sbjct: 980  -------KTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQ---DRMC---GNCE 1026

Query: 279  RR------PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
             R      P +++ L   +  ++  G  HT  LTS G +YTWGSN +G LG+G  + +  
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086

Query: 331  PERVQGPFSESPVDQVSCGWKHTAAIS 357
            P  V+   S   + Q+S G  H+AA S
Sbjct: 1087 PTLVES-LSGKNIRQISAGRTHSAAWS 1112



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 178/393 (45%), Gaps = 52/393 (13%)

Query: 42   LWGNGDYGRL---GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            L+G G +G+L   G G L     P +  +F  H  + + CG   T  +   G V + G  
Sbjct: 754  LFGAGRHGQLAEVGSGVL----VPQLTKSF--HEARKVVCGQNCTFIINNNGVVLSCGEG 807

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
             +G+LG   N   S     IS L+  +V+    STG   H+ A+T +GE++ WG    G+
Sbjct: 808  SYGRLG-QGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGK 866

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +    P ++E L G    Q A GF+ S  VT  GK+ ++G G  GRLGHG  
Sbjct: 867  LGHGNSDRQ--RRPRQIEALRGQEVVQVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGS- 923

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI-DENGRVYIFGDRAVDKMLFQ 273
                    +T++  P  +  LE   +   A G  H+  +  +N  V+  GD    K+   
Sbjct: 924  --------TTNKKIPERVMALENYIIGQVACGLNHTVIVSQDNLTVWACGDGDYGKLGIG 975

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              +    P+ I  L     +++ CG   T  LT  G+L+ +G +       G+ +   SP
Sbjct: 976  GTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDR----MCGNCETRTSP 1031

Query: 332  E---RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
                +V    S   +  +S G +HT A+ S+G + TWG             ++ GQLG G
Sbjct: 1032 SFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWG------------SNTDGQLGLG 1079

Query: 388  NDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 418
            +      PT+V    G+N++  Q+S G  H+ A
Sbjct: 1080 HTNHVQEPTLVESLSGKNIR--QISAGRTHSAA 1110



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 141/352 (40%), Gaps = 58/352 (16%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLR----ISGLKKEVVQISTGYHHSSAITVDGEL 144
            T C ++    D     I  +   S +PL     + G+ +++V       +        ++
Sbjct: 693  TRCKFSQEFIDLFHEEIQLDSSISKDPLDNTQWVQGMDEQLVSWYEQCPNDWQCGTHCDV 752

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG--------- 195
            Y++G   +GQL                E  SG+   Q    F ++  V  G         
Sbjct: 753  YLFGAGRHGQLA---------------EVGSGVLVPQLTKSFHEARKVVCGQNCTFIINN 797

Query: 196  -GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFL---H 249
             G VLS G G  GRLG G            S+ + RL  I  L+G  VK  A       H
Sbjct: 798  NGVVLSCGEGSYGRLGQGN-----------SDDSNRLTHISALQGFIVKQLATSTGSDGH 846

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            +  + ENG V+ +GD    K+     +  RRP  I  L   E  +V CG  H+ V+T  G
Sbjct: 847  AIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDG 906

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
            +L+T+G  + G LG GS      PERV        + QV+CG  HT  +S+  +  W  G
Sbjct: 907  KLFTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVSQDNLTVWACG 965

Query: 368  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                    DG    G+LG G       PT +     V   ++SCG   T AL
Sbjct: 966  --------DG--DYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAAL 1007


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 176/367 (47%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +T+ G +Y+ G    G+LG   +   S +P  I  L    ++ ++ G
Sbjct: 112 VQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVS-QPKLIDALSHMNIELVACG 170

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +   G LG G   +  +P       L GI     + G   +
Sbjct: 171 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCGPWHT 229

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 230 ALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAACGVWH 280

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P   +V
Sbjct: 281 TAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNFCQV 338

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG  H 
Sbjct: 339 ACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGM-LPVRVEGKLHKNFVEEISCGAYHV 397

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   V CG
Sbjct: 398 AVLTSRTEVYTWGKGAN------------GRLGHGDTDDKNTPTLVEALKDKQVRSVVCG 445

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 446 INFTAAI 452



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 152/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 134 WGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 193

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P  ++G  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 194 GLLGHGNDVSHWV-PKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG 252

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 253 DRES--ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 310

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 311 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 361

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 362 YGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGD 421

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 422 TDDKNTPTLVEA-LKDKQVRSVVCGINFTAAI 452



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 117/271 (43%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G   +  VT  G++ SWG    GRLGHG +  +         
Sbjct: 100 VPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDV--------- 150

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  +
Sbjct: 151 SQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHV 210

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  + +  P  V+      
Sbjct: 211 NGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLR 270

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 271 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 317

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG   T AL
Sbjct: 318 KEAKLVPTCVAALVEPNFCQVACGHCLTVAL 348



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++         +P LI  L 
Sbjct: 101 PKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALS 160

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ DV H  P+ V GP     V
Sbjct: 161 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DVSHWVPKHVNGPLEGIHV 219

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 220 SSISCGPWHTALVTSAGQLFTFGDG------------SFGVLGHGDRESISVPREVESLK 267

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 268 GLRTVRAACGVWHTAAVVEVM 288


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 153/340 (45%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 328 WGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTCAVTLSGDLYTWGDGTYNF 387

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 388 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 446

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 447 DR--KSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 504

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 505 GRLGHGDKEAKL---------VPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGS-- 553

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 554 --PVYGQLGN----PQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGA 607

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  D  + P  V+    +  V  ++CG   TAAI
Sbjct: 608 NGRLGHGDTDDRNFPSLVEA-LKDKQVKSIACGTNFTAAI 646



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 182/370 (49%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 306 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNINIELVA 362

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 363 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 420

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 421 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SIPREVESLKGLRTVRAACG 471

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 472 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVAALVEPNF 529

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++++CG 
Sbjct: 530 CQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPNRVEGRLSKSFVEEIACGA 588

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S+ ++ TWG G +            G+LGHG+  D   P++V   ++ +   +
Sbjct: 589 YHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDRNFPSLVEALKDKQVKSI 636

Query: 410 SCGFNHTGAL 419
           +CG N T A+
Sbjct: 637 ACGTNFTAAI 646



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 55/317 (17%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQL----------GLGKKAAKVIPIPTKVECLSGIFTK 180
           G+  S A+   G++++WG+ +   +          G G K   ++P    +E    +  +
Sbjct: 253 GHDDSDAL---GDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLP--KALESTVVLDVQ 307

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             A G   +  VT  G+V SWG    GRLGHG +S +L          P+LI  L  + +
Sbjct: 308 NIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIDSLSNINI 358

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVC 295
           ++ A G  H+  +  +G +Y +GD   +  L   GN      P  ++   +  +   + C
Sbjct: 359 ELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 418

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G +HT V+TS G+L+T+G    G LG G    +  P  V+       V + +CG  HTAA
Sbjct: 419 GPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTV-RAACGVWHTAA 477

Query: 356 ISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           + E             GK+ TWG G              G+LGHG+    + PT V    
Sbjct: 478 VVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTCVAALV 525

Query: 403 NVKALQVSCGFNHTGAL 419
                QV+CG + T AL
Sbjct: 526 EPNFCQVACGHSLTVAL 542



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 295 PKALESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLS 354

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
               E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 355 NINIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 413

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 414 SSISCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRKSVSIPREVESLK 461

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 462 GLRTVRAACGVWHTAAVVEVM 482


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 4011 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4070

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4071 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4130

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  +E L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4131 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4182

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4183 ---SDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4239

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4240 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4298

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4299 LQGKKITRVACGSAHTLAWSTMK 4321



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 153/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K ++   GG H L LT+ G V++ G  + G
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEGEDG 3051

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   +I    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3052 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3110

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3111 ATQ--SKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3163

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3164 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3219

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3220 RKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3279

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3280 -LDDARVNRVSCGSSHSIA 3297



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 176/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3958 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 4016

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 4017 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4074

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4075 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4128

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+LI+ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4129 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4183

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4184 DGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4243

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A ++ G++ TWG             +  GQLG G     
Sbjct: 4244 VAA-LQGKKIISIATGSLHCVACTDKGEVFTWG------------DNDEGQLGDGTTSAL 4290

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4291 QRPRLVHALQGKKITRVACGSAHTLA 4316



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 37/393 (9%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
            Q     +WG  D  +LG G   S+ + PV      K     +A GG+ TLF+ ++ G +Y
Sbjct: 2932 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2989

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
            A G    G+LG+ ++     EP  I  L + V++   + +G  H+ A+T DG+++ WG+ 
Sbjct: 2990 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG 3048

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             +G+LG G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLG
Sbjct: 3049 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 3106

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
            HG          + ++  P+L++ L G ++   A G     +  +  +G VY +GD    
Sbjct: 3107 HGD---------TATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFG 3157

Query: 269  KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            K+     +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+  
Sbjct: 3158 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3217

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P  V+G      V  V+ G  H  A+++ G++  WG         ++ H   GQ G
Sbjct: 3218 HVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDIGQVYAWG---------DNDH---GQQG 3264

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            +G  +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3265 NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3297



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 2936 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2985

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +    P P  +  LS    K+ ++  G + ++A+T  GKV 
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVSVHSGGKHALALTQDGKVF 3043

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 3044 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 3094

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      ++ CG     T  LT+ G +Y+WG  
Sbjct: 3095 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDG 3154

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
            + G LG G  D  ++P   +R+ G      V Q+ CG + + A+++ G++ TWG G    
Sbjct: 3155 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3209

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3210 -----------RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 4011

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 4012 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4069

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4070 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 4120

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P LI  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4121 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4180

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G  D    P +++   +   V +V CG + + A++  G I TWG G  H           
Sbjct: 4181 GGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4228

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4229 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4264



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 142/316 (44%), Gaps = 28/316 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           + +Y     +LG K   C        +R    L  NG+   +  GS E+++ P     F 
Sbjct: 451 SPFYYDTIAELGIKQLCCT-------ERALMILSVNGNVYMMYYGS-ETQY-PQRVYGFS 501

Query: 70  KHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVV 126
           +  +  +A    G H L LT+   VY+ G  D G+LG  +   Y  EP  I  L +K + 
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYD-EPKLIEALVEKNIT 560

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            I+ G  +S+A++ +GELY WG+ + G+LG G   +  + IPT V  L+G      A G 
Sbjct: 561 FIACGSTYSAALSSNGELYTWGRGNYGRLGHGN--SDNVMIPTLVTALNGHMVVYVACGS 618

Query: 187 --EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
              Q++ VT  G V SWG G  G+LG G               TP+++ +L  + V    
Sbjct: 619 GDSQTLCVTASGIVFSWGDGNYGKLGRGG---------CDGSKTPKIVDKLLDINVAKVY 669

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCV 302
            G   SA +   G VY +G     ++     +H R P +I   K    +E+  G  H   
Sbjct: 670 CGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLA 729

Query: 303 LTSGGELYTWGSNENG 318
           LT    +Y WG N+ G
Sbjct: 730 LTEDQLIYGWGRNDYG 745



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 31/302 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG 131
           +K L C     + L+  G VY        Q            P R+ G  +K ++ I++ 
Sbjct: 463 IKQLCCTERALMILSVNGNVYMMYYGSETQY-----------PQRVYGFSEKPIIMIASH 511

Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
               H  A+T D  +Y WG    G+LG G +A      P  +E L        A G   S
Sbjct: 512 SDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAW--YDEPKLIEALVEKNITFIACGSTYS 569

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGF 247
            A++  G++ +WG G  GRLGHG   +++          P L+  L G  V   A  +G 
Sbjct: 570 AALSSNGELYTWGRGNYGRLGHGNSDNVM---------IPTLVTALNGHMVVYVACGSGD 620

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
             + C+  +G V+ +GD    K+     + ++ P ++ KL      +V CGG  +  LT+
Sbjct: 621 SQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTA 680

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
            GE+YTWG  E   LG G+ D +  P ++        V ++  G  H  A++E +++ +G
Sbjct: 681 YGEVYTWGKGEAYRLGHGNEDHVRYP-KIIDILKTKKVKELCVGNLHVLALTEDQLI-YG 738

Query: 366 WG 367
           WG
Sbjct: 739 WG 740



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 31/286 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 2936 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2993

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G +S++           P+ I  L    +K  +  +G  H+  + ++G+V+ 
Sbjct: 2994 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFS 3044

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  E G 
Sbjct: 3045 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 3104

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSED 376
            LG G       P+ VQ    +  + Q++CG +     A  ++G + +WG     G F   
Sbjct: 3105 LGHGDTATQSKPKLVQSLVGQRII-QIACGSRDAQTMALTADGLVYSWG----DGDF--- 3156

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
                 G+LG G       P +++    +  +Q+ CG   + AL +Y
Sbjct: 3157 -----GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY 3197



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 130/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +P   E LS +   Q   G +   AVT  GKV + 
Sbjct: 3953 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 4010

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S++          P L++ ++ V VK  A  +G  H   +   G V
Sbjct: 4011 GYGAVGRLGIGGTDSVM---------VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI +L  +E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 4121

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  +   +P+ ++    +  V  V+CG     T  +++   + W WG        
Sbjct: 4122 GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWG-------- 4171

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  +     +  ++V CG   + AL
Sbjct: 4172 DGDY--GKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL 4213



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG  +             P+LI+ L    +   A G  +
Sbjct: 518 LALTQDNSVYSWGNGDGGRLGHGDRAWY---------DEPKLIEALVEKNITFIACGSTY 568

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     ++   P+L++ L       V CG     T  +T+
Sbjct: 569 SAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTA 628

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +++WG    G LG G  D   +P ++     +  V +V CG + +AA++  G++ TW
Sbjct: 629 SGIVFSWGDGNYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTW 687

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHGN+    +P I++  +  K  ++  G  H  AL E
Sbjct: 688 GKGEAY------------RLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTE 732



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG G E + +          P L + L  ++      G      +
Sbjct: 3951 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 4001

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  AV ++     +    P+L+  + +       V  GG H   L+S G +
Sbjct: 4002 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4061

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
            Y+WG  ++G LG G+      P+ ++       VD ++CG  H+AAI S G + TWG G 
Sbjct: 4062 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGKG- 4119

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P ++   ++ K + V+CG
Sbjct: 4120 -----------RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 4152



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+YG+LG G  +    P +       ++  + CGG  +  LT  G VY  G  +  +
Sbjct: 635 WGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYR 694

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N  +   P  I  LK K+V ++  G  H  A+T D  +Y WG+N  GQ  +    
Sbjct: 695 LG-HGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWGRNDYGQ--IDPAL 751

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             V+P PT    LSG      A G  QS A
Sbjct: 752 GTVVPEPTLCPTLSGKNVIGLACGPTQSFA 781



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            ++  VY++G    D++   +G+  + P     L   + V + GG  T  V++  G+LY  
Sbjct: 2932 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2991

Query: 313  GSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQVSC--GWKHTAAIS-EGKILTWGWGG 368
            G   NG LG+G    +  P+ +  PF S+  + +VS   G KH  A++ +GK+ +WG G 
Sbjct: 2992 GEGTNGRLGLGDDSNVCEPKPI--PFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG- 3048

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  EDG     +LGHGN +    P ++   ++ +   ++CG  H+ A+
Sbjct: 3049 ------EDG-----KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 3088



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 16/133 (12%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG  ++  L+S GELYTWG    G LG G+ D +  P  V    +   V  V+CG   
Sbjct: 562 IACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTA-LNGHMVVYVACGSGD 620

Query: 353 TAAI---SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           +  +   + G + +WG G              G+LG G       P IV+   ++   +V
Sbjct: 621 SQTLCVTASGIVFSWGDGNY------------GKLGRGGCDGSKTPKIVDKLLDINVAKV 668

Query: 410 SCGFNHTGALLEY 422
            CG   + AL  Y
Sbjct: 669 YCGGQFSAALTAY 681


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG GS   R  PV     +   + A+A G  H+L L   G V+A G ND+GQ
Sbjct: 194 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 251

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +S  P+ + GL  +VV ++ G  HS A+  DG ++ WG N  GQLG      
Sbjct: 252 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 309

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P   +VE L  +     A GF  S+AV  GG + SWG   SG+LG+G  SS      
Sbjct: 310 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 359

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L    V   AAG +HS  +  +G V+ +G     ++  +       P 
Sbjct: 360 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 414

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +  L     V  G YH+  + +GG L+ WG N+ G LG     ++  P
Sbjct: 415 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 463



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 164/364 (45%), Gaps = 43/364 (11%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S+ R     A ++  ++A+A G  ++L L   G V+A G N  GQLG       S  P  
Sbjct: 107 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 165

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           + GL + V  ++ G  H+ A+  DG ++ WG N  GQLG G  A +  P+  +V  L G+
Sbjct: 166 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 222

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                A G+  S+A+   G V +WG    G+LG+G          +    TP  +  L  
Sbjct: 223 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 271

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V +AA GF HS  +  +G V+ +G+    ++         +P  +  L     V  G 
Sbjct: 272 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 329

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
           YH+  + +GG L++WG+N +G LG GS      P  VQG      V  V+ G  H+ A+ 
Sbjct: 330 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG---LGAVTSVAAGGMHSVAVQ 386

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCG 412
           ++G +  W            G +  GQLGH    +   P        V  LQ    V+ G
Sbjct: 387 ADGTVWAW------------GRNEEGQLGHERAPERATPV------RVPGLQGEVAVAAG 428

Query: 413 FNHT 416
           F H+
Sbjct: 429 FYHS 432


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 156/305 (51%), Gaps = 20/305 (6%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G +++ G N  GQLG  + +     P RI  L    V  +S G
Sbjct: 25  LRQAASGERHSLLLLSNGELHSCGDNSQGQLG-RKGVQRDEHPKRIRTLDNLRVDLVSCG 83

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IPTK++ L+GI   Q + G   S+A
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGVGE-FKEINLIPTKIKTLTGIKIIQVSCGHYHSLA 142

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++ GG+V SWG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 143 LSEGGQVFSWGSNSHGQLGLGKECP--------SQASPQRVRSLDGIPLTQVAAGGAHSF 194

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
            +  +G  + +G     ++  ++ N    + +P  I  L       + CG  HT VLT  
Sbjct: 195 ALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQT 254

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
           G+++T+G N  G LG         P+ V+G   +  V Q+ CG  HT A   + GK++++
Sbjct: 255 GKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GRGPS 317



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 146/305 (47%), Gaps = 37/305 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  +GEL+  G NS GQ  LG+K  +    P ++  L  +     +
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQ--LGRKGVQRDEHPKRIRTLDNLRVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I           P  IK L G+K+   
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEI--------NLIPTKIKTLTGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + E G+V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLT-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAI 356
           +  L+  G  + WGSN  G L +   +V    H P  + G      V  +SCG++HTA +
Sbjct: 193 SFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSI-GALKNLGVIYISCGYEHTAVL 251

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGF 413
           ++ GK+ T+G G S+           GQLGH    +   P +V   E +  L  Q+ CG 
Sbjct: 252 TQTGKVFTFG-GNSY-----------GQLGHSPTAEKEGPQLV---EGIDGLVSQIDCGS 296

Query: 414 NHTGA 418
            HT A
Sbjct: 297 YHTLA 301



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   ++    P      +   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+ E    +L P +I  L   +++Q+S G++HS A++  G+++ WG NS+GQLGLGK+  
Sbjct: 108 GVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L   Q +       
Sbjct: 168 SQAS-PQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNV------ 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + PR I  L+ + V   + G+ H+A + + G+V+ FG  +  ++          P 
Sbjct: 221 PVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
           L+  +     ++ CG YHT   V T+G
Sbjct: 281 LVEGIDGLVSQIDCGSYHTLAYVYTTG 307



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P          +  ++CG  H+L L+E G V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L    + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 153 GSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L +     +P+    P  +  L  +     + G+E +  +T  GKV ++G    G+LG
Sbjct: 213 LALRQNN---VPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           H   +   G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 HSPTAEKEG---------PQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 121/251 (48%), Gaps = 32/251 (12%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G++ S G    G+LG        G  R      P+ I+ L+ ++
Sbjct: 26  RQAASGERHSLLLLSNGELHSCGDNSQGQLGRK------GVQRDEH---PKRIRTLDNLR 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V + + G  HS  +   GRV+ +G  +  ++    F+E N    P+ I  L   +  +V 
Sbjct: 77  VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLI--PTKIKTLTGIKIIQVS 134

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG YH+  L+ GG++++WGSN +G LG+G       SP+RV+      P+ QV+ G  H+
Sbjct: 135 CGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRVRS-LDGIPLTQVAAGGAHS 193

Query: 354 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLG---HGNDVDYIHPTIVNFGENVKALQVS 410
            A+S     ++GWG ++           GQL    +   V    P  +   +N+  + +S
Sbjct: 194 FALSLSGA-SFGWGSNN----------AGQLALRQNNVPVQSHKPRSIGALKNLGVIYIS 242

Query: 411 CGFNHTGALLE 421
           CG+ HT  L +
Sbjct: 243 CGYEHTAVLTQ 253



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  +G+LGLG    S+  P    + +   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 152 WGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAG 211

Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL + +N     S +P  I  LK   V+ IS GY H++ +T  G+++ +G NS GQLG  
Sbjct: 212 QLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             A K    P  VE + G+ ++     +     V   GKV+S+G G S
Sbjct: 272 PTAEK--EGPQLVEGIDGLVSQIDCGSYHTLAYVYTTGKVVSFGRGPS 317


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score =  129 bits (323), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 161/341 (47%), Gaps = 41/341 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG ++      FG+   + N+     P +          +S G  HS+ IT +G L 
Sbjct: 9   IPETGAIFT-----FGRTSFANNV-----PSKFWLKNDHPKHMSCGGEHSAVITENGRLL 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGL  K +     PT V+ L     K AA G + ++  T  G V S G+  
Sbjct: 59  MFGGNTWGQLGLRIKPSA--RKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQ 116

Query: 206 SGR--LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+  LGH  +S+    LR   ++ P          +K+ +AG   SA + E+GR++++G
Sbjct: 117 DGQLGLGHCDKSTYFHLLRPFCDWAP----------IKMLSAGCNTSAALTEDGRLFMWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +V ++ F +   A  P  +        V CG  H+  +T  G LYT+G + NG LG+ 
Sbjct: 167 DNSVGQIAFGDEGFAAEPREVHVGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQ 226

Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
              + +   P++VQG      V +V CG +HT  ++E  + T+G G              
Sbjct: 227 KEQLANHRVPQQVQGVLGH--VTRVCCGGEHTVVLTEKNVYTFGRG------------QY 272

Query: 382 GQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLGHG  +  +H P  +    N K   ++CG NHT  + +
Sbjct: 273 GQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVTD 313



 Score =  124 bits (311), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 105/347 (30%), Positives = 157/347 (45%), Gaps = 29/347 (8%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
           K ++CGG H+  +TE G +   G N +GQLG+      + +P  +  LK E V+++  G 
Sbjct: 39  KHMSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPS-ARKPTSVKALKSEKVKLAACGR 97

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T  G +Y  G N +GQLGLG           +  C      K  + G   S A+
Sbjct: 98  DHTIVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFC-DWAPIKMLSAGCNTSAAL 156

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++  WG    G++  G E    GF        PR +    G  V   + G+ HSA 
Sbjct: 157 TEDGRLFMWGDNSVGQIAFGDE----GFAAE-----PREVH--VGEAVIWVSCGYKHSAF 205

Query: 253 IDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +   GR+Y FG+ A  ++  Q+    NH     +   L +   V CGG HT VLT    +
Sbjct: 206 VTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVTRVCCGGEHTVVLTE-KNV 264

Query: 310 YTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           YT+G  + G LG G+ +  +H P+ +Q  F  S V  ++CG  HTA +++  +L     G
Sbjct: 265 YTFGRGQYGQLGHGTFLFEVHLPKALQH-FCNSKVRHIACGENHTAVVTDSGLLYTFGDG 323

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            HG            LG  N ++   PT+           VSCG +H
Sbjct: 324 RHGKLG---------LGEENFINQFSPTLCTRFLQYAVQSVSCGGHH 361



 Score =  108 bits (270), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 93/326 (28%), Positives = 147/326 (45%), Gaps = 28/326 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G   +G+LGL    S  +P    A +   +K  ACG  HT+  T  G VY+ G N  G
Sbjct: 59  MFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSVYSAGSNQDG 118

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+   +       LR       +  +S G + S+A+T DG L+MWG NS GQ+  G +
Sbjct: 119 QLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQIAFGDE 178

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                P    V    G      + G++ S  VT  G++ ++G   +GRLG  +E      
Sbjct: 179 GFAAEPREVHV----GEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKE------ 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +  +   P+ ++ + G   ++   G  H+  + E   VY FG     ++     LF+  
Sbjct: 229 -QLANHRVPQQVQGVLGHVTRVCCGG-EHTVVLTEKN-VYTFGRGQYGQLGHGTFLFE-- 283

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SP 331
                P  +     S+   + CG  HT V+T  G LYT+G   +G LG+G  + ++  SP
Sbjct: 284 --VHLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSP 341

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS 357
                 F +  V  VSCG  H   ++
Sbjct: 342 TLCT-RFLQYAVQSVSCGGHHMLVLA 366



 Score =  102 bits (255), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 141/267 (52%), Gaps = 17/267 (6%)

Query: 44  GNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G+   G+LGLG  + S +  ++    +   +K L+ G   +  LTE G ++  G N  GQ
Sbjct: 113 GSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDGRLFMWGDNSVGQ 172

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +   +  G++ EP  +  + + V+ +S GY HS+ +TV G LY +G+++NG+LGL K+  
Sbjct: 173 IAFGDE-GFAAEPREVH-VGEAVIWVSCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQL 230

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               +P +V+ + G  T+    G E +V +T    V ++G G  G+LGHG       FL 
Sbjct: 231 ANHRVPQQVQGVLGHVTR-VCCGGEHTVVLTEK-NVYTFGRGQYGQLGHGT------FLF 282

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               + P+ ++     KV+  A G  H+A + ++G +Y FGD    K+   E N   +  
Sbjct: 283 EV--HLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFS 340

Query: 281 PSLISK-LPYS-EEVVCGGYHTCVLTS 305
           P+L ++ L Y+ + V CGG+H  VL +
Sbjct: 341 PTLCTRFLQYAVQSVSCGGHHMLVLAT 367


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 144/310 (46%), Gaps = 32/310 (10%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            +K    +S G+ H++ ITVDGEL+ WG N++GQLG G  A K    P +VE L       
Sbjct: 1193 EKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMM 1252

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             +LG E +V +     + SWG G  G+LGHG          ST    P+ I+E  G K+ 
Sbjct: 1253 MSLGGEHTVVIDRSFHIYSWGNGKYGQLGHG---------VSTPHNLPKRIEEFAGQKIS 1303

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEE-------- 292
              A G+ H+  +   G ++ FG     ++ L    +H   P+ ++               
Sbjct: 1304 SIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTRVTG 1363

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
            + CG  H+ + TS G++Y++G+N  G LG GS +    P+ +QG      + +++CG  H
Sbjct: 1364 IFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQG-LKGKNIKRITCGPYH 1422

Query: 353  TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            T   ++   +  WG G                LG G++ + + P +V    N +  +V C
Sbjct: 1423 TVVTTDLDSVYCWGQGEHMC------------LGTGSNKNELVPKLVELFVNKRVERVVC 1470

Query: 412  GFNHTGALLE 421
            G  HT  L +
Sbjct: 1471 GLYHTATLTQ 1480



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 179/398 (44%), Gaps = 78/398 (19%)

Query: 43   WGNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WGN   G+LG  L + + +  P+   + ++  +  ++ GG HT+ +  +  +Y+ G   +
Sbjct: 1218 WGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY 1277

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG   +  ++L P RI     +++  I+TGY H+  +   G+L+ +G N +GQLGL  
Sbjct: 1278 GQLGHGVSTPHNL-PKRIEEFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLND 1336

Query: 160  KAAKVIPIPTKVEC-----------LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                 +PIPT+V             ++GIF      G   SV  T  G V S+GA   G+
Sbjct: 1337 LKHH-LPIPTRVNTADIHHAGQPTRVTGIFC-----GHSHSVLRTSHGDVYSFGANAKGQ 1390

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG   S            P+LI+ L+G  +K    G  H+    +   VY +G     
Sbjct: 1391 LGHGSTESC---------RYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWG----- 1436

Query: 269  KMLFQEGNH------ARRPSLISKL------PYSEEVVCGGYHTCVLT-------SGGEL 309
                 +G H      + +  L+ KL         E VVCG YHT  LT       +GG +
Sbjct: 1437 -----QGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNV 1491

Query: 310  YTWGSNENGCLGIG------SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
            Y  GS+E+G LGIG      S+D  + P  +    S + VD  S    +    S G +  
Sbjct: 1492 YICGSSEHGKLGIGGDPRSPSLDKAY-PAIIPSINSANVVDLASGAEFNALITSNGALYM 1550

Query: 364  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
            WG  G+H           GQ+G+G + D   PT V+  
Sbjct: 1551 WG-AGTH-----------GQIGNGKNQDTWIPTRVSLS 1576



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 150/346 (43%), Gaps = 18/346 (5%)

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISG 120
            P+    F +   K+++CG  H   +T  G ++  G N  GQLG     G +   P+R+  
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES 1244

Query: 121  LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            LK+  ++ +S G  H+  I     +Y WG    GQLG G        +P ++E  +G   
Sbjct: 1245 LKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH--NLPKRIEEFAGQKI 1302

Query: 180  KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
               A G+  ++ +  GG + ++G+   G+LG       L     T   T  +    +  +
Sbjct: 1303 SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPI--PTRVNTADIHHAGQPTR 1360

Query: 240  VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG 297
            V     G  HS     +G VY FG  A  ++        R P LI  L     + + CG 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            YHT V T    +Y WG  E+ CLG GS      P+ V+  F    V++V CG  HTA ++
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVEL-FVNKRVERVVCGLYHTATLT 1479

Query: 358  EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-----VDYIHPTIV 398
            +      G   + G     G S  G+LG G D     +D  +P I+
Sbjct: 1480 Q----PMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAII 1521



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 66/142 (46%), Gaps = 16/142 (11%)

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPF 338
            P+L     +++ V CG  H  V+T  GEL+TWG+N +G LG G     H  +P RV+   
Sbjct: 1187 PALRFNEKHAKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVES-L 1245

Query: 339  SESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             ++P+  +S G +HT  I     I +WG G              GQLGHG    +  P  
Sbjct: 1246 KQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKY------------GQLGHGVSTPHNLPKR 1293

Query: 398  VNFGENVKALQVSCGFNHTGAL 419
            +      K   ++ G+ HT  L
Sbjct: 1294 IEEFAGQKISSIATGYWHTLVL 1315


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 138/289 (47%), Gaps = 19/289 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG GS   R  PV     +   + A+A G  H+L L   G V+A G ND+GQ
Sbjct: 197 WGNNGYGQLGNGSTAHRATPVQVPGLQ--GVVAVAGGYMHSLALCADGTVWAWGFNDYGQ 254

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +S  P+ + GL  +VV ++ G  HS A+  DG ++ WG N  GQLG      
Sbjct: 255 LGNGTTV-HSPTPVPVPGLS-QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQ 312

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P   +VE L  +     A GF  S+AV  GG + SWG   SG+LG+G  SS      
Sbjct: 313 RTKP--GRVEGLREVVA--VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSS------ 362

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  ++ L    V   AAG +HS  +  +G V+ +G     ++  +       P 
Sbjct: 363 ---SARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAWGRNEEGQLGHERAPERATPV 417

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            +  L     V  G YH+  + +GG L+ WG N+ G LG     ++  P
Sbjct: 418 RVPGLQGEVAVAAGFYHSLSVQAGGSLWAWGLNDFGQLGDSEAPLMPVP 466



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 164/364 (45%), Gaps = 43/364 (11%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S+ R     A ++  ++A+A G  ++L L   G V+A G N  GQLG       S  P  
Sbjct: 110 SKHRATPAQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARS-APRP 168

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           + GL + V  ++ G  H+ A+  DG ++ WG N  GQLG G  A +  P+  +V  L G+
Sbjct: 169 VPGLSRAVA-VAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPV--QVPGLQGV 225

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
                A G+  S+A+   G V +WG    G+LG+G          +    TP  +  L  
Sbjct: 226 VA--VAGGYMHSLALCADGTVWAWGFNDYGQLGNGT---------TVHSPTPVPVPGLSQ 274

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V +AA GF HS  +  +G V+ +G+    ++         +P  +  L     V  G 
Sbjct: 275 V-VSVAAGGF-HSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGF 332

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
           YH+  + +GG L++WG+N +G LG GS      P  VQG      V  V+ G  H+ A+ 
Sbjct: 333 YHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQG---LGAVTSVAAGGMHSVAVQ 389

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCG 412
           ++G +  W            G +  GQLGH    +   P        V  LQ    V+ G
Sbjct: 390 ADGTVWAW------------GRNEEGQLGHERAPERATPV------RVPGLQGEVAVAAG 431

Query: 413 FNHT 416
           F H+
Sbjct: 432 FYHS 435


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 166/397 (41%), Gaps = 41/397 (10%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
            R   + LQ R A  WG    G+LG G+ E R  PV  S     +  +LA G  HT  L 
Sbjct: 435 DRHTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGLSGAT--SLAAGDGHTCALM 492

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
                   G N  GQLG        L P+ +SGL      ++ G  H+ A+     +  W
Sbjct: 493 NVRTAQCWGRNSSGQLG-DGTTERRLTPVTVSGLSAATA-LAAGDSHTCALLDTRRVRCW 550

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+NS+GQLG G +  +V P+   V  LSG      A G   +  +   G V  WG   SG
Sbjct: 551 GRNSSGQLGDGTRTDRVTPV--AVSGLSGA--TALAAGNSHTCTLLDTGTVQCWGWNSSG 606

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G           T   TP  +  L GV     AAG  H+  + ++G V  +G  + 
Sbjct: 607 QLGDGTR---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSS 655

Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   +G    R  P+ +S L     +  G  HTC L   G +  WG N +G LG G+ 
Sbjct: 656 GQL--GDGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTT 713

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
               +P  V G    S V  +  G  HT A+   G +  WG             +  GQL
Sbjct: 714 TDRVTPAAVSG---LSGVTALVAGANHTCALMPTGTVQCWG------------KNEFGQL 758

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G   D + P  V+    + AL  + G  HT A+L 
Sbjct: 759 GDGTTTDRLTPVAVSGLSGITAL--AAGSEHTCAVLN 793



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 167/391 (42%), Gaps = 43/391 (10%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ      WG  ++G+LG G+ E R  PVV S     +  AL  G  HT  + +T     
Sbjct: 392 LQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGAT--ALTAGDRHTCAVLQTRTAQC 449

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        L P+ +SGL      ++ G  H+ A+        WG+NS+GQ
Sbjct: 450 WGENSPGQLG-DGTTERRLTPVTVSGLSG-ATSLAAGDGHTCALMNVRTAQCWGRNSSGQ 507

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           LG G    ++ P+      +SG+    A A G   + A+    +V  WG   SG+LG G 
Sbjct: 508 LGDGTTERRLTPVT-----VSGLSAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGT 562

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                     T   TP  +  L G      AAG  H+  + + G V  +G  +  ++   
Sbjct: 563 R---------TDRVTPVAVSGLSGATAL--AAGNSHTCTLLDTGTVQCWGWNSSGQL--G 609

Query: 274 EGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +G    R  P+ +S L     +  G  HTC L   G +  WG N +G LG G+     +P
Sbjct: 610 DGTRTDRVTPAAVSGLSGVTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTRTDRVTP 669

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V G    S V  ++ G  HT A+ + G +  WG             +S GQLG G   
Sbjct: 670 AAVSG---LSGVTALAAGANHTCALMDSGTVQCWG------------RNSSGQLGDGTTT 714

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           D + P  V+    V AL    G NHT AL+ 
Sbjct: 715 DRVTPAAVSGLSGVTALVA--GANHTCALMP 743



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 170/396 (42%), Gaps = 39/396 (9%)

Query: 28  KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
            R   + L  R    WG  ++G+LG G+   RW PV  S      + ALA GG HT    
Sbjct: 185 DRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLS--GVTALAAGGRHTCAAL 242

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
            TG V   G N  GQLG        L P+ +SGL      ++ G+ H+ A+   G +  W
Sbjct: 243 NTGTVQCWGGNGAGQLGDGTRTSR-LTPMAVSGLSGATA-LAAGFEHTCALLDTGTVRCW 300

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G NS+GQLG G    ++ P+   V  LSG+ T  AA  F  + AV     V  WG   SG
Sbjct: 301 GLNSSGQLGDGTTERRLTPV--AVSGLSGV-TALAAGDF-HTCAVLQTETVQCWGLNSSG 356

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G     L         TP  +  L G      AAG +H+  + + G V  +G    
Sbjct: 357 QLGDGTTERRL---------TPVSVSGLSGSTAL--AAGGVHTCALLQTGTVQCWGRNEF 405

Query: 268 DKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   +G   RR  P ++S L  +  +  G  HTC +        WG N  G LG G+ 
Sbjct: 406 GQL--GDGTTERRLTPVVVSGLSGATALTAGDRHTCAVLQTRTAQCWGENSPGQLGDGTT 463

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
           +   +P  V G    S    ++ G  HT A+   +           T    G +S GQLG
Sbjct: 464 ERRLTPVTVSG---LSGATSLAAGDGHTCALMNVR-----------TAQCWGRNSSGQLG 509

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G     + P  V+      AL  + G +HT ALL+
Sbjct: 510 DGTTERRLTPVTVSGLSAATAL--AAGDSHTCALLD 543



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 146/332 (43%), Gaps = 23/332 (6%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           +  R A  WG    G+LG G+ E R  PV  S     +  ALA G +HT  L +T  V  
Sbjct: 492 MNVRTAQCWGRNSSGQLGDGTTERRLTPVTVSGLSAAT--ALAAGDSHTCALLDTRRVRC 549

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        + P+ +SGL      ++ G  H+  +   G +  WG NS+GQ
Sbjct: 550 WGRNSSGQLGDGTRTDR-VTPVAVSGLSGATA-LAAGNSHTCTLLDTGTVQCWGWNSSGQ 607

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +  +V P    V  LSG+     A G   + A+   G V  WG   SG+LG G  
Sbjct: 608 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTR 663

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                    T   TP  +  L GV     AAG  H+  + ++G V  +G  +  ++    
Sbjct: 664 ---------TDRVTPAAVSGLSGVTAL--AAGANHTCALMDSGTVQCWGRNSSGQLGDGT 712

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P+ +S L     +V G  HTC L   G +  WG NE G LG G+     +P  V
Sbjct: 713 TTDRVTPAAVSGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRLTPVAV 772

Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            G    S +  ++ G +HT A+ + G    WG
Sbjct: 773 SG---LSGITALAAGSEHTCAVLNTGAARCWG 801



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 167/382 (43%), Gaps = 41/382 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV  S      + ALA G  HT  L  TG V   GLN  GQ
Sbjct: 100 WGWNGSGQLGDGTTTDRAMPVAVSGLS--GVTALAAGRYHTCALLNTGTVQCWGLNSSGQ 157

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   + P+ +SGL   V+ ++ G  H+ A+     +  WG+N +GQLG G    
Sbjct: 158 LG-DWTITNRVTPVAVSGLSG-VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTND 215

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  LSG+     A G   + A    G V  WG  G+G+LG G          
Sbjct: 216 RWTPV--AVSGLSGV--TALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTR-------- 263

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
            TS  TP  +  L G      AAGF H+  + + G V  +G  +  ++   +G   RR  
Sbjct: 264 -TSRLTPMAVSGLSGATAL--AAGFEHTCALLDTGTVRCWGLNSSGQL--GDGTTERRLT 318

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     +  G +HTC +     +  WG N +G LG G+ +   +P  V G    
Sbjct: 319 PVAVSGLSGVTALAAGDFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSVSGLSGS 378

Query: 341 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           +    ++ G  HT A+ + G +  W            G +  GQLG G     + P +V+
Sbjct: 379 T---ALAAGGVHTCALLQTGTVQCW------------GRNEFGQLGDGTTERRLTPVVVS 423

Query: 400 FGENVKALQVSCGFNHTGALLE 421
                 AL  + G  HT A+L+
Sbjct: 424 GLSGATAL--TAGDRHTCAVLQ 443



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 166/382 (43%), Gaps = 39/382 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++ +R  PV  S      + ALA G  HT  L +T  V   G N+ GQ
Sbjct: 150 WGLNSSGQLGDWTITNRVTPVAVSGLS--GVIALAAGDRHTCALLDTRTVRCWGENEHGQ 207

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+ +SGL   V  ++ G  H+ A    G +  WG N  GQLG G + +
Sbjct: 208 LG-DGTTNDRWTPVAVSGLSG-VTALAAGGRHTCAALNTGTVQCWGGNGAGQLGDGTRTS 265

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+   V  LSG      A GFE + A+   G V  WG   SG+LG G     L    
Sbjct: 266 RLTPM--AVSGLSGA--TALAAGFEHTCALLDTGTVRCWGLNSSGQLGDGTTERRL---- 317

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
                TP  +  L GV     AAG  H+  + +   V  +G  +  ++   +G   RR  
Sbjct: 318 -----TPVAVSGLSGVTAL--AAGDFHTCAVLQTETVQCWGLNSSGQL--GDGTTERRLT 368

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L  S  +  GG HTC L   G +  WG NE G LG G+ +   +P  V G    
Sbjct: 369 PVSVSGLSGSTALAAGGVHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSG---L 425

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           S    ++ G +HT A+ + +           T    G +S GQLG G     + P  V+ 
Sbjct: 426 SGATALTAGDRHTCAVLQTR-----------TAQCWGENSPGQLGDGTTERRLTPVTVSG 474

Query: 401 GENVKALQVSCGFNHTGALLEY 422
                +L  + G  HT AL+  
Sbjct: 475 LSGATSL--AAGDGHTCALMNV 494



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 128/300 (42%), Gaps = 19/300 (6%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           L  R    WG    G+LG G+   R  PV  S     +  ALA G +HT  L +TG V  
Sbjct: 542 LDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSGAT--ALAAGNSHTCTLLDTGTVQC 599

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG        + P  +SGL   V  ++ G +H+ A+   G +  WG+NS+GQ
Sbjct: 600 WGWNSSGQLGDGTRTDR-VTPAAVSGLSG-VTALAAGANHTCALMDSGTVQCWGRNSSGQ 657

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G +  +V P    V  LSG+     A G   + A+   G V  WG   SG+LG G  
Sbjct: 658 LGDGTRTDRVTPA--AVSGLSGV--TALAAGANHTCALMDSGTVQCWGRNSSGQLGDGT- 712

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   +T   TP  +  L GV   +A A   H+  +   G V  +G     ++    
Sbjct: 713 --------TTDRVTPAAVSGLSGVTALVAGAN--HTCALMPTGTVQCWGKNEFGQLGDGT 762

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P  +S L     +  G  HTC + + G    WG N  G LGI  +D    P  V
Sbjct: 763 TTDRLTPVAVSGLSGITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPLDYSPLPRTV 822



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 173/412 (41%), Gaps = 57/412 (13%)

Query: 15  KQDIKLGSKL--GICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           K+ +KL   L  G+   WI ST           G  GRL     ++   P+  S      
Sbjct: 34  KRPVKLDRYLYPGVAHTWIDST-----------GSEGRLMTNPGKAPASPLPLS-----R 77

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + ALA G  HT  L  TG V+  G N  GQLG       ++ P+ +SGL   V  ++ G 
Sbjct: 78  VIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAM-PVAVSGLSG-VTALAAGR 135

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+   G +  WG NS+GQLG      +V P+   V  LSG+    A  G   + A+
Sbjct: 136 YHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPV--AVSGLSGVIALAA--GDRHTCAL 191

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
                V  WG    G+LG G          +   +TP  +  L GV     AAG  H+  
Sbjct: 192 LDTRTVRCWGENEHGQLGDGT---------TNDRWTPVAVSGLSGVTAL--AAGGRHTCA 240

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
               G V  +G     ++   +G    R  P  +S L  +  +  G  HTC L   G + 
Sbjct: 241 ALNTGTVQCWGGNGAGQL--GDGTRTSRLTPMAVSGLSGATALAAGFEHTCALLDTGTVR 298

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGS 369
            WG N +G LG G+ +   +P  V G    S V  ++ G  HT A+ + + +  WG    
Sbjct: 299 CWGLNSSGQLGDGTTERRLTPVAVSG---LSGVTALAAGDFHTCAVLQTETVQCWGL--- 352

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +S GQLG G     + P  V+      AL  + G  HT ALL+
Sbjct: 353 ---------NSSGQLGDGTTERRLTPVSVSGLSGSTAL--AAGGVHTCALLQ 393


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 155/333 (46%), Gaps = 33/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 329 WGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 388

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 389 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 447

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P ++E L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 448 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 505

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L+       A G   +  +   G VY  G   
Sbjct: 506 GRLGHGDKESKL---------VPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGS-C 555

Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           V   L       + P+ +  KL  S  EE+ CG YH  VLTS  E++TWG   NGCLG G
Sbjct: 556 VYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHG 615

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             +  ++P  V+    +  V  ++CG   TAAI
Sbjct: 616 DTNDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 647



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 177/370 (47%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++ +   P  I  L    ++ ++
Sbjct: 307 VQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 363

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 364 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSSISCGP 421

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR I+ L+G++   AA G
Sbjct: 422 WHTAVVTSSGQLFTFGDGTFGVLGHGDRKSV---------SLPREIESLKGLRTVQAACG 472

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ +  L  P  
Sbjct: 473 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKESKLVPTRVVTLDEPNF 530

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  L+  G +YT GS   G LG    D    P  V+G  S+S V++++CG 
Sbjct: 531 CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADG-KLPTPVEGKLSKSFVEEIACGA 589

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G LGHG+  D   PT+V   ++ +   +
Sbjct: 590 YHVAVLTSRTEVFTWGKGAN------------GCLGHGDTNDRNTPTLVEALKDKQVKSI 637

Query: 410 SCGFNHTGAL 419
           +CG N T A+
Sbjct: 638 ACGTNFTAAI 647



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 121/271 (44%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G E +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 295 LPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVP-------- 346

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 347 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 405

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  ++      
Sbjct: 406 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLR 465

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V Q +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 466 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGD 512

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V   +     QV+CG + T AL
Sbjct: 513 KESKLVPTRVVTLDEPNFCQVACGHSMTVAL 543



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G  +  ++     +    P LI  L 
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+      P+RV GP     V 
Sbjct: 356 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 415

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  +   + 
Sbjct: 416 SISCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDRKSVSLPREIESLKG 463

Query: 404 VKALQVSCGFNHTGALLEYV 423
           ++ +Q +CG  HT A++E +
Sbjct: 464 LRTVQAACGVWHTAAVVEVM 483


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3842 GYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 3901

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 3902 KLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 3961

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  +E L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 3962 DQL--TPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4013

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4014 ---SDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVR 4070

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    T  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4071 RPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4129

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4130 LQGKKITRVACGSAHTLAWSTMK 4152



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 153/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2907

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   +I    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 2908 KLGHGNSISLD-KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 2966

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A +    P  V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 2967 ATQ--SKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRGG----- 3019

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP LI  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3020 ----SDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3075

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3076 RKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVNKKPSLVHE 3135

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3136 -LDDARVNRVSCGSSHSIA 3153



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 176/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3789 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3847

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3848 RLGIGGTDSVMVPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 3905

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 3906 GNRLS--YDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 3959

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+LI+ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 3960 -----SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4014

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4015 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRK 4074

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A ++ G++ TWG             +  GQLG G     
Sbjct: 4075 VAA-LQGKKIISIATGSLHCVACTDKGEVFTWG------------DNDEGQLGDGTTSAL 4121

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4122 QRPRLVHALQGKKITRVACGSAHTLA 4147



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 189/393 (48%), Gaps = 37/393 (9%)

Query: 36   QRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGCVY 93
            Q     +WG  D  +LG G   S+ + PV      K     +A GG+ TLF+ ++ G +Y
Sbjct: 2788 QHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPVHIA-GGSKTLFVVSQEGKLY 2845

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKN 150
            A G    G+LG+ ++     EP  I  L + V++   + +G  H+ A+T DG+++ WG+ 
Sbjct: 2846 ACGEGTNGRLGLGDDSNVC-EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG 2904

Query: 151  SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             +G+LG G   +  +  P  +E L     +  A G   S A+T  G++ +WG G  GRLG
Sbjct: 2905 EDGKLGHGNSIS--LDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGRLG 2962

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVD 268
            HG          + ++  P+L++ L G +V   A G     +  +  +G VY +GD    
Sbjct: 2963 HGD---------TATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFG 3013

Query: 269  KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            K+     +    P LI +L      ++ CG   +  LT  GE++TWG  +   LG G+  
Sbjct: 3014 KLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDH 3073

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P  V+G      +  V+ G  H  A+++ G++  WG         ++ H   GQ G
Sbjct: 3074 HVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDIGQVYAWG---------DNDH---GQQG 3120

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            +G  +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3121 NGTTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3153



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 164/350 (46%), Gaps = 57/350 (16%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG          +   +   L+P+ I+G  K +  +S           +
Sbjct: 2792 VYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQ----------E 2841

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG  +    P P  +  LS    K+ A+  G + ++A+T  GKV 
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGKVF 2899

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG          S S   PRLI+ L+  +++  A G  HSA I  +G +
Sbjct: 2900 SWGEGEDGKLGHGN---------SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGEL 2950

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L+  L      ++ CG     T  LT+ G +Y+WG  
Sbjct: 2951 YTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDG 3010

Query: 316  ENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
            + G LG G  D  ++P   +R+ G      V Q+ CG + + A+++ G++ TWG G    
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF- 3065

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3066 -----------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3842

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 3843 YGAVGRLGIG--GTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 3900

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 3901 GKLGHGNR---LSYDR------PKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGR 3951

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P LI  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 3952 YGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4011

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G  D    P +++   +   V +V CG + + A++  G I TWG G  H           
Sbjct: 4012 GGSDGCKIPMKIES-LAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYH----------- 4059

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4060 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4095



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 132/279 (47%), Gaps = 24/279 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAI 138
           G H L LT+   VY+ G  + G+LG   N+ +  EP  I  L +K +  I+ G  +S+A+
Sbjct: 511 GTHYLALTQDNSVYSWGNGECGRLG-HGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL 569

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG---FEQSVAVTGG 195
           + +GELY WG+ + G+LG G     V+ IPT V  L+G      A G     Q++ VT  
Sbjct: 570 SSNGELYTWGRGNYGKLGHGNSDKDVM-IPTLVTALNGHMVVYVACGGGRDPQTLCVTAS 628

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG G  G+LG G               TP+++ +L  + V     G   SA +  
Sbjct: 629 GIVFSWGDGNHGKLGRGG---------CDGSKTPKIVDKLLDINVAKVYCGQQFSAALTA 679

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
            G VY +G     K+     +H R P +I  L     +++  G  H   LT    +Y WG
Sbjct: 680 YGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739

Query: 314 SNENGCL--GIGSIDVLHSPERVQGP-FSESPVDQVSCG 349
            N++G +   +G+I     PE    P FS   V  ++CG
Sbjct: 740 RNDHGQIDPALGTI----VPEPTLCPTFSGKNVIGLACG 774



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 132/286 (46%), Gaps = 31/286 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N   QLG G K +K I +P   E LS +     A G +    V+  GK+ + G 
Sbjct: 2792 VYVWGLNDKDQLG-GLKGSK-IKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGE 2849

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G +S++           P+ I  L    +K  A  +G  H+  + ++G+V+ 
Sbjct: 2850 GTNGRLGLGDDSNVC---------EPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFS 2900

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  E G 
Sbjct: 2901 WGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEYGR 2960

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSED 376
            LG G       P+ VQ    +  V Q++CG +     A  ++G + +WG     G F   
Sbjct: 2961 LGHGDTATQSKPKLVQSLVGQR-VIQIACGSRDAQTMALTADGLVYSWG----DGDF--- 3012

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
                 G+LG G       P +++    +  +Q+ CG   + AL +Y
Sbjct: 3013 -----GKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKY 3053



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 130/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +P   E LS +   Q   G +   AVT  GKV + 
Sbjct: 3784 GAIYGWGHNHRGQLG-GLEGAKV-KLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYAT 3841

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   S++          P L++ ++ V VK  A  +G  H   +   G V
Sbjct: 3842 GYGAVGRLGIGGTDSVM---------VPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP LI +L  +E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRY 3952

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  +   +P+ ++    +  V  V+CG     T  +++   + W WG        
Sbjct: 3953 GRLGHGDSEDQLTPKLIEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWG-------- 4002

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  +     +  ++V CG   + AL
Sbjct: 4003 DGDY--GKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4044



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 109/229 (47%), Gaps = 23/229 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG+ GRLG G++     P +  A  + ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 526 WGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGK 585

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTG---YHHSSAITVDGELYMWGKNSNGQLGL- 157
           LG   +    + P  ++ L    VV ++ G      +  +T  G ++ WG  ++G+LG  
Sbjct: 586 LGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRG 645

Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G K  K+      V+ L  I   +   G + S A+T  G+V +WG G   +LGHG E
Sbjct: 646 GCDGSKTPKI------VDKLLDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNE 699

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P++I  L+  K+K    G LH   + E+  VY +G
Sbjct: 700 DHV---------RYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWG 739



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 110/241 (45%), Gaps = 33/241 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG           T    P+LI+ L    +   A G  +
Sbjct: 515 LALTQDNSVYSWGNGECGRLGHGN---------MTWYDEPKLIEALVEKNITFIACGSTY 565

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR---PSLISKLP--YSEEVVCGG---YHTC 301
           SA +  NG +Y +G     K+    GN  +    P+L++ L       V CGG     T 
Sbjct: 566 SAALSSNGELYTWGRGNYGKL--GHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQTL 623

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
            +T+ G +++WG   +G LG G  D   +P ++     +  V +V CG + +AA++  G+
Sbjct: 624 CVTASGIVFSWGDGNHGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGQQFSAALTAYGE 682

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G  +            +LGHGN+    +P I++  +  K   +  G  H  AL 
Sbjct: 683 VYTWGKGEDY------------KLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALT 730

Query: 421 E 421
           E
Sbjct: 731 E 731



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG G E + +          P L + L  ++      G      +
Sbjct: 3782 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 3832

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  AV ++     +    P+L+  + +       V  GG H   L+S G +
Sbjct: 3833 TADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 3892

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
            Y+WG  ++G LG G+      P+ ++       VD ++CG  H+AAI S G + TWG G 
Sbjct: 3893 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-IACGGHHSAAITSAGWLYTWGKG- 3950

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P ++   ++ K + V+CG
Sbjct: 3951 -----------RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG 3983



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 20/171 (11%)

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            ++  VY++G    D++   +G+  + P     L   + V + GG  T  V++  G+LY  
Sbjct: 2788 QHSAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYAC 2847

Query: 313  GSNENGCLGIGSIDVLHSPERVQGPF-SESPVDQVSC--GWKHTAAIS-EGKILTWGWGG 368
            G   NG LG+G    +  P+ +  PF S+  + +V+   G KH  A++ +GK+ +WG G 
Sbjct: 2848 GEGTNGRLGLGDDSNVCEPKPI--PFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG- 2904

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  EDG     +LGHGN +    P ++   ++ +   ++CG  H+ A+
Sbjct: 2905 ------EDG-----KLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAI 2944



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 16/134 (11%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG--- 349
           + CG  ++  L+S GELYTWG    G LG G+ D       +    +   V  V+CG   
Sbjct: 559 IACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGR 618

Query: 350 -WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             +     + G + +WG  G+HG           +LG G       P IV+   ++   +
Sbjct: 619 DPQTLCVTASGIVFSWG-DGNHG-----------KLGRGGCDGSKTPKIVDKLLDINVAK 666

Query: 409 VSCGFNHTGALLEY 422
           V CG   + AL  Y
Sbjct: 667 VYCGQQFSAALTAY 680



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 30/61 (49%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+  +LG G+ +    P +    +   +K L  G  H L LTE   VY  G ND GQ
Sbjct: 686 WGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQ 745

Query: 103 L 103
           +
Sbjct: 746 I 746


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 178/368 (48%), Gaps = 48/368 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CGG H   +++ G +Y+ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 315 VQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-HPKLIDALTHMNIELVACG 373

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
            +H+ A+T+ G+LY WG  +   G LG G   +  +P   K+   L GI     + G   
Sbjct: 374 EYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVP--KKLHGPLEGIHVSSISCGPFH 431

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +V VT  G++ ++G G  G LGHG   S+           P+ ++ L+G++   AA G  
Sbjct: 432 TVIVTSAGQLFTFGDGSFGVLGHGDRESL---------SVPKEVESLKGLRTVRAACGVW 482

Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEE 292
           H+A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +
Sbjct: 483 HTAAVVEVMAGNSSSSNCSSGKIFTWGDG--DKGRLGHGDKESRLVPTCVAALVEPNFCQ 540

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG  H
Sbjct: 541 VACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGM-LPARVEGKLHKNFVEEISCGAYH 599

Query: 353 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            A + S  ++ TWG G +            G+LGHGN  D   PT+V   ++ +   V C
Sbjct: 600 VAVLTSRTEVYTWGKGAN------------GRLGHGNTDDKNTPTLVEALKDKQVRNVVC 647

Query: 412 GFNHTGAL 419
           G N T A+
Sbjct: 648 GTNFTAAI 655



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 31/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G   F
Sbjct: 337 WGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKF 396

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P ++ G  +   V  IS G  H+  +T  G+L+ +G  S G LG G
Sbjct: 397 GLLGHGNDISHWV-PKKLHGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG 455

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 456 DRES--LSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK 513

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 514 GRLGHGDKESRL---------VPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAV 564

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL   + EE+ CG YH  VLTS  E+YTWG   NG LG G+
Sbjct: 565 YGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGN 624

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            D  ++P  V+    +  V  V CG   TAAI
Sbjct: 625 TDDKNTPTLVEA-LKDKQVRNVVCGTNFTAAI 655



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 118/271 (43%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  + G + +  V+  G++ SWG    GRLGHG +  +         
Sbjct: 303 VPKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVA-------- 354

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSL 283
             P+LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN   H     L
Sbjct: 355 -HPKLIDALTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKL 413

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              L   +   + CG +HT ++TS G+L+T+G    G LG G  + L  P+ V+      
Sbjct: 414 HGPLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLR 473

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GKI TWG G              G+LGHG+
Sbjct: 474 TV-RAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDK------------GRLGHGD 520

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG   T AL
Sbjct: 521 KESRLVPTCVAALVEPNFCQVACGHCLTVAL 551



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H+A + + G +Y +G+ +  ++          P LI  L 
Sbjct: 304 PKPLEFAVRLDVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALT 363

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLH-SPERVQGPFSESPV 343
           +   E V CG YHTC +T  G+LYTWG    + G LG G+ D+ H  P+++ GP     V
Sbjct: 364 HMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-DISHWVPKKLHGPLEGIHV 422

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HT  + S G++ T+G G            S G LGHG+      P  V   +
Sbjct: 423 SSISCGPFHTVIVTSAGQLFTFGDG------------SFGVLGHGDRESLSVPKEVESLK 470

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 471 GLRTVRAACGVWHTAAVVEVM 491


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+    P +V+    +  V  ++CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++ + G++  G LG  + D    P  V+   +   V QV+CG  H A +
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDG-RLPCLVEDRIAGEHVLQVACGSYHVAVL 366

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +   ++ TWG G +            G+LGHG+  D   PT V   ++     ++CG N 
Sbjct: 367 TGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVRHIACGANF 414

Query: 416 TGAL 419
           T A+
Sbjct: 415 TAAI 418



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G     PV  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNLT 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 138/282 (48%), Gaps = 17/282 (6%)

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EV 125
           A +  ++ A++CG AHTL L + G VYA GL+  GQLG+         P  I  L   ++
Sbjct: 29  ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           VQ+S GY+HS A++   E++ WG+N  GQLGLG +  K    P  ++ L GI   Q A G
Sbjct: 89  VQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTS-PQLIKSLLGIPFMQIAAG 147

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S  +T  G +  WG    G+LG   E+           Y P L+K L   K+     
Sbjct: 148 GAHSFVLTLSGAIFGWGRNKFGQLGLNDEN---------DRYVPNLLKSLRSQKIVYICC 198

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CV 302
           G  H+A + + G V+ FG     ++     +H   P  + +L  S   +V CG  HT   
Sbjct: 199 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAF 258

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSES 341
           + S G +Y++G   NG LG GS     SP  V+G   P+SE 
Sbjct: 259 VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQ 300



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 110 WGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFG 169

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+++     +  L  S   +++V I  G  H++A+T +G ++ +G    GQLG    +
Sbjct: 170 QLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTS 229

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLGHGQESS 216
            ++   P KV  L G    Q A G + + A V   G++ S+G GG+G+LG G  S+
Sbjct: 230 HEI--NPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSN 283



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 29/242 (11%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLG-HGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           G   ++A+   G+V +WG    G+LG  G E  I           PR IK L  +++   
Sbjct: 41  GDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECI---------RVPRNIKSLSDIQIVQV 91

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G+ HS  + +   V+ +G     ++ L  E      P LI  L   P+ + +  GG H
Sbjct: 92  SCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQ-IAAGGAH 150

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           + VLT  G ++ WG N+ G LG+   +  + P  ++   S+  V  + CG  HTAA++ E
Sbjct: 151 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV-YICCGEDHTAALTKE 209

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G + T+G GG             GQLGH +    I+P  V         QV+CG  HT A
Sbjct: 210 GGVFTFGAGGY------------GQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSA 257

Query: 419 LL 420
            +
Sbjct: 258 FV 259



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 44/170 (25%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           V CG  HT  L   G++Y WG + +G LG+ G+ + +  P  ++   S+  + QVSCG+ 
Sbjct: 38  VSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKS-LSDIQIVQVSCGYY 96

Query: 352 HTAAISEG-KILTWGW----------------------------------GGSH------ 370
           H+ A+S+G ++ +WG                                   GG+H      
Sbjct: 97  HSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTL 156

Query: 371 -GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G     G +  GQLG  ++ D   P ++    + K + + CG +HT AL
Sbjct: 157 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAAL 206


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 173/381 (45%), Gaps = 36/381 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVY---ATGLND 99
           G G   +LG+G LE    PV         S    A G      LT    +Y   ++G+  
Sbjct: 59  GTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYA 118

Query: 100 FGQLGISENIGYSL--EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
              +   + I Y    EP +  G    +V+I TG  H  A++ +GE+Y+WG +  GQ GL
Sbjct: 119 LLPMRRDKRIYYPTLCEPAQSLG----IVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGL 174

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G K A+ +PI  ++E          + G + S AV+  G+V +WG G  G+LGH      
Sbjct: 175 GNKEAQHLPI--RMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNG---- 228

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN-GRVYIFGDRAVDKMLFQEGN 276
                +  E  P+ +  + G  +     G   +  ++E  GR++ FG+    ++   E  
Sbjct: 229 -----TEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERG 283

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               PS++  L   +EV  GG H   LT  G+ ++WG  E+G LG G+ +    PE +  
Sbjct: 284 LCLEPSVVP-LDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPT 342

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
                 V  VS G  H+ A++E G++  WG+  S            G+LG GN+   + P
Sbjct: 343 LGPAVGVVSVSAGGGHSLALTESGQVYGWGFNAS------------GRLGLGNESSVMTP 390

Query: 396 TIVNFGENVKALQVSCGFNHT 416
           T++    + + L+  CG +H+
Sbjct: 391 TLIKALADKRVLRAICGLDHS 411



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 126/268 (47%), Gaps = 20/268 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WGN ++G+ GLG+ E++  P+    F   S+  ++CG  H+  +++ G V+  G    G
Sbjct: 163 IWGNSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDG 222

Query: 102 QLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGK 159
           QLG        L+P  ++ ++ E + +++ G   +  +   +G L+ +G    GQLG G+
Sbjct: 223 QLG-HNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAGQLGHGE 281

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +   + P    ++ +     K+ A G    +A+T  G+  SWG G  GRLGHG     L 
Sbjct: 282 RGLCLEPSVVPLDNV-----KEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATEDFL- 335

Query: 220 FLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                    P  I  L   V V   +AG  HS  + E+G+VY +G  A  ++     +  
Sbjct: 336 --------KPEPIPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSV 387

Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLT 304
             P+LI  L        +CG  H+  +T
Sbjct: 388 MTPTLIKALADKRVLRAICGLDHSLFIT 415



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 74/216 (34%), Positives = 102/216 (47%), Gaps = 18/216 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLNDFG 101
           WG G  G+LG    E   +P   +      +  + CG   T  L ET G ++  G  + G
Sbjct: 216 WGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNETEGRLFTFGNGEAG 275

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--K 159
           QLG  E  G  LEP  +      V +++ G  H  A+T DG+ + WG   +G+LG G  +
Sbjct: 276 QLGHGER-GLCLEPSVVP--LDNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATE 332

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              K  PIPT    + G+ +  A  G   S+A+T  G+V  WG   SGRLG G ESS++ 
Sbjct: 333 DFLKPEPIPTLGPAV-GVVSVSAGGG--HSLALTESGQVYGWGFNASGRLGLGNESSVM- 388

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
                   TP LIK L   +V  A  G  HS  I +
Sbjct: 389 --------TPTLIKALADKRVLRAICGLDHSLFITQ 416



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 120/280 (42%), Gaps = 29/280 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y  G   N QLG+G      +P+P + E   G     AA G+ Q+  +T   ++  WG+
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQ-ELPVGASYIDAAAGWTQNFLLTTRHELYYWGS 113

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G          ++L   R    Y P L +  + + +     G  H   + +NG VYI+G
Sbjct: 114 SGV--------YALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWG 165

Query: 264 DRAVDKMLF--QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +    +     +E  H        +     +V CG  H+  ++  G ++TWG   +G LG
Sbjct: 166 NSEFGQTGLGNKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLG 225

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHS 379
               +    P+ +     E  + +V+CG   T  +  +EG++ T+G G            
Sbjct: 226 HNGTEDELKPKELTVIRGEG-ISRVTCGTDFTGLLNETEGRLFTFGNG------------ 272

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             GQLGHG     + P++V   +NVK  +V+ G  H  AL
Sbjct: 273 EAGQLGHGERGLCLEPSVVPL-DNVK--EVAAGGAHMLAL 309



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 22/200 (11%)

Query: 229 PRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQEGNHARRPSLISK 286
           P  ++EL  G     AAAG+  +  +     +Y +G   V  +L  +       P+L   
Sbjct: 77  PVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRRDKRIYYPTLCE- 135

Query: 287 LPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            P       ++  G  H   L+  GE+Y WG++E G  G+G+ +  H P R++  F +  
Sbjct: 136 -PAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHLPIRMEF-FRDKS 193

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           +  VSCG  H+AA+S +G++ TWG+G              GQLGH    D + P  +   
Sbjct: 194 IVDVSCGLDHSAAVSKDGRVWTWGYG------------IDGQLGHNGTEDELKPKELTVI 241

Query: 402 ENVKALQVSCGFNHTGALLE 421
                 +V+CG + TG L E
Sbjct: 242 RGEGISRVTCGTDFTGLLNE 261


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 172/374 (45%), Gaps = 52/374 (13%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEDEQILTPSKMPWQP-------DSAVNQIACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG   +   S  PL+I  L   V+ QI+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGSNDYAQLGHELS---SKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       V+ +P  V  L      Q A G   S+A+T  G++ +WG+   G+LG  
Sbjct: 116 GQLGHASD-QDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLG-- 172

Query: 213 QESSILGFLRSTSEY----TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                   +++ SE      P L+  L G+ V+  A G  HS  I ++  V+ +G     
Sbjct: 173 --------VKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224

Query: 269 KMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   +  +   P+ +  L       V CG   +  LT+ G ++T G+   G LG G   
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
               P R+      S + QV+CG +HT A+  + G+I  +G G            S GQL
Sbjct: 285 NEMLP-RMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLG------------SSGQL 331

Query: 385 GHGNDVDYIHPTIV 398
           G  N      P +V
Sbjct: 332 GTRNTKSLNLPQMV 345



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 138/300 (46%), Gaps = 18/300 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L S+ RP+         +  +ACG  H++ LTE G V + G N+ GQL
Sbjct: 61  GSNDYAQLG-HELSSK-RPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+ K  +
Sbjct: 119 GHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSNIYGQLGV-KTPS 177

Query: 163 KV--IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           ++     P  +  L GI  +  A G   S  ++    V  WG    G+LG   E      
Sbjct: 178 ELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------ 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++      +   
Sbjct: 232 ---TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNEML 288

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S   +V CG  HT  +    G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTRNTKSLNLPQMVIGP 348



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 125/280 (44%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+K+         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH             S   P  I EL    +   A G  HS  + E G+V  +
Sbjct: 62  SNDYAQLGH-----------ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSW 110

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A D+ + Q     R  +L+SK     ++ CG  H+  LT  GELY WGSN
Sbjct: 111 GDNECGQLGHASDQDVVQLPKTVR--ALVSKTVV--QIACGNNHSLALTCCGELYAWGSN 166

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ +   L   ++P  +       PV  ++CG  H+  IS+   + +GW      
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTTLLG-IPVRAIACGGNHSFLISKSSAV-FGW------ 218

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 26/144 (18%)

Query: 285 SKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGP 337
           SK+P+       ++ CG  HT  LT+ G++Y  GSN+   LG  + S   L  PE V   
Sbjct: 28  SKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSNDYAQLGHELSSKRPLQIPELV--- 84

Query: 338 FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-P 395
             +  + Q++CG +H+ A++E G++L+WG             +  GQLGH +D D +  P
Sbjct: 85  --DCVITQIACGSRHSMALTEWGQVLSWG------------DNECGQLGHASDQDVVQLP 130

Query: 396 TIVNFGENVKALQVSCGFNHTGAL 419
             V    +   +Q++CG NH+ AL
Sbjct: 131 KTVRALVSKTVVQIACGNNHSLAL 154


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 144/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3990 GYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4049

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V I+ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4050 KLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSD 4109

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4110 DQL--RPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4161

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I  L G+ V     G   S  +  +G VY +G     ++     +H R
Sbjct: 4162 ---SDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVR 4218

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4219 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHA- 4277

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4278 LQGKKITRVACGSAHTLAWSTAK 4300



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 155/319 (48%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P +     ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 3009 GEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 3068

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N     +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 3069 KLG-HGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 3127

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++ P    V+ LSG    Q A G    Q++++T  G V +WG G  G+LG G      
Sbjct: 3128 ATQMKP--KLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGG----- 3180

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP L+  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3181 ----SDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3236

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 3237 RKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPSLVH- 3295

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ +++VSCG  H+ A
Sbjct: 3296 ELDDTRMNRVSCGSSHSIA 3314



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 175/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C +        LA GG  TLF +T  G VY+TG    G
Sbjct: 3937 WGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLA-GGEQTLFAVTADGKVYSTGYGAAG 3995

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3996 RLGIGGTDSVMVPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4053

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L GI     A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4054 GNRLS--YDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4107

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P++++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4108 -----SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4162

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4163 DGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRK 4222

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TWG             +  GQLG G     
Sbjct: 4223 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG------------DNDEGQLGDGTTSAL 4269

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4270 QRPRLVHALQGKKITRVACGSAHTLA 4295



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 201/418 (48%), Gaps = 41/418 (9%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  +    +R   +  Q+    +WG  D  +LG G   S+ + PV      K 
Sbjct: 2926 FLASDWEVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSKIKIPVRSEVLSK- 2983

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++  Y++ EP  I  L + V++ 
Sbjct: 2984 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD--YNMCEPKLIPFLSQYVIKK 3040

Query: 128  --ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              + +G  H+ A+T DG+++ WG+  +G+LG G      +  P  +E L     +  A G
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGN--CTTLDKPRLIESLKSKRIRDIACG 3098

Query: 186  FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
               S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A 
Sbjct: 3099 SGHSAAIASNGELYTWGLGEYGRLGHGD---------TATQMKPKLVQALSGQRVVQVAC 3149

Query: 246  GF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTC 301
            G     +  +  +G VY +GD    K+     +    P L+ +L      +V CG   + 
Sbjct: 3150 GSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSL 3209

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
             LT  GE++TWG  +   LG G+   +  P  V+G      +  V+ G  H  A+++ G+
Sbjct: 3210 ALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQ 3268

Query: 361  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            +  WG         ++ H   GQ G+G  +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3269 VYAWG---------DNDH---GQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSHSIA 3314



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 165/358 (46%), Gaps = 65/358 (18%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          +   +   L+P+ I+G  K +  +S        
Sbjct: 2949 QQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQ------- 3001

Query: 138  ITVDGELYMWGKNSNGQLGLGKK----AAKVIPIPTKVECLSGIFTKQAAL--GFEQSVA 191
               +G+LY  G+ +NG+LGLG        K+IP       LS    K+ A+  G + ++A
Sbjct: 3002 ---EGKLYACGEGTNGRLGLGDDYNMCEPKLIPF------LSQYVIKKVAVHSGGKHALA 3052

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T  GKV SWG G  G+LGHG           T+   PRLI+ L+  +++  A G  HSA
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGN---------CTTLDKPRLIESLKSKRIRDIACGSGHSA 3103

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGG 307
             I  NG +Y +G     ++   +     +P L+  L      +V CG     T  LT+ G
Sbjct: 3104 AIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADG 3163

Query: 308  ELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
             +YTWG  + G LG G  D  ++P   +R+ G      V QV CG + + A+++ G++ T
Sbjct: 3164 CVYTWGDGDFGKLGRGGSDGCYTPLLVDRLNG----LGVVQVECGAQFSLALTKYGEVWT 3219

Query: 364  WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG G               +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3220 WGKGDYF------------RLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTD 3265



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 26/291 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LT+ GCVY+ G  D G+LG  +NI +    L  + L+K ++ I+ G  +S+A++
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS 577

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
             GELY WG+ + G+LG G      + +PT V  L G      A G    Q++ VT  G 
Sbjct: 578 ASGELYTWGRGNYGRLGHGSNDD--VTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGI 635

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G          S    TP+++ +L  + V     G   SA +   G
Sbjct: 636 VFSWGDGDYGKLGRGG---------SDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG 686

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P LI  L     +++  GG H   LT    +Y WG N
Sbjct: 687 EVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRN 746

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           + G +           +   GP    P    +   K+   ++ G   ++ W
Sbjct: 747 DYGQI-----------DPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAW 786



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 159/339 (46%), Gaps = 35/339 (10%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLE-PLR-ISGLKKEVVQISTGYHHSSAITVDGELYM 146
            +G +Y  G N  GQLG  E     L  P   +S L+   +Q++ G     A+T DG++Y 
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRP--IQLAGGEQTLFAVTADGKVYS 3988

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAG 204
             G  + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G
Sbjct: 3989 TGYGAAGRLGIG--GTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4046

Query: 205  GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
              G+LGHG     L + R      P+L+++L G+++   A G  HSA I   G +Y +G 
Sbjct: 4047 DDGKLGHGNR---LSYDR------PKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGK 4097

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCL 320
                ++   + +   RP ++  L   +  +V CG     T  +T    +++WG  + G L
Sbjct: 4098 GRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKL 4157

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
            G G  D    P ++    +   V +V CG + + A++  G + TWG G  H         
Sbjct: 4158 GRGGSDGCKVPLKIDS-LAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYH--------- 4207

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
               +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4208 ---RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4243



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 139/307 (45%), Gaps = 32/307 (10%)

Query: 124  EVVQIS-TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            EV+Q   T    + A      +Y+WG N   QLG G K +K I IP + E LS +     
Sbjct: 2932 EVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLG-GLKGSK-IKIPVRSEVLSKLKPIHI 2989

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G + ++           P+LI  L    +K 
Sbjct: 2990 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMC---------EPKLIPFLSQYVIKK 3040

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
             A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG  
Sbjct: 3041 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSG 3100

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
            H+  + S GELYTWG  E G LG G       P+ VQ   S   V QV+CG +    +S 
Sbjct: 3101 HSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSL 3159

Query: 358  --EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              +G + TWG     G F        G+LG G       P +V+    +  +QV CG   
Sbjct: 3160 TADGCVYTWG----DGDF--------GKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQF 3207

Query: 416  TGALLEY 422
            + AL +Y
Sbjct: 3208 SLALTKY 3214



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 130/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AK I +P   E LS +   Q A G +   AVT  GKV S 
Sbjct: 3932 GAIYGWGHNHRGQLG-GLEGAK-IKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYST 3989

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G +GRLG G   S++          P L++ ++ V +K  A  +G  H   +   G V
Sbjct: 3990 GYGAAGRLGIGGTDSVM---------VPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4040

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP L+  L   E  ++ CGG+H+  +TS G LYTWG    
Sbjct: 4041 YSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRY 4100

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  D    P+ V+    +  V  V+CG     T  +++   + W WG        
Sbjct: 4101 GRLGHGDSDDQLRPKVVEA-LQDYKVIDVACGSGDAQTLCVTDDDNV-WSWG-------- 4150

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  ++    +  ++V CG   + AL
Sbjct: 4151 DGDY--GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4192



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 114/248 (45%), Gaps = 15/248 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   S   P +     + ++  +ACG  ++  L+ +G +Y  G  ++G+
Sbjct: 533 WGNGDGGRLGHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGR 592

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA--ITVDGELYMWGKNSNGQLGLGK 159
           LG   N   ++ P  ++ LK   VV ++ G   S    +T  G ++ WG    G+LG G 
Sbjct: 593 LGHGSNDDVTV-PTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGG 651

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L  I   +   G + S A+T  G+V +WG G + RLGHG E  +  
Sbjct: 652 SDGS--KTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHV-- 707

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+LI+ L   K+K  + G  H   + E+  VY +G     ++    G    
Sbjct: 708 -------RYPKLIESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQIDPTLGPVVS 760

Query: 280 RPSLISKL 287
            PSL   L
Sbjct: 761 EPSLCPTL 768



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 522 LALTQDGCVYSWGNGDGGRLGHGD---------NISHDEPKLIETLLEKNIIFIACGSTY 572

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 573 SAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTA 632

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G +++WG  + G LG G  D   +P+ V      + V +V CG + +AA++  G++ TW
Sbjct: 633 SGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVV-RVFCGGQFSAALTARGEVYTW 691

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHGN+    +P ++    + K   +S G  H  AL E
Sbjct: 692 GKGDAY------------RLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALTE 736



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 14/117 (11%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G H   LT  G +Y+WG+ + G LG G  ++ H   ++     E  +  ++CG  ++AA+
Sbjct: 518 GKHYLALTQDGCVYSWGNGDGGRLGHGD-NISHDEPKLIETLLEKNIIFIACGSTYSAAL 576

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           S  G++ TWG G              G+LGHG++ D   PT+V   +    + V+CG
Sbjct: 577 SASGELYTWGRGNY------------GRLGHGSNDDVTVPTLVTTLKGHMVVHVACG 621



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 11/126 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG G+     +P +        +  +A G  H L +T+TG VYA G ND GQ
Sbjct: 3220 WGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3279

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA-ITVDGE--------LYMWGKNSN 152
             G    I  + +P  +  L    + ++S G  HS A I VD           +   ++  
Sbjct: 3280 QGNGTTI-VNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGNQEPVTFQTARDPL 3338

Query: 153  GQLGLG 158
            GQ+ LG
Sbjct: 3339 GQMCLG 3344



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 16/92 (17%)

Query: 331 PERVQGPFSESPVDQV---SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           P+R+   FS+ PV  +   S G  + A   +G + +WG G             GG+LGHG
Sbjct: 498 PQRMHS-FSDKPVTMIASHSDGKHYLALTQDGCVYSWGNG------------DGGRLGHG 544

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +++ +  P ++        + ++CG  ++ AL
Sbjct: 545 DNISHDEPKLIETLLEKNIIFIACGSTYSAAL 576


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 172/368 (46%), Gaps = 34/368 (9%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P      +   +  + CG +HTLFLT+ G +YA G ND 
Sbjct: 6   WGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNNDH 65

Query: 101 GQLGISENIGYSLEPL-----RISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQ 154
           GQLG   +   +  P      R++ L+  ++  IS G  HS A+T  G+++ WG N+ GQ
Sbjct: 66  GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAVGQ 125

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG   +  +  P P  ++ +      Q A G    +A+T  G++ +WG+   G+LG G  
Sbjct: 126 LGHDAENGRQ-PTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTT 184

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           S  +          P LI+ L GV +   A G  HS  + ++G ++ +G     ++   +
Sbjct: 185 SEKVPM--------PTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND 236

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            N    P+ +  L       + CG   +  LT+ G ++T G+   G LG GS      P 
Sbjct: 237 LNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPR 296

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +V      S + Q++CG +HT A   S GKI  +G GG             GQLG G   
Sbjct: 297 KV-FELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGV------------GQLGIGMVG 343

Query: 391 DYIHPTIV 398
           ++  P IV
Sbjct: 344 NHSTPQIV 351



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/316 (31%), Positives = 157/316 (49%), Gaps = 22/316 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVV-----CSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           GN D+G+LG  L +L ++ RP +      ++ E + +  ++CG AH+L LT  G V++ G
Sbjct: 61  GNNDHGQLGHDLDTLPNK-RPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 119

Query: 97  LNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            N  GQLG     G    P  I  +  K VVQI++G +H  A+T +GELY WG NS GQL
Sbjct: 120 SNAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYGQL 179

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G+G  + KV P+PT ++ L+G+     A G   S AV+  G +  WG    G+LG    +
Sbjct: 180 GIGTTSEKV-PMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLN 238

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                    S   P  ++ L  + V+  + G   S  +   G V+  G     ++     
Sbjct: 239 ---------SRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 289

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPE 332
           ++   P  + +L  S+  ++ CG  HT     S G++Y +G    G LGIG +    +P+
Sbjct: 290 SNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQ 349

Query: 333 RVQGPFSESPVDQVSC 348
            V+GP+ ++      C
Sbjct: 350 IVRGPWFKTDFKSSDC 365



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 143/307 (46%), Gaps = 33/307 (10%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-----LGKKAAKVIPIPTKVECLSGIF 178
           EVV++  G  H+  +T +G++Y  G N +GQLG     L  K  ++     ++  L    
Sbjct: 37  EVVRVECGTSHTLFLTKEGKMYACGNNDHGQLGHDLDTLPNKRPRMSRF-KRLTSLENYI 95

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
               + G   S+A+T  G+V SWG+   G+LGH  E+          + TPR+IK +   
Sbjct: 96  ITCISCGTAHSLALTNWGQVFSWGSNAVGQLGHDAENG--------RQPTPRMIKAIGAK 147

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVV 294
            V   A+G  H   +  NG +Y +G  +  ++ +         P+LI  L   P +  + 
Sbjct: 148 HVVQIASGQYHCLALTNNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAF-IA 206

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CGG H+  ++  G ++ WG N  G LG+  ++    P +++   S   V  +SCG   + 
Sbjct: 207 CGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLG-VRYISCGDDFSV 265

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++ EG + T G     GTF        GQLGHG+  + I P  V      K  Q++CG 
Sbjct: 266 FLTNEGGVFTCG----AGTF--------GQLGHGSCSNEIVPRKVFELMGSKITQIACGR 313

Query: 414 NHTGALL 420
            HT A +
Sbjct: 314 RHTLAFV 320



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 33/280 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG  ++G+LGLG    + + +P K++        +   G   ++ +T  GK+ + G 
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRL-----IKELEGVKVKIAAAGFLHSACIDENGR 258
              G+LGH         L +     PR+     +  LE   +   + G  HS  +   G+
Sbjct: 63  NDHGQLGHD--------LDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114

Query: 259 VYIFGDRAVDKMLFQEGNHARRPS--LISKL--PYSEEVVCGGYHTCVLTSGGELYTWGS 314
           V+ +G  AV + L  +  + R+P+  +I  +   +  ++  G YH   LT+ GELY WGS
Sbjct: 115 VFSWGSNAVGQ-LGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 173

Query: 315 NENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
           N  G LGIG+  + +  P  +Q   +  P+  ++CG  H+ A+S+ G I  WG      T
Sbjct: 174 NSYGQLGIGTTSEKVPMPTLIQS-LAGVPIAFIACGGNHSFAVSKSGAIFGWG----KNT 228

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           F        GQLG  +     +PT +    ++    +SCG
Sbjct: 229 F--------GQLGLNDLNSRCYPTQLRTLRSLGVRYISCG 260


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 138/277 (49%), Gaps = 10/277 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        RP +  A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 46  GDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E       P +I  L   +++Q+S G++HS A++ DG++Y WGKNS GQLGLGK+  
Sbjct: 106 GIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFP 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 166 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQL------ALSGNNT 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + +NG+V+ FGD +  ++ +      R P 
Sbjct: 219 PVQRYKPHSIGALKSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNEN 317
            +  +     ++ CG YHT   + + GE+ ++G   N
Sbjct: 279 QVEGIDGLVSQIDCGSYHTLAYVYTTGEVVSFGRGRN 315



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 151/304 (49%), Gaps = 22/304 (7%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTG 131
           ++  ACG  H+L L   G V++ G N  GQLG          P  I  L+  +V  +S G
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLG-RRGKPREERPGLIKALETLLVGLVSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+ +   K+   P K++ L+GI   Q + G   S+A
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIF-TPKKIKTLTGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS 
Sbjct: 141 LSEDGQVYSWGKNSQGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV---CGGYHTCVLTS 305
            +  +G  + +G     ++     N      +P  I  L  S +V+   CG  HT VLT 
Sbjct: 193 ALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALK-SLDVIYISCGYEHTAVLTQ 251

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILT 363
            G+++T+G N  G LG         P++V+G   +  V Q+ CG  HT A   + G++++
Sbjct: 252 NGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYTTGEVVS 309

Query: 364 WGWG 367
           +G G
Sbjct: 310 FGRG 313



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 115/253 (45%), Gaps = 28/253 (11%)

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G   +QAA G   S+ +   G V S G    G+LG   +           E  P LIK L
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPR---------EERPGLIKAL 70

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLPYSE--E 292
           E + V + + G  HS  +   GRV+ +G  +  ++  +E       P  I  L   +  +
Sbjct: 71  ETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQ 130

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWK 351
           V CG YH+  L+  G++Y+WG N  G LG+G       SP+RV+      P+ QV+ G  
Sbjct: 131 VSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGA 189

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQ 408
           H+ A+S     ++GWG ++           GQL   G+   V    P  +   +++  + 
Sbjct: 190 HSFALSLSGT-SFGWGSNN----------TGQLALSGNNTPVQRYKPHSIGALKSLDVIY 238

Query: 409 VSCGFNHTGALLE 421
           +SCG+ HT  L +
Sbjct: 239 ISCGYEHTAVLTQ 251


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 160/338 (47%), Gaps = 28/338 (8%)

Query: 89  TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +G +Y+ G N +G+LG  ++I  + L  + + G   ++ Q+ +G    + +T +G +   
Sbjct: 327 SGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWD-DIRQVVSGNETLAVLTNEGVVLTC 385

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ G G    +V+ +   V+ L     K   A+ G E  +A+T  G   SWG   
Sbjct: 386 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYND 444

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH           +T  + P+LI+ L+  K+  A+  + HSA I + G +Y FG  
Sbjct: 445 RGQLGHEN--------LATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMN 496

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++      H   P L+  L  +E   V CG YHT + T+ GEL+T G N+ G LG+ 
Sbjct: 497 DCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLA 556

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
               +  P  V  P     V  V+CG+ H+  +S         GG   +F   G +  GQ
Sbjct: 557 HNRQIKLPTLVALP--NEMVSFVACGYYHSVVVST--------GGRAFSF---GRNDYGQ 603

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           LG G+ V    P +V    N + ++ +CG  HT  L E
Sbjct: 604 LGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSE 641



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 171/390 (43%), Gaps = 39/390 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G    R +    S      ++ +  G      LT  G V   GLN  GQ 
Sbjct: 334 GQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCGLNKSGQC 393

Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G     E +   L P++ +   + + +  S G  H  A+T  G  Y WG N  GQLG   
Sbjct: 394 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHEN 452

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
            A K I +P  +E L       A++ +  S  +T  G++ ++G    G+LG  H Q  S 
Sbjct: 453 LATK-IHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQS- 510

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                     TP+L+K LE  +V + A G  H+      G ++  G     ++       
Sbjct: 511 ----------TPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQ 560

Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            + P+L++ LP      V CG YH+ V+++GG  +++G N+ G LGIGS  V  +   V 
Sbjct: 561 IKLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGS-KVHQNVPNVV 618

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
              S + + + +CG  HT  +SE G++  +            G ++ GQLG+    D + 
Sbjct: 619 ALSSNTRMVRATCGCYHTVLLSEQGQVYVF------------GRNNKGQLGNRGSADALL 666

Query: 395 PTIVNF---GENVKALQVSCGFNHTGALLE 421
           P  +       + + + V+ GF  T  ++E
Sbjct: 667 PVPLKVRPEKNSRRCVDVAAGFYTTSLIVE 696



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 99/321 (30%), Positives = 144/321 (44%), Gaps = 22/321 (6%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G  + R    RPV     ++    A + G  H + LT+TG  Y+ G ND GQLG 
Sbjct: 391 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLG- 449

Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
            EN+   +  P  I  LK K++   S  YHHS+ IT  GELY +G N  GQLGL     +
Sbjct: 450 HENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQ 509

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+ L        A G   ++  T  G++ + G    G+LG      I      
Sbjct: 510 --STPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQI------ 561

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
                P L+  L    V   A G+ HS  +   GR + FG     ++      H   P++
Sbjct: 562 ---KLPTLVA-LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNV 617

Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSPERVQGPFS 339
           ++    +  V   CG YHT +L+  G++Y +G N  G LG  GS D +L  P +V+   +
Sbjct: 618 VALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 677

Query: 340 ESPVDQVSCGWKHTAAISEGK 360
                 V+ G+  T+ I E K
Sbjct: 678 SRRCVDVAAGFYTTSLIVERK 698



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 18/264 (6%)

Query: 1   MLGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW 60
           M+ R + A+      Q +K  +    C+  I+ T     A  WG  D G+LG  +L ++ 
Sbjct: 403 MMLRPVQALRS----QRVKFIAASNGCEHMIALT-DTGLAYSWGYNDRGQLGHENLATKI 457

Query: 61  R-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
             P +  + +   L   +    H+  +T+ G +Y  G+ND GQLG+      S   L  S
Sbjct: 458 HVPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKS 517

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
               EV  ++ G +H+   T  GEL+  GKN  GQLGL     + I +PT V  L     
Sbjct: 518 LEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHN--RQIKLPTLV-ALPNEMV 574

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
              A G+  SV V+ GG+  S+G    G+LG G +           +  P ++      +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSK---------VHQNVPNVVALSSNTR 625

Query: 240 VKIAAAGFLHSACIDENGRVYIFG 263
           +  A  G  H+  + E G+VY+FG
Sbjct: 626 MVRATCGCYHTVLLSEQGQVYVFG 649



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           + ST  R F+  +G  DYG+LG+GS   +  P V +      +    CG  HT+ L+E G
Sbjct: 586 VVSTGGRAFS--FGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQG 643

Query: 91  CVYATGLNDFGQLGISENIGYSLE-PLRISGLK--KEVVQISTGYHHSSAITV------D 141
            VY  G N+ GQLG   +    L  PL++   K  +  V ++ G++ +S I        D
Sbjct: 644 QVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVERKRENDD 703

Query: 142 GELYMWGKN 150
           G++ M  ++
Sbjct: 704 GDVIMLDQS 712


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 173/387 (44%), Gaps = 41/387 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG   L+    P + S     S+  LACGGAH + LT  G V+  G    GQ
Sbjct: 20  WGAGTDGQLGTAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQ 79

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  + +  +L P  +S     V+ Q + G+ HS  ++  G L+  G  S GQLG G   
Sbjct: 80  LGHGDILNITL-PKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGNGSFGQLGHGDNM 138

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  +  P KV   S    K  A G   S+ +  G +V  +G+G  G+LG   +       
Sbjct: 139 S--LRTPAKVSYFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQLGFTSDG------ 190

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            + S   P ++  L+ V+V   +A   HSA I  +G+ + +G        F  G   + P
Sbjct: 191 -TKSVNLPCVVSGLKDVEVTRISANGDHSAAISADGQFFSWGRG------FCAGPDVQTP 243

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN-----ENGCLGIGSIDVLHSPERVQG 336
             +       +V  G  H  +LT  GE++  G+      E   L I S + L +      
Sbjct: 244 QCLPSSLSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQPEKQQLQIDSSEALLAKVS--- 300

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
            F    V Q++ G +H+AA++E GK+ TWGWG              GQLG GN  D   P
Sbjct: 301 DFDGVKVLQIAAGAEHSAAVTENGKVKTWGWG------------EHGQLGLGNTNDQTSP 348

Query: 396 TIVNFGE---NVKALQVSCGFNHTGAL 419
            +V+ G      K ++V CG   T A+
Sbjct: 349 QLVSVGSIDLRTKEIKVYCGSGFTYAV 375



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 117/232 (50%), Gaps = 21/232 (9%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +++ WG  ++GQLG  K   +++P    +  L  I     A G    +A+T  GKV +WG
Sbjct: 16  QVWSWGAGTDGQLGTAKLQDELLPQLLSLTSLPSI--SMLACGGAHVIALTSDGKVFTWG 73

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G SG+LGHG   +I           P+L+   +G  +  AAAG+ HS  + ++G ++  
Sbjct: 74  RGSSGQLGHGDILNI---------TLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTC 124

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENG 318
           G+ +  ++   +    R P+ +S   +S E    V CG  H+ VL +G ++  +GS + G
Sbjct: 125 GNGSFGQLGHGDNMSLRTPAKVSY--FSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRG 182

Query: 319 CLGIGS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
            LG  S     ++ P  V G   +  V ++S    H+AAIS +G+  +WG G
Sbjct: 183 QLGFTSDGTKSVNLPCVVSG-LKDVEVTRISANGDHSAAISADGQFFSWGRG 233



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 72/143 (50%), Gaps = 16/143 (11%)

Query: 281 PSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+S   LP    + CGG H   LTS G+++TWG   +G LG G I  +  P+ V   F
Sbjct: 39  PQLLSLTSLPSISMLACGGAHVIALTSDGKVFTWGRGSSGQLGHGDILNITLPKLVS-FF 97

Query: 339 SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
               + Q + GW H+  +S+ G + T G    +G+F        GQLGHG+++    P  
Sbjct: 98  DGYVITQAAAGWSHSGFVSDSGCLFTCG----NGSF--------GQLGHGDNMSLRTPAK 145

Query: 398 VNFGENVKALQVSCGFNHTGALL 420
           V++  N     V+CG  H+  LL
Sbjct: 146 VSYFSNESVKMVACGMRHSLVLL 168


>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 852

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 160/338 (47%), Gaps = 30/338 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G+  +R  PV         ++A+A    H+L + + G V+A G+N  GQ
Sbjct: 164 WGPNDYGQLGDGTTTNRPVPVQVGGLS--GIRAVAASSDHSLAVRDDGTVWAWGINSSGQ 221

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P++++GL   + +++ G  +S A+  DG ++ WG NS+GQLG G    
Sbjct: 222 LG-DGTTNDRLTPVQVAGL-SSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTD 279

Query: 163 KVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           ++   P +V+ LS +    AA    LG    +AV G G V +WG  GSG+LG G      
Sbjct: 280 RL--TPGRVKGLSEVVEVSAAKYSLLGSAHVLAVRGDGTVWAWGNNGSGQLGDGT----- 332

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFL-------HSACIDENGRVYIFGDRAVDKML 271
               +T   TP  + EL+GVK       F        +S  +  +G V+ +G  +  ++ 
Sbjct: 333 ----TTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWGSNSTGQLG 388

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   RP+ ++ L     V     H   +   G +++WG N NG LG  +      P
Sbjct: 389 DGTTISRSRPAQVNALSGITAVSASSDHALAMRDDGTVWSWGKNTNGKLGDETTAHRLIP 448

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            +V G    S V  V+ G  H+ ++ E GK   WG+ G
Sbjct: 449 VQVHG---LSGVRSVAAGESHSVSVREDGKAWAWGYRG 483



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 44/362 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---------GAHTLFLTETGCVY 93
           WGN   G+LG G+   R  PV  S  E   +KA+A G         G+++L +   G V+
Sbjct: 320 WGNNGSGQLGDGTTTDRLTPVQVS--ELDGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVW 377

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           A G N  GQLG    I  S  P +++ L   +  +S    H+ A+  DG ++ WGKN+NG
Sbjct: 378 AWGSNSTGQLGDGTTISRS-RPAQVNALSG-ITAVSASSDHALAMRDDGTVWSWGKNTNG 435

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG    A ++IP+  +V  LSG+  +  A G   SV+V   GK  +WG  G G LG G 
Sbjct: 436 KLGDETTAHRLIPV--QVHGLSGV--RSVAAGESHSVSVREDGKAWAWGYRGMGLLGDGA 491

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                 FL     + P     L     +IA+ G   S  + E+  ++++G  ++  +   
Sbjct: 492 M-----FL----SFVPVQTMGLT-ATAQIASHGN-RSLAVKEDNTLWVWGSSSLGDL--G 538

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +G+    P   S L   + V  G  ++  + + G L+ WGSN  G LG GS     +P  
Sbjct: 539 DGSTGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVP 598

Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           V G   E+ V   +      A  S+G +  W            G +S GQLG G+ ++  
Sbjct: 599 VNG--LENVVGAAASFSVSLALRSDGTVWAW------------GLNSVGQLGDGSTINRS 644

Query: 394 HP 395
            P
Sbjct: 645 TP 646



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 34/307 (11%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+A G  HTL L   G V+A G ND+GQLG        + P+++ GL   +  ++    
Sbjct: 143 PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGTTTNRPV-PVQVGGLSG-IRAVAASSD 200

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           HS A+  DG ++ WG NS+GQLG G    ++ P+  +V  LS I  K+ A G   S+AV 
Sbjct: 201 HSLAVRDDGTVWAWGINSSGQLGDGTTNDRLTPV--QVAGLSSI--KRVAAGDGYSLAVH 256

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA-----GFL 248
           G G V +WG   SG+LG G          +T   TP  +K L  V V+++AA     G  
Sbjct: 257 GDGTVWAWGINSSGQLGDGT---------TTDRLTPGRVKGLSEV-VEVSAAKYSLLGSA 306

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG---------GYH 299
           H   +  +G V+ +G+    ++          P  +S+L   + +  G         G +
Sbjct: 307 HVLAVRGDGTVWAWGNNGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSY 366

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
           +  +   G ++ WGSN  G LG G+      P +V    + S +  VS    H  A+  +
Sbjct: 367 SLAVRGDGTVWAWGSNSTGQLGDGTTISRSRPAQVN---ALSGITAVSASSDHALAMRDD 423

Query: 359 GKILTWG 365
           G + +WG
Sbjct: 424 GTVWSWG 430



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 157/388 (40%), Gaps = 71/388 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G++   + PV        +   +A  G  +L + E   ++  G +  G 
Sbjct: 479 WGYRGMGLLGDGAMFLSFVPVQTMGLT--ATAQIASHGNRSLAVKEDNTLWVWGSSSLGD 536

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + +     S +  +V  ++ G  +S A+  +G L+ WG NS GQLG G    
Sbjct: 537 LGDGSTGAHPVP----SSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTN 592

Query: 163 KVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH---------- 211
           ++ P+P   +E + G     AA  F  S+A+   G V +WG    G+LG           
Sbjct: 593 RLTPVPVNGLENVVG-----AAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRSTPG 647

Query: 212 -------------------------------GQESSILGFLRSTSEYTPRLIKELEGVKV 240
                                          G     LG   +T++  P  +  L GVK 
Sbjct: 648 PVGGLVHIVGVATSGGHSLALRNDGTVWAWGGNHDGQLGDGTTTNQPKPVQVSGLSGVKA 707

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
             AA   + SA + +NG V+ +GD    ++          P L+S L   + +  G +H 
Sbjct: 708 VAAAI--VSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALASGNHHF 765

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
             L + G ++ WG N    LG G+     +P +V+G    S V  ++ G  H+ A+  +G
Sbjct: 766 LALRNDGTVWAWGDNYYSQLGDGTRTQRSTPVQVRG---LSDVKLIAAGENHSMAVRKDG 822

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHG 387
            + TW            G ++ GQLG+G
Sbjct: 823 TVWTW------------GLNTSGQLGNG 838



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 4/126 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV+ S      +KALA G  H L L   G V+A G N + Q
Sbjct: 727 WGDNYSGQLGDGTTTDRLTPVLVSGLS--GVKALASGNHHFLALRNDGTVWAWGDNYYSQ 784

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++ GL  +V  I+ G +HS A+  DG ++ WG N++GQLG G    
Sbjct: 785 LGDGTRTQRS-TPVQVRGLS-DVKLIAAGENHSMAVRKDGTVWTWGLNTSGQLGNGLLDF 842

Query: 163 KVIPIP 168
             +P+P
Sbjct: 843 SALPVP 848



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 35/266 (13%)

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q  LG  A+    + +   C++       A+G + ++ +   G V +WG    G+LG G 
Sbjct: 121 QNALGLSASASFVLSSSPTCIA----PAVAVGTQHTLLLRPDGTVWAWGPNDYGQLGDGT 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    +T+   P  +  L G++    AA   HS  + ++G V+ +G  +  ++   
Sbjct: 177 ---------TTNRPVPVQVGGLSGIRA--VAASSDHSLAVRDDGTVWAWGINSSGQLGDG 225

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
             N    P  ++ L   + V  G  ++  +   G ++ WG N +G LG G+     +P R
Sbjct: 226 TTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHGDGTVWAWGINSSGQLGDGTTTDRLTPGR 285

Query: 334 VQGPFSESPVDQVSC------GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           V+G  SE  V +VS       G  H  A+  G    W W          G++  GQLG G
Sbjct: 286 VKG-LSE--VVEVSAAKYSLLGSAHVLAV-RGDGTVWAW----------GNNGSGQLGDG 331

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGF 413
              D + P  V+  + VKA+ V   F
Sbjct: 332 TTTDRLTPVQVSELDGVKAIAVGNSF 357


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 154/334 (46%), Gaps = 30/334 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G   + ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 287 WGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNA 346

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG      V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 347 GLLGHGSNVSHWI-PKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDGTFGVLGHG 405

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
            +A+     P +VE L G+ T   + G   + AV            GK+ +WG G   RL
Sbjct: 406 NRAS--CSYPKEVESLKGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRL 463

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       AA G   +  +  +G ++  G   V  
Sbjct: 464 GHGDRSSKL---------KPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGS-PVYG 513

Query: 270 MLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 514 QLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIA 573

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
               P  V+    +  V +V+CG   TAAI + K
Sbjct: 574 DRKVPTLVEA-LKDRSVKRVACGSSFTAAICQHK 606



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 173/370 (46%), Gaps = 55/370 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T    V+  G    G+LG  I  N+    +P  +  L    V+ I+ G 
Sbjct: 268 VACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNV---FQPRLVESLSTCNVELIACGE 324

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   +
Sbjct: 325 FHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLDGLPVSAVSCGTWHT 382

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG         R++  Y P+ ++ L+G++    + G  H
Sbjct: 383 ALITSSGQLYTFGDGTFGVLGHGN--------RASCSY-PKEVESLKGLRTISVSCGVWH 433

Query: 250 SACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEV 293
           +A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + 
Sbjct: 434 TAAVVEVIISQSNASSGKLFTWGDG--DKYRLGHGDRSSKLKPTCVPSLID---YNFHKA 488

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G ++T GS   G LG  + D  + P  V+       V +V+CG  H 
Sbjct: 489 ACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRY-PRLVEEQLGGGGVVEVACGSYHV 547

Query: 354 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A ++  G++ TWG G            + G+LGHG+  D   PT+V   ++    +V+CG
Sbjct: 548 AVLTNAGEVYTWGKG------------TNGRLGHGDIADRKVPTLVEALKDRSVKRVACG 595

Query: 413 FNHTGALLEY 422
            + T A+ ++
Sbjct: 596 SSFTAAICQH 605



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 106/207 (51%), Gaps = 19/207 (9%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P+ ++    + V   A G  H+A +     V+ +G+    ++    G +  +P 
Sbjct: 248 TTDVLVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPR 307

Query: 283 LISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
           L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +V H  P+RV GP
Sbjct: 308 LVESLSTCNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGS-NVSHWIPKRVSGP 366

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               PV  VSCG  HTA I S G++ T+G     GTF        G LGHGN     +P 
Sbjct: 367 LDGLPVSAVSCGTWHTALITSSGQLYTFG----DGTF--------GVLGHGNRASCSYPK 414

Query: 397 IVNFGENVKALQVSCGFNHTGALLEYV 423
            V   + ++ + VSCG  HT A++E +
Sbjct: 415 EVESLKGLRTISVSCGVWHTAAVVEVI 441



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 47/299 (15%)

Query: 142 GELYMWGK---NSNGQLGLGKKA-----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  + A        + +P  +E    +     A G + +  VT
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG     +G    T+ + PRL++ L    V++ A G  H+  +
Sbjct: 280 RQAEVFTWGEECSGRLGHG-----IG----TNVFQPRLVESLSTCNVELIACGEFHTCAV 330

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS----KLPYSEEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S     LP S  V CG +HT ++TS G
Sbjct: 331 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVS-AVSCGTWHTALITSSG 389

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +LYT+G    G LG G+      P+ V+       +  VSCG  HTAA+ E         
Sbjct: 390 QLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIISQSNAS 448

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            GK+ TWG G  +            +LGHG+    + PT V    +    + +CG   T
Sbjct: 449 SGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLT 495


>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
 gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
 gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
           [Arabidopsis thaliana]
          Length = 393

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 186/409 (45%), Gaps = 59/409 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    V  A E +S++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P R+  L   ++ Q + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             +G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  ++E+GR+  +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG+G  D      
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMV 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V    +E  + QVSCG  H+ A++ +G+I ++G  G H           G+LG+G  
Sbjct: 293 PQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------GRLGYGRK 339

Query: 390 VDY---------IHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 422
           V           I P   +F    +       A  ++CG  HT A++E+
Sbjct: 340 VTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVEW 388



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 138/335 (41%), Gaps = 31/335 (9%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + A G  + GQLGI  N       +  +LEP  +         + +G  +S AI  DG +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG N  G LG  +   K   IP++V+ L+ +   QAA+G    +AV   G+  +WG  
Sbjct: 60  FTWGWNQRGTLGH-QPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+ G       +G         P+  +    + V+  AAG  HS  +   G V+ +G 
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
                 + Q       P  +  L     +  G +H   L   G L  WG+NE G LG G 
Sbjct: 177 PWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
                 P  VQG    + VD  + GW  TA   +G++  WG  G HG            L
Sbjct: 233 TQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRLG---------L 282

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G  +    + P  VN       +QVSCG  H+ AL
Sbjct: 283 GDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317


>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Takifugu rubripes]
          Length = 388

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 170/398 (42%), Gaps = 49/398 (12%)

Query: 48  YGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           YG+LG G +E R  P +C  +A +  +++ +  GG HT  +TE G V+  G N  GQLG+
Sbjct: 5   YGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQLGL 64

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
                 S    R  GL + V  ++ G+  +  +T  G +   G N+ GQLG+G+K A   
Sbjct: 65  GHLTDISTLQ-RCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPAYTA 123

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
            +   VE L       AA G   S+AVT  G V  WG G   +       S +      S
Sbjct: 124 DVQI-VESLKAAVVSVAA-GLRHSLAVTDSGCVYQWGIGLMSQAKRTLSPSPVP--SHLS 179

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
              P L+  L     ++ AAG +H  C+ ENG ++++G     ++L  E      P L S
Sbjct: 180 SVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQLLSSE------PFLSS 233

Query: 286 KLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLG-------IGSIDVLH 329
             P    ++          G  H    T  G ++TWG    G LG               
Sbjct: 234 PTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTT 293

Query: 330 SPERVQGPFSESP----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
             + V+ P  E P      Q++CG +H  AI  G++L+WGW            +  G  G
Sbjct: 294 EDQEVRLP-EEVPALQGATQITCGSEHNLAILGGRLLSWGW------------NEHGMCG 340

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            G+  D   P +V     ++ L + CG  H+ A+   V
Sbjct: 341 DGSHADVFQPQLV---PALRPLLIGCGAGHSMAVCAAV 375



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 143/338 (42%), Gaps = 46/338 (13%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G    G+LGLG L        C    + ++  + CG   TLFLT++G V + G N FGQL
Sbjct: 55  GQNHRGQLGLGHLTDISTLQRCLGLTQ-TVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQL 113

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           GI +   Y+ +   +  LK  VV ++ G  HS A+T  G +Y WG    G +   K+   
Sbjct: 114 GIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGI---GLMSQAKRTLS 170

Query: 164 VIPIPTK--------VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             P+P+         V  L+   ++  A G    V +T  G +  WG+       H Q  
Sbjct: 171 PSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSN-----KHSQLL 225

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           S   FL S    TP     L G  V    +G+ H     E GRV+ +G     ++    G
Sbjct: 226 SSEPFLSSP---TPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQL----G 278

Query: 276 NHA-----------------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
            HA                 R P  +  L  + ++ CG  H   +  GG L +WG NE+G
Sbjct: 279 RHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITCGSEHNLAIL-GGRLLSWGWNEHG 337

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             G GS   +  P+ V    +  P+  + CG  H+ A+
Sbjct: 338 MCGDGSHADVFQPQLVP---ALRPL-LIGCGAGHSMAV 371



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 157/344 (45%), Gaps = 43/344 (12%)

Query: 98  NDFGQLGISENIGYSLEPL----RISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSN 152
           N +GQLG   + G    P+      + LK + V++ TG   H++ IT DGE+++ G+N  
Sbjct: 3   NSYGQLG---HGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHR 59

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           GQLGLG     +  I T   CL    T      G++ ++ +T  G+VLS G+   G+LG 
Sbjct: 60  GQLGLG----HLTDISTLQRCLGLTQTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGI 115

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------D 264
           GQ+ +    +        ++++ L+   V + AAG  HS  + ++G VY +G        
Sbjct: 116 GQKPAYTADV--------QIVESLKAAVVSV-AAGLRHSLAVTDSGCVYQWGIGLMSQAK 166

Query: 265 RAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           R +          +  PSL+  L    S  V  G  H   LT  G+L+ WGSN++  L +
Sbjct: 167 RTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWGSNKHSQL-L 225

Query: 323 GSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
            S   L SP  V+        V +V  GW H  A +E G++ TWG  G++G       +S
Sbjct: 226 SSEPFLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWG-RGNYGQLGRHASTS 284

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKAL----QVSCGFNHTGALL 420
                     D      V   E V AL    Q++CG  H  A+L
Sbjct: 285 QSSESQSTTEDQ----EVRLPEEVPALQGATQITCGSEHNLAIL 324


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 178 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 237

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 238 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 296

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 297 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 354

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 355 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 404

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 405 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 464

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+    P +V+    +  V  ++CG   TAAI
Sbjct: 465 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 495



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 161 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 217

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 218 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 275

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 276 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 326

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 327 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 384

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++ + G++  G LG  + D    P  V+   +   V QV+CG  H A +
Sbjct: 385 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDG-RLPCLVEDRIAGEHVLQVACGSYHVAVL 443

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +   ++ TWG G +            G+LGHG+  D   PT V   ++     ++CG N 
Sbjct: 444 TGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVRHIACGANF 491

Query: 416 TGAL 419
           T A+
Sbjct: 492 TAAI 495



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 133 IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 192

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 193 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 251

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G     PV  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 252 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNLT 299

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 300 SISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 332


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 150/320 (46%), Gaps = 20/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG+ E+   PV       H +K +    GG H+L +T  G V++ G    G
Sbjct: 2927 GEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   ++   L P  I  L+ K +V+I+ G  HS+A+T DGELY WG    G+LG G  
Sbjct: 2987 KLG-HGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGD- 3044

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +K + IP +V+ L        A G    Q++A+T    V SWG G  G+LG G      
Sbjct: 3045 -SKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGG----- 3098

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P+ I  L G  V   A G   S  +   G+V+ +G     ++     +H 
Sbjct: 3099 ----SEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154

Query: 279  RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R P LI    K     E+  G  H   +T  GE+Y+WG N++G  G G+  V   P+   
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICL 3214

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      +  ++CG  H+ A
Sbjct: 3215 GELDGVKISHIACGSSHSIA 3234



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 190/393 (48%), Gaps = 47/393 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL----ACGGAHTLFL-TETGCVYATG 96
            +WG  D G+LG G   S+    V S  E  ++ AL      GG+ T+F+ T  G VY +G
Sbjct: 2873 VWGLNDKGQLG-GCKGSK----VKSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVYVSG 2927

Query: 97   LNDFGQLGI--SENIG--YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
                G+LG+  +ENI     L+ L +  +KK  V +  G  HS  IT +G+++ WG+  +
Sbjct: 2928 EGANGRLGLGNTENISIPVQLDTLNMHFVKK--VTVHPGGRHSLCITREGKVFSWGEGID 2985

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            G+LG G   +++ P  T +E L      + A G   S AVT  G++ +WG G  GRLGHG
Sbjct: 2986 GKLGHGDVTSRLSP--TLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHG 3043

Query: 213  QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKM 270
               ++         + P+ +K L+  KV   A G     +  + +N  V+ +GD    K+
Sbjct: 3044 DSKTL---------HIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKL 3094

Query: 271  LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                      P  I  L   +   + CG   +  L++ G+++TWG  +   LG G+    
Sbjct: 3095 GRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHY 3154

Query: 329  HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             SP+ ++GP  +  + +++ G  H  A+++ G++ +WG         ++ H   GQ G+G
Sbjct: 3155 RSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWG---------DNDH---GQQGNG 3202

Query: 388  NDVDYIHPTIVNFGE--NVKALQVSCGFNHTGA 418
            N      P I   GE   VK   ++CG +H+ A
Sbjct: 3203 NTTVNKRPQIC-LGELDGVKISHIACGSSHSIA 3234



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 182/387 (47%), Gaps = 37/387 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            +WG+   G+LG         PV+          A+A GG  TLF LT  G VYA+GL   
Sbjct: 3774 VWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVA-GGEQTLFILTSEGKVYASGLGGS 3832

Query: 101  GQLGI--SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI  S+NI     +EPL+   LK E + + +G  H+  +T + E++ WG   +G+LG
Sbjct: 3833 GRLGIGRSDNIVTPVIIEPLQ--HLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLG 3890

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G K +     P K+E L G      + G   S A+T  G++ +WG G  GRLGHG    
Sbjct: 3891 HGDKLSS--ETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDD 3948

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             L          P+L++ L+  KV   A  +G   +  I ++  V+ +GD    K+    
Sbjct: 3949 CL---------KPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGG 3999

Query: 275  GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  ++P  I  L      +V CG   +  LT  G+LYTWG  +   LG G+ D +  P 
Sbjct: 4000 SDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPR 4059

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +V        +  V+ G  H  A ++ G++ TWG             +  GQLG+G    
Sbjct: 4060 KV-ACLQGKQIVTVAAGSLHCVACTDAGEVFTWG------------DNDEGQLGNGTLNP 4106

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               PT+V   ENVK  +V CG  H+ A
Sbjct: 4107 IPEPTLVTVLENVKLNRVGCGSAHSFA 4133



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 151/316 (47%), Gaps = 35/316 (11%)

Query: 92   VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            V+  GLND GQLG      +    E   I+ L+   V I+ G      +T DG++Y+ G+
Sbjct: 2871 VFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRP--VSIAGGSKTVFIVTYDGKVYVSGE 2928

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
             +NG+LGLG    + I IP +++ L+  F K+  +  G   S+ +T  GKV SWG G  G
Sbjct: 2929 GANGRLGLGN--TENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDG 2986

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGHG           TS  +P LI+ LE   +   A G  HSA +  +G +Y +G    
Sbjct: 2987 KLGHGD---------VTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +      P  +  L   +  ++ CG     T  LT    +++WG  + G LG G
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRG 3097

Query: 324  SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
              +  + P+++        V +++CG + + A+S  GK+ TWG G  +            
Sbjct: 3098 GSEGCNIPQKIDA-LCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYY------------ 3144

Query: 383  QLGHGNDVDYIHPTIV 398
            +LGHGND  Y  P ++
Sbjct: 3145 RLGHGNDSHYRSPQLI 3160



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 143/312 (45%), Gaps = 20/312 (6%)

Query: 62   PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
            PV+    +   ++ L+   GG H + LT    V++ G  + G+LG  + +  S  P +I 
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLS-SETPRKIE 3904

Query: 120  GLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             L  K++V IS G  HS+AIT  GELY WGK   G+LG G     +   P  +E L    
Sbjct: 3905 ALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCL--KPKLLEALKSYK 3962

Query: 179  TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                A G    Q++A+T    V SWG G  G+LG G        LR         I+ L 
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLR---------IESLI 4013

Query: 237  GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
            G+ V     G   S  + +NG +Y +G     ++     +H RRP  ++ L   +   V 
Sbjct: 4014 GMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVA 4073

Query: 295  CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
             G  H    T  GE++TWG N+ G LG G+++ +  P  V        +++V CG  H+ 
Sbjct: 4074 AGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVT-VLENVKLNRVGCGSAHSF 4132

Query: 355  AISEGKILTWGW 366
            A S    +  G+
Sbjct: 4133 AWSTEAPIDIGY 4144



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 142/314 (45%), Gaps = 29/314 (9%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           +K + C   + + LT  G VY+   N   +  +   +  SL  ++I  +   V     G 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPV---LLDSLIDIKIKKIAANV----EGE 523

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H+  A++ DG +Y WG    G+LG G    +    P  V+ L      Q A G   S AV
Sbjct: 524 HYL-ALSSDGCVYSWGSGDGGRLGHGDIRRE----PELVKELVNKKITQIACGSTYSAAV 578

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
           T  G++ +WG G  GRLGHG          S     P L+  L G  V   A  +G  H+
Sbjct: 579 TSNGELYTWGRGSYGRLGHGN---------SEDRLLPTLVAGLSGSHVVDVACGSGDAHT 629

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP----YSEEVVCGGYHTCVLTSG 306
             ID++G V+ +GD    K+     +  + P ++  L     Y   V+CG   +  L   
Sbjct: 630 LAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKD 689

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWG 365
           G ++TWG ++   LG G++D +  P+ V+G  +   VD ++ G  H  A+++  +I TWG
Sbjct: 690 GTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD-IAVGPSHCLALTDNCQIFTWG 748

Query: 366 WGGSHGTFSEDGHS 379
                   S D ++
Sbjct: 749 SDVQKYALSSDNYN 762



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 119/254 (46%), Gaps = 29/254 (11%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +D  +++WG N  GQLG G K +KV   PT+++ ++ +     A G +    VT  GKV 
Sbjct: 2867 IDSRVFVWGLNDKGQLG-GCKGSKV-KSPTEMKNIAALRPVSIAGGSKTVFIVTYDGKVY 2924

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENG 257
              G G +GRLG G   +I           P  +  L    VK      G  HS CI   G
Sbjct: 2925 VSGEGANGRLGLGNTENI---------SIPVQLDTLNMHFVKKVTVHPGGRHSLCITREG 2975

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            +V+ +G+    K+   +      P+LI  L      E+ CG  H+  +T+ GELYTWG  
Sbjct: 2976 KVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLG 3035

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGKILTWGWGGSHGTF 373
            + G LG G    LH P++V+    +  V  ++CG +   T A+++   + W WG   G F
Sbjct: 3036 DYGRLGHGDSKTLHIPKQVKA-LQDYKVIDIACGSRDAQTLALTDNNCV-WSWGD--GDF 3091

Query: 374  SEDGHSSGGQLGHG 387
                    G+LG G
Sbjct: 3092 --------GKLGRG 3097



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 125/263 (47%), Gaps = 23/263 (8%)

Query: 62  PVVCSAFEKHSLKALACG--GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           PV+  +     +K +A    G H L L+  GCVY+ G  D G+LG  +      EP  + 
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGD---IRREPELVK 558

Query: 120 GL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
            L  K++ QI+ G  +S+A+T +GELY WG+ S G+LG G    ++  +PT V  LSG  
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRL--LPTLVAGLSGSH 616

Query: 179 TKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
               A G     ++A+   G V SWG G  G+LG G          S     P++++ L+
Sbjct: 617 VVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGG---------SDCCKVPKVVETLK 667

Query: 237 GVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEE 292
                I     G   S  + ++G V+ +G     ++     +H R P ++  L   +  +
Sbjct: 668 HHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD 727

Query: 293 VVCGGYHTCVLTSGGELYTWGSN 315
           +  G  H   LT   +++TWGS+
Sbjct: 728 IAVGPSHCLALTDNCQIFTWGSD 750



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 135/308 (43%), Gaps = 49/308 (15%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           + QI     +  A+T +G +Y    N+  +             P  ++ L  I  K+ A 
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCE------------APVLLDSLIDIKIKKIAA 518

Query: 185 GFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             E    +A++  G V SWG+G  GRLGHG                P L+KEL   K+  
Sbjct: 519 NVEGEHYLALSSDGCVYSWGSGDGGRLGHGD-----------IRREPELVKELVNKKITQ 567

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG- 297
            A G  +SA +  NG +Y +G  +  ++    GN   R  P+L++ L  S   +V CG  
Sbjct: 568 IACGSTYSAAVTSNGELYTWGRGSYGRL--GHGNSEDRLLPTLVAGLSGSHVVDVACGSG 625

Query: 298 -YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKHTAA 355
             HT  +   G +++WG  + G LG G  D    P+ V+        +  V CG + + A
Sbjct: 626 DAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVA 685

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGF 413
           +  +G + TWG             S G +LGHG  +D++ +P +V    N   + ++ G 
Sbjct: 686 LGKDGTVWTWG------------KSDGYRLGHGT-LDHVRYPKMVEGLINYHIVDIAVGP 732

Query: 414 NHTGALLE 421
           +H  AL +
Sbjct: 733 SHCLALTD 740


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 167/384 (43%), Gaps = 33/384 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+ G G+  S   PV        ++ A+A    H+L LT  G V A G N FGQ
Sbjct: 60  WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG           P+R+  +   V  I+ G  HS AIT  G ++ WG N+ GQLG G   
Sbjct: 120 LGDGTTASSRTPVPVRLP-VGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTT 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P+P ++    G      A G   S+AV   G  L+WG+   G+LG G         
Sbjct: 179 DSSLPVPVRLPV--GTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGT-------- 228

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  + +L    V   AAG +HS  +   G VY +G  +  ++     + +  P
Sbjct: 229 -TTGSSTPITVPQLP--TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTP 285

Query: 282 SLISKLP---YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             + ++P    +  VV G  H+  LT+ G    WG N  G LG G+     +P  V+ P 
Sbjct: 286 IAV-RVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNGATVGSSTPVAVRVPG 344

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             + +  V+    H  A+ S    L W              ++ GQLG+G   D   P  
Sbjct: 345 GAT-LTAVAIHRDHAVAVTSTATALAW------------SRNNEGQLGNGTTTDSSEPVA 391

Query: 398 VNFGENVKALQVSCGFNHTGALLE 421
           V+         V+ G +H+ AL++
Sbjct: 392 VSLPAGTAITAVAVGDDHSLALVD 415



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 130/324 (40%), Gaps = 27/324 (8%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           T  + A G N FGQ G           P+R+  +   V  I+    HS A+T  G +  W
Sbjct: 54  TDTILAWGDNSFGQFGNGTTASSRTPVPVRLP-VGTTVTAIAGSDTHSLALTSVGTVLAW 112

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G NS GQLG G  A+   P+P ++    G      A G   S+A+T  G V +WG    G
Sbjct: 113 GGNSFGQLGDGTTASSRTPVPVRLPV--GTTVTAIAAGTSHSLAITATGAVFAWGDNAVG 170

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G          +T    P  ++   G  V   A G  HS  +   G    +G  A 
Sbjct: 171 QLGDGT---------TTDSSLPVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAF 221

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++       +  P  + +LP    V  G  H+  LTS G +Y WG+N  G LG GS   
Sbjct: 222 GQLGDGTTTGSSTPITVPQLPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSD 281

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             +P  V+ P   +    VS      A  + G  L WG  G             GQLG+G
Sbjct: 282 SSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQ------------GQLGNG 329

Query: 388 NDVDYIHPTIVNF--GENVKALQV 409
             V    P  V    G  + A+ +
Sbjct: 330 ATVGSSTPVAVRVPGGATLTAVAI 353



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/328 (28%), Positives = 135/328 (41%), Gaps = 32/328 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+  S   PV        ++ A+A G +H+L +T TG V+A G N  GQ
Sbjct: 112 WGGNSFGQLGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQ 171

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       SL  P+R+  +   V  I+ G  HS A+   G    WG N+ GQLG G   
Sbjct: 172 LGDGTTTDSSLPVPVRLP-VGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTT 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               PI   V  L  +     A G   S+A+T  G V +WGA   G+LG G  S      
Sbjct: 231 GSSTPI--TVPQLPTV--TAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTS------ 280

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 TP  ++   G       +G  HS  +   G    +GD    ++    GN A   
Sbjct: 281 ---DSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQL----GNGA--- 330

Query: 282 SLISKLPYSEEVVCGGY---------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           ++ S  P +  V  G           H   +TS      W  N  G LG G+      P 
Sbjct: 331 TVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQLGNGTTTDSSEPV 390

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISEGK 360
            V  P   + +  V+ G  H+ A+ + +
Sbjct: 391 AVSLPAGTA-ITAVAVGDDHSLALVDAQ 417



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 121/286 (42%), Gaps = 34/286 (11%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+  D  +  WG NS GQ G G  A+   P+P ++    G      A     S+A+T 
Sbjct: 49  TAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPV--GTTVTAIAGSDTHSLALTS 105

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G VL+WG    G+LG G  +         S  TP  ++   G  V   AAG  HS  I 
Sbjct: 106 VGTVLAWGGNSFGQLGDGTTA---------SSRTPVPVRLPVGTTVTAIAAGTSHSLAIT 156

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVLTSGGELYT 311
             G V+ +GD AV ++       +  P  + +LP    V  + GG  H+  + S G    
Sbjct: 157 ATGAVFAWGDNAVGQLGDGTTTDSSLPVPV-RLPVGTTVTAIAGGLGHSLAVASTGATLA 215

Query: 312 WGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           WGSN  G LG G+     +P  V Q P     V  V+ G  H+ A+ S G +  W     
Sbjct: 216 WGSNAFGQLGDGTTTGSSTPITVPQLPT----VTAVAAGDVHSLALTSTGTVYAW----- 266

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
                  G +S GQLG G+  D   P  V       A  V  G +H
Sbjct: 267 -------GANSFGQLGDGSTSDSSTPIAVRVPAGTTATAVVSGADH 305


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 164/324 (50%), Gaps = 26/324 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++++ D  +    G     I +   R +   +G+ D+G+LGLG ++   +P    + +
Sbjct: 29  SKFWIRNDKAMHISCGDEHSAIITESGRLYT--FGSNDWGQLGLGHMKPTTKPGCVKSLK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +  +ACG +HT+  T+ G +Y+ G    GQLG  +    +  P  I+  +++   +S
Sbjct: 87  QEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGD-AQCATSPQLINLPEQKYKLLS 145

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS+A+T DG LYMWG  S GQLGLG   +  +  P +++  S +     + G+  +
Sbjct: 146 AGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDS--VETPKELKFHSSV--SWVSCGYYHT 201

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G    G+LG  ++      L  T+  TP+ ++ +   K+K+ A G  H
Sbjct: 202 AIVTDDGKLYTFGEKEFGKLGLTEDQ-----LEDTT--TPKHVESIT-EKIKLVACGGAH 253

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLP--YSEEVVCGGYHTCV 302
           +A I + G +Y FG    D M  Q GN         P  +++L     + V CG  HT V
Sbjct: 254 TAVISDVGNLYTFG----DGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAV 309

Query: 303 LTSGGELYTWGSNENGCLGIGSID 326
           +T  G +YT+G   +G LGI   D
Sbjct: 310 ITEKGAMYTFGDGRHGKLGISEED 333



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 164/323 (50%), Gaps = 25/323 (7%)

Query: 57  ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +SR+   + S F   + KA+  +CG  H+  +TE+G +Y  G ND+GQLG+  ++  + +
Sbjct: 20  KSRFADNLPSKFWIRNDKAMHISCGDEHSAIITESGRLYTFGSNDWGQLGLG-HMKPTTK 78

Query: 115 PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  +  LK+E V  ++ G  H+   T  G LY +G  S+GQLG G       P   ++  
Sbjct: 79  PGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSP---QLIN 135

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L     K  + G + S A+T  G +  WG+G  G+LG G   S+          TP+ +K
Sbjct: 136 LPEQKYKLLSAGTDHSAALTTDGTLYMWGSGSEGQLGLGNTDSV---------ETPKELK 186

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSE 291
                 V   + G+ H+A + ++G++Y FG++   K+   E        P  +  +    
Sbjct: 187 FHS--SVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKI 244

Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCG 349
           ++V CGG HT V++  G LYT+G   +G LG G S+  L  P++V    SE     VSCG
Sbjct: 245 KLVACGGAHTAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKV-ARLSEHKCKYVSCG 303

Query: 350 WKHTAAISE-GKILTWGWGGSHG 371
             HTA I+E G + T+G  G HG
Sbjct: 304 DNHTAVITEKGAMYTFG-DGRHG 325



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 157/340 (46%), Gaps = 40/340 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG ++      FG+   ++N+     P +      + + IS G  HS+ IT  G LY
Sbjct: 9   IPETGAIFT-----FGKSRFADNL-----PSKFWIRNDKAMHISCGDEHSAIITESGRLY 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G N  GQLGLG    K    P  V+ L        A G   ++  T  G++ S+GAG 
Sbjct: 59  TFGSNDWGQLGLGH--MKPTTKPGCVKSLKQEGVNLVACGRSHTIVCTKAGRLYSFGAGS 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G          +    +P+LI  L   K K+ +AG  HSA +  +G +Y++G  
Sbjct: 117 DGQLGTGD---------AQCATSPQLIN-LPEQKYKLLSAGTDHSAALTTDGTLYMWGSG 166

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI--G 323
           +  ++     +    P  +        V CG YHT ++T  G+LYT+G  E G LG+   
Sbjct: 167 SEGQLGLGNTDSVETPKELKFHSSVSWVSCGYYHTAIVTDDGKLYTFGEKEFGKLGLTED 226

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 382
            ++   +P+ V+    +  +  V+CG  HTA IS+ G + T+G  G H           G
Sbjct: 227 QLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFG-DGMH-----------G 272

Query: 383 QLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG+G  +  +  P  V      K   VSCG NHT  + E
Sbjct: 273 QLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITE 312



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 43  WGNGDYGRLGL--GSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +G  ++G+LGL    LE    P  V S  EK  +K +ACGGAHT  +++ G +Y  G   
Sbjct: 213 FGEKEFGKLGLTEDQLEDTTTPKHVESITEK--IKLVACGGAHTAVISDVGNLYTFGDGM 270

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG   ++     P +++ L +   + +S G +H++ IT  G +Y +G   +G+LG+ 
Sbjct: 271 HGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVITEKGAMYTFGDGRHGKLGIS 330

Query: 159 KKAAKVIPIPTKV 171
           ++    I  P KV
Sbjct: 331 EEDFCNIFKPCKV 343


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 181/363 (49%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 217 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 275

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 276 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 334

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 335 AIISSAGQIFTYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 385

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 386 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 445

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V ++S G  H A ++
Sbjct: 446 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 504

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   ++CGFN T
Sbjct: 505 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 552

Query: 417 GAL 419
            A+
Sbjct: 553 MAI 555



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 44/320 (13%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 158 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 215

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 216 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 266

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L   G+  +R        +        
Sbjct: 267 TRVKAIAFGAKHTCAVSISGELYEWGEGT--HCLGLWGDQYQRSQWFPHKLFGPLDGISI 324

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            ++ CG +HT +++S G+++T+G    G LG G    +  P++V+          ++CG 
Sbjct: 325 LKIACGHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVES-LKGVRAKAIACGP 383

Query: 351 KHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            HTAAI E           GK+ TW            G +  G+LGH +    + PT V 
Sbjct: 384 WHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMKLVPTCVE 431

Query: 400 FGENVKALQVSCGFNHTGAL 419
              +    QVSC    T  L
Sbjct: 432 PLNDFDFAQVSCAKAQTIVL 451



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 129/291 (44%), Gaps = 29/291 (9%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKV 198
           D + YM  K +   +   K + + I +  K+  + ++ +  ++++ G   +   T    +
Sbjct: 124 DLDYYM-EKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDI 182

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             WG      L HG  S     L       PRL+     + V+  A G  H+A + + G 
Sbjct: 183 FVWGEVPGNVLDHGDVSKANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGE 235

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P +I  L  +  + +  G  HTC ++  GELY WG   
Sbjct: 236 VFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGT 295

Query: 317 NGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
           + CLG+       S   P ++ GP     + +++CG  HTA IS  G+I T+G     GT
Sbjct: 296 H-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIFTYG----DGT 350

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           F        G LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 351 F--------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 393



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 408 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 467

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 468 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 523

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 524 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 555



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 43/337 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 239 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 298

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+++ +G  + G L
Sbjct: 299 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQIFTYGDGTFGVL 354

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 355 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 412

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 413 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 463

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 464 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 519

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           LG+G       P  V+    +  V  ++CG+  T AI
Sbjct: 520 LGLGDYVDRSYPTLVEA-LEDKQVHSIACGFNFTMAI 555


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 179/370 (48%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 314 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDSLSNTNIELVA 370

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 428

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G +  I+A G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGVLGHGDTKSV---------SKPREVESLKGHRTVISACG 479

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P  
Sbjct: 480 VWHTAAVVEIMVGNPSSSNCSSGKLFTWGD--GDKGRLGHGDKEAKLVPTCVAALVDPNF 537

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             V CG   T  LT+ G +YT GS   G LG    D    P RV+G  ++S V++++CG 
Sbjct: 538 CRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADG-KLPTRVEGKLAKSFVEEIACGA 596

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   +
Sbjct: 597 YHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNSPTLVEALKDKQVKSI 644

Query: 410 SCGFNHTGAL 419
           +CG N T  +
Sbjct: 645 ACGTNFTATI 654



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 149/340 (43%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 336 WGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNF 395

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 396 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG 454

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
               K +  P +VE L G  T  +A G   + AV               GK+ +WG G  
Sbjct: 455 D--TKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK 512

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G VY  G   
Sbjct: 513 GRLGHGDKEAKL---------VPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGS-- 561

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 562 --PVYGQLGN----PQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGA 615

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  D  +SP  V+    +  V  ++CG   TA I
Sbjct: 616 NGRLGHGDTDDRNSPTLVEA-LKDKQVKSIACGTNFTATI 654



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 119/271 (43%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G   +  VT  G++ SWG    GRLGHG +S +L        
Sbjct: 302 LPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 353

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 354 -HPKLIDSLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 412

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  V+      
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHR 472

Query: 342 PVDQVSCGWKHTAAI-------------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V   +CG  HTAA+             S GK+ TWG G              G+LGHG+
Sbjct: 473 TVIS-ACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDK------------GRLGHGD 519

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V    +    +V+CG + T AL
Sbjct: 520 KEAKLVPTCVAALVDPNFCRVACGHSLTVAL 550



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 303 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLS 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 421

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 422 SSISCGPWHTAVVTSSGQLFTFG----DGTF--------GVLGHGDTKSVSKPREVESLK 469

Query: 403 NVKALQVSCGFNHTGALLEYV 423
             + +  +CG  HT A++E +
Sbjct: 470 GHRTVISACGVWHTAAVVEIM 490


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+    P +V+    +  V  ++CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++ + G++  G LG  + D    P  V+   +   V QV+CG  H A +
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDG-RLPCLVEDRIAGEHVLQVACGSYHVAVL 366

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +   ++ TWG G +            G+LGHG+  D   PT V   ++     ++CG N 
Sbjct: 367 TGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVRHIACGANF 414

Query: 416 TGAL 419
           T A+
Sbjct: 415 TAAI 418



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G     PV  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNLT 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|148230808|ref|NP_001088703.1| uncharacterized protein LOC495967 [Xenopus laevis]
 gi|56270445|gb|AAH87342.1| LOC495967 protein [Xenopus laevis]
          Length = 394

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 174/400 (43%), Gaps = 35/400 (8%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS--LKALACGGAHTLFLTETGCVY 93
           QR FA  WG   YG+LGLG+ +    P + + F  H   +K+++ GG H+  +T+ G VY
Sbjct: 9   QRLFA--WGANSYGQLGLGTTQDSLLPQLVTGFPNHETVIKSISAGGGHSAAVTDAGHVY 66

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G N  GQLG++     +   L    L   V +++ G+  +  +T  GEL   G N+  
Sbjct: 67  VCGQNSEGQLGLNHTTDVTHFSLCPGTLTLRVSKVACGWDFTLILTDSGELLSCGANTYS 126

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG   +    IP P  ++    +     A G    +A+T  G++  WG+G +       
Sbjct: 127 QLGRAGEERSCIPRPLDIQKRKVL---DVAAGLRHVLALTDNGQIFQWGSGLASHARRFS 183

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +   +  + S++E  P  +  + G+  K+ AAG  H   + + G VY++G     ++L  
Sbjct: 184 QQKPIPAVYSSTE--PCAVPGMNGICGKMVAAGSYHCVALSDAGDVYVWGSNKHGQLLHS 241

Query: 274 EGNHARRPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID---- 326
           +        + + L   E    VV G  H    T  G+++TWG      LG         
Sbjct: 242 DPFLLHPHRVQAHLFLGERIVAVVSGWTHLVAQTDTGKVFTWGRANYSQLGRPPNSEGTG 301

Query: 327 ----VLHSPERVQGPF---SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
               VL      Q P    S +   QV+CG +H  A+  G + +WGW            +
Sbjct: 302 LHETVLQGISANQLPAWIPSLTGSSQVACGSEHNLAVCGGLLYSWGW------------N 349

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G  G+G++ +   PT+V      +   + CG  H+ AL
Sbjct: 350 EHGMCGNGSETNVPVPTLVGIPPTARVDLIGCGAGHSMAL 389


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 168/370 (45%), Gaps = 44/370 (11%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEEEQILTPSRIPWKP-------DSAVNQIACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG       +  PL+I  L+  V+ QI+ G  HS A++  G+++ WG N  
Sbjct: 59  ACGSNDYSQLGHELP---TKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       ++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGHASD-QDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVS 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
             + +          TP  +  L G+ V   A G  HS  I ++  V+ +G     ++  
Sbjct: 175 SPNDL------QQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  +   P+ +  L       V CG   +  LT  G ++T G+   G LG G       
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           P R+      S + QV+CG +HT A+  S G+I  +G G            S GQLG  N
Sbjct: 289 P-RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLG------------SSGQLGTRN 335

Query: 389 DVDYIHPTIV 398
                 P +V
Sbjct: 336 TKSLNLPQLV 345



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP+     + + +  +ACG  H++ L+E G V++ G N+ GQL
Sbjct: 61  GSNDYSQLG-HELPTK-RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GKKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+     
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQLGVSSPND 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P ++  L GI     A G   S  ++    V  WG    G+LG   E       
Sbjct: 179 LQQSNTPMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDE------- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGFSSNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQLVIGP 348



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 29/276 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P  I EL+   +   A G  HS  + E G+V+ +
Sbjct: 62  SNDYSQLGHELPTK-----------RPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           GD    ++    + +  + P ++  L      ++ CG  H+  LT  GELY+WGSN  G 
Sbjct: 111 GDNECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLYGQ 170

Query: 320 LGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
           LG+ S + L   ++P R+       PV  ++CG  H+  IS+   + +GW          
Sbjct: 171 LGVSSPNDLQQSNTPMRLTTLLG-IPVSAIACGGNHSFLISKSSAV-FGW---------- 218

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 23/145 (15%)

Query: 281 PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQG 336
           PS I   P S   ++ CG  HT  LT+ G++Y  GSN+   LG  + +   L  PE    
Sbjct: 27  PSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQIPE---- 82

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH- 394
              +  + Q++CG +H+ A+SE G++ +WG             +  GQLGH +D D +  
Sbjct: 83  -LQDYVITQIACGSRHSMALSEWGQVFSWG------------DNECGQLGHASDQDIVKL 129

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           P IV    +   +Q++CG NH+ AL
Sbjct: 130 PKIVRNLVSKTVVQIACGSNHSLAL 154


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 179/385 (46%), Gaps = 40/385 (10%)

Query: 7   TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
            A +K+++++D  L    G     + +   R F   +G+  +G+LGLG  +   +P    
Sbjct: 15  NAPSKFWIREDKVLHISCGDEHTSLLAGDGRVFT--FGDNAWGQLGLGHTKPVTKPTRIK 72

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
           + +   +  +ACG +HTL  TE+G +Y+ G N+  QLG+  +      P  I GL+   V
Sbjct: 73  SLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAV 132

Query: 127 Q-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-----VIPIPTKVECLSGIFTK 180
           + +S G +HS  +T  G +Y+WG    GQLG G+   K      + +  +V C+      
Sbjct: 133 KMLSAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCI------ 186

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             A G+  +  VT GGK+L++G    G+LG G ++             P+++  +EG  V
Sbjct: 187 --ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTG--------DNCLPKVVDGIEGHVV 236

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDK-----MLFQEGNHARRPSLI--SKLPYSEEV 293
            +A  G  H+  I     VY FG+ +  +     ML Q    A  P  I   K       
Sbjct: 237 SVACGG-AHTVAI-TGWLVYTFGNGSSGQLGHGNMLLQ----ADTPHKIVWQKPTKVRSA 290

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG-PFSESPVDQVSCGWKH 352
            CG  HT ++T  G+L+T G   +G L +G  +  +  +      FS+  V+QVSCG  H
Sbjct: 291 SCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCH 350

Query: 353 TAAISEGKILTWGWGGSHGTFSEDG 377
           T A   GK        +H +  E+G
Sbjct: 351 TLAT--GKPSLQNGNAAHDSSDEEG 373



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 161/340 (47%), Gaps = 45/340 (13%)

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
           TG V+      FG+   ++N      P +    + +V+ IS G  H+S +  DG ++ +G
Sbjct: 1   TGAVFT-----FGKSKFADNA-----PSKFWIREDKVLHISCGDEHTSLLAGDGRVFTFG 50

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N+ GQLGLG    K +  PT+++ L      Q A G   ++  T  GK+ S+G     +
Sbjct: 51  DNAWGQLGLGH--TKPVTKPTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQ 108

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LG G        L      +P +IK LE   VK+ +AG  HS  + + G VY++G     
Sbjct: 109 LGLG--------LDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLTDKGSVYLWGGGEEG 160

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           ++ F  G    +     +L   +EVVC   G YHT ++T+GG+L T+G  + G LG GS 
Sbjct: 161 QLGF--GEDVTKHETPERLDVDDEVVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSD 218

Query: 326 DVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
              +  P+ V G   E  V  V+CG  HT AI+   + T+G G S            GQL
Sbjct: 219 TGDNCLPKVVDG--IEGHVVSVACGGAHTVAITGWLVYTFGNGSS------------GQL 264

Query: 385 GHGN---DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GHGN     D  H  +  + +  K    SCG NHT  + +
Sbjct: 265 GHGNMLLQADTPHKIV--WQKPTKVRSASCGENHTALVTD 302


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E    P +  +    ++  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   + G+ + P RISG      V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGTDAGHWI-PKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
              +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NLTS--ISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   + C+  +G+V   G+ +V
Sbjct: 278 RLGHGDKESRL---------KPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGN-SV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  R P L+      E   +V CG YH  VLT   E++TWG   NG LG G 
Sbjct: 328 YGQLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGD 387

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+    P +V+    +  V  ++CG   TAAI
Sbjct: 388 IEDRKVPTQVEA-LKDRAVRHIACGANFTAAI 418



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 164/364 (45%), Gaps = 51/364 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   +T  G V+  G +  G+LG    E+   S+ P  +  L    V  ++ G  H
Sbjct: 84  CGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED---SVHPRLVESLAACNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G  A   IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIP--KRISGALDGLPVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG  +SI           P+ ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGNLTSI---------SCPKEVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCG 296
            I E            G+++ +GD   DK     G+   R  P+ ++ L   +   V CG
Sbjct: 250 AIVEVIVTHSSSSVSAGKLFTWGDG--DKHRLGHGDKESRLKPTCVASLIDYDFYRVACG 307

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++ + G++  G LG  + D    P  V+   +   V QV+CG  H A +
Sbjct: 308 HSLTVCLTTSGKVLSMGNSVYGQLGNPNSDG-RLPCLVEDRIAGEHVLQVACGSYHVAVL 366

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +   ++ TWG G +            G+LGHG+  D   PT V   ++     ++CG N 
Sbjct: 367 TGRSEVFTWGKGAN------------GRLGHGDIEDRKVPTQVEALKDRAVRHIACGANF 414

Query: 416 TGAL 419
           T A+
Sbjct: 415 TAAI 418



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 104/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A +  NG V+ +G+ +  ++      
Sbjct: 56  IIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ D  H  P
Sbjct: 116 DSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGT-DAGHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G     PV  VSCG  HTA I S G++ T+G G            S G LGHGN  
Sbjct: 175 KRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDG------------SFGVLGHGNLT 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPKEVESLSGLKTIAVACGVWHTAAIVEVI 255


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 170/364 (46%), Gaps = 32/364 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T+ G +Y+ G ND+
Sbjct: 31  WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  + + G +H+ AI   G+L+ WG N+ GQLGL  
Sbjct: 91  GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K   +   P  V+ L      Q A G + + A+T  G++ SWG+   G+LG G ++    
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKY-- 204

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+ I    G+ +   A G  HS  I ++G V+ +G     ++   +     
Sbjct: 205 ------EIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS      P +V   
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S V Q+SCG +HT A+  S G++  WG GG+            GQLG+ +      P
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHSTRSVTTP 365

Query: 396 TIVN 399
            +V+
Sbjct: 366 QVVH 369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HTL + E G +++ G N  GQL
Sbjct: 86  GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTK 203

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +    GI     A G   S+A++  G V  WG    G+LG          L 
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252

Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T +   P  ++ L+  K+  AA G   S  +  +G V+  G     ++     ++   P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 51/368 (13%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+   +  H  K + C G+     T  G +   G+ D       ENI   L P  +  
Sbjct: 13  EPVIAVEYPLHKKKDMFCWGS-----TIHGELGLGGIED-------ENI---LIPRELDF 57

Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGI 177
            K  E+ QI+ G +++  IT  GE+Y  G N  GQLG   G+K  ++IP       L   
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP------GLDAF 111

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K+AA G   ++A+   G++ SWG+   G+LG   ++ +        E +PR++K L  
Sbjct: 112 VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFM--------ESSPRMVKTLGT 163

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK---LPYSEEV 293
             V   A G  H+  +  NG +Y +G  +  ++ L  +  +  +P  IS    +P +  +
Sbjct: 164 SVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAF-I 222

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CGGYH+  ++  G ++ WG N  G LG+      + P ++Q     + +   +CG + +
Sbjct: 223 ACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQT-LQNAKICYAACGEEFS 281

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             ++ +G + T G G              GQLGHG++ + I P  V         Q+SCG
Sbjct: 282 VFLTVDGGVFTCGAGMY------------GQLGHGSNSNEILPRQVMELMGSTVTQISCG 329

Query: 413 FNHTGALL 420
             HT AL+
Sbjct: 330 KRHTLALV 337


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 180/370 (48%), Gaps = 52/370 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPQLIEALSNTNIEFVA 373

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 374 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVP--KRVNGPLEGIHVSSISCGP 431

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  V+  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA G
Sbjct: 432 WHTAVVSSAGQLFTFGDGTFGVLGHGDRKSI---------SLPREVESLKGLRTVQAACG 482

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYS 290
             H+A + E            +G+++ +GD   DK     G+   +  P+ +S L  P  
Sbjct: 483 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVSALVEPNF 540

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T   T+ G +YT GS   G LG    D    P RV+G  S S V++++CG 
Sbjct: 541 CQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDG-KLPARVEGKLSRSSVEEIACGA 599

Query: 351 KHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H A + S+ ++ TWG G +            G+LGHG+  D   P++V   ++ +   +
Sbjct: 600 YHVAVLTSKTEVYTWGKGAN------------GRLGHGDTDDKNLPSLVEALKDKQVKSI 647

Query: 410 SCGFNHTGAL 419
           +CG N T A+
Sbjct: 648 ACGTNFTAAI 657



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 153/333 (45%), Gaps = 33/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  +F
Sbjct: 339 WGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNF 398

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ ++  G+L+ +G  + G LG G
Sbjct: 399 GLLGHGNEVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHG 457

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K I +P +VE L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 458 DR--KSISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 515

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +     +G VY  G   
Sbjct: 516 GRLGHGDKEAKL---------VPTCVSALVEPNFCQVACGHSLTIARTTSGHVYTMGS-P 565

Query: 267 VDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           V   L    +  + P+ +  KL  S  EE+ CG YH  VLTS  E+YTWG   NG LG G
Sbjct: 566 VYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             D  + P  V+    +  V  ++CG   TAAI
Sbjct: 626 DTDDKNLPSLVEA-LKDKQVKSIACGTNFTAAI 657



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 40/270 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G++ SWG    GRLGHG +S +L        
Sbjct: 305 LPKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVL-------- 356

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    ++  A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 357 -HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRV 415

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V++S G+L+T+G    G LG G    +  P  V+      
Sbjct: 416 NGPLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLR 475

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V Q +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 476 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGD 522

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
               + PT V+        QV+CG + T A
Sbjct: 523 KEAKLVPTCVSALVEPNFCQVACGHSLTIA 552



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 306 PKALESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALS 365

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+ +V H  P+RV GP     V
Sbjct: 366 NTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGN-EVSHWVPKRVNGPLEGIHV 424

Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA +S  G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 425 SSISCGPWHTAVVSSAGQLFTFG----DGTF--------GVLGHGDRKSISLPREVESLK 472

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ +Q +CG  HT A++E +
Sbjct: 473 GLRTVQAACGVWHTAAVVEVM 493


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 145/323 (44%), Gaps = 18/323 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  D G
Sbjct: 3954 GYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDG 4013

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            +LG    + Y    L    L  E+V ++ G HHS+AIT  G LY WGK   G+LG G   
Sbjct: 4014 KLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSE 4073

Query: 162  AKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   P  VE L        A G    Q++ VT    V SWG G  G+LG G       
Sbjct: 4074 DQL--TPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGG------ 4125

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               S     P  I+ L G+ V     G   S  +  +G +Y +G     ++     +H R
Sbjct: 4126 ---SDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVR 4182

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            RP  ++ L   +   +  G  H    +  GE++TWG N+ G LG G+   L  P  V   
Sbjct: 4183 RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHA- 4241

Query: 338  FSESPVDQVSCGWKHTAAISEGK 360
                 + +V+CG  HT A S  K
Sbjct: 4242 LQGKKITRVACGSAHTLAWSTMK 4264



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 152/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2967 GEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDG 3026

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N     +P  I  LK K +  ++ G  HS+AIT  GELY WG    G+LG G  
Sbjct: 3027 KLG-HGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGRLGHGDT 3085

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3086 NTQLKP--KLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGG----- 3138

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP L+  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 3139 ----SDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 3194

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G GS  V   P  V  
Sbjct: 3195 RKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVNKKPSLVHE 3254

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 3255 -LDDARVNRVSCGSSHSIA 3272



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 176/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV+C +        L  GG  TLF +T  G VYATG    G
Sbjct: 3901 WGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLT-GGEQTLFAVTADGKVYATGYGAVG 3959

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE ++   +KK  V +++G  H  A++ +G +Y WG+  +G+LG 
Sbjct: 3960 RLGIGGTDSVMMPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGHVYSWGEGDDGKLGH 4017

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L G      A G   S A+T  G + +WG G  GRLGHG     
Sbjct: 4018 GNRLS--YDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---- 4071

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  + TP+L++ L+  KV   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4072 -----SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGS 4126

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P +
Sbjct: 4127 DGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDDHVRRPRK 4186

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TWG             +  GQLG G     
Sbjct: 4187 VAA-LQGKKIISIATGSLHCVACSDKGEVFTWG------------DNDEGQLGDGTTCAL 4233

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K  +V+CG  HT A
Sbjct: 4234 QRPRLVHALQGKKITRVACGSAHTLA 4259



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 163/340 (47%), Gaps = 37/340 (10%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            VY  GLND  QLG  +     L     S  K + V I+ G      ++ +G+LY  G+ +
Sbjct: 2911 VYVWGLNDKDQLGGLKGSKIKLPVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEGT 2970

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG       P P  +  LS    K+ A+  G + ++A+T  G+V SWG G  G+L
Sbjct: 2971 NGRLGLGDDGNACEPKP--IPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWGEGEDGKL 3028

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GHG  SS+           PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3029 GHGNCSSL---------DKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   + N   +P L+  L      +V CG     T  LT+ G +Y+WG  + G LG G  
Sbjct: 3080 LGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRGGS 3139

Query: 326  DVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            D  ++P   +R+ G      V Q+ CG + + A+++ G++ TWG G              
Sbjct: 3140 DGCYTPLLVDRLNG----LGVVQIECGAQFSLALTKYGEVWTWGKGDYF----------- 3184

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 3185 -RLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3223



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 37/395 (9%)

Query: 34   TLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFL-TETGC 91
            T Q     +WG  D  +LG G   S+ + PV   +  K     +A GG+ TLF+ ++ G 
Sbjct: 2905 TPQHSAVYVWGLNDKDQLG-GLKGSKIKLPVYSESLSKLKPVHIA-GGSKTLFVVSQEGK 2962

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWG 148
            +YA G    G+LG+ ++ G + EP  I  L + V++   + +G  H+ A+T DG ++ WG
Sbjct: 2963 LYACGEGTNGRLGLGDD-GNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSWG 3021

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            +  +G+LG G  ++  +  P  +E L     +  A G   S A+T  G++ +WG G  GR
Sbjct: 3022 EGEDGKLGHGNCSS--LDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEYGR 3079

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRA 266
            LGHG          + ++  P+L++ L G +V   A G     +  +  +G VY +GD  
Sbjct: 3080 LGHGD---------TNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGD 3130

Query: 267  VDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              K+     +    P L+ +L      ++ CG   +  LT  GE++TWG  +   LG G+
Sbjct: 3131 FGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHGN 3190

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
               +  P  V+G      V  V+ G  H  A+++ G++  WG         ++ H   GQ
Sbjct: 3191 DHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQ 3237

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             G+G+ +    P++V+  ++ +  +VSCG +H+ A
Sbjct: 3238 QGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIA 3272



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 154/337 (45%), Gaps = 31/337 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +G +Y  G N  GQLG  E     L  L  S      VQ++ G     A+T DG++Y  G
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATG 3954

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGS 206
              + G+LG+G      + +PT +E +  +F K+ A+  G +  +A++  G V SWG G  
Sbjct: 3955 YGAVGRLGIG--GTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDD 4012

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G+LGHG     L + R      P+LI+EL G ++   A G  HSA I   G +Y +G   
Sbjct: 4013 GKLGHGNR---LSYDR------PKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGR 4063

Query: 267  VDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +T    +++WG  + G LG 
Sbjct: 4064 YGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGR 4123

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G  D    P +++   +   V +V CG + + A++  G I TWG G  H           
Sbjct: 4124 GGSDGCKVPMKIES-LAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYH----------- 4171

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             +LGHG D     P  V   +  K + ++ G  H  A
Sbjct: 4172 -RLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4207



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 148/343 (43%), Gaps = 40/343 (11%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           S TLQ   A  WG+  +G  G GS      P  C A  +  +K L C     + L+ +G 
Sbjct: 432 SQTLQEVLA--WGSVKFG--GTGS-----SPFYCDAIAELGIKQLCCTERALMILSTSGN 482

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY---HHSSAITVDGELYMWG 148
           VY        Q            P R+ G   + V +   +    H  A+T D  +Y WG
Sbjct: 483 VYMMYYGSETQY-----------PQRVYGFSDKFVAMIASHPDGKHYLALTEDSSVYSWG 531

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
               G+LG G +       P  +E L        A G   S A++  G++ +WG G  GR
Sbjct: 532 NGDGGRLGHGDRTW--YEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRA 266
           LGHG    ++          P L+  L G  +   A  +G   + C+  +G V+ +GD  
Sbjct: 590 LGHGNSDDVM---------VPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGD 640

Query: 267 VDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             K+     N ++ P ++ KL      +V CGG  +  LT+ GE+YTWG  E   LG G+
Sbjct: 641 YGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGN 700

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
            + +  P+ ++       V ++  G  H  A++E + L +GWG
Sbjct: 701 EEHVRYPKAIEA-LKTKKVKELCVGSLHVLALTEDQ-LVYGWG 741



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 15/243 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G H L LTE   VY+ G  D G+LG  +   Y    L  S + K +  I+ G  +S+A++
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALS 574

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGK 197
            +GELY WG+ + G+LG G   +  + +PT V  L+G      A G    Q++ VT  G 
Sbjct: 575 SNGELYTWGRGNYGRLGHGN--SDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGI 632

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG G  G+LG G               TP+++ +L  + V     G   SA +   G
Sbjct: 633 VFSWGDGDYGKLGRGG---------CNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG 683

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G     ++      H R P  I  L     +E+  G  H   LT    +Y WG N
Sbjct: 684 EVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRN 743

Query: 316 ENG 318
           + G
Sbjct: 744 DYG 746



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 136/306 (44%), Gaps = 31/306 (10%)

Query: 124  EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            E+VQ                +Y+WG N   QLG G K +K I +P   E LS +     A
Sbjct: 2891 EIVQEQASSQRGVETPQHSAVYVWGLNDKDQLG-GLKGSK-IKLPVYSESLSKLKPVHIA 2948

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G +    V+  GK+ + G G +GRLG G + +            P+ I  L    +K  
Sbjct: 2949 GGSKTLFVVSQEGKLYACGEGTNGRLGLGDDGNAC---------EPKPIPFLSQYVIKKV 2999

Query: 244  A--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
            A  +G  H+  + ++GRV+ +G+    K+     +   +P LI  L      +V CG  H
Sbjct: 3000 AVHSGGKHALALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGH 3059

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAI 356
            +  +TS GELYTWG  E G LG G  +    P+ VQ    +  V QV+CG +     A  
Sbjct: 3060 SAAITSSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQR-VIQVACGSRDAQTMALT 3118

Query: 357  SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            ++G + +WG     G F        G+LG G       P +V+    +  +Q+ CG   +
Sbjct: 3119 ADGSVYSWG----DGDF--------GKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFS 3166

Query: 417  GALLEY 422
             AL +Y
Sbjct: 3167 LALTKY 3172



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 15/248 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G       P +  +    ++  +ACG  ++  L+  G +Y  G  ++G+
Sbjct: 530 WGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGR 589

Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    + P  +S L   +   V   +G   +  +T  G ++ WG    G+LG G 
Sbjct: 590 LG-HGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG- 647

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L  I   +   G + S A+T  G+V +WG G + RLGHG E  +  
Sbjct: 648 -GCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV-- 704

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+ I+ L+  KVK    G LH   + E+  VY +G     ++    G    
Sbjct: 705 -------RYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQIDPALGTIVS 757

Query: 280 RPSLISKL 287
            P+L   L
Sbjct: 758 EPTLCPTL 765



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T    V SWG G  GRLGHG           T    P+LI+ L    +   A G  +
Sbjct: 519 LALTEDSSVYSWGNGDGGRLGHGDR---------TWYEEPKLIESLVDKNITFIACGSTY 569

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  NG +Y +G     ++     +    P+L+S L       V CG     T  +T+
Sbjct: 570 SAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTA 629

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +++WG  + G LG G  +   +P+ V     +  V +V CG + +AA++  G++ TW
Sbjct: 630 SGIVFSWGDGDYGKLGRGGCNGSKTPKIVDK-LLDINVAKVYCGGQFSAALTAYGEVYTW 688

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHGN+    +P  +   +  K  ++  G  H  AL E
Sbjct: 689 GKGEAY------------RLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTE 733



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG G E + +          P L + L  ++      G      +
Sbjct: 3894 GSGAIYGWGHNHRGQLG-GLEGAKVKL--------PVLCESLSALRPVQLTGGEQTLFAV 3944

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+VY  G  AV ++     +    P+L+  + +       V  GG H   L+S G +
Sbjct: 3945 TADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHV 4004

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
            Y+WG  ++G LG G+      P+ ++       VD V+CG  H+AAI S G + TWG G 
Sbjct: 4005 YSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVD-VACGGHHSAAITSAGWLYTWGKG- 4062

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V   ++ K + V+CG
Sbjct: 4063 -----------RYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG 4095



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 20/152 (13%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   + P L   L     V + GG  T   +T+ G++Y  G    G LGIG  D +  P
Sbjct: 3913 EGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYATGYGAVGRLGIGGTDSVMMP 3972

Query: 332  ---ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
               E +Q  F +     V+ G KH  A+S EG + +WG G              G+LGHG
Sbjct: 3973 TLLESIQHVFVKKVA--VNSGGKHCLALSSEGHVYSWGEGDD------------GKLGHG 4018

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            N + Y  P ++      + + V+CG +H+ A+
Sbjct: 4019 NRLSYDRPKLIEELLGTEIVDVACGGHHSAAI 4050


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 136/261 (52%), Gaps = 9/261 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   +  R RP +  A E  ++  L+CG  H+L +   G V+A G    GQL
Sbjct: 46  GDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P+++  L   +++Q+S G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 106 GIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFL 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V+ L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 166 SQ-ESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNV 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR I  L+ + V   + G  H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 219 PVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHGPTAEKRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTCV 302
           L+  +     ++ CG YHT V
Sbjct: 279 LVEGIDGLVSQIDCGSYHTLV 299



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 154/310 (49%), Gaps = 20/310 (6%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G V+A G N  GQLG    + +   P  I  L+   V  +S G
Sbjct: 23  LRQAASGERHSLLLLSDGTVHACGDNSCGQLG-RRGVPHRKRPGLIQALETLNVDLLSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++   P KV+ L+GI   Q + G   S+A
Sbjct: 82  KEHSLAVCHKGRVFAWGAGSEGQLGIGE-FKELNFTPMKVKALAGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG    G+LG G+E     FL   S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 141 LSQDGQVFSWGNNSHGQLGLGKE-----FL---SQESPQRVKSLEGIPLAQVAAGGAHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
            +  +G  + +G     ++     N    + +P  I  L       + CG  HT VLT  
Sbjct: 193 ALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQD 252

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA--AISEGKILTW 364
           G+++T+G N +G LG G       P+ V+G   +  V Q+ CG  HT     +  +++++
Sbjct: 253 GKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTTRQVISF 310

Query: 365 GWGGSHGTFS 374
           G G S  T S
Sbjct: 311 GRGPSDTTSS 320



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 145/302 (48%), Gaps = 35/302 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  DG ++  G NS GQ  LG++       P  ++ L  +     +
Sbjct: 22  ELRQAASGERHSLLLLSDGTVHACGDNSCGQ--LGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   +         +TP  +K L G+K+   
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEL--------NFTPMKVKALAGIKIIQV 131

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++G+V+ +G+ +  ++     F      +R   +  +P + +V  GG H
Sbjct: 132 SCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLA-QVAAGGAH 190

Query: 300 TCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +  L+  G  + WGSN  G L +   ++ V     R  G   E  V  +SCG +HTA ++
Sbjct: 191 SFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLT 250

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFN 414
            +GK+ T+            G +S GQLGHG   +   P +V   E +  L  Q+ CG  
Sbjct: 251 QDGKVFTF------------GDNSSGQLGHGPTAEKRGPQLV---EGIDGLVSQIDCGSY 295

Query: 415 HT 416
           HT
Sbjct: 296 HT 297



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 114/237 (48%), Gaps = 28/237 (11%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P+   A     +  ++CG  H+L L++ G V++ 
Sbjct: 93  RVFA--WGAGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCGHYHSLALSQDGQVFSW 150

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 151 GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 210

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   +   +P+    P  +  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 211 LAL---SGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLG 267

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           HG  +   G         P+L++ ++G+  +I    +        +  VY++  R V
Sbjct: 268 HGPTAEKRG---------PQLVEGIDGLVSQIDCGSY--------HTLVYVYTTRQV 307



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WGN  +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 150 WGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 209

Query: 102 QLGISEN--IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N     S +P  I  LK+  VV IS G  H++ +T DG+++ +G NS+GQLG G
Sbjct: 210 QLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQDGKVFTFGDNSSGQLGHG 269

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             A K    P  VE + G+ ++     +   V V    +V+S+G G S
Sbjct: 270 PTAEKR--GPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPS 315



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 94/188 (50%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G +++ AA+G  HS  +  +G V+  GD +  ++  +   H +RP LI  L     + + 
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG    L+ +P +V+   +   + QVSCG  H+
Sbjct: 80  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKA-LAGIKIIQVSCGHYHS 138

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSC 411
            A+S +G++ +W            G++S GQLG G + +    P  V   E +   QV+ 
Sbjct: 139 LALSQDGQVFSW------------GNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAA 186

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 187 GGAHSFAL 194


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4075 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4132

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +S+ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4133 GRLGVGGSDSWSI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4191

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4192 GNRLS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4245

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4246 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4295

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4296 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4354 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLG 4400

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4401 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 142/317 (44%), Gaps = 16/317 (5%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 2970 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3029

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  I+ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 3030 KLGHGNRTTLD-KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3088

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A ++ P      C S +          Q++A+T  G V SWG G  G+LG G        
Sbjct: 3089 ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG------- 3141

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H R+
Sbjct: 3142 --SEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRK 3199

Query: 281  PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P  I+ L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G  
Sbjct: 3200 PQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG-L 3258

Query: 339  SESPVDQVSCGWKHTAA 355
                V++V+CG  H+ A
Sbjct: 3259 DAVFVNRVACGSSHSMA 3275



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4161 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMS--VADIACGS 4218

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4219 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4276

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4277 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4327

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4328 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4387

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4388 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4439



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3023 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3082

Query: 103  LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L    V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3083 LGHGDN-ATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3141

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3142 SEGSA--TPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3197

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3198 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3248

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3249 NKKPALVIGLDAVFVNRVACGSSHS 3273



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 159/348 (45%), Gaps = 53/348 (15%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +S           
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFVVSQ---------- 2962

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG+++  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 2963 DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3020

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 3021 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDIACGSSHSAAISSQGE 3071

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P L++ L  S   +V CG     T  LT  G +++WG 
Sbjct: 3072 LYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGD 3131

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
             + G LG G  +   +P  ++   S   V Q+ CG + + A++  G++ TWG G  +   
Sbjct: 3132 GDFGKLGRGGSEGSATPHEIER-LSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYY--- 3187

Query: 374  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                     +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 3188 ---------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3226



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 166/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G V+A G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 2952 GGSKSLFVVSQDGKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3010

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3011 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3068

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++         +  P+L+  L G +V   A G     +  
Sbjct: 3069 QGELYTWGLGEYGRLGHGDNAT---------QLKPKLVTALCGSRVIQVACGSRDAQTLA 3119

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3120 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3179

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3180 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3234

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3235 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4181 WGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4240

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4241 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4298

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4299 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4355

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4356 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4408

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4409 RPRLVAALQGKHIVKVTCGSAHTLALST 4436



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G  + +  P +  A + H +   AL  G AHTL LT  G VYA G  D+
Sbjct: 716 WGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDY 775

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL+PL I  L + V ++  G   S A+T +G+LY WGK S     L ++
Sbjct: 776 GKLG-NASCNSSLQPLLIECLPR-VQRVFAGSQFSLALTGEGQLYSWGKASCLGHQLVER 833

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 834 NVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQI 882



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 132/318 (41%), Gaps = 34/318 (10%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           S  RP       K  +K +AC     L L++ G +Y   ++               +PL 
Sbjct: 582 STQRPPPALLNCKFHVKQVACSKDIVLLLSKEGKLYNWHIS---------KPDTEPQPLD 632

Query: 118 ISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
              +  E   IS   H    H  A+  +   Y WG   N +LG G   ++   +PTK+E 
Sbjct: 633 FGDIGSETF-ISIASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSR--ELPTKIES 689

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L     K    G   S A+T  G + +WG G  GRLGHG          S  +  P ++ 
Sbjct: 690 LVR-RVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGI---------SDDQCLPTMVM 739

Query: 234 ELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            L+  +V   A  +G  H+ C+   G VY +GD    K+     N + +P LI  LP  +
Sbjct: 740 ALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ 799

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSC 348
            V  G   +  LT  G+LY+WG  +  CLG   ++      S  R+        +  V+ 
Sbjct: 800 RVFAGSQFSLALTGEGQLYSWG--KASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAV 857

Query: 349 GWKHTAAISE-GKILTWG 365
           G  H  A+S  G+I  WG
Sbjct: 858 GVTHCLALSSAGEIFGWG 875



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 120/269 (44%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G  D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSREL-PTKIESLVRRVKSVYCGCSYSAA 706

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    + +P  T V  L        ALG     ++ +T  
Sbjct: 707 ITLRGNLYTWGRGNYGRLGHGISDDQCLP--TMVMALKDHQVVDVALGSGDAHTLCLTNE 764

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+   +S L  L    E  PR+ +   G +  +A  G         
Sbjct: 765 GLVYAWGDGDYGKLGNASCNSSLQPL--LIECLPRVQRVFAGSQFSLALTG--------- 813

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +    +V  G  H   L+S GE++ 
Sbjct: 814 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFG 873

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P  V  P
Sbjct: 874 WGRNDNQQICPASVCSEPLLRQPILVTLP 902



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 22/227 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   SR  P    +  +  +K++ CG +++  +T  G +Y  G  ++G+
Sbjct: 665 WGTGDNRRLGHGDCHSRELPTKIESLVRR-VKSVYCGCSYSAAITLRGNLYTWGRGNYGR 723

Query: 103 L--GISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
           L  GIS++      P  +  LK  +VV ++  +G  H+  +T +G +Y WG    G+LG 
Sbjct: 724 LGHGISDD---QCLPTMVMALKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGN 780

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESS 216
               + + P+   +ECL  +  ++   G + S+A+TG G++ SWG      LGH   E +
Sbjct: 781 ASCNSSLQPL--LIECLPRV--QRVFAGSQFSLALTGEGQLYSWGKASC--LGHQLVERN 834

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           + G         PRLI  L+  ++   A G  H   +   G ++ +G
Sbjct: 835 VQGC------SVPRLITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG 875



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + +    Y+WG+ +N  LG G       P +++       V  V CG  ++A
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR--VKSVYCGCSYSA 705

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AI+  G + TWG G              G+LGHG   D   PT+V   ++ + + V+ G
Sbjct: 706 AITLRGNLYTWGRGNY------------GRLGHGISDDQCLPTMVMALKDHQVVDVALG 752


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 191/390 (48%), Gaps = 43/390 (11%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC-GGAHTLFL-TETGCVYATGLND 99
            +WG  D  +LG G   S+ +  V + F   SLK + C GG+ +LF+ T  G VYA G   
Sbjct: 2210 VWGLNDKDQLG-GPRGSKIKTPVLNEF-LSSLKVVCCAGGSKSLFVVTAEGKVYACGEGT 2267

Query: 100  FGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQ 154
             G+LG+  S+N+     P +++GL + VV+   + +G  H+ A+TVDG+++ WG+  +G+
Sbjct: 2268 NGRLGLGSSQNVDI---PKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGK 2324

Query: 155  LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
            LG L +   +    P  +E L     +  A G   S AVT  G++ +WG G  GRLGHG 
Sbjct: 2325 LGHLSRMNCEK---PRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGD 2381

Query: 214  ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKML 271
                     ST++  P+L+K L G +V   A G     +  + + G VY +GD    K+ 
Sbjct: 2382 ---------STTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLG 2432

Query: 272  FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                     P  + +L      ++ CG   +  LT  G+++TWG  +   LG G+   + 
Sbjct: 2433 RGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVR 2492

Query: 330  SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
             P+  +G      +  V+ G  H  A+++ G++  WG         ++ H   GQ G G+
Sbjct: 2493 KPQVAEG-LKGKKIIHVAVGALHCLAVTDTGQVFAWG---------DNDH---GQQGDGS 2539

Query: 389  DVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  P +V   E V+  +V+CG +H+ A
Sbjct: 2540 TTVNKKPALVQGLEGVRITRVACGSSHSTA 2569



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 150/329 (45%), Gaps = 20/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLG+G  +S   P +  + +   +K +A   GG H L L+  G VY+ G  + G
Sbjct: 3239 GYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDG 3298

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG   N      P  I  L+ KEV+ I+ G  HS+ +T  GELY WGK   G+LG G  
Sbjct: 3299 KLG-HGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDS 3357

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P     + L G      A G    Q++ ++    V SWG G  G+LG G      
Sbjct: 3358 EDQLRP--KMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG----- 3410

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P+ +  L  + V     G   S  + ++G VY +G     ++     +H 
Sbjct: 3411 ----SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV 3466

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP  ++ L   +   +  G  H    +  GE+YTWG N+ G LG G+ + +  P R+  
Sbjct: 3467 RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRP-RIVT 3525

Query: 337  PFSESPVDQVSCGWKHTAAISEGKILTWG 365
               +  +  V+CG  HT A S  K L  G
Sbjct: 3526 ALQDKKITNVACGSAHTVAWSTSKPLHAG 3554



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG   +E     V  +     SL+ +   GG  TLF +T  G +YATG    
Sbjct: 3186 WGHNHRGQLG--GIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGYGAS 3243

Query: 101  GQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI    S +    LE ++   +KK  V +++G  H+ A++V+GE+Y WG+  +G+LG
Sbjct: 3244 GRLGIGGTDSVSTPTLLESIQHVHIKK--VAVNSGGKHALALSVEGEVYSWGEGEDGKLG 3301

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G +       P  +E L G      A G   S  VT  G++ +WG G  GRLGHG    
Sbjct: 3302 HGNRTQ--CDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGD--- 3356

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P++   L+G +V   A  +G   + CI ++  V+ +GD    K+    
Sbjct: 3357 ------SEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGG 3410

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  +  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3411 SDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPR 3470

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +V        +  ++ G  H  A S+ G++ TW            G +  GQLG G    
Sbjct: 3471 KVAA-LQGKKIISIATGSLHCVACSDQGEVYTW------------GDNDEGQLGDGTTNA 3517

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P IV   ++ K   V+CG  HT A
Sbjct: 3518 IQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 161/342 (47%), Gaps = 41/342 (11%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            V+  GLND  QLG           L   +S LK  VV  + G      +T +G++Y  G+
Sbjct: 2208 VFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLK--VVCCAGGSKSLFVVTAEGKVYACGE 2265

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
             +NG+LGLG  +++ + IP +V  LS    K+ A+  G   ++A+T  GKV SWG G  G
Sbjct: 2266 GTNGRLGLG--SSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDG 2323

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGH         L   +   PRL++ L+  +++  A G  HSA +  +G +Y +G    
Sbjct: 2324 KLGH---------LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
             ++   +     RP L+  L      +V CG     T  LT  G +Y+WG  + G LG G
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG 2434

Query: 324  SID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
              +   V H+ ER+ G      V Q+ CG + + A+++ G++ TWG G            
Sbjct: 2435 GSEGCSVPHNVERLNG----QGVIQIECGAQFSLALTKAGQVWTWGKGDYF--------- 2481

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               +LGHG D     P +    +  K + V+ G  H  A+ +
Sbjct: 2482 ---RLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTD 2520



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 17/273 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+     RP V  +     +  +ACGGAH+  +T +G +Y  G   +G+
Sbjct: 3292 WGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGR 3351

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV--DGELYMWGKNSNGQLGLGK 159
            LG  ++    L P     LK   V+ ++ G   S  + +  D  ++ WG    G+LG G 
Sbjct: 3352 LGHGDSED-QLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRG- 3409

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P KV+ LS I   +   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3410 -GSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHV-- 3466

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR +  L+G K+   A G LH     + G VY +GD    ++     N  +
Sbjct: 3467 -------RRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQ 3519

Query: 280  RPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            RP +++ L   +   V CG  HT   ++   L+
Sbjct: 3520 RPRIVTALQDKKITNVACGSAHTVAWSTSKPLH 3552



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 130/284 (45%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G + AKV  +PT +E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 3181 GTIYGWGHNHRGQLG-GIEGAKV-KVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYAT 3238

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G SGRLG G   S+          TP L++ ++ V +K  A  +G  H+  +   G V
Sbjct: 3239 GYGASGRLGIGGTDSV---------STPTLLESIQHVHIKKVAVNSGGKHALALSVEGEV 3289

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+         RP +I  L   E  ++ CGG H+  +TS GELYTWG    
Sbjct: 3290 YSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRY 3349

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  +    P+          +D V+CG     T  IS+   + W WG        
Sbjct: 3350 GRLGHGDSEDQLRPKMADALKGYRVID-VACGSGDSQTLCISDDDNV-WSWG-------- 3399

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  V+   ++   +V CG   + AL
Sbjct: 3400 DGDY--GKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIAL 3441



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 32/300 (10%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            Q S G H  S   +  ++++WG N   QLG G + +K I  P   E LS +     A G 
Sbjct: 2192 QRSAGDHGGSR-EIQTKVFVWGLNDKDQLG-GPRGSK-IKTPVLNEFLSSLKVVCCAGGS 2248

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
            +    VT  GKV + G G +GRLG G   ++           P+ +  L    VK  A  
Sbjct: 2249 KSLFVVTAEGKVYACGEGTNGRLGLGSSQNV---------DIPKQVNGLSQYVVKKVAVH 2299

Query: 245  AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            +G  H+  +  +G+V+ +G+    K+      +  +P L+  L      ++ CG  H+  
Sbjct: 2300 SGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAA 2359

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS---EG 359
            +TS GELYTWG  E G LG G       P+ V+    +  V QV+CG +    ++   EG
Sbjct: 2360 VTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKR-VIQVACGSRDAQTLTLTDEG 2418

Query: 360  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             + +WG     G F        G+LG G       P  V        +Q+ CG   + AL
Sbjct: 2419 MVYSWG----DGDF--------GKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLAL 2466


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 160/350 (45%), Gaps = 29/350 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G+LG+G      + P  C+ F    LK + CGG H++FL   G VY  G N  G
Sbjct: 4   WGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCG 63

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG ++     + P  +  L  +++  +S G  HS A+   G+++ WG    GQLGLG  
Sbjct: 64  QLGHNKP---GITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTT 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              V  IP  ++ L      Q   G +  +A++  G++ +WG   SG+LG G+       
Sbjct: 121 ETAV-RIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEP---- 175

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S+  P+ +K L G+ +    AG  HS  +  +G V+ +G     ++   +      
Sbjct: 176 ----SKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAV 231

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  I K   S++VV   CG  HT  LT  G L+T+G    G LG GS      P RV   
Sbjct: 232 PCHI-KFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANELLPRRVL-E 289

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              + V Q++CG  HT A          +  S G     G +S GQLG G
Sbjct: 290 LMGTEVSQITCGRHHTLA----------FAPSSGGVYAFGCNSHGQLGTG 329



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 32/325 (9%)

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLGI        EP   +    + + +I  G  HS  +  DG +Y  G NS GQLG  K
Sbjct: 10  GQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNK 69

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V  L        + G   S+AV   G+V +WGAG  G+LG G       
Sbjct: 70  PGIT----PEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQLGLGTTE---- 121

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T+   PRLIK L   ++     G  H   + ++G+++ +G     ++   +G  ++
Sbjct: 122 ----TAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSK 177

Query: 280 R-PSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P  +  L   P ++ +  GG H+  L+  G ++ WG N+ G LG+  I     P  ++
Sbjct: 178 LFPQPLKSLAGIPLAK-ITAGGDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIK 236

Query: 336 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
              S+  V  +SCG +HTAA++ +G + T+G G            S GQLGHG+  + + 
Sbjct: 237 FLRSQKVV-HISCGEEHTAALTKDGGLFTFGDG------------SWGQLGHGSTANELL 283

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           P  V      +  Q++CG +HT A 
Sbjct: 284 PRRVLELMGTEVSQITCGRHHTLAF 308



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 28/277 (10%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WGK  +GQLG+G +   +   P      +G   K+   G + SV +   G V + G+   
Sbjct: 4   WGKAKDGQLGIGVERNPMFE-PRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNSC 62

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH +              TP  +  L+  K+ + + G  HS  ++E G+V+ +G   
Sbjct: 63  GQLGHNKPG-----------ITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGE 111

Query: 267 VDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++ L       R P LI +L      +V+CG  H   L+  G+L+TWG N +G LG+G
Sbjct: 112 EGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLG 171

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
             +      +     +  P+ +++ G  H+ A+S  G +  WG             +  G
Sbjct: 172 KGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWG------------KNKAG 219

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           QLG  +  D   P  + F  + K + +SCG  HT AL
Sbjct: 220 QLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAAL 256



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 3/136 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGL  ++ R  P          +  ++CG  HT  LT+ G ++  G   +GQ
Sbjct: 213 WGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQ 272

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
           LG   +    L P R+  L   EV QI+ G HH+ A     G +Y +G NS+GQLG G  
Sbjct: 273 LG-HGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTGVL 331

Query: 161 AAKVIPIPTKVECLSG 176
           +A   P P K   LSG
Sbjct: 332 SADKSPYPLKTSFLSG 347


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 181/363 (49%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 205 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 263

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 264 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 322

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 323 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 373

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 374 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 433

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V ++S G  H A ++
Sbjct: 434 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 492

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   ++CGFN T
Sbjct: 493 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 540

Query: 417 GAL 419
            A+
Sbjct: 541 MAI 543



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 44/320 (13%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 146 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 203

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 204 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 254

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L+  G+  +R        +        
Sbjct: 255 TRVKAIAFGAKHTCAVSISGELYEWGEGTHCLGLW--GDQYQRSQWFPHKLFGPLDGISI 312

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            ++ CG +HT +++S G+L+ +G    G LG G    +  P++V+          ++CG 
Sbjct: 313 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVES-LKGVRAKAIACGP 371

Query: 351 KHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            HTAAI E           GK+ TW            G +  G+LGH +    + PT V 
Sbjct: 372 WHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMKLVPTCVE 419

Query: 400 FGENVKALQVSCGFNHTGAL 419
              +    QVSC    T  L
Sbjct: 420 PLNDFDFAQVSCAKAQTIVL 439



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 396 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 455

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 456 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 511

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 512 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 543



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 43/337 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 227 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 286

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+L+ +G  + G L
Sbjct: 287 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQLFAYGDGTFGVL 342

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 343 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 400

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 401 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 451

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 452 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 507

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           LG+G       P  V+    +  V  ++CG+  T AI
Sbjct: 508 LGLGDYVDRSYPTLVEA-LEDKQVHSIACGFNFTMAI 543



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 29/291 (9%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKV 198
           D + YM  K +   +   K + + I +  K+  + ++ +  ++++ G   +   T    +
Sbjct: 112 DLDYYM-EKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDI 170

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             WG      L HG  S     L       PRL+     + V+  A G  H+A + + G 
Sbjct: 171 FVWGEVPGNVLDHGDVSKANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGE 223

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P +I  L  +  + +  G  HTC ++  GELY WG   
Sbjct: 224 VFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGT 283

Query: 317 NGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
           + CLG+       S   P ++ GP     + +++CG  HTA IS  G++  +G     GT
Sbjct: 284 H-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYG----DGT 338

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           F        G LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 339 F--------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 381


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 181/363 (49%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++++ACG  H   +T+ G V++ G+++ G+LG   ++  S +P  I  L    V+ I+ G
Sbjct: 207 VQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVS-DPKIIESLASTRVKAIAFG 265

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGL-GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
             H+ A+++ GELY WG+ ++  LGL G +  +    P K+   L GI   + A G   +
Sbjct: 266 AKHTCAVSISGELYEWGEGTHC-LGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHT 324

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             ++  G++ ++G G  G LGHG   ++           P+ ++ L+GV+ K  A G  H
Sbjct: 325 AIISSAGQLFAYGDGTFGVLGHGDTLTVA---------RPKQVESLKGVRAKAIACGPWH 375

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           +A I E          +G+++ +GD    K+   +      P+ +  L   +  +V C  
Sbjct: 376 TAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAK 435

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             T VLT  G ++T GS E+G LG   +    S   ++GP     V ++S G  H A ++
Sbjct: 436 AQTIVLTITGVVFTIGSKEHGRLG-NPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLT 494

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             GK+ TWG G            + GQLG G+ VD  +PT+V   E+ +   ++CGFN T
Sbjct: 495 MNGKVFTWGKG------------TEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFT 542

Query: 417 GAL 419
            A+
Sbjct: 543 MAI 545



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 134/320 (41%), Gaps = 44/320 (13%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           I+ L K+  + S G H +   T   ++++WG+     L  G  +   + +P  +     I
Sbjct: 148 ITQLPKQ--KSSEGLHVAYGATSLKDIFVWGEVPGNVLDHGDVSKANVSLPRLLNTTHII 205

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +  A G + +  VT  G+V SWG    GRLGH           S S   P++I+ L  
Sbjct: 206 DVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKV---------SVSVSDPKIIESLAS 256

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            +VK  A G  H+  +  +G +Y +G+      L   G+  +R        +        
Sbjct: 257 TRVKAIAFGAKHTCAVSISGELYEWGEGT--HCLGLWGDQYQRSQWFPHKLFGPLDGISI 314

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            ++ CG +HT +++S G+L+ +G    G LG G    +  P++V+          ++CG 
Sbjct: 315 LKIACGHWHTAIISSAGQLFAYGDGTFGVLGHGDTLTVARPKQVES-LKGVRAKAIACGP 373

Query: 351 KHTAAISE-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            HTAAI E           GK+ TW            G +  G+LGH +    + PT V 
Sbjct: 374 WHTAAIVERMGTVKSNAPSGKLFTW------------GDADRGKLGHADKKMKLVPTCVE 421

Query: 400 FGENVKALQVSCGFNHTGAL 419
              +    QVSC    T  L
Sbjct: 422 PLNDFDFAQVSCAKAQTIVL 441



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG    + +  P             ++C  A T+ LT TG V+  G  + G+
Sbjct: 398 WGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSKEHGR 457

Query: 103 LG--ISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG  +SE+    L    I G LK E V +IS+G  H + +T++G+++ WGK + GQLGLG
Sbjct: 458 LGNPLSEDTSICL----IEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQLGLG 513

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
               +    PT VE L        A GF  ++A+
Sbjct: 514 DYVDR--SYPTLVEALEDKQVHSIACGFNFTMAI 545



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 139/337 (41%), Gaps = 43/337 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG     S   P +  +     +KA+A G  HT  ++ +G +Y    G +  
Sbjct: 229 WGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGTHCL 288

Query: 101 G----QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G    Q   S+   + L  PL   G+   +++I+ G+ H++ I+  G+L+ +G  + G L
Sbjct: 289 GLWGDQYQRSQWFPHKLFGPL--DGI--SILKIACGHWHTAIISSAGQLFAYGDGTFGVL 344

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGG 205
           G G      +  P +VE L G+  K  A G   + A+             GK+ +WG   
Sbjct: 345 GHGDTL--TVARPKQVESLKGVRAKAIACGPWHTAAIVERMGTVKSNAPSGKLFTWGDAD 402

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH  +   L          P  ++ L        +     +  +   G V+  G +
Sbjct: 403 RGKLGHADKKMKL---------VPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFTIGSK 453

Query: 266 AVDKMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
              ++    GN     + I       K  +  E+  G  H  VLT  G+++TWG    G 
Sbjct: 454 EHGRL----GNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 509

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           LG+G       P  V+    +  V  ++CG+  T AI
Sbjct: 510 LGLGDYVDRSYPTLVEA-LEDKQVHSIACGFNFTMAI 545



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 128/291 (43%), Gaps = 29/291 (9%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKV 198
           D + YM  K +   +   K + + I +  K+  + ++ +  ++++ G   +   T    +
Sbjct: 114 DLDYYM-EKVTPDVVNRVKHSCRDIKVADKLNEQIITQLPKQKSSEGLHVAYGATSLKDI 172

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             WG      L HG  S     L       PRL+     + V+  A G  H+A + + G 
Sbjct: 173 FVWGEVPGNVLDHGDVSKANVSL-------PRLLNTTHIIDVQSVACGEKHAAIVTKQGE 225

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P +I  L  +  + +  G  HTC ++  GELY WG   
Sbjct: 226 VFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWGEGT 285

Query: 317 NGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
           + CLG+       S   P ++ GP     + +++CG  HTA IS  G++  +G     GT
Sbjct: 286 H-CLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLFAYG----DGT 340

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           F        G LGHG+ +    P  V   + V+A  ++CG  HT A++E +
Sbjct: 341 F--------GVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERM 383


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 177/373 (47%), Gaps = 42/373 (11%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
           WR     AF+ + LK    G + T    F+     +YA G N+FGQLGI  +I  YS + 
Sbjct: 2   WR----RAFQ-NCLKIAFIGSSVTFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + I    ++V+ ++     S+AI   G+LY WG++  G LG G+   + I +P+ V+CL 
Sbjct: 57  VPI----QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINVPSLVQCLK 110

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
            +  K  A G     A+T  G++ +WG    G+LGH  ++S     R   EY   L    
Sbjct: 111 HLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQKNLGSAK 170

Query: 232 IKELE--GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
           + EL     KV+  A G   +  + E+G VY  G      + +Q  N    P+   I  L
Sbjct: 171 LPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKKGILGYQTKN-VDEPTFKQIPDL 229

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
               ++  G   +  L S G ++ WGSN  G LG  S  V+ +P++++G      + Q S
Sbjct: 230 KNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVVQTPQQIKG---LPKIKQFS 286

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
           CG +   A+S +G + TWG+GG             GQLG  +  D   P  + F +N+  
Sbjct: 287 CGEQFIGALSTDGVLYTWGFGGD------------GQLGTPSKQDIPTPHKIQFDQNID- 333

Query: 407 LQVSCGFNHTGAL 419
            +VSCG  H G +
Sbjct: 334 -KVSCGQAHVGIV 345



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 188/400 (47%), Gaps = 56/400 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG+G+  S++ P +        +  +AC  + +  + ++G +Y  G + FG 
Sbjct: 35  WGWNNFGQLGIGNSISQYSPQLVPI---QDVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91

Query: 103 LG--ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    ENI     P  +  LK  +   ++ G +H +AIT DG+LY WG   +G+LG   
Sbjct: 92  LGNGQVENINV---PSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSF 148

Query: 160 KAAKVIPIPTKVECLSGI-------------FTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             +  +P   K E    +               +Q ALG + ++ ++  G V S G    
Sbjct: 149 DNSAKLPSREKYEYQKNLGSAKLPELVQLNFKVQQVALGDQFTIILSEDGNVYSVGLNKK 208

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LG+          ++  E T + I +L+ + V+I + G   S  +D +G ++ +G   
Sbjct: 209 GILGYQ--------TKNVDEPTFKQIPDLKNI-VQIDS-GTDFSVALDSDGNMFAWGSNY 258

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++     +  + P  I  LP  ++  CG      L++ G LYTWG   +G LG  S  
Sbjct: 259 FGQLGTPSPSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGFGGDGQLGTPSKQ 318

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
            + +P ++Q  F ++ +D+VSCG  H   +S+ K+   G G              GQLG 
Sbjct: 319 DIPTPHKIQ--FDQN-IDKVSCGQAHVGIVSKNKLYMHGRGKE------------GQLGR 363

Query: 387 GNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 421
           G++ +  +     P +V   ENV  ++++CG +H+ A++ 
Sbjct: 364 GSETESPNSSRYSPLLVM--ENV--IKIACGGSHSFAVVN 399


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 34/338 (10%)

Query: 92  VYATGLNDFGQLGIS---ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
           V++ G    GQLGIS   +++     P  +  L  K++ +IS G  H+  +  DG + M 
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  GQLG  +  +++  +P        +   Q + G + ++AVT  G+VL WG    G
Sbjct: 63  GANDRGQLGQDRPGSELAHVPAT----ETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRG 118

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G       L    S  +  PR +K L   +V   A G +HS  +  +GR++ +GD + 
Sbjct: 119 QCG-------LSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSF 171

Query: 268 DKM-LFQEGNHARR--PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++ +   G    R  P  +S LP      + CGG+H+  L+  G ++ WG N  G LG+
Sbjct: 172 GQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGL 231

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
           G+ +   SP  ++       V  ++CG  +TA ++  G +  +G G            S 
Sbjct: 232 GTTEDRVSPTPLKN-LKTKQVKYIACGQNYTAILTASGGLFLFGQG------------SE 278

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           GQLGHG+  + ++P  V      +  QV+CG  HT  L
Sbjct: 279 GQLGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 157/354 (44%), Gaps = 27/354 (7%)

Query: 43  WGNGDYGRLGLGSL----ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG    G+LG+  L     S   P    A     ++ ++CG  HT  L   G V   G N
Sbjct: 6   WGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMCGAN 65

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           D GQLG  +  G  L    +   +  V+ Q+S G  H+ A+T  G++  WG+N  GQ GL
Sbjct: 66  DRGQLG-QDRPGSELA--HVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGL 122

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++    P  ++ LS     Q A G   S+A+T  G++ +WG    G+LG G     
Sbjct: 123 STGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPG-- 180

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               R+     P+ +  L GV ++  A G  HS  +  +G V+ +G     ++       
Sbjct: 181 ----RTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTED 236

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P+ +  L   +   + CG  +T +LT+ G L+ +G    G LG GS     +P  VQ
Sbjct: 237 RVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQ 296

Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           G F  S + QV+CG +HT  +           G  G F   G  S GQLG  ND
Sbjct: 297 G-FLGSEITQVACGRQHTLVLE----------GRTGRFFSLGQGSKGQLGLDND 339



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 32/349 (9%)

Query: 27  CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           C  W S  L    A   WG  + G+LGLG+ E R  P      +   +K +ACG  +T  
Sbjct: 204 CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAI 263

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAIT-VDGE 143
           LT +G ++  G    GQLG   +    + P  + G L  E+ Q++ G  H+  +    G 
Sbjct: 264 LTASGGLFLFGQGSEGQLGHGSH-SNEVNPRSVQGFLGSEITQVACGRQHTLVLEGRTGR 322

Query: 144 LYMWGKNSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQSVAVTG----GGK 197
            +  G+ S GQLGL   ++K    P+P   E  S   + +     E+S ++ G    GG 
Sbjct: 323 FFSLGQGSKGQLGLDNDSSKSCASPVPGPWEAPS---STEGCSNGEESRSIIGSIFAGGD 379

Query: 198 ----VLSWGAGGSGRLGHGQ-----ESSIL--GFLRSTSEYTPRL--IKELEGVKVKIAA 244
               ++S G      L   +     E  +L    L+  SE +P L   K ++ +++ +++
Sbjct: 380 QSFCIVSRGNDPDHPLDFREAIPSIEPVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSS 439

Query: 245 AGFLHSACI--DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              L+++ +    +G +++FG  +  ++     ++   P  +     +E  +V CG  HT
Sbjct: 440 PACLNASFLVGAGSGGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHT 499

Query: 301 CVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VL    G  Y+ G    G LG+ +         V GP+ E+P     C
Sbjct: 500 LVLEGRTGGFYSLGQGSKGQLGLDNGSSKSCASLVPGPW-EAPSSTEGC 547



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 20/118 (16%)

Query: 309 LYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 363
           +++WG  ++G LGI      +  L SP  V    +   + ++SCG +HT  +  +G ++ 
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPA-LAGKQIREISCGLRHTCVLLRDGTVMM 61

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G     G   +D    G +L H           V   E +   QVSCG +HT A+ +
Sbjct: 62  CG-ANDRGQLGQD--RPGSELAH-----------VPATETLVITQVSCGNDHTLAVTD 105


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 157/334 (47%), Gaps = 30/334 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 286 WGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNA 345

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 346 GLLGHGSTVSHWI-PKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDGTFGALGHG 404

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------GGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   S AV            GK+ +WG G   RL
Sbjct: 405 NR--ETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRL 462

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  S+ L          P  +  L       +A G   +  +  +G ++  G  +V  
Sbjct: 463 GHGDRSAKL---------KPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGS-SVYG 512

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+          EV CG YH  VLT+ GE+YTWG   NG LG G I 
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIA 572

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
               P  V+    +  V +++CG   TAAIS+ K
Sbjct: 573 DRKVPTLVEA-LRDRSVKRIACGSSFTAAISQHK 605



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 170/367 (46%), Gaps = 49/367 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQI-STGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V+I + G  
Sbjct: 267 VACGVKHAALITRQAEVFTWGEECSGRLG--HGAGTSIFQPRLLESLSICNVEIIACGEF 324

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
           H+ A+T  G+LY WG  ++    LG  +     IP +V   L G+     + G   +  +
Sbjct: 325 HTCAVTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALI 384

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  HSA 
Sbjct: 385 TSSGQLYTFGDGTFGALGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHSAA 435

Query: 253 IDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVVCG 296
           + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  +  CG
Sbjct: 436 VVEVIMTQSNASSGKLFTWGDG--DKYRLGHGDRSAKLKPTCVPSLID---YNFHKSACG 490

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G ++T GS+  G LG  + D  + P  V+       V +V+CG  H A +
Sbjct: 491 HTLTIGLTTSGHMFTVGSSVYGQLGNPNNDGRY-PRLVEDKVGGGGVVEVACGSYHVAVL 549

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +  G++ TWG G +            G+LGHG+  D   PT+V    +    +++CG + 
Sbjct: 550 TNTGEVYTWGKGAN------------GRLGHGDIADRKVPTLVEALRDRSVKRIACGSSF 597

Query: 416 TGALLEY 422
           T A+ ++
Sbjct: 598 TAAISQH 604



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 49/282 (17%)

Query: 142 GELYMWGK---------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           G++Y+WG+          S+G +  G  A   I +P  +E    +     A G + +  +
Sbjct: 219 GDVYVWGEVMCDTTSRSGSDGNVH-GPGATTDILVPKPLESNVMLDVSYVACGVKHAALI 277

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T   +V +WG   SGRLGHG  +SI         + PRL++ L    V+I A G  H+  
Sbjct: 278 TRQAEVFTWGEECSGRLGHGAGTSI---------FQPRLLESLSICNVEIIACGEFHTCA 328

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSG 306
           +   G +Y +GD   +  L   G+      P  +S  P        V CG +HT ++TS 
Sbjct: 329 VTATGDLYTWGDGTHNAGLLGHGSTVSHWIPKRVSG-PLEGLQVSTVSCGTWHTALITSS 387

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
           G+LYT+G    G LG G+ + +  P+ V+       +  VSCG  H+AA+ E        
Sbjct: 388 GQLYTFGDGTFGALGHGNRETISYPKEVESLKGLRTI-SVSCGVWHSAAVVEVIMTQSNA 446

Query: 359 --GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             GK+ TWG G  +            +LGHG+    + PT V
Sbjct: 447 SSGKLFTWGDGDKY------------RLGHGDRSAKLKPTCV 476



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 106/217 (48%), Gaps = 17/217 (7%)

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G + ++ G   +T    P+ ++    + V   A G  H+A I     V+ +G+    ++ 
Sbjct: 236 GSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAALITRQAEVFTWGEECSGRLG 295

Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDV 327
              G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS   
Sbjct: 296 HGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSTVS 355

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              P+RV GP     V  VSCG  HTA I S G++ T+G     GTF        G LGH
Sbjct: 356 HWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFG----DGTF--------GALGH 403

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GN     +P  V   + ++ + VSCG  H+ A++E +
Sbjct: 404 GNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVI 440


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ +ACG  H   +T+ G V++ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368

Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +  +G LG GK  +  +P       L G+     + G   +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++++CG  H 
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEELACGAYHV 595

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   ++CG
Sbjct: 596 AVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQVKSIACG 643

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 644 TNFTAAI 650



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P R++G  +   +  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G +Y  G   
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG GS D  ++P  V+    +  V  ++CG   TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 650



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E +  +  +  A G   +  VT  G+V SWG    GRLGHG +S           
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           + P+LI  L  + +++ A G  H+  +  +G +Y +GD   +  L   G       P  +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  D +  P  V+      
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLR 468

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 469 TV-RAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK------------GRLGHGD 515

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 516 KEARLVPTCVAALVEPNFCQVACGHSLTVAL 546



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 26/222 (11%)

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           R+G   +S I   L       P+ ++ +  + V+  A G  H+A + + G V+ +G+   
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337

Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
            ++     + A  P LI  L     E V CG YHTC +T  G+LYTWG  +  +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397

Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 381
             DV H  P+RV GP     +  +SCG  HTA + S GK+ T+G     GTF        
Sbjct: 398 K-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG----DGTF-------- 444

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           G LGHG+      P  V   + ++ ++ +CG  HT A++E +
Sbjct: 445 GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 177/367 (48%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ +ACG  H   +T+ G V++ G    G+LG   +   +  P  I  L    ++ ++ G
Sbjct: 310 VQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGD-SDAHHPKLIDALSNLNIELVACG 368

Query: 132 YHHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H+ A+T+ G+LY WG  +  +G LG GK  +  +P       L G+     + G   +
Sbjct: 369 EYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV-TGPLQGLHISSISCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  GK+ ++G G  G LGHG   SI           PR ++ L+G++   AA G  H
Sbjct: 428 ALVTSAGKLFTFGDGTFGVLGHGDRDSI---------SIPREVESLKGLRTVRAACGVWH 478

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PYSEEV 293
           +A + E            +G+++ +GD   DK     G+   R  P+ ++ L  P   +V
Sbjct: 479 TAAVVEVIIGNPNSNNNSSGKLFTWGDG--DKGRLGHGDKEARLVPTCVAALVEPNFCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D    P RV+G  S+S V++++CG  H 
Sbjct: 537 ACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADG-KLPARVEGKLSKSFVEELACGAYHV 595

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   ++CG
Sbjct: 596 AVLTSRTEVYTWGKGAN------------GRLGHGSTDDRNTPTLVEALKDKQVKSIACG 643

Query: 413 FNHTGAL 419
            N T A+
Sbjct: 644 TNFTAAI 650



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 156/340 (45%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 332 WGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P R++G  +   +  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 392 GLLGHGKDVSHWV-PKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +  I IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 451 DRDS--ISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK 508

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  L        A G   +  +  +G +Y  G   
Sbjct: 509 GRLGHGDKEARL---------VPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGS-- 557

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG   
Sbjct: 558 --PVYGQLGN----PQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGA 611

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG GS D  ++P  V+    +  V  ++CG   TAAI
Sbjct: 612 NGRLGHGSTDDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 650



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 40/271 (14%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E +  +  +  A G   +  VT  G+V SWG    GRLGHG +S           
Sbjct: 298 LPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDA--------- 348

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           + P+LI  L  + +++ A G  H+  +  +G +Y +GD   +  L   G       P  +
Sbjct: 349 HHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRV 408

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT ++TS G+L+T+G    G LG G  D +  P  V+      
Sbjct: 409 TGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLR 468

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V + +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 469 TV-RAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDK------------GRLGHGD 515

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + PT V         QV+CG + T AL
Sbjct: 516 KEARLVPTCVAALVEPNFCQVACGHSLTVAL 546



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%), Gaps = 26/222 (11%)

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           R+G   +S I   L       P+ ++ +  + V+  A G  H+A + + G V+ +G+   
Sbjct: 285 RVGSSFDSKIDSLL-------PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYG 337

Query: 268 DKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIG 323
            ++     + A  P LI  L     E V CG YHTC +T  G+LYTWG  +  +G LG G
Sbjct: 338 GRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHG 397

Query: 324 SIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 381
             DV H  P+RV GP     +  +SCG  HTA + S GK+ T+G     GTF        
Sbjct: 398 K-DVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG----DGTF-------- 444

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           G LGHG+      P  V   + ++ ++ +CG  HT A++E +
Sbjct: 445 GVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVI 486


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 161/341 (47%), Gaps = 32/341 (9%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LG+G +E           W+P          L+ +ACG  HTLFLT  G VY
Sbjct: 6   WGNASHGQLGMGGIEDEQILIPSQIPWKP-------DAPLRQIACGHRHTLFLTANGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND  QLG   N+  +  PL I  L+   VV I+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGNNDQAQLG--HNLP-TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG     + +I +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGQSTDQS-IIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVK 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
               +     S   Y  RL   L G+ +   A G  HS  I ++  V+ FG     ++  
Sbjct: 175 PPQEL-----SHCNYPLRLTT-LLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            + ++   P+ +  L       V CG   +  LT+ G ++T G+   G LG GS      
Sbjct: 229 NDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEML 288

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
           P R+      S + QV+CG +HT A+  S G++  +G G S
Sbjct: 289 P-RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 328



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 143/306 (46%), Gaps = 17/306 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D  +LG  +L ++ RP++    + + + A+ACG  H++ LTE G V + G ND GQL
Sbjct: 61  GNNDQAQLG-HNLPTK-RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G S +      P  I  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   + 
Sbjct: 119 GQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQE 178

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++    V  +G    G+LG   ES      
Sbjct: 179 LSHCNYPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDES------ 232

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P  +K L  + V+  A G   S  +   G V+  G     ++      +   P
Sbjct: 233 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S + +  P+ V GP+
Sbjct: 290 RMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEVLGPW 349

Query: 339 SESPVD 344
             SP D
Sbjct: 350 V-SPSD 354



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 131/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           +L+ WG  S+GQLG+G    + I IP+++        +Q A G   ++ +T  GKV + G
Sbjct: 2   DLFCWGNASHGQLGMGGIEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
                +LGH   +             P LI EL+   V   A G  HS  + E G+V  +
Sbjct: 62  NNDQAQLGHNLPTK-----------RPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSW 110

Query: 263 GD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD       ++ D+ + +     R  SL+SK  +  ++ CG  H+  LTS GELY+WGSN
Sbjct: 111 GDNDCGQLGQSTDQSIIELPKIIR--SLVSK--HVVQIACGNNHSLALTSCGELYSWGSN 166

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+     L   + P R+       P+  ++CG  H+  IS+   + +G+      
Sbjct: 167 IYGQLGVKPPQELSHCNYPLRLTTLLG-IPLATIACGGNHSFLISKSSAV-FGF------ 218

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 ----GRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACG 254



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  + G+LGL    +R  P          ++ +ACG   ++FLT  G V+  G   +GQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG   N    L  + +  +   + Q++ G  H+ A+    G +Y +G  S+GQ  LG ++
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGNRS 335

Query: 162 AKVIPIPTKV 171
              + +P +V
Sbjct: 336 TNSVTLPQEV 345


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/393 (31%), Positives = 163/393 (41%), Gaps = 32/393 (8%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           ST    F   WG  D G+LG GS      P+  S     ++ A+A G  H+L LT  G V
Sbjct: 50  STAVSEFLLAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTSAGTV 109

Query: 93  YATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            A G N FGQLG    I  S  P+ +S      V  ++ G  HS A+T  G +  WG N 
Sbjct: 110 LAWGTNHFGQLGDGTLIDRS-APVEVSLPPGTTVTAVAAGGVHSMALTSVGTVLAWGGNG 168

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G    +  P+  +    SG+     A     S+AVT  G  L+WG  G+G+LG 
Sbjct: 169 VGQLGDGSTTRRTTPV--EAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGD 226

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G          + +  TP  +    G +V   AAG LHS  +   G    +G     ++ 
Sbjct: 227 GS---------TINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNGTGQL- 276

Query: 272 FQEGNHARRPSLIS-KLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
             +G    R + +S  LP   E   VV G  H+  LT+ G    WG N  G LG G    
Sbjct: 277 -GDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSN 335

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
                 V  P   +     S    HT AI+ +G  L WG       F        GQLG 
Sbjct: 336 SSEAVEVSLPTGTTLAAIASRDSDHTIAIAGDGTALAWG----SNIF--------GQLGD 383

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G   +   P  V     +  L  + G +HT AL
Sbjct: 384 GTTTNPSTPVPVALPTGITLLTTAAGSDHTLAL 416



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 115/292 (39%), Gaps = 31/292 (10%)

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H   +  V   L  WGKN NGQLG G      +PI   V    G      A G   S+A+
Sbjct: 46  HKPGSTAVSEFLLAWGKNDNGQLGNGSTTGSNVPI--AVSLPLGTTVTAVAAGRFHSLAL 103

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G VL+WG    G+LG G                P  +    G  V   AAG +HS  
Sbjct: 104 TSAGTVLAWGTNHFGQLGDGTL---------IDRSAPVEVSLPPGTTVTAVAAGGVHSMA 154

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGE 308
           +   G V  +G   V ++   +G+  RR + +  +  S      V     H+  +TS G 
Sbjct: 155 LTSVGTVLAWGGNGVGQL--GDGSTTRRTTPVEAILPSGVTVTAVAAAESHSLAVTSAGA 212

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
              WG N  G LG GS     +P  V  P     V  ++ G  H+ A+ S G  L WG+ 
Sbjct: 213 ALAWGLNGTGQLGDGSTINRSTPVSVALPLGTE-VTAIAAGRLHSLAVTSVGAALAWGYN 271

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G+            GQLG G  ++   P  V      +   V  G  H+ AL
Sbjct: 272 GT------------GQLGDGTTINRSTPVSVALPLGAEVTAVVAGRLHSAAL 311


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 1802 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 1859

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 1860 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 1918

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 1919 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 1972

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 1973 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 2022

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 2023 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 2080

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 2081 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 2127

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 2128 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/319 (31%), Positives = 145/319 (45%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 790  GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 849

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  ++ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 850  KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 908

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++ P    V  L+G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 909  ATQLKP--KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 961

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H 
Sbjct: 962  ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 1017

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P  I  L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G
Sbjct: 1018 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 1077

Query: 337  PFSESPVDQVSCGWKHTAA 355
                  V++V+CG  H+ A
Sbjct: 1078 -LDAVFVNRVACGSSHSIA 1095



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 1888 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 1945

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 1946 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 2003

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 2004 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 2054

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 2055 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 2114

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 2115 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 2166



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 843  WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 902

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 903  LGHGDN-ATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 961

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 962  SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 1017

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 1018 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 1068

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 1069 NKKPALVIGLDAVFVNRVACGSSHS 1093



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 59/351 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +S           
Sbjct: 734  VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 782

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG++Y  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 783  DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 840

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 841  FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAISSQGE 891

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P L++ L      +V CG     T  LT  G +++WG 
Sbjct: 892  LYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 951

Query: 315  NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
             + G LG G     D  H  ER+ G      V Q+ CG + + A++  G++ TWG G  +
Sbjct: 952  GDFGKLGRGGSEGSDTPHEIERLSG----IGVVQIECGAQFSLALTRAGEVWTWGKGDYY 1007

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 1008 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 1046



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 166/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 772  GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 830

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 831  ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 888

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++ L          P+L+  L G +V   A G     +  
Sbjct: 889  QGELYTWGLGEYGRLGHGDNATQL---------KPKLVTALAGRRVVQVACGSRDAQTLA 939

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 940  LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 999

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 1000 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 1054

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 1055 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 1908 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 1967

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 1968 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 2025

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 2026 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 2082

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 2083 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 2135

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 2136 RPRLVAALQGKHIVKVTCGSAHTLALST 2163



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 99/220 (45%), Gaps = 20/220 (9%)

Query: 199  LSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            LSWG G S   G G      LG L  +   TP   + L  ++    A G      +  +G
Sbjct: 1791 LSWG-GASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDG 1849

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWG 313
            +++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+Y WG
Sbjct: 1850 KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWG 1909

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 372
              E+G LG G+      P+ V+   +   V  ++CG  H+AAI+  G +LTWG G     
Sbjct: 1910 EGEDGKLGHGNRMSYDRPKLVEH-LNGMSVADIACGSAHSAAITASGHVLTWGKG----- 1963

Query: 373  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                     G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 1964 -------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 1996


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 163/353 (46%), Gaps = 47/353 (13%)

Query: 34  TLQRRFAAL---------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
           +L R+ AAL         WG G  G+LG         P +  + +   +K++ACG   T 
Sbjct: 311 SLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTC 370

Query: 85  FLTETGCVYATGLNDFG-QLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVD 141
            LT++G +YA G N +G  LG  E       P RISG    V  + ++ G  H++ ++  
Sbjct: 371 ALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSS 430

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------- 194
           G+L+ +G  S G LG G   +  +  P +VE L G+  K  A G   + A+         
Sbjct: 431 GQLFTYGDGSFGVLGHGNLLS--VSQPKEVESLKGLLVKSVACGSWHTAAIVDIIVDRFK 488

Query: 195 ----GGKVLSWGAGGSGRLGHGQ-ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
               GGK+ +WG G  GRLGH   E  +L          P  + +L  +     + G + 
Sbjct: 489 FNGVGGKLFTWGDGDKGRLGHADLEKKLL----------PTCVAQLVELDFDQVSCGRML 538

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGN-HARRPSLIS-----KLPYSEEVVCGGYHTCVL 303
           +  +   G+VY  G     ++    GN HA+  S++      K  + +E+  G YH   L
Sbjct: 539 TVALTNTGKVYTMGSSVHGQL----GNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           TS G LYTWG   NG LG+G+++  + P  V+    +  V  ++CG   TAAI
Sbjct: 595 TSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEA-LRDMQVQSIACGSNLTAAI 646



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 173/364 (47%), Gaps = 47/364 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHH 134
           ++ G  H   +T+ G V+  G    G+LG   ++  S  P  +  L    V  ++ G + 
Sbjct: 310 ISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPKMVESLDGVHVKSVACGEYQ 368

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
           + A+T  GELY WG+N  G     ++ ++   +P ++   L+G+     A G   +  V+
Sbjct: 369 TCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVS 428

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ ++G G  G LGHG        L S S+  P+ ++ L+G+ VK  A G  H+A I
Sbjct: 429 SSGQLFTYGDGSFGVLGHGN-------LLSVSQ--PKEVESLKGLLVKSVACGSWHTAAI 479

Query: 254 DE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHT 300
            +            G+++ +GD    ++   +      P+ +++L     ++V CG   T
Sbjct: 480 VDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGRMLT 539

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPER----VQGPFSESPVDQVSCGWKHTAAI 356
             LT+ G++YT GS+ +G LG       H+ ++    V+G   E  V ++S G  H AA+
Sbjct: 540 VALTNTGKVYTMGSSVHGQLGNP-----HAKDKSIVIVEGKLKEEFVKEISSGSYHVAAL 594

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S G + TWG G            + GQLG GN  D   PT+V    +++   ++CG N 
Sbjct: 595 TSSGSLYTWGKG------------TNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNL 642

Query: 416 TGAL 419
           T A+
Sbjct: 643 TAAI 646



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 20/233 (8%)

Query: 198 VLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           VL WG G   G +G           +      P+L++    + V   + G  H+A I + 
Sbjct: 264 VLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPKLLESTVMLDVTNISLGRKHAALITKR 323

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           G V+ +G+ +  K+  +       P ++  L   + + V CG Y TC LT  GELY WG 
Sbjct: 324 GEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGVHVKSVACGEYQTCALTDSGELYAWGE 383

Query: 315 NENGCLGIGSIDVLHS---PERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
           N+ G   +G  +   S   P R+ GP +   +  V+CG  HTA +S  G++ T+G G   
Sbjct: 384 NKYGA-NLGCEERSRSQWLPRRISGPLTGVCILNVACGDWHTAIVSSSGQLFTYGDG--- 439

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
                    S G LGHGN +    P  V   + +    V+CG  HT A+++ +
Sbjct: 440 ---------SFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTAAIVDII 483


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 187/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4229 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4286

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4287 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4345

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L G+     A G   S A+T  G+VL+WG G  GRLGHG     
Sbjct: 4346 GNRVS--YDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGD---- 4399

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4400 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4449

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4450 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4507

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4508 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 4554

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V+  +    ++V+CG  HT AL
Sbjct: 4555 DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 131/291 (45%), Gaps = 16/291 (5%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
            A+  GG H L LT  G VYA G  + G+LG    + Y    L        V  I+ G  H
Sbjct: 4315 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAH 4374

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
            S+AIT  G++  WGK   G+LG G    ++ P    VE L G      A G    Q++ +
Sbjct: 4375 SAAITASGQVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTLCI 4432

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S  
Sbjct: 4433 TDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFSVA 4483

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE+Y
Sbjct: 4484 LTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY 4543

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            TWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4544 TWGDNDEGQLGDGTVTAIQRP-RLVSALQGKHIVKVTCGSAHTLALSTSQL 4593



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 168/349 (48%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G V+A G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3114 GGSKSLFIVSQEGRVFACGEGTNGRLGLGVTYNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3172

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P +VE L     +  A G   S A++ 
Sbjct: 3173 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRQVEALRAKKIRDVACGSSHSAAISS 3230

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3231 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALAGRRVVQVACGSRDAQTLA 3281

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3282 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3341

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3342 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDSGQVYAWG---- 3396

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   ++V   +V+CG +H+ A
Sbjct: 3397 -----DNDH---GQQGSGNTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P    A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3244

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3245 LGHGDN-ATQLKPKLVAALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3303

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3304 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3359

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + ++G+VY +GD   D      GN   
Sbjct: 3360 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDN--DHGQQGSGNTFV 3410

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3411 NKKPALVIGLDDVFVNRVACGSSHS 3435



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4335 WGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKGRYGR 4394

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4395 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4452

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4453 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4509

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4510 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4562

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L+S L   +  +V CG  HT  L++
Sbjct: 4563 RPRLVSALQGKHIVKVTCGSAHTLALST 4590



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 132/315 (41%), Gaps = 40/315 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV+   F+   +K + C     L L++ G ++A  L+               EP  +   
Sbjct: 581 PVLSCRFQ---VKQVVCSENQVLLLSQEGKLHAWRLSK-----------PEAEPQPLEEA 626

Query: 122 KKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
             E   IS   H    H  AI  +   Y WG   + +LG G   A+ +P  TK+  L   
Sbjct: 627 GHETF-ISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP--TKIAALEQH 683

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-E 236
             +    G   S  +T GG +L+WG G   RLGHG          S     P L+  L E
Sbjct: 684 CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGN---------SDDRCLPTLVAALAE 734

Query: 237 GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
              V +A  +G  HS  +   G V+ +GD    K+     N + +P L+  LP  + +  
Sbjct: 735 HTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA 794

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           G  ++  L+S G++YTWG  +  CLG      S+     P  V     +  VD ++ G  
Sbjct: 795 GSQYSVALSSEGQVYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVD-MAVGVA 851

Query: 352 HTAAI-SEGKILTWG 365
           H  A+ S G++  WG
Sbjct: 852 HCLALSSSGEVFGWG 866



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 107/224 (47%), Gaps = 15/224 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+  RLG G   +R  P   +A E+H ++++ CG  ++  +T  G +   G   + +
Sbjct: 655 WGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAVITCGGNLLTWGRGTYAR 714

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L  L  +  +  VV ++  +G  HS A+T +G ++ WG    G+LG G  
Sbjct: 715 LGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC 774

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
              + PI   VE L  +  ++   G + SVA++  G+V +WG      LGH   E S+ G
Sbjct: 775 NGSLQPI--LVESLPRV--QRIFAGSQYSVALSSEGQVYTWGKATC--LGHQLVERSVQG 828

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRL+  L+  ++   A G  H   +  +G V+ +G
Sbjct: 829 C------SVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWG 866



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 34/305 (11%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H + +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVFCGCTYSA 696

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
            IT  G L  WG+ +  +LG G    + +P  T V  L+       ALG     S+A+T 
Sbjct: 697 VITCGGNLLTWGRGTYARLGHGNSDDRCLP--TLVAALAEHTVVDVALGSGDAHSLALTS 754

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L   +V+   AG  +S  + 
Sbjct: 755 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLP--RVQRIFAGSQYSVALS 803

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G+VY +G       +++ +       P L+S L +    ++  G  H   L+S GE++
Sbjct: 804 SEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVF 863

Query: 311 TWGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
            WG N+   +    + S  +L SP  V  P    P   ++C        + G+ L W   
Sbjct: 864 GWGRNDCQQVCPSSVSSEPLLRSPILVALP--TLPASGIAC--------TAGQSLIWTQS 913

Query: 368 GSHGT 372
              G 
Sbjct: 914 SHQGV 918



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 125/283 (44%), Gaps = 31/283 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  G+V + G 
Sbjct: 3076 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFIVSQEGRVFACGE 3133

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3134 GTNGRLGLGVTYNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3184

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+         +P  +  L   +  +V CG  H+  ++S GELYTWG  E G 
Sbjct: 3185 WGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3244

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWGGSHGTFSED 376
            LG G       P+ V    +   V QV+CG +   T A++E G + +WG     G F   
Sbjct: 3245 LGHGDNATQLKPKLVAA-LAGRRVVQVACGSRDAQTLALTEDGAVFSWG----DGDF--- 3296

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3297 -----GKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLAL 3334



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 99/224 (44%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G   +  WG    G+LG  + S I          TP   + L  ++    A G      +
Sbjct: 4222 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4272

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+
Sbjct: 4273 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4332

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
            Y WG  E+G LG G+      P+ V+     S  D ++CG  H+AAI+  G++LTWG G 
Sbjct: 4333 YAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVAD-IACGSAHSAAITASGQVLTWGKG- 4390

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 4391 -----------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4423



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 56/168 (33%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P + +A  +H++   AL  G AH+L LT  G V+A G  D+
Sbjct: 707 WGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDY 766

Query: 101 GQLGISENIGYSLEPLRISGLK-------------------------------------- 122
           G+LG + N   SL+P+ +  L                                       
Sbjct: 767 GKLG-NGNCNGSLQPILVESLPRVQRIFAGSQYSVALSSEGQVYTWGKATCLGHQLVERS 825

Query: 123 ---------------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                          K +V ++ G  H  A++  GE++ WG+N   Q+
Sbjct: 826 VQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQV 873



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 14/105 (13%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG+ E+  LG G       P ++     +  V  V CG  ++A
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVFCGCTYSA 696

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            I+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 697 VITCGGNLLTWG----RGTYA--------RLGHGNSDDRCLPTLV 729


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  126 bits (317), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 28/360 (7%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
                +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYM G NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
           T ++T  G LYT+G   +G LG+G  +  +  +    P F +  V  V+CG  H   +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367



 Score =  118 bits (296), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 39/350 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  L+ E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +     T    L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDR-----TSFH-LVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++   G    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+        NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
             E+Y++G  + G LG G+        RV   F +  V   +CG  HTA I++  +L   
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
             G HG            LG  N  +   PT+     +     V+CG  H
Sbjct: 321 GDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCGGCH 361



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 44/262 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P ++ C           G E +  VT  GK+  +G+   G+LG G ++++         
Sbjct: 37  VPLRISC-----------GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV--------- 76

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-- 284
             P  +K L   +VK+ A G  H+      G +Y  G     ++   + N      L+  
Sbjct: 77  NKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF 136

Query: 285 -SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            +K    + +  G   +  LT  G LY  G N  G +G+G      +P+ V        V
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS---VGKRV 193

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVN 399
             VSCG+ H+A ++ +G + T+G                G+LG   +    H     + +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFG------------EKDSGKLGLSTEKLANHKVPQQVTD 241

Query: 400 FGENVKALQVSCGFNHTGALLE 421
             + V  +QV+CG  HT AL E
Sbjct: 242 IPDRV--VQVACGGGHTVALTE 261


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 181/386 (46%), Gaps = 55/386 (14%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL  
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120

Query: 158 ------GKKAAKVIPIPTKV---EC------LSGIFTKQAALGFEQSVAVTG-----GGK 197
                   + +  +P+   +   EC       S + T  + L  +  +A +G       +
Sbjct: 121 SEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASE 180

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V  WG    G+LG G        +    + +P+LIK L G+     AAG  HS  +  +G
Sbjct: 181 VFCWGQNKYGQLGLG--------IDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG 232

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGS 314
            ++ +G     ++   + N    P L+  L  S+++V   CG  HT  LT  G ++T+G+
Sbjct: 233 AIFGWGRNKFGQLGLNDENDRYVPYLLKSL-RSQKIVYICCGEDHTAALTKEGGVFTFGA 291

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGT 372
              G LG  S     +P +V      S V Q++CG +HT+A   S G+I ++G GG+   
Sbjct: 292 GGYGQLGHNSTSHEINPRKV-FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN--- 347

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIV 398
                    GQLG G+  +   P  V
Sbjct: 348 ---------GQLGTGSTSNRKSPFTV 364



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 165/384 (42%), Gaps = 54/384 (14%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  D G+LG    +SR +P    A +  ++ A++CG AHTL L + G VYA GL+  GQL
Sbjct: 59  GCNDLGQLG--HEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQL 116

Query: 104 GI----------SENIGYSLEP-LRISGLKKEVVQISTGYHHSSAITVD----------- 141
           G+           ++I   ++  +RI   KK   + S      S +  D           
Sbjct: 117 GLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAV 176

Query: 142 --GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
              E++ WG+N  GQLGLG    K    P  ++ L GI   Q A G   S  +T  G + 
Sbjct: 177 SASEVFCWGQNKYGQLGLGIDCKKQTS-PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF 235

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            WG    G+LG   E+           Y P L+K L   K+     G  H+A + + G V
Sbjct: 236 GWGRNKFGQLGLNDEN---------DRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGV 286

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHT-CVLTSGGELYTWGSNE 316
           + FG     ++     +H   P  + +L  S   ++ CG  HT   + S G +Y++G   
Sbjct: 287 FTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 346

Query: 317 NGCLGIGSIDVLHSPERVQG---PFS-ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           NG LG GS     SP  V+G   P++ + P D  S  +     I         + G   +
Sbjct: 347 NGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDLDSEEYFCVKRI---------FSGGDQS 397

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPT 396
           FS   +SS    G  +D  Y  P+
Sbjct: 398 FSH--YSSPQNCGPPDDFRYPDPS 419



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 119/306 (38%), Gaps = 62/306 (20%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G    
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G+LGH +           S   P  +  L+   +   + G  H+  +++ G+VY +G   
Sbjct: 64  GQLGHEK-----------SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDS 112

Query: 264 ------------DRAVDKMLFQEGNH----------ARRPSLISKL-----PYSEEVVCG 296
                        R   K +F   +           A R S +S L     P S     G
Sbjct: 113 DGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESG 172

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTA 354
                V  S  E++ WG N+ G LG+G ID     SP+ ++      P  QV+ G  H+ 
Sbjct: 173 Q----VAVSASEVFCWGQNKYGQLGLG-IDCKKQTSPQLIKSLLG-IPFMQVAAGGAHSF 226

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++  G I  WG             +  GQLG  ++ D   P ++    + K + + CG 
Sbjct: 227 VLTLSGAIFGWG------------RNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGE 274

Query: 414 NHTGAL 419
           +HT AL
Sbjct: 275 DHTAAL 280


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 181/363 (49%), Gaps = 24/363 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+L L   E        + +   +  ++ ++CG  HTL+L E G + + G N +
Sbjct: 4   WGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQNPY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   S+E  +IS L+ + +V IS G +HS A++ +G +Y WG  S GQLG G 
Sbjct: 64  GQLGRKSN-NSSIE--QISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGN 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +++    P K+  L      Q + G   S+A++  G+V SWG    G+LG G  S I+ 
Sbjct: 121 LSSRNF-TPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCGQLGLG--SQII- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                ++ TP+L+K L+G+ +    AG   S  +  +G V+ +G     ++ F+      
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKG 231

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             +P  ++ L       + CG  HT VL+  G +YT+G + +G LG  S +    P++++
Sbjct: 232 TFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIE 291

Query: 336 GPFSESPVDQVSCGWKHTA--AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
               +  V QV+CG  HT     S  +I+++G G      + +  S   +L    D+  +
Sbjct: 292 DYAGQ--VSQVACGRYHTLLYVFSCNRIVSFGKGSLRPQDNTEC-SDEAELPSEFDISSL 348

Query: 394 HPT 396
            PT
Sbjct: 349 VPT 351



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 149/344 (43%), Gaps = 56/344 (16%)

Query: 92  VYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYM 146
           +Y  G N FGQL +     E + +       S   +E VQ +S G  H+  +  DG L  
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQS---QECVQKVSCGEKHTLYLLEDGTLLS 57

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G+N  GQLG     + +     ++  L        + G   SVAV+  G + SWG G  
Sbjct: 58  CGQNPYGQLGRKSNNSSI----EQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSE 113

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G  SS          +TP+ I  L   K+   + G  HS  + E+GRV+ +G   
Sbjct: 114 GQLGTGNLSS--------RNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNK 165

Query: 267 VDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++ L  +  +   P L+  L   P  + V  GG  +  L+  G ++ WG N  G LG 
Sbjct: 166 CGQLGLGSQIINQATPQLVKSLKGIPLVQ-VTAGGSQSFALSMSGTVFAWGKNNAGQLGF 224

Query: 323 GSIDVLHSPERVQGPFSESPVDQ--------VSCGWKHTAAISEGKILTWGWGGSHGTFS 374
            S       + ++G F    V+         +SCG +HTA +S+         GS  TF 
Sbjct: 225 KS-------DPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSK--------DGSVYTFG 269

Query: 375 EDGHSSGGQLGH--GNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           +D H   GQLG   GN    +   I ++   V   QV+CG  HT
Sbjct: 270 DDTH---GQLGQNSGNQTS-VPQKIEDYAGQVS--QVACGRYHT 307



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 33/284 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG N  GQL L +   +V+         S    ++ + G + ++ +   G +LS G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG           R ++  +   I  LE   +   + G  HS  + + G +Y +G
Sbjct: 61  NPYGQLG-----------RKSNNSSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSWG 109

Query: 264 DRAVDKMLFQEGNHARR---PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
           D +  ++    GN + R   P  I+ L  ++  ++ CG +H+  L+  G +++WG N+ G
Sbjct: 110 DGSEGQL--GTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNKCG 167

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
            LG+GS  +  +  ++       P+ QV+ G   + A+S  G +  W            G
Sbjct: 168 QLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAW------------G 215

Query: 378 HSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++ GQLG  +D       P  VN   N+    +SCG  HT  L
Sbjct: 216 KNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVL 259



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 76/169 (44%), Gaps = 21/169 (12%)

Query: 259 VYIFGDRAVDKMLFQEGN----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
           +Y +GD    ++   +G     H +           ++V CG  HT  L   G L + G 
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCGQ 60

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF 373
           N  G LG  S +   S E++    +++ VD +SCG  H+ A+S EG I +WG G      
Sbjct: 61  NPYGQLGRKSNN--SSIEQISSLEAQTIVD-ISCGTNHSVAVSDEGSIYSWGDG------ 111

Query: 374 SEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 S GQLG GN       P  +    N K +Q+SCG  H+ AL E
Sbjct: 112 ------SEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE 154


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/304 (31%), Positives = 154/304 (50%), Gaps = 20/304 (6%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           A G  H L L     V+A G N  GQLG      G   EP++ + +   V  +S G  HS
Sbjct: 35  ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQ-ALVNLPVDLVSCGKEHS 93

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S+GQLG GK   ++  IP K++ L+GI   Q + G+  S+A++  
Sbjct: 94  LAVCHKGKVFAWGVGSDGQLGTGK-FEEICFIPQKIKALTGIKIIQISCGYYHSLALSKD 152

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG GQE          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 153 GQVFSWGKNSHGQLGLGQEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 204

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
           +G  + +G+ +  ++ F   N    + +P  +  L       + CG  HT VLT   +++
Sbjct: 205 SGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVF 264

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWGG 368
           T+G N  G LG   +     P+ V+G     PV Q+ CG  HT A   + G+++++G   
Sbjct: 265 TFGDNSFGQLGHNGVSQTTGPQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQVVSFGREP 322

Query: 369 SHGT 372
           SH +
Sbjct: 323 SHTS 326



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 12/274 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG     S  +P    A     +  ++CG  H+L +   G V+A G+   GQL
Sbjct: 54  GDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSLAVCHKGKVFAWGVGSDGQL 113

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +       P +I  L   +++QIS GY+HS A++ DG+++ WGKNS+GQLGLG++  
Sbjct: 114 GTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFP 173

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG   +G+L     + ++    
Sbjct: 174 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGNNVLV---- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR +  L+ + V   + G+ H+A + +N +V+ FGD +  ++     +    P 
Sbjct: 229 --QSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTGPQ 286

Query: 283 LISKL--PYSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +  P S ++ CG YHT   + + G++ ++G
Sbjct: 287 LVEGIGGPVS-QIDCGSYHTLAYVYTTGQVVSFG 319



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 142/302 (47%), Gaps = 33/302 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G  H+  +  +  ++  G NS GQ  LG++ A     P  ++ L  +     + 
Sbjct: 31  LLQAASGERHALLLLTNQVVHACGDNSGGQ--LGRRGAPSGKQPEPIQALVNLPVDLVSC 88

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   GKV +WG G  G+LG G+   I         + P+ IK L G+K+   +
Sbjct: 89  GKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEIC--------FIPQKIKALTGIKIIQIS 140

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
            G+ HS  + ++G+V+ +G  +  ++ L QE      P  +  L   P + +V  GG H+
Sbjct: 141 CGYYHSLALSKDGQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLA-QVAAGGAHS 199

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             L+  G  + WG+N  G L     +VL   + P  V G      V  +SCG++HTA ++
Sbjct: 200 FALSLSGTSFGWGNNSAGQLAFSGNNVLVQSYKPRSV-GALKNLGVVYISCGYEHTAVLT 258

Query: 358 EG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           +  ++ T+            G +S GQLGH        P +V  G      Q+ CG  HT
Sbjct: 259 QNDQVFTF------------GDNSFGQLGHNGVSQTTGPQLVE-GIGGPVSQIDCGSYHT 305

Query: 417 GA 418
            A
Sbjct: 306 LA 307



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 21/243 (8%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG G  E   + P    A     +  ++CG  H+L L++ G V++ G N  G
Sbjct: 105 WGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHSLALSKDGQVFSWGKNSHG 164

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQL     
Sbjct: 165 QLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGNNSAGQLAFSGN 224

Query: 161 AAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              V    P  V  L  +     + G+E +  +T   +V ++G    G+LGH   S   G
Sbjct: 225 NVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQNDQVFTFGDNSFGQLGHNGVSQTTG 284

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+L++ + G   +I    +   A +   G+V  FG         +E +H  
Sbjct: 285 ---------PQLVEGIGGPVSQIDCGSYHTLAYVYTTGQVVSFG---------REPSHTS 326

Query: 280 RPS 282
            P+
Sbjct: 327 NPT 329


>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1081

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 169/378 (44%), Gaps = 44/378 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG G+  +   PV   A        LA G  H L ++  G V++ G N  GQ
Sbjct: 726  WGDNSLGQLGNGATSAS--PVPVQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ 783

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG  E       P  ++G  + +  ++ G   S A++ DG ++ WG N +GQLG G   A
Sbjct: 784  LGY-EGSATQTSPRWLTG-PECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTA 841

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P   +V  L+ +    A  G + ++AV   G V +WGA GSG+LG G          
Sbjct: 842  RTAP--ARVPGLAHVVAIAA--GSDHALAVRADGTVWAWGANGSGQLGDGT--------- 888

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +TS   P  +KEL  V V   A G  HS  +  +G V+ +G     ++          P 
Sbjct: 889  TTSRAVPMQVKEL--VDVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTSRTLPV 946

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +S L   + +  G  H+  L  GG ++ WG+N +G LG G+      P +V G    S 
Sbjct: 947  FVSTLSGVQAIASGAQHSLALAEGGVVWAWGANGSGQLGDGTTTSRTRPVQVSG---LSG 1003

Query: 343  VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH----PTIV 398
            V  +  G   + A++ GK+ +W            G++S GQLG G           PT+ 
Sbjct: 1004 VQGLVAGASFSLALTPGKVWSW------------GNNSAGQLGDGTLNSRSQPGAGPTLS 1051

Query: 399  NFGENVKALQVSCGFNHT 416
            +F      + +S G  HT
Sbjct: 1052 SF------VALSAGAQHT 1063



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 172/375 (45%), Gaps = 37/375 (9%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G+     R P V        +  +A G  H+L L  +G V+A G N +G
Sbjct: 524 WGDNSYGQLGAGATPRGPRAPAVVPGLAV--ITHVAAGLFHSLALDSSGQVWAWGDNVYG 581

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P R+SGL   +  I  G  +S A+  DG ++ WG+NSNGQLG G   
Sbjct: 582 QLGDGSTTSRNV-PGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTTT 640

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A+  P+P +V  L       +  G   +VA+   G + +WG   SG+LG+G         
Sbjct: 641 AR--PVPARV-SLPATLVALSTRG-SHTVALDTTGMLWAWGRNVSGQLGNGTL------- 689

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              SE TPR +      +V+  A+G   +  +  +G V+ +GD ++ ++     + +  P
Sbjct: 690 --VSESTPRRVPSF--ARVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSASPVP 745

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                 P +  +  G  H   ++S G ++++GSN  G LG        SP  + GP    
Sbjct: 746 VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPEC-- 803

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            ++ V+ G   + A+S +G +  WG  GS            GQLG G       P  V  
Sbjct: 804 -IEAVAAGALFSLALSCDGGVWAWGDNGS------------GQLGDGAVTARTAPARVPG 850

Query: 401 GENVKALQVSCGFNH 415
             +V A  ++ G +H
Sbjct: 851 LAHVVA--IAAGSDH 863



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 169/371 (45%), Gaps = 62/371 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET---GCVYATGLND 99
           WG    G+LG G+L+SR  PV  S      + ALA GG+H++  + T   G V+A G N 
Sbjct: 220 WGGNYSGQLGDGTLDSRSTPVRVSGLTG--IVALAGGGSHSVAASSTTLGGKVWAWGDNT 277

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +GQLG   ++  SL PL + GL  +VV +++G  HS A+  D  ++ WG N+  Q     
Sbjct: 278 YGQLGNGGDV-SSLLPLEVPGLT-QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTG 335

Query: 160 KAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--S 216
            + + +P+      +SG+   QA A G   S+   G    L WGA GSG+LG+G  S  +
Sbjct: 336 TSVQRVPV-----RVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRA 390

Query: 217 ILG------------------FLRST---------------------SEYTP-RLIKELE 236
           + G                  FLR                       S   P RL   L 
Sbjct: 391 LPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLT 450

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            V+   A++   HS  +  +G V+ +GD A  ++    G     P+ +  +  + E+  G
Sbjct: 451 SVRALSASS--YHSLALRSDGTVWAWGDNAYGQLGDTSGGRRPSPAQVPGVAGATEIAAG 508

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 355
            YH+  L S G ++TWG N  G LG G+      +P  V G    + +  V+ G  H+ A
Sbjct: 509 TYHSLALRSDGTVWTWGDNSYGQLGAGATPRGPRAPAVVPG---LAVITHVAAGLFHSLA 565

Query: 356 I-SEGKILTWG 365
           + S G++  WG
Sbjct: 566 LDSSGQVWAWG 576



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 173/380 (45%), Gaps = 37/380 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV        +L AL+  G+HT+ L  TG ++A G N  GQ
Sbjct: 626 WGENSNGQLGDGTTTAR--PVPARVSLPATLVALSTRGSHTVALDTTGMLWAWGRNVSGQ 683

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  P R+    + V   ++G   + A+  DG ++ WG NS GQLG G  +A
Sbjct: 684 LGNGTLVSES-TPRRVPSFAR-VQGFASGLRTTFALRADGTVWAWGDNSLGQLGNGATSA 741

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P    V+ +    T   A G +  +AV+  G V S+G+   G+         LG+  
Sbjct: 742 SPVP----VQAVGYPRTVPLASGAQHVLAVSSDGSVFSFGSNSRGQ---------LGYEG 788

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S ++ +PR +   E   ++  AAG L S  +  +G V+ +GD    ++          P+
Sbjct: 789 SATQTSPRWLTGPE--CIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAPA 846

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L +   +  G  H   + + G ++ WG+N +G LG G+      P +V+       
Sbjct: 847 RVPGLAHVVAIAAGSDHALAVRADGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVD--- 903

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  V+ G  H+ A+ ++G +  WG  GS            GQLG G       P  V+  
Sbjct: 904 VVAVAGGSGHSLAVRADGTVWAWGANGS------------GQLGDGTTTSRTLPVFVSTL 951

Query: 402 ENVKALQVSCGFNHTGALLE 421
             V+A  ++ G  H+ AL E
Sbjct: 952 SGVQA--IASGAQHSLALAE 969



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 132/272 (48%), Gaps = 20/272 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG G++ +R  P          + A+A G  H L +   G V+A G N  GQ
Sbjct: 826  WGDNGSGQLGDGAVTARTAPARVPGLAH--VVAIAAGSDHALAVRADGTVWAWGANGSGQ 883

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       ++ P+++  L  +VV ++ G  HS A+  DG ++ WG N +GQLG G   +
Sbjct: 884  LGDGTTTSRAV-PMQVKELV-DVVAVAGGSGHSLAVRADGTVWAWGANGSGQLGDGTTTS 941

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + +P+   V  LSG+  +  A G + S+A+  GG V +WGA GSG+LG G          
Sbjct: 942  RTLPV--FVSTLSGV--QAIASGAQHSLALAEGGVVWAWGANGSGQLGDGT--------- 988

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            +TS   P  +  L GV+  +A A F   +     G+V+ +G+ +  ++     N   +P 
Sbjct: 989  TTSRTRPVQVSGLSGVQGLVAGASF---SLALTPGKVWSWGNNSAGQLGDGTLNSRSQPG 1045

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
                L     +  G  HT VL S     +WG+
Sbjct: 1046 AGPTLSSFVALSAGAQHTVVLRSDDSFLSWGT 1077



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 169/375 (45%), Gaps = 43/375 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G  +   R V         + A+A G  H+L L   G V+A G N  GQ
Sbjct: 122 WGTNTDGQLGDGVSQ---RSVPAQVAGLTGVTAIAAGNLHSLALIN-GAVWAWGNNTTGQ 177

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +   S  P +++GL  EVV I+ G  HS A+  DG ++ WG N +GQLG G   +
Sbjct: 178 LGDGSSTSRS-TPAKVAGLT-EVVAIAAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDS 235

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILG 219
           +  P+  +V  L+GI     A G   SVA +    GGKV +WG    G+LG+G + S L 
Sbjct: 236 RSTPV--RVSGLTGIVAL--AGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSL- 290

Query: 220 FLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                      L  E+ G+   +A A+G  HS  +  +  V+ +GD A      Q G   
Sbjct: 291 -----------LPLEVPGLTQVVALASGTSHSLALRGDDSVWAWGDNA-QAQTAQTGTSV 338

Query: 279 RR-PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +R P  +S +  ++ + CG   + V         WG+N +G LG GS  V   P RV   
Sbjct: 339 QRVPVRVSGVSDAQALACGNAFSLVGRGDNVTLGWGANGSGQLGNGSSSVRALPGRVP-- 396

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT- 396
            S +    ++ G  H   + +     W W          G ++ GQLG G  V    P  
Sbjct: 397 -SLTAGASLAAG-DHHVFLRQADGSVWAW----------GDNTYGQLGDGTLVSRPAPVR 444

Query: 397 IVNFGENVKALQVSC 411
           + +   +V+AL  S 
Sbjct: 445 LSSTLTSVRALSASS 459



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 138/299 (46%), Gaps = 34/299 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA G  H+L++T  G V+A G N  GQLG    + +S  P ++ GL   V  ++ G  HS
Sbjct: 53  LAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHS-TPTQVVGLTG-VTAVAAGNTHS 110

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  +G ++ WG N++GQLG G     V   P +V  L+G+     A G   S+A+   
Sbjct: 111 MALREEGTVWTWGTNTDGQLGDGVSQRSV---PAQVAGLTGV--TAIAAGNLHSLALI-N 164

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG   +G+LG G          STS  TP  +  L   +V   AAG  HS  +  
Sbjct: 165 GAVWAWGNNTTGQLGDGS---------STSRSTPAKVAGL--TEVVAIAAGDFHSLALKR 213

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS---GGELYTW 312
           +G V+ +G     ++     +    P  +S L     +  GG H+   +S   GG+++ W
Sbjct: 214 DGTVWAWGGNYSGQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAW 273

Query: 313 GSNENGCLG----IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
           G N  G LG    + S+  L  P   Q       V  ++ G  H+ A+  G    W WG
Sbjct: 274 GDNTYGQLGNGGDVSSLLPLEVPGLTQ-------VVALASGTSHSLAL-RGDDSVWAWG 324



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 134/297 (45%), Gaps = 38/297 (12%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +++ G +HS  +T  G ++ WG N+ GQLG G         PT+V  L+G+     A G 
Sbjct: 52  RLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQH--STPTQVVGLTGV--TAVAAGN 107

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WG    G+LG G           +    P  +  L GV     AAG
Sbjct: 108 THSMALREEGTVWTWGTNTDGQLGDGV----------SQRSVPAQVAGLTGVTA--IAAG 155

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            LHS  +  NG V+ +G+    ++          P+ ++ L     +  G +H+  L   
Sbjct: 156 NLHSLAL-INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTEVVAIAAGDFHSLALKRD 214

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE----GKIL 362
           G ++ WG N +G LG G++D   +P RV G    + +  ++ G  H+ A S     GK+ 
Sbjct: 215 GTVWAWGGNYSGQLGDGTLDSRSTPVRVSG---LTGIVALAGGGSHSVAASSTTLGGKVW 271

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            W            G ++ GQLG+G DV  + P  V     V AL  + G +H+ AL
Sbjct: 272 AW------------GDNTYGQLGNGGDVSSLLPLEVPGLTQVVAL--ASGTSHSLAL 314



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           RR   IS       +  G  H+  +T  G ++ WG+N  G LG GS     +P +V G  
Sbjct: 39  RRAPAISVQGRPYRLAAGLNHSLYVTPAGTVWAWGANAQGQLGEGSTLQHSTPTQVVG-- 96

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
             + V  V+ G  H+ A+  EG + TWG
Sbjct: 97  -LTGVTAVAAGNTHSMALREEGTVWTWG 123


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 169/364 (46%), Gaps = 32/364 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +   ++ +ACG  +T+ +T+ G +Y+ G ND+
Sbjct: 31  WGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIYSCGNNDY 90

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  + + G +H+ AI   G+L+ WG N+ GQLGL  
Sbjct: 91  GQLG-HEKGRKRLQ--LIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNS 147

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K   +   P  V+ L      Q A G + + A+T  G++ SWG+   G+LG G +     
Sbjct: 148 KNF-MESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK--- 203

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 E  P+ I    G+ +   A G  HS  I ++G V+ +G     ++   +     
Sbjct: 204 -----YEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRN 258

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG GS      P +V   
Sbjct: 259 LPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVM-E 317

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S V Q+SCG +HT A+  S G++  WG GG+            GQLG+ +      P
Sbjct: 318 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA------------GQLGNHSTRSVTTP 365

Query: 396 TIVN 399
            +V+
Sbjct: 366 QVVH 369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 136/299 (45%), Gaps = 18/299 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    + R R  +    +    K  ACG  HTL + E G +++ G N  GQL
Sbjct: 86  GNNDYGQLG--HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWGSNTEGQL 143

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L    VVQI+ G  H+ A+T +GELY WG NS GQLGLG    
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIK 203

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P  +    GI     A G   S+A++  G V  WG    G+LG          L 
Sbjct: 204 YEIK-PKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLG----------LN 252

Query: 223 STSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            T +   P  ++ L+  K+  AA G   S  +  +G V+  G     ++     ++   P
Sbjct: 253 DTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILP 312

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L  S   ++ CG  HT  L  S G +Y WG    G LG  S   + +P+ V GP
Sbjct: 313 RQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 169/368 (45%), Gaps = 51/368 (13%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            PV+   +  H  K + C G+     T  G +   G+ D       ENI   L P  +  
Sbjct: 13  EPVIAVEYPLHKKKDMFCWGS-----TIHGELGLGGIED-------ENI---LIPRELDF 57

Query: 121 LKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG--LGKKAAKVIPIPTKVECLSGI 177
            K  E+ QI+ G +++  IT  GE+Y  G N  GQLG   G+K  ++IP       L   
Sbjct: 58  KKAAEIQQIACGENYTVVITQIGEIYSCGNNDYGQLGHEKGRKRLQLIP------GLDAF 111

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K+AA G   ++A+   G++ SWG+   G+LG   ++ +        E +PR++K L  
Sbjct: 112 VFKKAACGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFM--------ESSPRMVKTLGT 163

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK---LPYSEEV 293
             V   A G  H+  +  NG +Y +G  +  ++ L  +  +  +P  IS    +P +  +
Sbjct: 164 SVVVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAF-I 222

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CGGYH+  ++  G ++ WG N  G LG+      + P ++Q     + +   +CG + +
Sbjct: 223 ACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQT-LQNAKICYAACGEEFS 281

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             ++ +G + T G G              GQLGHG++ + I P  V         Q+SCG
Sbjct: 282 VFLTVDGGVFTCGAGMY------------GQLGHGSNSNEILPRQVMELMGSTVTQISCG 329

Query: 413 FNHTGALL 420
             HT AL+
Sbjct: 330 KRHTLALV 337


>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 806

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 169/369 (45%), Gaps = 41/369 (11%)

Query: 36  QRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           Q   A  WG+  YG+LG G+   R+ P            AL+    HTL L + G V+  
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLTGATALSATAYHTLALAQDGTVWGW 517

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G ND GQLG + ++   + P  + GL   V  +++G +HS A+  DG ++ WG N+ GQL
Sbjct: 518 GYNDSGQLGDTVDM-VRVTPAPLPGLTG-VTALASGTYHSLALKQDGTVWAWGLNNLGQL 575

Query: 156 GLGKKAAKV--IPIP--TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           G G   ++   +P+P  T V  L        A     S+A+   G V +WG   SG+LG 
Sbjct: 576 GDGTTVSRTEQMPVPGLTDVTAL--------AASTYHSLALKQDGTVWTWGYNSSGQLGD 627

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G  +S L         TP  +  L GV     AAG +HS  + ++G V+ +G     ++ 
Sbjct: 628 GTTASRL---------TPAQVPGLTGVSA--IAAGLVHSLALKQDGTVWAWGRNTDGQLG 676

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                ++  P  +  L     +  G YH+  L   G  ++WG N  G LG  +I    +P
Sbjct: 677 NGAAVNSPVPVQVQGLTGVSAIAAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTP 736

Query: 332 ERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            +VQG    + V  ++ G  H+ A + +G + TW            G+++ G+LG G  +
Sbjct: 737 VQVQG---LTAVTALAGGDAHSMALLRDGTVWTW------------GYNAEGELGDGTTL 781

Query: 391 DYIHPTIVN 399
           D   P  V 
Sbjct: 782 DRTAPVRVQ 790



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 139/294 (47%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG      R  P          + ALA G  H+L L + G V+A GLN+ GQ
Sbjct: 517 WGYNDSGQLGDTVDMVRVTPAPLPGLT--GVTALASGTYHSLALKQDGTVWAWGLNNLGQ 574

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  + E + + GL  +V  ++   +HS A+  DG ++ WG NS+GQLG G  A+
Sbjct: 575 LGDGTTVSRT-EQMPVPGLT-DVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTAS 632

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P   +V  L+G+     A G   S+A+   G V +WG    G+LG+G          
Sbjct: 633 RLTPA--QVPGLTGV--SAIAAGLVHSLALKQDGTVWAWGRNTDGQLGNGA--------- 679

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++ L GV     AAG  HS  + ++G  + +G     ++  +    +  P 
Sbjct: 680 AVNSPVPVQVQGLTGVSAI--AAGSYHSLALKQDGTAWSWGRNGTGQLGNETITGSLTPV 737

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +  L     +  G  H+  L   G ++TWG N  G LG G+     +P RVQG
Sbjct: 738 QVQGLTAVTALAGGDAHSMALLRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQG 791



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 142/322 (44%), Gaps = 38/322 (11%)

Query: 103 LGISENIGYSLE---PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+S +    LE   P   S   + V  I+ G  HS  +  DG    WG N  GQLG G 
Sbjct: 420 LGLSASASMILEGGTPCAPS--PRRVTWIAAGGAHSLVVRQDGTADAWGHNGYGQLGDGT 477

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + +P P +V+ L+G  T  +A  +  ++A+   G V  WG   SG+LG       + 
Sbjct: 478 SVDRFLPGPVQVQGLTGA-TALSATAY-HTLALAQDGTVWGWGYNDSGQLGD-----TVD 530

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +R     TP  +  L GV     A+G  HS  + ++G V+ +G   + ++   +G    
Sbjct: 531 MVR----VTPAPLPGLTGVTAL--ASGTYHSLALKQDGTVWAWGLNNLGQL--GDGTTVS 582

Query: 280 RPS--LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R     +  L     +    YH+  L   G ++TWG N +G LG G+     +P +V G 
Sbjct: 583 RTEQMPVPGLTDVTALAASTYHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPG- 641

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
              + V  ++ G  H+ A+ +   + W W          G ++ GQLG+G  V+   P  
Sbjct: 642 --LTGVSAIAAGLVHSLALKQDGTV-WAW----------GRNTDGQLGNGAAVNSPVPVQ 688

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V     V A  ++ G  H+ AL
Sbjct: 689 VQGLTGVSA--IAAGSYHSLAL 708


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 184/409 (44%), Gaps = 59/409 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    V  A E +S++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P R+  L   ++ Q + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             +G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DEMGRPVRRDIVIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++    + P  ++ LE   V I A G  H+  ++E+GR+  +G+    ++   +
Sbjct: 177 PWPPGDIKQI--FVPVRVQGLE--NVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMV 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V    +E  + QVSCG  H+ A++ +G+I ++G  G H           G+LG+G  
Sbjct: 293 PQKVN-LLAEEDIIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------GRLGYGRK 339

Query: 390 VD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 422
           V           I P   +F    +       A  ++CG  HT A++E+
Sbjct: 340 VTTGQPLELPIMIPPPEGSFNHADEEEEGKWSAKWIACGGRHTLAIVEW 388



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 137/338 (40%), Gaps = 37/338 (10%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + A G  + GQLGI  N       +  +LEP  +         + +G  +S AI  DG +
Sbjct: 7   IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVR-------SVVSGSRNSLAICDDGTM 59

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG N  G LG   +  K   IP++V+ L+ +   QAA+G    +AV   G+  +WG  
Sbjct: 60  FTWGWNQRGTLGHPPET-KTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+ G       +G         P+  +    + V+  AAG  HS  +   G V+ +G 
Sbjct: 119 EYGQCGEEPLKDEMGRPVRRDIVIPK--RCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQ 176

Query: 265 RAVD---KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                  K +F        P  +  L     +  G +H   L   G L  WG+NE G LG
Sbjct: 177 PWPPGDIKQIFV-------PVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLG 229

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
            G       P  V G    + VD  + GW  TA   +G++  WG  G HG          
Sbjct: 230 TGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRLG------- 281

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G  +    + P  VN       +QVSCG  H+ AL
Sbjct: 282 --FGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVAL 317


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4219 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4276

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4277 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4335

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4336 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4389

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4390 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4439

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS++
Sbjct: 4440 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVE 4497

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4498 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVFTW------------GDNDEGQLG 4544

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4545 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3101 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3159

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G ++   +  P  VE L     +  A G   S A++ 
Sbjct: 3160 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3217

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3218 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVAALSGRRVIQVACGSRDAQTLA 3268

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3269 LTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3328

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3329 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGHRVIHVAVGALHCLAVTDAGQVYAWG---- 3383

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3384 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4305 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4362

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4363 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4420

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4421 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4471

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++      H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4472 VALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4531

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            ++TWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4532 VFTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4583



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3232 LGHGDN-ATQLKPKLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3290

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3291 SEGSS--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3346

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3347 -------RKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3397

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L       V CG  H+
Sbjct: 3398 NKKPALVIGLDAVIVNRVACGSSHS 3422



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4325 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4384

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4385 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4442

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4443 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHV-- 4499

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G V+ +GD    ++        +
Sbjct: 4500 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQ 4552

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4553 RPRLVAALQGKHIVKVTCGSAHTLALST 4580



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 132/311 (42%), Gaps = 44/311 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVY----ATGLNDFGQLGISENIGYSLEPLRISGLKKEV 125
           K  L+ +AC     L L++ G +Y    A    +  QL  +E    +             
Sbjct: 599 KFQLQQVACSEDVVLLLSKEGKLYNWHIAKPEAEPQQLDFAEIANETF------------ 646

Query: 126 VQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
             IS   H    H  A+  +   Y WG   + +LG G   A+   +PTK+E L  +  K 
Sbjct: 647 --ISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVRL-VKS 701

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A+T GG + +WG G  GRLGHG          S  +  P ++  L+  +V 
Sbjct: 702 VYCGCSYSAAITLGGNLYTWGRGTYGRLGHGT---------SDDQCLPAMVMALKDHQVV 752

Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
             A  +G  H+ C+   G V+ +GD    K+     N +  P LI  LP  + V  G   
Sbjct: 753 DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQRVFAGAQF 812

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           +  L+  G+LY+WG  +  CLG   ++        P  + G   +  VD V+ G  H  A
Sbjct: 813 SLALSCEGQLYSWG--KASCLGHQLVERNVQGCSVPRLITGLQHKRIVD-VAVGVAHCLA 869

Query: 356 I-SEGKILTWG 365
           + S G+I  WG
Sbjct: 870 LSSSGEIFGWG 880



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G+ D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRLVKSVYCGCSYSAA 711

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    +   +P  V  L        ALG     ++ +T  
Sbjct: 712 ITLGGNLYTWGRGTYGRLGHGTSDDQC--LPAMVMALKDHQVVDVALGSGDAHTLCLTSE 769

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+G  +S L          P+LI  L  V+   A A F  S  +  
Sbjct: 770 GLVFAWGDGDYGKLGNGSCNSSL---------LPQLIDCLPRVQRVFAGAQF--SLALSC 818

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +    +V  G  H   L+S GE++ 
Sbjct: 819 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFG 878

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P +V  P
Sbjct: 879 WGRNDNQQICPASVCSEPLLRQPIQVTLP 907



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 86/169 (50%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A + H +   AL  G AHTL LT  G V+A G  D+
Sbjct: 721 WGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDY 780

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL P  I  L + V ++  G   S A++ +G+LY WGK S     L ++
Sbjct: 781 GKLG-NGSCNSSLLPQLIDCLPR-VQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVER 838

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 839 NVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQI 887



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT    +S +     A G +    V+  GKV + G 
Sbjct: 3063 VMVWGLNDKEQLG-GLKGSKV-KVPTFSPTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3120

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3121 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3171

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+     +   +P L+  L   +  ++ CG  H+  ++S GELYTWG  E G 
Sbjct: 3172 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3231

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWGGSHGTFSED 376
            LG G       P+ V    S   V QV+CG +   T A++E G + +WG     G F   
Sbjct: 3232 LGHGDNATQLKPKLVAA-LSGRRVIQVACGSRDAQTLALTEDGAVFSWG----DGDF--- 3283

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3284 -----GKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLAL 3321



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 109/224 (48%), Gaps = 16/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   +R  P    +  +  +K++ CG +++  +T  G +Y  G   +G+
Sbjct: 670 WGVGDSRRLGHGDCHARELPTKIESLVR-LVKSVYCGCSYSAAITLGGNLYTWGRGTYGR 728

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    L  + ++    +VV ++  +G  H+  +T +G ++ WG    G+LG G  
Sbjct: 729 LGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSC 788

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
            + ++P    ++CL  +  ++   G + S+A++  G++ SWG      LGH   E ++ G
Sbjct: 789 NSSLLP--QLIDCLPRV--QRVFAGAQFSLALSCEGQLYSWGKASC--LGHQLVERNVQG 842

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRLI  L+  ++   A G  H   +  +G ++ +G
Sbjct: 843 C------SVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G   +  WG    G+LG  + S I          TP   + L  ++    A G      +
Sbjct: 4212 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4262

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+
Sbjct: 4263 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEV 4322

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
            Y WG  E+G LG G+      P+ V+     S  D ++CG  H+AAI+  G +LTWG G 
Sbjct: 4323 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG- 4380

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 4381 -----------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4413



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG  ++  LG G       P +++       V  V CG  ++A
Sbjct: 653 CEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL--VKSVYCGCSYSA 710

Query: 355 AISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AI+ G  + TWG     GT+        G+LGHG   D   P +V   ++ + + V+ G
Sbjct: 711 AITLGGNLYTWG----RGTY--------GRLGHGTSDDQCLPAMVMALKDHQVVDVALG 757


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/320 (33%), Positives = 159/320 (49%), Gaps = 24/320 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   +   P     F+K  +K ++       H+L LT TG VY+ G  D+
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDY 511

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   +    +  L    L  +VV+ +S GY HS+A+T DGELY WG    G+LG   
Sbjct: 512 GKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDY 571

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSIL 218
            ++K    PTKV+ +  +     A G   ++AV+  GK + S+G G +G+LGHG      
Sbjct: 572 TSSK--NFPTKVQSIESV--GLVACGGSHTLAVSQDGKTIWSFGGGENGKLGHGD----- 622

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +  +  P++I+ L G+ ++  A G   S  +  +G++Y +G  A+      E   A
Sbjct: 623 ----TNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAEYT-A 677

Query: 279 RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 335
            RP L+  L      ++ CG  H   LT   E+Y WG+N  G  G G +   +  P+RV 
Sbjct: 678 LRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRPKRVI 737

Query: 336 GPFSESPVDQVSCGWKHTAA 355
           G      V QVS G  H+ A
Sbjct: 738 G-LDGVSVHQVSAGTSHSVA 756



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%), Gaps = 32/309 (10%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           + S +  +  Q+  G   +  I  DG +   GK S G+LGLG      +P   K      
Sbjct: 422 KYSAVFTDCQQVEAGQFCTFLIYSDGTVGACGKGSYGRLGLGDSNNCSVP---KKPLFDK 478

Query: 177 IFTKQ--AALGFE-QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
            + K+  ++ G +  S+A+T  G+V SWG G  G+LGHG  S         ++  P+L+K
Sbjct: 479 KYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHS---------TQKIPKLVK 529

Query: 234 -ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
             L G  VK  +AG+ HSA + E+G +Y +GD    ++     +    P+ +  +     
Sbjct: 530 GPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIESVGL 589

Query: 293 VVCGGYHTCVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           V CGG HT  ++  G+ ++++G  ENG LG G  +    P+ ++   +   + +V+CG +
Sbjct: 590 VACGGSHTLAVSQDGKTIWSFGGGENGKLGHGDTNRQLKPKVIEA-LNGLYIRKVACGSQ 648

Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
            + A+ S G++  WG G   G  S              +   + P +V   ++ + + ++
Sbjct: 649 SSLAVTSSGQLYAWGCGAILGCGSA-------------EYTALRPRLVEDLQSKRMVDIA 695

Query: 411 CGFNHTGAL 419
           CG +H  AL
Sbjct: 696 CGDSHVIAL 704



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 30/234 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P +V        +K ++ G  H+  +TE G +Y  G  +FG
Sbjct: 506 WGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFG 565

Query: 102 QLG----ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLG 156
           +LG     S+N    ++ +   GL      ++ G  H+ A++ DG+ ++ +G   NG+LG
Sbjct: 566 RLGHDYTSSKNFPTKVQSIESVGL------VACGGSHTLAVSQDGKTIWSFGGGENGKLG 619

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G    ++   P  +E L+G++ ++ A G + S+AVT  G++ +WG G           +
Sbjct: 620 HGDTNRQL--KPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCG-----------A 666

Query: 217 ILGFLRSTSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           ILG    ++EYT   PRL+++L+  ++   A G  H   +     VY +G+ A+
Sbjct: 667 ILGC--GSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAM 718



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 118/276 (42%), Gaps = 31/276 (11%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT--KQAALGFEQSVAVTGGGKVL 199
           GE+Y+WG N   QL  G +     P        S +FT  +Q   G   +  +   G V 
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPK------YSAVFTDCQQVEAGQFCTFLIYSDGTVG 450

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           + G G  GRLG G  ++    +     +  + +K++   K    + G  HS  +   G V
Sbjct: 451 ACGKGSYGRLGLGDSNNC--SVPKKPLFDKKYVKKISSSK---GSDG--HSLALTTTGEV 503

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNE 316
           Y +GD    K+     +  + P L+      + V C   GY H+  +T  GELYTWG  E
Sbjct: 504 YSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGE 563

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
            G LG       + P +VQ   S   V  V+CG  HT A+S+     W +GG        
Sbjct: 564 FGRLGHDYTSSKNFPTKVQ---SIESVGLVACGGSHTLAVSQDGKTIWSFGGGE------ 614

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                G+LGHG+    + P ++     +   +V+CG
Sbjct: 615 ----NGKLGHGDTNRQLKPKVIEALNGLYIRKVACG 646



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G G+ G+LG G    + +P V  A     ++ +ACG   +L +T +G +YA G      
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILG 669

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G +E    +L P  +  L+ K +V I+ G  H  A+T + E+Y WG N+ GQ G G  A
Sbjct: 670 CGSAEYT--ALRPRLVEDLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQG-HA 726

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
              I  P +V  L G+   Q + G   SVA T 
Sbjct: 727 QSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTA 759


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 168/370 (45%), Gaps = 44/370 (11%)

Query: 43  WGNGDYGRLGLGSLESR---------WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           WGN  +G+LGLG +E           W+P         ++  +ACG  HTLFLT +G VY
Sbjct: 6   WGNASHGQLGLGGIEDEQILTPSQIPWKP-------DSAVNQVACGHRHTLFLTASGKVY 58

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSN 152
           A G ND+ QLG       +  PL+I  L+  V+ QI+ G  HS A+T  G++  WG N  
Sbjct: 59  ACGSNDYSQLGHELP---TKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNEC 115

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG       VI +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG  
Sbjct: 116 GQLGHASD-QDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVK 174

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
             S +     S   Y  RL   L G+     A G  H+  I ++  V+ +G     ++  
Sbjct: 175 SPSEL-----SQCNYPMRLTT-LLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGL 228

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  +   P+ +  L       V CG   +  LT+ G ++T G+   G LG G       
Sbjct: 229 NDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEML 288

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           P R+      S + QV+CG +HT A+  S G+I  +G G            S GQLG  N
Sbjct: 289 P-RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLG------------SSGQLGTRN 335

Query: 389 DVDYIHPTIV 398
                 P +V
Sbjct: 336 TKSLNLPQVV 345



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP+     E + +  +ACG  H++ LTE G V + G N+ GQL
Sbjct: 61  GSNDYSQLG-HELPTK-RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   + 
Sbjct: 119 GHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSE 178

Query: 163 -KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   +  ++    V  WG    G+LG   E       
Sbjct: 179 LSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDE------- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 232 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 289

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  +   L+ P+ V GP
Sbjct: 290 RMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVVIGP 348



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 125/280 (44%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++         Q A G   ++ +T  GKV + G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P  I ELE   +   A G  HS  + E G+V  +
Sbjct: 62  SNDYSQLGHELPTK-----------RPLQIPELEDYVITQIACGSRHSMALTEWGQVLSW 110

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A D+ + Q     R   L+SK     ++ CG  H+  LT  GELY+WGSN
Sbjct: 111 GDNECGQLGHASDQDVIQLPKIVRY--LVSKTVV--QIACGNNHSLALTCCGELYSWGSN 166

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S   L   + P R+       P   ++CG  HT  IS+   + +GW      
Sbjct: 167 IYGQLGVKSPSELSQCNYPMRLTTLLG-IPAAAIACGGNHTFLISKSSAV-FGW------ 218

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 219 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 254



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P S   +V CG  HT  LT+ G++Y  GSN+   LG  + +   L 
Sbjct: 20  EDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSNDYSQLGHELPTKRPLQ 79

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE       +  + Q++CG +H+ A++E G++L+WG             +  GQLGH +
Sbjct: 80  IPE-----LEDYVITQIACGSRHSMALTEWGQVLSWG------------DNECGQLGHAS 122

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D D I  P IV +  +   +Q++CG NH+ AL
Sbjct: 123 DQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL 154


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 173/377 (45%), Gaps = 34/377 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +YG+LG GS  +R  P+    +   S+ A+  G  H+L L   G V++ G N  GQ
Sbjct: 71  WGGNNYGQLGTGS--TRQNPMPARVWRLFSITAIGAGELHSLALKSDGTVWSWGANTNGQ 128

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S+ P  + GL   VV I+ G+ HS  +  DG ++ WG N+ GQLG G    
Sbjct: 129 LGDGTLISRSV-PAPVPGLTN-VVAIAAGFSHSMVLKADGTVWAWGLNAAGQLGDGTPTR 186

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+G+  K  A G   S+A+T  G++ +WG    G+LG G    ++G  R
Sbjct: 187 RLTPV--QVLGLTGV--KDIAAGNVHSLALTADGRLWTWGGNVDGQLGTGD---LVG--R 237

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           ST+   P +        V   + G  HS  +  +G V+ +G     ++          P+
Sbjct: 238 STAAALPGM------TGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPT 291

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  GG H+  L   G ++ WGSN    LG G+     SP +V G      
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKG 351

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           V   + G  H+ A+ +G    W W          G +S GQ+G G  +  + PT      
Sbjct: 352 V--AAGGGLHSVAV-KGNGEVWAW----------GSNSEGQVGDGTYLMKLVPTTARV-- 396

Query: 403 NVKALQVSCGFNHTGAL 419
            V+   VS G  HT AL
Sbjct: 397 LVERADVSAGGGHTLAL 413



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 158/337 (46%), Gaps = 39/337 (11%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L L   G V++ G N++GQLG        + P R+  L   +  I  G  HS A+  D
Sbjct: 58  HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPM-PARVWRLF-SITAIGAGELHSLALKSD 115

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+NGQLG G   ++ +P P  V  L+ +    A  GF  S+ +   G V +W
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAP--VPGLTNVVAIAA--GFSHSMVLKADGTVWAW 171

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   +G+LG G           T   TP  +  L G  VK  AAG +HS  +  +GR++ 
Sbjct: 172 GLNAAGQLGDGTP---------TRRLTPVQVLGLTG--VKDIAAGNVHSLALTADGRLWT 220

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENG 318
           +G   VD  L   G+   R S  + LP    VV    GG H+ +L   G +++WG N+ G
Sbjct: 221 WGGN-VDGQL-GTGDLVGR-STAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAG 277

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
            LG+GS+    +P +V G  +E  +  V+ G +H+ A+  +G +  W            G
Sbjct: 278 QLGLGSVVSTPTPTQVPG-LTE--MVAVTGGGQHSVALRVDGTVWAW------------G 322

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
            ++  QLG G     + P  V     VK +    G +
Sbjct: 323 SNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGLH 359



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 149/325 (45%), Gaps = 23/325 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLGS+ S   P       +  + A+  GG H++ L   G V+A G N   Q
Sbjct: 271 WGKNDAGQLGLGSVVSTPTPTQVPGLTE--MVAVTGGGQHSVALRVDGTVWAWGSNARAQ 328

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P +++GL +     + G  HS A+  +GE++ WG NS GQ+G G    
Sbjct: 329 LGDGTQT-QRLSPCQVTGLTQVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTYLM 387

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K++P   +V     +     + G   ++A+   G    WG     +LG G          
Sbjct: 388 KLVPTTARVL----VERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDG---------- 433

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P  ++ L   +V   +AG  HS  + E+G V+ +G      +      +  +P 
Sbjct: 434 -TTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPV 492

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 341
            +S    +  V  G +H+  L+  G ++ WG N  G LG G++    ++P RV  P  E 
Sbjct: 493 KVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRNAPFRV--PNLEG 550

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWG 365
            V  ++ G +H+ A+ ++G +  WG
Sbjct: 551 VV-SLAAGGEHSLALKADGTVWVWG 574



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 158/367 (43%), Gaps = 32/367 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G++G G+   +  P       + +   ++ GG HTL L   G  +  GLN   Q
Sbjct: 372 WGSNSEGQVGDGTYLMKLVPTTARVLVERA--DVSAGGGHTLALKPDGTAWGWGLNAQSQ 429

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        L P+++  L + V  +S G +HS A+  DG ++ WG N  G +G G    
Sbjct: 430 LGDGTTTARPL-PVQVLNLTR-VAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALN 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P    V+    +     A G   S+A++  G V +WG    G+LG G  +       
Sbjct: 488 RSQP----VKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTVTP------ 537

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
             +   P  +  LEGV V +AA G  HS  +  +G V+++G +         G   R P 
Sbjct: 538 --TRNAPFRVPNLEGV-VSLAAGGE-HSLALKADGTVWVWGRQDTCADPENVGRVLRVPE 593

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L  +  V  G  H+ VL + G L+ WG N  G L  G+     +P RV G    + 
Sbjct: 594 QVQGLTDAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDG---LTG 650

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           V   S G + T A+ +     W W          G ++ GQLG G  V    PT V    
Sbjct: 651 VISFSVGSEQTLAL-KADGTAWAW----------GPNAQGQLGGGLSVPRTRPTQVPTLT 699

Query: 403 NVKALQV 409
           +V+ + +
Sbjct: 700 DVRTVAM 706



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 159/353 (45%), Gaps = 38/353 (10%)

Query: 49   GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
            G+LG G+L  R  PV      +   +A+A G  H L L   G V + G N  G+LG    
Sbjct: 778  GQLGDGTLFPRAEPVPVIGLSE--CRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTT 835

Query: 109  IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            +        + G    V+ I+ G  HS A+  DG +  WG N  GQLG G   ++V+P+ 
Sbjct: 836  VARRAPA--VVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPV- 892

Query: 169  TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             +V+ L+G+    A  GF  S+A+   G V +WG    G+LG          LRS     
Sbjct: 893  -RVQGLTGVAAIAAGDGF--SLALKHDGTVWAWGGNTLGQLGDNTT------LRS---LV 940

Query: 229  PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
            P   + L GV     AAG  HS  +  +G ++ +G     ++   +G  AR+  P  ++ 
Sbjct: 941  PVRTQALTGVTA--VAAGRNHSLALKGDGTLWAWGSNTYGEL--GDGTQARKLAPVQVTS 996

Query: 287  LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQ 345
            L     +  G +H+  +TSGG+++ WG N+ G +G G        P +V G  S      
Sbjct: 997  LTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLTSAV---A 1053

Query: 346  VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            V+ G +H+ A+   + + W W          GH   GQLG G     + P  V
Sbjct: 1054 VAGGGEHSLALLSDRSV-WAW----------GHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G LG G+  +R  P V        + ++A G  H+L L   G V A G N  GQ
Sbjct: 822  WGANAEGELGDGTTVARRAPAVVGPLA--GVLSIAVGARHSLALLGDGSVQAWGSNIQGQ 879

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    +   L P+R+ GL   V  I+ G   S A+  DG ++ WG N+ GQLG      
Sbjct: 880  LGDGTTVSRVL-PVRVQGLTG-VAAIAAGDGFSLALKHDGTVWAWGGNTLGQLGDNTTLR 937

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             ++P+  + + L+G+     A G   S+A+ G G + +WG+   G LG G ++  L    
Sbjct: 938  SLVPV--RTQALTGV--TAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKL---- 989

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRP 281
                  P  +  L GV      AG  HS  +   G+V+ +G     ++    + N    P
Sbjct: 990  -----APVQVTSLTGVSAL--DAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLP 1042

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            + +  L  +  V  GG H+  L S   ++ WG  + G LG G  ++  SP +V
Sbjct: 1043 AQVPGLTSAVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTGMSNLRLSPVQV 1095



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 22/293 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLNDF 100
           WG   +G +G G+  +R +PV  S     +L A+  A G  H+L L+  G V+A G N  
Sbjct: 472 WGANYWGAIGDGTALNRSQPVKVSG----TLVAMTVASGNFHSLALSVDGSVWAWGDNSL 527

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG          P R+  L+  VV ++ G  HS A+  DG +++WG+         + 
Sbjct: 528 GQLGDGTVTPTRNAPFRVPNLEG-VVSLAAGGEHSLALKADGTVWVWGRQDT--CADPEN 584

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +V+ +P +V+ L+     +A  G   SV +   G + +WG    G+L  G        
Sbjct: 585 VGRVLRVPEQVQGLTDAVAVRA--GRCHSVVLRADGTLWAWGRNAEGQLADGT------- 635

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T   TP  +  L GV     + G   +  +  +G  + +G  A  ++         R
Sbjct: 636 --FTDRMTPARVDGLTGVISF--SVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTR 691

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           P+ +  L     V  G  H  VL     L+ WGSN  G +G G++D   +P R
Sbjct: 692 PTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVR 744



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 153/381 (40%), Gaps = 44/381 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+L  G+   R  P          + + + G   TL L   G  +A G N  GQ
Sbjct: 623 WGRNAEGQLADGTFTDRMTPARVDGLT--GVISFSVGSEQTLALKADGTAWAWGPNAQGQ 680

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   ++  +  P ++  L  +V  ++ G  H+  +  D  L+ WG N+ GQ+G G    
Sbjct: 681 LGGGLSVPRT-RPTQVPTLT-DVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDW 738

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+ + +    G+     A   + S+ +   G V S GA  SG+LG G        L 
Sbjct: 739 QAAPVRSGLAASRGL-----AAATQYSLGIALDGSVQSTGANASGQLGDGT-------LF 786

Query: 223 STSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             +E  P + + E   +     A G  H   +  +GRV  +G  A  ++        R P
Sbjct: 787 PRAEPVPVIGLSECRAI-----AGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRAP 841

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +++  L     +  G  H+  L   G +  WGSN  G LG G+      P RVQG    +
Sbjct: 842 AVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGLTGVA 901

Query: 342 PV---DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            +   D  S   KH   +       W WGG          ++ GQLG    +  + P   
Sbjct: 902 AIAAGDGFSLALKHDGTV-------WAWGG----------NTLGQLGDNTTLRSLVPVRT 944

Query: 399 NFGENVKALQVSCGFNHTGAL 419
                V A  V+ G NH+ AL
Sbjct: 945 QALTGVTA--VAAGRNHSLAL 963


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 146/303 (48%), Gaps = 22/303 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLAL-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
           +T+G N +G L          P+ ++G      V Q+ C   HT A   + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314

Query: 368 GSH 370
            SH
Sbjct: 315 PSH 317



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 35/306 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P P  ++ L+ +     +
Sbjct: 23  ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+   
Sbjct: 81  CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
           + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+   E     +V  GG 
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           H+  L+  G  + WGSN +G L +    V   ++ P  + G      V  +SCG++HTA 
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ EG++ T+G G S G       S  GQ G         P ++  G   +  Q+ C   
Sbjct: 250 LTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQIECASY 296

Query: 415 HTGALL 420
           HT A +
Sbjct: 297 HTIAYV 302



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 28/254 (11%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQ---------RRDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISKLPYSE-- 291
           L  + V + + G  HS  +   G+V+ +G  +  ++   E    +  P+ I  L   +  
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKII 130

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGW 350
           +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ QV+ G 
Sbjct: 131 QVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAAGG 189

Query: 351 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNFGENVKAL 407
            H+ A+S     ++GWG +            GQL   GN V      P  +   +N+  +
Sbjct: 190 THSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 408 QVSCGFNHTGALLE 421
            +SCG+ HT  L E
Sbjct: 239 YISCGYEHTAVLTE 252



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           PR +K    G+++  AA+G  HS  +  N RVY  GD +  ++  +      RP  I  L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
              + + V CG  H+  +   G+++ WG+   G LGIG   ++   P +++   +   + 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 402
           QVSCG  H+ A+SE G + +W            G +S GQLG G N      P  V   E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 403 NVKALQVSCGFNHTGAL 419
            +   QV+ G  H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 178/369 (48%), Gaps = 51/369 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++ +   P  I  L    ++ ++
Sbjct: 314 VQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPH---PKLIESLSNTNIELVA 370

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 371 CGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSSISCGP 428

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR I+ L+G++   AA G
Sbjct: 429 WHTAVVTSSGQLFTFGDGTFGALGHGDRKSV---------SLPREIESLKGLRTVQAACG 479

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
             H+A + E            +G+++ +GD   DK     G+   +  P+ +  L     
Sbjct: 480 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKESKLVPTCVVTLVEPNC 537

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CG   T  L+  G +YT GS   G LG    D    P RV+G  S+S V++++CG  
Sbjct: 538 QVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADG-KLPIRVEGKLSKSFVEEIACGAY 596

Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   ++
Sbjct: 597 HVAVLTSRTEVFTWGKGAN------------GRLGHGDTNDRNTPTLVEALKDKQVKSIA 644

Query: 411 CGFNHTGAL 419
           CG N T A+
Sbjct: 645 CGTNFTAAI 653



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  +    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 336 WGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNY 395

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 396 GLLGHGNQVSHWV-PKRVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG 454

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P ++E L G+ T QAA G   + AV               GK+ +WG G  
Sbjct: 455 DR--KSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 512

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + S L          P  +  L     ++A  G   +  +  +G VY  G   
Sbjct: 513 GRLGHGDKESKL---------VPTCVVTLVEPNCQVAC-GHSMTVALSRSGHVYTMGSCV 562

Query: 267 VDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   + +      +  KL  S  EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 563 YGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGD 622

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            +  ++P  V+    +  V  ++CG   TAAI
Sbjct: 623 TNDRNTPTLVEA-LKDKQVKSIACGTNFTAAI 653



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 122/272 (44%), Gaps = 43/272 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  A G + +  VT  G+V SWG    GRLGHG +S +         
Sbjct: 302 LPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVP-------- 353

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI+ L    +++ A G  H+  +  +G +Y +GD   +  L   GN      P  +
Sbjct: 354 -HPKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRV 412

Query: 285 S---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           +   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  P  ++      
Sbjct: 413 NGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLR 472

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            V Q +CG  HTAA+ E             GK+ TWG G              G+LGHG+
Sbjct: 473 TV-QAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK------------GRLGHGD 519

Query: 389 DVDYIHPT-IVNFGENVKALQVSCGFNHTGAL 419
               + PT +V   E     QV+CG + T AL
Sbjct: 520 KESKLVPTCVVTLVE--PNCQVACGHSMTVAL 549



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG  +   G LG G+      P+RV GP     V 
Sbjct: 363 NTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 422

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  +   + 
Sbjct: 423 SISCGPWHTAVVTSSGQLFTFG----DGTF--------GALGHGDRKSVSLPREIESLKG 470

Query: 404 VKALQVSCGFNHTGALLEYV 423
           ++ +Q +CG  HT A++E +
Sbjct: 471 LRTVQAACGVWHTAAVVEVM 490


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 166/341 (48%), Gaps = 41/341 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + ETG V+      FG+   ++NI           LK +V ++I+ G  H++ IT +G L
Sbjct: 9   IPETGAVFT-----FGKSKFADNIPSKF------WLKNDVPLKIACGDEHTALITKNGRL 57

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +M+G N+ GQLGLG K  + +  PT V+ L        A G   ++  T  GKV S G  
Sbjct: 58  FMFGSNNWGQLGLGSK--RTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGGN 115

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFG 263
             G+LG G       F R         I   + +  VK+ AAG   SA + E+G+++++G
Sbjct: 116 SEGQLGLGDCEERTTFQR---------IHAFDSLGPVKMLAAGSNTSAALTESGKLFMWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D    ++   + +HA  P  +        V CG YH+  +T+ G LYT+G  ++G LG+ 
Sbjct: 167 DNTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLT 226

Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
           +  +     P+ V+    + PV QV+CG  HT A++E ++ T+G G              
Sbjct: 227 TEQLPRHRVPQMVKS--IKEPVTQVACGGGHTVALTEERLFTFGLG------------QF 272

Query: 382 GQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLGHG  + +   P  V   +  +  QV+CG NHT  + +
Sbjct: 273 GQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITD 313



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 172/364 (47%), Gaps = 36/364 (9%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK D+ L    G     + +   R F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 29  SKFWLKNDVPLKIACGDEHTALITKNGRLF--MFGSNNWGQLGLGSKRTVNKPTCVKALK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
              +  +ACG  HTL  T  G V+++G N  GQLG+    E   +     RI        
Sbjct: 87  TEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQ----RIHAFDSLGP 142

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V  ++ G + S+A+T  G+L+MWG N+ GQ+GL K++    P P +V+    I     + 
Sbjct: 143 VKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLAKESH--APSPQEVDVGGPI--SWVSC 198

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  S  VT  G + ++G   SG+LG   E       +      P+++K ++    ++A 
Sbjct: 199 GYYHSAFVTADGALYTFGECDSGKLGLTTE-------QLPRHRVPQMVKSIKEPVTQVAC 251

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGG 297
            G  H+  + E  R++ FG     ++     +F+    +R P  +         +V CG 
Sbjct: 252 GGG-HTVALTEE-RLFTFGLGQFGQLGHGTFIFE----SRLPRPVEHFKKGRVCQVACGE 305

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI 356
            HT V+T GG LYT+G   +G LG+G  +  +     V   F +  V   +CG  H   +
Sbjct: 306 NHTAVITDGGLLYTFGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVL 365

Query: 357 SEGK 360
           +  +
Sbjct: 366 ARPR 369



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 151/328 (46%), Gaps = 31/328 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           +ACG  HT  +T+ G ++  G N++GQLG+      + +P  +  LK E V+ ++ G +H
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVN-KPTCVKALKTEKVLLVACGRNH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
           +   T  G+++  G NS GQLGLG    +      ++     +   K  A G   S A+T
Sbjct: 100 TLICTAQGKVFSSGGNSEGQLGLGDCEERTTF--QRIHAFDSLGPVKMLAAGSNTSAALT 157

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             GK+  WG    G++G  +ES           + P   +   G  +   + G+ HSA +
Sbjct: 158 ESGKLFMWGDNTEGQIGLAKES-----------HAPSPQEVDVGGPISWVSCGYYHSAFV 206

Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
             +G +Y FG+    K+    ++    R P ++   K P ++ V CGG HT  LT    L
Sbjct: 207 TADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVTQ-VACGGGHTVALTEE-RL 264

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
           +T+G  + G LG G+        R    F +  V QV+CG  HTA I++G +L     G 
Sbjct: 265 FTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGR 324

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
           HG            LG  N  +   PT+
Sbjct: 325 HGKLG---------LGEENFTNQFKPTV 343


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4204 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPIQLA-GGEQSLFAVTPDGKLFATGYGSG 4261

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T DGE+Y WG+  +G+LG 
Sbjct: 4262 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGH 4320

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4321 GNRMS--YDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4374

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4375 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4424

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4425 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4483 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLG 4529

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4530 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3216 LGHGDN-ATQLKPKLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3274

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3275 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3330

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3331 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3381

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3382 NKKPALVIGLDAVFVNRVACGSSHS 3406



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4290 AVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMS--VADIACGS 4347

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4348 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4405

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4406 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4456

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4457 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4516

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4517 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4568



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 167/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3085 GGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3143

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G ++   +  P  VE L     +  A G   S A++ 
Sbjct: 3144 ALALTLDGKVFSWGEGEDGKLGHGNRS--TLDKPRLVEALRAKKIRDIACGSSHSAAISS 3201

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  +         ++  P+L+  L G +V   A G     +  
Sbjct: 3202 QGELYTWGLGEYGRLGHGDNA---------TQLKPKLVTALHGRRVIQVACGSRDAQTLA 3252

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3253 LTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3312

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3313 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3367

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3368 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4310 WGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4369

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4370 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4427

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4428 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4484

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4485 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4537

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4538 RPRLVAALQGKHIVKVTCGSAHTLALST 4565



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A + H +   AL  G AHTL LT  G VYA G  D+
Sbjct: 692 WGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDY 751

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + +   SL+PL I  L + V ++  G   S A+T +G+LY WGK S     L ++
Sbjct: 752 GKLG-NGSCNSSLQPLLIECLPR-VQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVER 809

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +   +P  +  L        A+G    +A++  G++  WG   + ++
Sbjct: 810 NVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQI 858



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           C G H L +      Y+ G+ D  +LG  +     L P +I  L + V  +  G  +S+A
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHAREL-PTKIESLVRRVQSVYCGCSYSAA 682

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGG 195
           IT+ G LY WG+ + G+LG G    +   +P  V  L        ALG     ++ +T G
Sbjct: 683 ITLRGNLYTWGRGTYGRLGHGNSDDQC--MPAMVMALKDHQVLDVALGSGDAHTLCLTRG 740

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG G  G+LG+G  +S L          P LI+ L  V+   A + F  S  +  
Sbjct: 741 GLVYAWGDGDYGKLGNGSCNSSL---------QPLLIECLPRVQRVFAGSQF--SLALTC 789

Query: 256 NGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
            G++Y +G  +    +++ +       P LI+ L +     V  G  H   L+S GE++ 
Sbjct: 790 EGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFG 849

Query: 312 WGSNENGCLGIGSI---DVLHSPERVQGP 337
           WG N+N  +   S+    +L  P +V  P
Sbjct: 850 WGRNDNQQICPASVCSEPLLRQPIQVTLP 878



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 106/239 (44%), Gaps = 20/239 (8%)

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H  A+  +   Y WG   + +LG G   A+   +PTK+E L     +    G   S A+
Sbjct: 627 RHFLAVDSNHNAYSWGVGDSRRLGHGDCHAR--ELPTKIESLVR-RVQSVYCGCSYSAAI 683

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHS 250
           T  G + +WG G  GRLGHG          S  +  P ++  L+  +V   A  +G  H+
Sbjct: 684 TLRGNLYTWGRGTYGRLGHGN---------SDDQCMPAMVMALKDHQVLDVALGSGDAHT 734

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            C+   G VY +GD    K+     N + +P LI  LP  + V  G   +  LT  G+LY
Sbjct: 735 LCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQRVFAGSQFSLALTCEGQLY 794

Query: 311 TWGSNENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           +WG  +  CLG   ++      S  R+        +  V+ G  H  A+ S G+I  WG
Sbjct: 795 SWG--KASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 126/283 (44%), Gaps = 31/283 (10%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            + +WG N   QLG G K +KV  +PT  + +S +     A G +    V+  GKV + G 
Sbjct: 3047 VMVWGLNDKEQLG-GLKGSKV-KVPTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGE 3104

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYI 261
            G +GRLG G   ++           P  +  L    VK  A  +G  H+  +  +G+V+ 
Sbjct: 3105 GTNGRLGLGVTHNV---------PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3155

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
            +G+    K+     +   +P L+  L   +  ++ CG  H+  ++S GELYTWG  E G 
Sbjct: 3156 WGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGR 3215

Query: 320  LGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWGGSHGTFSED 376
            LG G       P+ V        V QV+CG +   T A++E G + +WG     G F   
Sbjct: 3216 LGHGDNATQLKPKLVTALHGRR-VIQVACGSRDAQTLALTEDGAVFSWG----DGDF--- 3267

Query: 377  GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LG G       P  +     +  +Q+ CG   + AL
Sbjct: 3268 -----GKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLAL 3305



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 16/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG G   +R  P    +  +  ++++ CG +++  +T  G +Y  G   +G+
Sbjct: 641 WGVGDSRRLGHGDCHARELPTKIESLVRR-VQSVYCGCSYSAAITLRGNLYTWGRGTYGR 699

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   +    +  + ++    +V+ ++  +G  H+  +T  G +Y WG    G+LG G  
Sbjct: 700 LGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSC 759

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-ESSILG 219
            + + P+   +ECL  +  ++   G + S+A+T  G++ SWG      LGH   E ++ G
Sbjct: 760 NSSLQPL--LIECLPRV--QRVFAGSQFSLALTCEGQLYSWGKASC--LGHQLVERNVQG 813

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    PRLI  L+  ++   A G  H   +  NG ++ +G
Sbjct: 814 C------SVPRLITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 15/119 (12%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG  ++  LG G       P +++       V  V CG  ++A
Sbjct: 624 CEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVRR--VQSVYCGCSYSA 681

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AI+  G + TWG     GT+        G+LGHGN  D   P +V   ++ + L V+ G
Sbjct: 682 AITLRGNLYTWG----RGTY--------GRLGHGNSDDQCMPAMVMALKDHQVLDVALG 728


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 149/316 (47%), Gaps = 49/316 (15%)

Query: 122  KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
            +K+ V ++ G+ H + I+ DGEL+ WG NS GQLG G    K    P +VE         
Sbjct: 1031 EKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIM 1090

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE-GVKV 240
             + G E SVAV    ++ SWG+   G+LGHG    +L     T +  P+ I++   G KV
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHG----VL-----TPQNLPKKIEDFTGGQKV 1141

Query: 241  KIAAAGFLHSACIDENGRVYIFG-------------DRAVDKMLFQE---GNHARRPSLI 284
               A G+ H+  + ++G ++ FG             +RAV   +      G H  R + I
Sbjct: 1142 LAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAI 1201

Query: 285  SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +          G  H+ +    G++Y+WG+N  G LG G+I+    P+++       P+ 
Sbjct: 1202 A---------AGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDE-LKGKPII 1251

Query: 345  QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            ++SCG  HT AISE   +  WG  G H             LG+G++ + + P ++ F  N
Sbjct: 1252 KISCGHFHTVAISELNSVYCWG-QGEHMC-----------LGNGSNKNELSPKMIEFFIN 1299

Query: 404  VKALQVSCGFNHTGAL 419
             K  +V CG  HT  +
Sbjct: 1300 KKIEKVVCGLYHTATV 1315



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 185/407 (45%), Gaps = 72/407 (17%)

Query: 43   WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WGN   G+LG G    +++  P     F+   +  ++CGG H++ + ++  +Y+ G + +
Sbjct: 1056 WGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRY 1115

Query: 101  GQLG----ISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            GQLG      +N+     P +I      ++V+ I+TGY H+  +   G+L+ +G N +GQ
Sbjct: 1116 GQLGHGVLTPQNL-----PKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQ 1170

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            LGLG    + +P+  +   + GI  ++    A G   S+     G + SWGA   G+LGH
Sbjct: 1171 LGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGH 1230

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
            G   +I   LR      P+ I EL+G  +   + G  H+  I E   VY +G    + M 
Sbjct: 1231 G---NIEKSLR------PKQIDELKGKPIIKISCGHFHTVAISELNSVYCWGQG--EHMC 1279

Query: 272  FQEGNHARR--PSLISKLPYS--EEVVCGGYHTCVLTSG------GELYTWGSNENGCLG 321
               G++     P +I        E+VVCG YHT  +T+       G +Y  G  E+G LG
Sbjct: 1280 LGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYICGGGEHGKLG 1339

Query: 322  IGSIDVLHSPERVQGPFSESPVDQV------------SCGWKHTAAIS-EGKILTWGWGG 368
             G          ++ PF + P   V            S G + +A I+  G + TWG+G 
Sbjct: 1340 TGG--------DLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNGALYTWGYG- 1390

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGF 413
                       + GQ+G+G   D   PT ++  +    L  Q S GF
Sbjct: 1391 -----------NFGQIGNGKTEDMWLPTKISLNDQRFMLFNQNSKGF 1426



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 156/335 (46%), Gaps = 24/335 (7%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKE-VVQISTGY 132
            ++ACG  H   ++  G ++  G N  GQLG   N+G Y   P R+   K   ++ IS G 
Sbjct: 1036 SVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISCGG 1095

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-ALGFEQSVA 191
             HS A+    ++Y WG +  GQLG G    +   +P K+E  +G     A A G+  ++ 
Sbjct: 1096 EHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQ--NLPKKIEDFTGGQKVLAIATGYAHTMV 1153

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLR-STSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +   G + ++G   SG+LG G   +    +R  TSE     I  + G ++   AAG  HS
Sbjct: 1154 LKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSE-----IVGIHGERITAIAAGHSHS 1208

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
                +NG +Y +G  +  ++       + RP  I +L      ++ CG +HT  ++    
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNS 1268

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
            +Y WG  E+ CLG GS     SP+ ++  F    +++V CG  HTA ++  +      G 
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEF-FINKKIEKVVCGLYHTATVTAAE-----NGS 1322

Query: 369  SHGTFSEDGHSSGGQLGHGNDV-----DYIHPTIV 398
              G     G    G+LG G D+     D  HP ++
Sbjct: 1323 DRGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVI 1357



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 116/250 (46%), Gaps = 31/250 (12%)

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G+E    ++  G++ +WG    G+LGHG     +G  +ST    PR ++  +   + 
Sbjct: 1037 VACGWEHIAVISSDGELFTWGNNSQGQLGHGLN---VGKYQST----PRRVETFKSSPII 1089

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY- 298
            + + G  HS  +D++ ++Y +G     ++          P  I      ++V  +  GY 
Sbjct: 1090 MISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYA 1149

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE------SPVDQVSCGWKH 352
            HT VL   G+L+T+G N++G LG+G+      P R++   SE        +  ++ G  H
Sbjct: 1150 HTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIET--SEIVGIHGERITAIAAGHSH 1207

Query: 353  T-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            +   +  G I +WG             +S GQLGHGN    + P  ++  +    +++SC
Sbjct: 1208 SIMCLDNGDIYSWG------------ANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISC 1255

Query: 412  GFNHTGALLE 421
            G  HT A+ E
Sbjct: 1256 GHFHTVAISE 1265



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 19/144 (13%)

Query: 281  PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGP 337
            P L+     +  V CG  H  V++S GEL+TWG+N  G LG G ++V     +P RV+  
Sbjct: 1025 PPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHG-LNVGKYQSTPRRVET- 1082

Query: 338  FSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP- 395
            F  SP+  +SCG +H+ A+ +  +I +W            G S  GQLGHG       P 
Sbjct: 1083 FKSSPIIMISCGGEHSVAVDQSFQIYSW------------GSSRYGQLGHGVLTPQNLPK 1130

Query: 396  TIVNFGENVKALQVSCGFNHTGAL 419
             I +F    K L ++ G+ HT  L
Sbjct: 1131 KIEDFTGGQKVLAIATGYAHTMVL 1154


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 142/283 (50%), Gaps = 33/283 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWG 202
           ++ WG+  +GQLG+G  + +    PT V+ L G+        G   + AV   G + +WG
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQ--DEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWG 58

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LGHG ES            TPR ++ L G+ +   A G  H+A +   G +Y +
Sbjct: 59  GGMYGKLGHGNESG---------HSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTW 109

Query: 263 GDR--AVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGELYTWGSNEN 317
           GD+   V      EG H   P L+ +L   + V    CG +HT  LT   E + WG  + 
Sbjct: 110 GDKENGVAGHGDTEG-HQYTPKLLERLNGKKVVQLSACG-FHTACLTDDHETFAWGEGKF 167

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           G LG G+    HSP  ++    + P  QV+CG  H+A I+ +GK+ T+G GG H      
Sbjct: 168 GRLGNGTERNCHSPRLIESLIGKYPC-QVACGGFHSAVITRDGKMYTFG-GGEH------ 219

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                GQLGH + V+ + PT+V   + V   Q++CG++H+ AL
Sbjct: 220 -----GQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVAL 257



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 140/275 (50%), Gaps = 19/275 (6%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           V++ G  + GQLGI +      EP  +  L+    +  ++ G +H++A+  +G+LY WG 
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQD-EPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGG 59

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              G+LG G ++      P +VE L G+     A G   +  VT  G + +WG   +G  
Sbjct: 60  GMYGKLGHGNESGH--STPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           GHG             +YTP+L++ L G K V+++A GF H+AC+ ++   + +G+    
Sbjct: 118 GHGDTEG--------HQYTPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFG 168

Query: 269 KMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++      +   P LI  L   Y  +V CGG+H+ V+T  G++YT+G  E+G LG     
Sbjct: 169 RLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKV 228

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
               P  V+       V Q++CGW H+ A+ SEG+
Sbjct: 229 NKLKPTLVE-ALDGVVVKQITCGWSHSVALTSEGE 262



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 17/273 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-KALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G+ G+LG+G    +  P    A     +   + CG  HT  +   G +Y  G   +G
Sbjct: 4   WGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGGMYG 63

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG     G+S  P R+  L    +V I+ G  H++ +T  G LY WG   NG  G G  
Sbjct: 64  KLGHGNESGHS-TPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDT 122

Query: 161 AAKVIPIPTKVECLSGIFTKQ-AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  P  +E L+G    Q +A GF  +  +T   +  +WG G  GRLG+G E +   
Sbjct: 123 EGHQY-TPKLLERLNGKKVVQLSACGF-HTACLTDDHETFAWGEGKFGRLGNGTERNC-- 178

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  ++PRLI+ L G      A G  HSA I  +G++Y FG     ++   +  +  
Sbjct: 179 -------HSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL 231

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           +P+L+  L     +++ CG  H+  LTS GE +
Sbjct: 232 KPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 106/220 (48%), Gaps = 12/220 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG G+      P    A    S+  +ACG  HT  +T  GC+Y  G  + G 
Sbjct: 57  WGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGV 116

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G  +  G+   P  +  L  K+VVQ+S    H++ +T D E + WG+   G+LG G + 
Sbjct: 117 AGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTE- 175

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  +E L G +  Q A G   S  +T  GK+ ++G G  G+LGH  + + L   
Sbjct: 176 -RNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKL--- 231

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
                  P L++ L+GV VK    G+ HS  +   G  ++
Sbjct: 232 ------KPTLVEALDGVVVKQITCGWSHSVALTSEGEYHL 265



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 66/132 (50%), Gaps = 17/132 (12%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V CG YHT  + S G+LYTWG    G LG G+     +P RV+     S VD ++CG +H
Sbjct: 38  VTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVD-IACGSRH 96

Query: 353 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVS 410
           TA + S+G + TW            G    G  GHG+   + + P ++      K +Q+S
Sbjct: 97  TAVVTSKGCLYTW------------GDKENGVAGHGDTEGHQYTPKLLERLNGKKVVQLS 144

Query: 411 -CGFNHTGALLE 421
            CGF HT  L +
Sbjct: 145 ACGF-HTACLTD 155


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 53/371 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 312 VQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 368

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 369 CGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 426

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 427 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 477

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPY 289
             H+A + E            +G+++ +GD   DK     G+        R +L++  P 
Sbjct: 478 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTRVALVNVKPN 535

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             +V CG   T  LT+ G +YT GS   G LGI   D    P  V+   SES V++++CG
Sbjct: 536 FCQVACGHSLTVALTTKGHVYTMGSPVYGQLGIPQADG-KLPICVEWKLSESFVEEIACG 594

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++     
Sbjct: 595 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEALKDKDVKS 642

Query: 409 VSCGFNHTGAL 419
           ++CG N T A+
Sbjct: 643 IACGTNFTAAI 653



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 150/342 (43%), Gaps = 50/342 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 334 WGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTCAVTLSGDLYTWGNGTYNC 393

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 394 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 452

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 453 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 510

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDENGRVYIFGD 264
           GRLGHG + + L   R            L  VK         HS    +   G VY  G 
Sbjct: 511 GRLGHGDKEAKLVPTRVA----------LVNVKPNFCQVACGHSLTVALTTKGHVYTMGS 560

Query: 265 RAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGS 314
               ++          P    KLP          + EE+ CG YH  VLTS  E+YTWG 
Sbjct: 561 PVYGQLGI--------PQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGK 612

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             NG LG G  D  ++P  V+    +  V  ++CG   TAAI
Sbjct: 613 GANGRLGHGDTDDRNTPTLVEA-LKDKDVKSIACGTNFTAAI 653



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 139/309 (44%), Gaps = 57/309 (18%)

Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++++WG+ +        N ++G  LG K   + P    +E    +  +  A G   +  
Sbjct: 267 GDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFP--KSLESAVVLDVQNIACGGRHAAL 324

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ SWG    GRLGHG +S +L          P+LI+ L    +++ A G  H+ 
Sbjct: 325 VTKQGEIFSWGEEAGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHTC 375

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
            +  +G +Y +G+   +  L   GN      P  ++   +  +   + CG +HT V+TS 
Sbjct: 376 AVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 435

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
           G+L+T+G    G LG G    +  P  V+       V + +CG  HTAA+ E        
Sbjct: 436 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSS 494

Query: 359 -----GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVNFGENVKALQVS 410
                GK+ TWG G              G+LGHG+    + PT   +VN   N    QV+
Sbjct: 495 SNCSSGKLFTWGDGDK------------GRLGHGDKEAKLVPTRVALVNVKPNF--CQVA 540

Query: 411 CGFNHTGAL 419
           CG + T AL
Sbjct: 541 CGHSLTVAL 549



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ A  ++     +    P LI  L 
Sbjct: 301 PKSLESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALS 360

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG+    C  LG G+      P+RV GP     V 
Sbjct: 361 NTNIELVACGEYHTCAVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVS 420

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   + 
Sbjct: 421 YISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPREVESLKG 468

Query: 404 VKALQVSCGFNHTGALLEYV 423
           ++ ++ +CG  HT A++E +
Sbjct: 469 LRTVRAACGVWHTAAVVEVM 488


>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
 gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
          Length = 1280

 Score =  125 bits (315), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 108/346 (31%), Positives = 163/346 (47%), Gaps = 34/346 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      + +  +  G   ++ L + G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGDGTWNTRTTPVMAKNL--NHVIDIHSGVRSSMALRQDGTVWTWGANENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI   I     P ++ GL   +  IS G  +H  A++ +G ++ WGKN NG+LG G   
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTI 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  LS + T  AA G+  S+A+   G V +WG  GSG LG G         
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  + P  +  L    V   AAG  HS  I ++G V+ +G+     +      H  RP
Sbjct: 221 -TTDRHVPVQVAGL--TDVMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L +   V  GGYH+  +   G +++WG N    LG+ S      P  V G     
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVPGI---E 334

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
            V ++S G  H+ A+ +   + WGW          G++SGGQ+G G
Sbjct: 335 HVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQIGDG 369



 Score =  111 bits (278), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 80/283 (28%), Positives = 139/283 (49%), Gaps = 20/283 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
           WG  + G+LG+G++ +   P          +KA++ G A H + L+E G V+  G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    I  +  P+ ++GL  +V  I+ G ++S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTIQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+A+   G V +WG    G LG G         
Sbjct: 223 DRHVPV--QVAGLTDVMA--IAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T    P  ++ L+ + V +A  G+ HS  +D  G V+ +GD +  ++       +  P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDRAGNVWSWGDNSQQQLGLNSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  + +  E+  GG+H+  +   G ++ WG N  G +G G+
Sbjct: 328 VPVPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGT 370



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 70/250 (28%), Positives = 117/250 (46%), Gaps = 19/250 (7%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +I  GY+H++++   GE+Y WG    GQLG G    +  P+  K   L+ +    +  G 
Sbjct: 37  KIVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WGA  +G+LG G  +++           P  +  L G+K  I+   
Sbjct: 93  RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H   + ENG V+ +G     ++          P L++ L     +  GGY++  L S 
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G ++ WG N +G LG G+    H P +V G    + V  ++ G  H+ AI +   + W W
Sbjct: 203 GTVWAWGVNGSGELGDGTTTDRHVPVQVAG---LTDVMAIAAGGSHSLAIKQDGTV-WAW 258

Query: 367 G-GSHGTFSE 375
           G  ++GT  +
Sbjct: 259 GNNTYGTLGD 268



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 10/178 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G+   R  PV  +      + A+A GG+H+L + + G V+A G N +G 
Sbjct: 208 WGVNGSGELGDGTTTDRHVPVQVAGLT--DVMAIAAGGSHSLAIKQDGTVWAWGNNTYGT 265

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P+++  L + +V ++ G +HS A+   G ++ WG NS  QLGL   A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS 323

Query: 163 KVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +IP+P     + GI   ++ + G   SVA+   G V  WG    G++G G  ++  G
Sbjct: 324 SLIPVP-----VPGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQIGDGTYNNTRG 376


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 23/329 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +  +++  ACGG+HTL LT+ G +Y  G ND 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   +  P  IS L+  +V Q+S G  HS A+T  G+L+ WG N+ GQLG   
Sbjct: 66  GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P P  ++ ++     Q + G    +A+T  G++ +WGA   G+LG G     + 
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVP 184

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   T  L+K L G+ +   A G  HS  + ++G ++ +G     ++   + +   
Sbjct: 185 --------TATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRC 236

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RV 334
            P+ +  L       + CG   +  LT  G ++T G    G LG G+    H  E   R+
Sbjct: 237 YPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT----HGNEILPRM 292

Query: 335 QGPFSESPVDQVSCGWKHTAAI--SEGKI 361
                 S + Q++CG KHT A   S GK+
Sbjct: 293 VFELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 152/309 (49%), Gaps = 21/309 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG    +L ++ RP   SA E + +  ++CG +H+L LT  G +++ G N  G
Sbjct: 61  GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQIS G+ H  A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV P  T V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  +K L  + V+  + G   S  + + G V+  G     ++    G H   
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287

Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+GS    ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347

Query: 336 GPFSESPVD 344
           GP+  + +D
Sbjct: 348 GPWVSNWID 356



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 137/303 (45%), Gaps = 32/303 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+LY  G N +GQLG        +P   P  +  L      Q 
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLG---HDTNNLPNKRPQFISALENYIVTQV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G++ SWG+  +G+LGH         L   S   PR+IK +    V  
Sbjct: 95  SCGLSHSLALTNWGQLFSWGSNATGQLGHD--------LDMVSYPAPRMIKSIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            + G  H   +  +G ++ +G     ++ L   G      +L+  L   P +  + CGG 
Sbjct: 147 ISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
           H+  ++  G ++ WG N  G LG+  +D    P +++   S   V  +SCG   +  ++ 
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLTQ 264

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           EG + T G G    TF        GQLGHG   + I P +V      K  Q++CG  HT 
Sbjct: 265 EGGVFTCGLG----TF--------GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTL 312

Query: 418 ALL 420
           A +
Sbjct: 313 AFV 315



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 26/274 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG   +G+LGLG    + +  P +++       +QAA G   ++ +T  GK+ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH           +     P+ I  LE   V   + G  HS  +   G+++ +G
Sbjct: 63  NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++    +      P +I  +      ++ CG  H   LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
           G+G+         +    +  P+  ++CG  H+ A+S+ G I  WG      TF      
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF------ 224

Query: 380 SGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 412
             GQLG  ND+D   +PT +    ++    +SCG
Sbjct: 225 --GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  L+SR  P          ++ ++CG   ++FLT+ G V+  GL  FGQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
           LG   +    L  +    +  ++ QI+ G  H+ A +   G++Y
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 23/121 (19%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGP----FSESP-VDQVSCGWKHTAAIS-EGKIL 362
           LY WGS  +G LG+G I+     E+V  P    +S++  V Q +CG  HT  ++ +GK+ 
Sbjct: 3   LYCWGSTVHGELGLGGIE----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           T G            ++  GQLGH  N++    P  ++  EN    QVSCG +H+ AL  
Sbjct: 59  TCG------------NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTN 106

Query: 422 Y 422
           +
Sbjct: 107 W 107


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 163/329 (49%), Gaps = 22/329 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P+  +     ++  +  G  HT+ LT++G V++ G ND 
Sbjct: 4   WGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGNNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG  +      +P ++ GL    + +IS G +H+ A    G+L+ WG +S+GQLG   
Sbjct: 64  DQLGHKKQ---RTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNG 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P+P  ++ L+     Q + G   S+A+T  G++ SWG    G+LG G       
Sbjct: 121 TTQ---PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG------- 170

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            +RS  E  P LIK L G+ +   A G  HS  + ++G +Y +G     ++   +  +  
Sbjct: 171 -MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKL 229

Query: 280 RPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L     + + CG   +  L++ G ++T G+   G LG GS      P ++   
Sbjct: 230 HPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIME- 288

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTW 364
              S V QVSCG +HT A+  S G++ ++
Sbjct: 289 LMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 153/333 (45%), Gaps = 19/333 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D  +LG    + R +P      + + +  ++CGG HTL   E G ++  G +  GQL
Sbjct: 59  GNNDLDQLG--HKKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQL 116

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G +      L  +  S     +VQIS G +HS A+T +GELY WG N +GQLGLG + ++
Sbjct: 117 GFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMR-SE 174

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               PT ++ L GI     A G   S A++  G +  WG    G+LG   E + L     
Sbjct: 175 YEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH---- 230

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
                P  +K L  ++VK  A G   SA +  +G V+  G     ++     ++   P  
Sbjct: 231 -----PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRK 285

Query: 284 ISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           I +L  S   +V CG  HT  L  S G +Y++G    G LG        +P+ V GP+  
Sbjct: 286 IMELMGSTVTQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTPQVVLGPWVS 345

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
                V    K T   SE  ++T  + G + +F
Sbjct: 346 PSGVPVITDKKKT---SENVLVTHIFSGGNQSF 375



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 135/301 (44%), Gaps = 33/301 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V Q++ G +H+  +T  GE++  G N   QLG  K+  K    P KVE L      + + 
Sbjct: 36  VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTK----PEKVEGLDFYRITKISC 91

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A    G++  WG+   G+LG             T++  P++IK L    +   +
Sbjct: 92  GGNHTLAFNEWGQLFGWGSDSHGQLG----------FNGTTQPLPKIIKSLATFHIVQIS 141

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
            G  HS  +  NG +Y +G     ++ L     + ++P+LI  L   P +  + CG  H+
Sbjct: 142 CGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAF-IACGSNHS 200

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
             L+  G +Y WG N  G LG+   +    P +++       V  ++CG   +A +S +G
Sbjct: 201 FALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKT-LRSIRVKYIACGEDFSAFLSADG 259

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + T G G              GQLGHG+  + I P  +         QVSCG  HT AL
Sbjct: 260 GVFTCGAGMY------------GQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLAL 307

Query: 420 L 420
           +
Sbjct: 308 V 308



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 33/282 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG   +G+LGLG      I  P +          Q  +G   +V +T  G+V S G 
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH ++ +            P  ++ L+  ++   + G  H+   +E G+++ +G
Sbjct: 61  NDLDQLGHKKQRT-----------KPEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWG 109

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             +  ++ F  G     P +I  L   +  ++ CG  H+  LT+ GELY+WG N +G LG
Sbjct: 110 SDSHGQLGFN-GTTQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLG 168

Query: 322 IGSIDVLHSPERVQGPFSES----PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           +G    + S    Q    +S    P+  ++CG  H+ A+S+   + +GWG          
Sbjct: 169 LG----MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAI-YGWG---------- 213

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            ++ GQLG  ++ + +HPT +    +++   ++CG + +  L
Sbjct: 214 KNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 59/139 (42%), Gaps = 9/139 (6%)

Query: 9   MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWR 61
           M   Y KQ   + S LGI   +I+      FA         WG   YG+LGL   E++  
Sbjct: 171 MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLH 230

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P          +K +ACG   + FL+  G V+  G   +GQLG        L P +I  L
Sbjct: 231 PTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEIL-PRKIMEL 289

Query: 122 K-KEVVQISTGYHHSSAIT 139
               V Q+S G  H+ A+ 
Sbjct: 290 MGSTVTQVSCGKRHTLALV 308


>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 821

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 158/351 (45%), Gaps = 27/351 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G LGLG +     P+      +    A + G   T  +   G ++  G N  GQ
Sbjct: 447 WGRNDFGELGLGVMVYITSPL--QTVTEADWAAASAGQYQTQAVKADGSLWGWGRNHSGQ 504

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P+++ G   +   +S G  H+ A+  DG L+ WG+N NGQLGLG    
Sbjct: 505 LGLGDTDDRHA-PVQVGG-DSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDD 562

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +    P +V   S   T  A  G+  ++AV   G + +WG     R  HGQ    LG   
Sbjct: 563 R--KTPERVGSDSDWATVSAGTGY--TLAVKDDGTLWAWG-----RNSHGQ----LGLGD 609

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +   P  ++          +AG  H+  +  +G ++ +G  +  ++   + ++   P 
Sbjct: 610 TNNRDAP--VQVASDNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPE 667

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +        V  G  HT  + + G L+ WG N +G LG+G  D  H+PE+V G   +S 
Sbjct: 668 QVGSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLGLGDTDERHAPEQVGG---DSD 724

Query: 343 VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQLGHGND 389
              V+ GW+HT AI     L WGWG    G  G    DG  +  Q+G  +D
Sbjct: 725 WAAVTAGWQHTLAIKNDGTL-WGWGLNLYGQLGLGDTDGRHAPMQVGSDSD 774



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 151/328 (46%), Gaps = 31/328 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGLG  E R  P    +       A++ GGA+TL + + G ++A G N FGQ
Sbjct: 147 WGQNNVGQLGLGDTEKRDTPAQVGS--DTDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQ 204

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P ++ G   + V +S G HH+ A+  DG L+ WG+N  GQLGLG    
Sbjct: 205 LGLGDTDDRH-APEQV-GSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTN 262

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P         G  +  A +  G   S+AV   G + SWG    G+LG G        
Sbjct: 263 RNAPEQV------GSHSDWAGVIGGDRHSLAVREDGTLWSWGQNNVGQLGLG-------- 308

Query: 221 LRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                +   R   E  G     A  +AG LH+  +  +G ++ +G     ++   + ++ 
Sbjct: 309 -----DTVERRRPEQVGNDSDWATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNR 363

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +        +  G  ++  + + G L++WG N+ G LG+G  D  H+PE+V G  
Sbjct: 364 DAPVQVGSDNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAPEQVGGGM 423

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWG 365
             +    V+ G  HT  + ++G +  WG
Sbjct: 424 EWAA---VTAGMYHTLGVKADGTLRAWG 448



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 176/416 (42%), Gaps = 63/416 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGLG  ++R  PV   +   +   AL  G  ++L +   G +++ G NDFG+
Sbjct: 347 WGGNGFGQLGLGDTDNRDAPVQVGS--DNDWAALNAGQRYSLAVKNDGSLWSWGWNDFGE 404

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P ++ G   E   ++ G +H+  +  DG L  WG+N  G+LGLG    
Sbjct: 405 LGLGDTDDRHA-PEQVGG-GMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVY 462

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ--------- 213
              P+ T  E         A+ G  Q+ AV   G +  WG   SG+LG G          
Sbjct: 463 ITSPLQTVTEA----DWAAASAGQYQTQAVKADGSLWGWGRNHSGQLGLGDTDDRHAPVQ 518

Query: 214 ----------------------ESSILGFLRSTS------EYTPRLIKELEGVKVKIA-- 243
                                 + ++ G+ ++ +      +   R   E  G     A  
Sbjct: 519 VGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTDDRKTPERVGSDSDWATV 578

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           +AG  ++  + ++G ++ +G  +  ++   + N+   P  ++       V  G  HT  +
Sbjct: 579 SAGTGYTLAVKDDGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDWAAVSAGSRHTLAV 638

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
            + G L+ WG N +G LG+G  D    PE+V    S++    VS G  HT A+     L 
Sbjct: 639 KNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVG---SDTDWAAVSTGSGHTLAVKTDGTL- 694

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           W W          G +S GQLG G+  +   P  V  G +     V+ G+ HT A+
Sbjct: 695 WAW----------GRNSDGQLGLGDTDERHAPEQV--GGDSDWAAVTAGWQHTLAI 738



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 158/358 (44%), Gaps = 46/358 (12%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V C+AF       LA GG HTL +   G ++A G N+ GQLG+ +       P ++ G  
Sbjct: 120 VECTAF-----PVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDT-PAQV-GSD 172

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            +   +S G  ++ A+  DG L+ WG+N  GQLGLG    +    P +V   S      A
Sbjct: 173 TDWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDR--HAPEQVGSDSDWVAVSA 230

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI---KELEGVK 239
             G   ++A+   G + +WG    G+LG G          +T+   P  +    +  GV 
Sbjct: 231 --GRHHTLALKADGTLWAWGRNYFGQLGLGG---------TTNRNAPEQVGSHSDWAGV- 278

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
                 G  HS  + E+G ++ +G   V ++   +    RRP  +        V  G  H
Sbjct: 279 ----IGGDRHSLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSDWATVSAGLLH 334

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
           T  + + G L+ WG N  G LG+G  D   +P +V    S++    ++ G +++ A+ ++
Sbjct: 335 TLAVKNDGTLWAWGGNGFGQLGLGDTDNRDAPVQVG---SDNDWAALNAGQRYSLAVKND 391

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           G + +WGW            +  G+LG G+  D   P  V  G    A  V+ G  HT
Sbjct: 392 GSLWSWGW------------NDFGELGLGDTDDRHAPEQVGGGMEWAA--VTAGMYHT 435



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 28/298 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG  + R  P    +        ++ G  +TL + + G ++A G N  GQ
Sbjct: 547 WGQNYNGQLGLGDTDDRKTPERVGS--DSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQ 604

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+ +       P++++    +   +S G  H+ A+  DG L+ WG+NS+GQLGLG    
Sbjct: 605 LGLGDTNNRDA-PVQVAS-DNDWAAVSAGSRHTLAVKNDGTLWAWGRNSDGQLGLGDTDN 662

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + +P         G  T  AA+  G   ++AV   G + +WG    G+LG          
Sbjct: 663 RDVPEQV------GSDTDWAAVSTGSGHTLAVKTDGTLWAWGRNSDGQLG---------- 706

Query: 221 LRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           L  T E   R   E  G     AA  AG+ H+  I  +G ++ +G     ++   + +  
Sbjct: 707 LGDTDE---RHAPEQVGGDSDWAAVTAGWQHTLAIKNDGTLWGWGLNLYGQLGLGDTDGR 763

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  +        V  G YHT  +   G L  WG N  G LG  +      P+ V G
Sbjct: 764 HAPMQVGSDSDWATVAAGRYHTLAVKDDGTLRAWGRNRFGQLGQRTY-RFDQPQEVPG 820



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
           ++E     + AAG +H+  +  +G ++ +G   V ++   +      P+ +        V
Sbjct: 119 DVECTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQLGLGDTEKRDTPAQVGSDTDWAAV 178

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             GG +T  +   G L+ WG N  G LG+G  D  H+PE+V    S+S    VS G  HT
Sbjct: 179 SAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVG---SDSDWVAVSAGRHHT 235

Query: 354 AAI-SEGKILTWG 365
            A+ ++G +  WG
Sbjct: 236 LALKADGTLWAWG 248


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4054 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4111

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4112 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4170

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4171 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4224

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4225 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4274

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4275 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4332

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4333 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 4379

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4380 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 169/350 (48%), Gaps = 36/350 (10%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLG--ISENIG--YSLEPLRISGLKKEVVQISTGYH 133
            GG+ +LF+ ++ G VYA G    G+LG  ++ N+   + L  LR   +KK  V + +G  
Sbjct: 3026 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKK--VAVHSGGK 3083

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+ A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++
Sbjct: 3084 HALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSA 251
              G++ +WG G  GRLGHG          +T++  P+L+  L G +V   A G     + 
Sbjct: 3142 SQGELYTWGLGEYGRLGHGD---------NTTQLKPKLVTALAGRRVVQVACGSRDAQTL 3192

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGEL 309
             + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE+
Sbjct: 3193 ALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEV 3252

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            +TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG   
Sbjct: 3253 WTWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG--- 3308

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3309 ------DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4140 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4197

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4198 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4255

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4256 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4306

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4307 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4366

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4367 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4418



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 133/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3097 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3156

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + VVQ++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3157 LGHGDNT-TQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3215

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3216 SEGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3271

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3272 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3322

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3323 NKKPALVIGLDAVFVNRVACGSSHS 3347



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4160 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4219

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4220 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4277

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4278 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4334

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4335 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4387

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4388 RPRLVAALQGKHIVKVTCGSAHTLALST 4415



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 130/311 (41%), Gaps = 35/311 (11%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +K +AC     L L++ G +Y   L                EPL +  +  +V  IS
Sbjct: 571 RFQIKQVACCETQMLILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHDVF-IS 618

Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
              H    H  AI  +   Y WG   + +LG G   A+ +P  TK+  L     +    G
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCG 676

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA- 243
              S A+T GG +L+WG G   RLGHG          S     P L+  L + + V +A 
Sbjct: 677 CSYSAAITCGGNLLTWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVAL 727

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            +G  HS  +   G V+ +GD    K+     N + +P L+  LP  + V  G   +  L
Sbjct: 728 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVAL 787

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
           +S G+LYTWG  +  CLG   ++      S  R+        +  V+    H  A+ S G
Sbjct: 788 SSEGQLYTWG--KATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSG 845

Query: 360 KILTWGWGGSH 370
           ++  WG   S 
Sbjct: 846 EVFGWGRNDSQ 856



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P +  A   H +   AL  G AH+L LT  G V+A G  D+
Sbjct: 692 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 751

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V ++  G   S A++ +G+LY WGK +     L ++
Sbjct: 752 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER 809

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + +   +P  V  L        A+     +A++  G+V  WG   S ++     SS
Sbjct: 810 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 865



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H L +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 681

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
           AIT  G L  WG+ +  +LG G    + +P  T V  LS       ALG     S+A+T 
Sbjct: 682 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 739

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L  V+   A + F  S  + 
Sbjct: 740 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SVALS 788

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G++Y +G       +++ +       P L+S L +    +V     H   L+S GE++
Sbjct: 789 SEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 848

Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGP 337
            WG N++  +   S+    +L +P  V  P
Sbjct: 849 GWGRNDSQQICPASVSSEPLLRTPILVSLP 878



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 106/243 (43%), Gaps = 41/243 (16%)

Query: 180  KQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSILGFLRSTSEYTPRLIKELEG 237
            ++AA   EQ +  T    V+ WG     +LG   G +  +  F ++ S   P  I     
Sbjct: 2974 EEAAAAPEQDLPCT----VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHI----- 3024

Query: 238  VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC-- 295
                  A G      + ++G+VY  G+    ++     ++   P    +LP   + V   
Sbjct: 3025 ------AGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPH---QLPVLRQYVVKK 3075

Query: 296  -----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
                 GG H   LT  G++++WG  E+G LG G+   L  P  V+       +  V+CG 
Sbjct: 3076 VAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGS 3134

Query: 351  KHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
             H+AAIS +G++ TWG G              G+LGHG++   + P +V      + +QV
Sbjct: 3135 SHSAAISSQGELYTWGLG------------EYGRLGHGDNTTQLKPKLVTALAGRRVVQV 3182

Query: 410  SCG 412
            +CG
Sbjct: 3183 ACG 3185



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G   +  WG    G+LG  + S I          TP   + L  ++    A G      +
Sbjct: 4047 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4097

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+
Sbjct: 4098 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4157

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
            Y WG  E+G LG G+      P+ V+     S  D ++CG  H+AAI+  G +LTWG G 
Sbjct: 4158 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG- 4215

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 4216 -----------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4248



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG+ E+  LG G       P ++     +  V  V CG  ++A
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSA 681

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           AI+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 682 AITCGGNLLTWG----RGTYA--------RLGHGNSDDRSLPTLV 714



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 20/123 (16%)

Query: 302  VLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQ---VSCGWKHTAAIS 357
            +++  G++Y  G   NG LG+G   V H+ P   Q P     V +   V  G KH  A++
Sbjct: 3033 IVSQDGKVYACGEGTNGRLGLG---VTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089

Query: 358  -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             +GK+ +WG G       EDG     +LGHGN      P +V      K   V+CG +H+
Sbjct: 3090 LDGKVFSWGEG-------EDG-----KLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHS 3137

Query: 417  GAL 419
             A+
Sbjct: 3138 AAI 3140


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 148/330 (44%), Gaps = 30/330 (9%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           E  S   +A G  H+LFLT TG V+A G N  GQLG ++     L P R+  L +++V +
Sbjct: 64  EPLSPMRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL-EDIVSV 122

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            +G  HS A+  DG ++ WG NS+GQLG G    +    P +VE  + +     A G   
Sbjct: 123 VSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRA--EPQRVEGFTDVVA--VAAGDFH 178

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S+ +   G V +WG    G+LG G   + L          P+ +  LEGV     AAGF 
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQGHTQTGL---------WPKPVPGLEGVVAL--AAGFD 227

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
            +  +  +G V  +G  +  ++          P  I  L     V  G YH   L   G 
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSGITSVAAGTYHAVALGKDGT 287

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           ++TWGSN +G LG G+ +    P  + G      V  +  G    A +  G +L W    
Sbjct: 288 VWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAG--SLALLEGGDVLAW---- 341

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                   G ++ GQLG G+  D   P++V
Sbjct: 342 --------GANNSGQLGDGDTADRSTPSLV 363



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 175/382 (45%), Gaps = 40/382 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R  P      E   + A+A GG  +L L   G V+A G N  GQ
Sbjct: 841  WGENQRGQLGDGTTSARVAPGRVEGLE--GIVAVAGGGDTSLALRSDGTVWAWGANASGQ 898

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +G    +   L P RI  L  +V+ I+ G  H+ A+  DG ++ WG N++GQLG G +  
Sbjct: 899  VG-DGTVEDRLTPRRIEALS-DVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGETP 956

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +  +P +V+ L G+ +  A   F  S+AV   G   +WGA  SG+LG G          
Sbjct: 957  SL--LPARVKGLEGVGSVAAGRAF--SLAVRDDGTAWAWGANESGQLGDGSNQ------- 1005

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA---R 279
              S   P  +  ++G++    +AG  H+  + E+G V+ +GD  + ++   +G  A    
Sbjct: 1006 --SRRVPHRVASVKGLRA--VSAGAHHAMALGEDGAVWAWGDNTLGQL--GDGTSAFTVM 1059

Query: 280  RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ--GP 337
             P  +++L   E V  G   +  +   G  ++WGSNE G LG G      SP  V+  G 
Sbjct: 1060 WPQRVAELSDVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGS 1119

Query: 338  FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             + + V   + G    A +++G +  W            G ++ GQLG G       P  
Sbjct: 1120 KARTVVTVGAWGQHAVALMADGTLQAW------------GDNATGQLGDGTTTRRSSPGE 1167

Query: 398  VNFGENVKALQVSCGFNHTGAL 419
            +     V A  VS G  H+ AL
Sbjct: 1168 IRGVTRVTA--VSTGAWHSLAL 1187



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/428 (26%), Positives = 175/428 (40%), Gaps = 87/428 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P     F    + A+A G  H+L L   G V+A G N  GQ
Sbjct: 141 WGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTNFHGQ 198

Query: 103 LG-------------------ISENIGYS------------------------------L 113
           LG                   ++   G+                               L
Sbjct: 199 LGQGHTQTGLWPKPVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGLGTFTQRL 258

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P RI  L   +  ++ G +H+ A+  DG ++ WG NS+GQLG G    + +P P     
Sbjct: 259 SPERIPTLSG-ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP----- 312

Query: 174 LSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           L G+   +A    +  S+A+  GG VL+WGA  SG+LG G          +    TP L+
Sbjct: 313 LPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGD---------TADRSTPSLV 363

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
            EL  V   +   G  H+  + ++G ++ +G     ++          P+ +  L     
Sbjct: 364 PELSAVTAVV--GGAQHALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTNVTS 421

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           +  G +H+      G ++ WG N  G LG G++   H P RV G  S   V  V+    H
Sbjct: 422 MATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS---VRAVAAAGHH 478

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           + A++ +G + TW            G ++ GQLG G   D   P  V+   +V  L ++ 
Sbjct: 479 SIAVAMDGTVWTW------------GRNAAGQLGDGTTRDRARPVAVSGLTSV--LAIAA 524

Query: 412 GFNHTGAL 419
           G +H  AL
Sbjct: 525 GGSHVLAL 532



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 164/380 (43%), Gaps = 36/380 (9%)

Query: 43  WGNGDYGRLGLGSLE-SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G+LG       R  P      E   + ++  G AH+L L   G V+  G N  G
Sbjct: 90  WGGNSAGQLGGADTSFQRLSPARLPVLED--IVSVVSGDAHSLALGADGTVWTWGSNSSG 147

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       + EP R+ G   +VV ++ G  HS  +  DG ++ WG N +GQLG G   
Sbjct: 148 QLGDGTTTDRA-EPQRVEGF-TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQ 205

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             + P P  V  L G+    A  GF+ ++AV   G V SWGA   G+LG G         
Sbjct: 206 TGLWPKP--VPGLEGVVALAA--GFDFTLAVHADGAVSSWGANSFGQLGLGT-------- 253

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T   +P  I  L G+     AAG  H+  + ++G V+ +G  +  ++     N    P
Sbjct: 254 -FTQRLSPERIPTLSGITS--VAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVP 310

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + +  +  +  V      +  L  GG++  WG+N +G LG G      +P  V      S
Sbjct: 311 APLPGVGGARAVASLDAGSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVP---ELS 367

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
            V  V  G +H  A+ +   L W WGG             GQLGHG    ++ P  V   
Sbjct: 368 AVTAVVGGAQHALALRKDGTL-WAWGGGL----------AGQLGHGGSERHVVPATVMGL 416

Query: 402 ENVKALQVSCGFNHTGALLE 421
            NV ++  + G  H+ A LE
Sbjct: 417 TNVTSM--ATGSFHSLAALE 434



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 166/388 (42%), Gaps = 39/388 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG+ +YG+LG G    R  P  V     +  ++  +   G H + L   G + A G N  
Sbjct: 1092 WGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNAT 1151

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GQLG       S  P  I G+ + V  +STG  HS A+ +DG ++ WG N  GQLG G  
Sbjct: 1152 GQLGDGTTTRRS-SPGEIRGVTR-VTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTT 1209

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             A+ +P+P  V+ L  +    A  G   SVAV   G V +WG    G+LG G        
Sbjct: 1210 TARAVPVP--VQGLRDVVAIAA--GGYHSVAVRSDGTVWTWGYNTFGQLGDGT------- 1258

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              S S   P  + +LEGV+      G  HS  +  +G V  +G  A  ++   +G+   R
Sbjct: 1259 --SESRALPVQVHKLEGVQA--VTGGDHHSLALHADGTVSGWGHNASGQL--GDGSRTDR 1312

Query: 281  --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
              P  +  +    EV  G  HT  L   G ++TWG N +G LG G          V GP 
Sbjct: 1313 YTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDG----------VTGPR 1362

Query: 339  SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                   VS G     AI  G   ++  G   G F+  G +S GQLG G++     P  +
Sbjct: 1363 MRLVPKPVS-GLPAATAIGAGAWHSFASGPEEGAFTW-GRNSHGQLGVGDNAPRAEPQRM 1420

Query: 399  NFGENVKAL----QVSCGFNHTGALLEY 422
                 +K +      S      G L+ +
Sbjct: 1421 KLLSGLKVIAGGADTSLAMTQEGVLMSW 1448



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 185/467 (39%), Gaps = 111/467 (23%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R RPV  S     S+ A+A GG+H L L   G V+A G N  GQ
Sbjct: 491 WGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAAGGSHVLALRSDGDVWAWGYNALGQ 548

Query: 103 LGISENIGYSLEPLRISGLK---------------------------------------- 122
           LG   + G  L P+R+ GL                                         
Sbjct: 549 LGDGTS-GDKLTPVRVPGLAPIQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR 607

Query: 123 ---------KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
                     ++  IS G  H+ A+  DG ++ WG N+ GQLG G    +  P+  +V  
Sbjct: 608 LSPVAVKGLSDIRNISVGSAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPV--QVRN 665

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL--------------- 218
           L+GI       G   S+A+   G V +WG+ G G+LG G  +S +               
Sbjct: 666 LTGITAVSG--GRSHSLALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSGIQALH 723

Query: 219 -GFLRSTSEYTPRLIK----------------------ELEGV-KVKIAAAGFLHSACID 254
            G L   + +  + ++                      ++ G+ +V+  AAG  H+  + 
Sbjct: 724 PGHLHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVR 783

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            +G V  +G  A  ++      H  R   +  +  +  V  GG H+ VL   G ++TWG 
Sbjct: 784 ADGSVVAWGANASGQLGDGGTTHGARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGE 843

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
           N+ G LG G+     +P RV+G   E  V     G    A  S+G +  W          
Sbjct: 844 NQRGQLGDGTTSARVAPGRVEG--LEGIVAVAGGGDTSLALRSDGTVWAW---------- 891

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             G ++ GQ+G G   D + P  +    +V  + ++ G +H  A+ E
Sbjct: 892 --GANASGQVGDGTVEDRLTPRRIEALSDV--MVIALGESHALAVGE 934



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 160/368 (43%), Gaps = 35/368 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P           +A+A   A +L L E G V A G N+ GQ
Sbjct: 291 WGSNSSGQLGDGTWNDRAVPAPLPGVG--GARAVASLDAGSLALLEGGDVLAWGANNSGQ 348

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +    S  P  +  L   V  +  G  H+ A+  DG L+ WG    GQLG G    
Sbjct: 349 LGDGDTADRS-TPSLVPELSA-VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P    V  L+ + +   A G   S+A    G V +WG    G+LG G          
Sbjct: 407 HVVP--ATVMGLTNVTSM--ATGSFHSLAALEDGSVWAWGRNSYGQLGDGT--------- 453

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T  + P  +  L  V+  +AAAG  HS  +  +G V+ +G  A  ++         RP 
Sbjct: 454 VTERHVPVRVPGLPSVRA-VAAAGH-HSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPV 511

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  GG H   L S G+++ WG N  G LG G+     +P RV G    +P
Sbjct: 512 AVSGLTSVLAIAAGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPG---LAP 568

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           +  V+ G   + A++ +G + TWG G     F        GQLG G  V  + P  V   
Sbjct: 569 IQSVAAGTYFSMALANDGTVWTWGEG-----FE-------GQLGDGGGVQRLSPVAVKGL 616

Query: 402 ENVKALQV 409
            +++ + V
Sbjct: 617 SDIRNISV 624



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 141/298 (47%), Gaps = 23/298 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  +R  PV         + A+A GG H++ +   G V+  G N FGQ
Sbjct: 1196 WGANGFGQLGDGTTTARAVPVPVQGLRD--VVAIAAGGYHSVAVRSDGTVWTWGYNTFGQ 1253

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   +   +L P+++  L+  V  ++ G HHS A+  DG +  WG N++GQLG G +  
Sbjct: 1254 LGDGTSESRAL-PVQVHKLEG-VQAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTD 1311

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +++ + G+   +A  G   +VA+   G V +WG    G+LG G     +    
Sbjct: 1312 RYTPV--RLKDVDGLTEVRA--GAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRM---- 1363

Query: 223  STSEYTPRLI-KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   RL+ K + G+    A  AG  HS         + +G R     L    N  R 
Sbjct: 1364 -------RLVPKPVSGLPAATAIGAGAWHSFASGPEEGAFTWG-RNSHGQLGVGDNAPRA 1415

Query: 281  PSLISKLPYSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
                 KL    +V+ GG  T + +T  G L +WGS+ +G LG+G +    SP RV  P
Sbjct: 1416 EPQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRVLLP 1473


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 176/379 (46%), Gaps = 36/379 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+           PV     E  ++ A+A G   +L +   G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LGI   +  S  P+++ GLK +VV +S G +HS A+  DG ++ WG N +G+LG     
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              + +P +V+ LS +    A  GF  S+A+   G V  WG G   + G    S      
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                Y P  I+ L   KV   AAG+ HS  + ++G V+++G  +   +    G H+  P
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLP 335

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSE 340
             +  L     V  G  H+  LT  G ++ WG+N  G LG  +    L+ P +V+     
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL--- 392

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
             V  ++ G  HT AI     + W WG ++           GQLG+G       PT V  
Sbjct: 393 DNVVAIAAGGSHTLAIKRDGTV-WSWGANN----------KGQLGNGTYKSSYIPTCVK- 440

Query: 401 GENVKALQVSCGFNHTGAL 419
           G N KA+ V  G  H+ A+
Sbjct: 441 GLN-KAVLVEAGSQHSLAV 458



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 188/425 (44%), Gaps = 77/425 (18%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+  YG LG    E  + PV     +  ++ A+A G  H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372

Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  EN  +SL  P ++  L   VV I+ G  H+ AI  DG ++ WG N+ GQLG G  
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIAAGGSHTLAIKRDGTVWSWGANNKGQLGNGTY 430

Query: 161 AAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWG--------------- 202
            +  IP      C+ G+   +A L   G + S+AV   G V  WG               
Sbjct: 431 KSSYIP-----TCVKGL--NKAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDIL 483

Query: 203 ----------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELE 236
                           AGG   +          G G +     F  S+     +LI+ L+
Sbjct: 484 SPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LD 542

Query: 237 GVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC 295
            +K V+  AAG+ HS  +  +G V+ +GD  +D    +  N + +P  I  L    +V  
Sbjct: 543 NIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKE-KYLNFSEKPVKIKGLSGVVKVAA 601

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G YH+  L   G +++WG N  G LG G+ +    P RV+G    + V  ++ G  H+ A
Sbjct: 602 GKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVAIAAGDYHSMA 658

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           +  +G +  W            G +  GQLG  N      P  V   +NV A  ++ G  
Sbjct: 659 LKKDGTVWVW------------GSNIRGQLGRRNIEFSTVPLKVEKLDNVVA--IAAGDT 704

Query: 415 HTGAL 419
           H+ AL
Sbjct: 705 HSVAL 709



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 185/381 (48%), Gaps = 42/381 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+ +    PV     +   + A++ G  H+L L + G V+  G  ++GQ
Sbjct: 66  WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
                   ++  P+++  L K +V I+ G+  S A+  DG ++ WG N++G+LG+G  + 
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K   +P KV+ L  +    A  G   S+A+   G V SWG    G LG+          R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227

Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            T +YT   P  +K L  V + I+A GF HS  ++++G V+I+G   ++K    + +++ 
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  I  L     +  G  H+  L   G ++ WG N  G LG    +    P +V+G   
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGL-- 341

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIV 398
              V  V+ G  H+ A+++   + W W          G+++ GQLG  N+   ++ P  V
Sbjct: 342 -KNVVAVAAGRLHSVALTKNGTI-WAW----------GNNAFGQLGRENNSFSLNLPYKV 389

Query: 399 NFGENVKALQVSCGFNHTGAL 419
            + +NV A  ++ G +HT A+
Sbjct: 390 KWLDNVVA--IAAGGSHTLAI 408



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           +++++A G  H+L +   G V++ G  D       + + +S +P++I GL   VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKEKYLNFSEKPVKIKGLSG-VVKVAAG 602

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +HS A+  DG ++ WG N+ GQLG G +    +P+  +V+ L+ +     A G   S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
           +   G V  WG+   G+LG           R   E++  P  +++L+ V V I AAG  H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705

Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
           S  + ++G V+++G   DR + K + 
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 35/300 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +V+    G  H+ AI  DG ++ WG N  GQLG G      IP+  +V+ L  +    A 
Sbjct: 43  KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKDVVAVSA- 99

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S+A+   G V  W     G   +GQ  S     R  +  TP  +KEL+ + V I 
Sbjct: 100 -GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELKNI-VAI- 147

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG+  S  +  +G V+ +G     ++       +  P  +  L     V  G YH+  L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207

Query: 304 TSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
              G +++WG NE+G LG    +   +  P RV+G    S V  +S G  H+ A+++   
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGL---SDVIAISAGGFHSIALNKDGA 264

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           + W WGG  G   ++G           D  YI P  + +    K + ++ G+ H+ AL +
Sbjct: 265 V-WIWGG--GIIEKNGKI---------DNSYI-PVRIRWLN--KVVAIAAGYRHSIALKD 309



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ E+ + PV       +++ A+A G  H++ L + G V+  G N  GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   NI +S  PL++  L   VV I+ G  HS A+  DG +++WG   +  L     ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733

Query: 163 KVIPIPTK 170
             IP+  K
Sbjct: 734 SSIPVQIK 741


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4050 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4107

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4108 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4166

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4167 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4220

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4221 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4270

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4271 --GRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4328

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4329 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 4375

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4376 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 144/319 (45%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 3041 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3100

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  ++ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 3101 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3159

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P    V  L+G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3160 VTQLKP--KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3212

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H 
Sbjct: 3213 ----SEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3268

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P  I  L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G
Sbjct: 3269 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3328

Query: 337  PFSESPVDQVSCGWKHTAA 355
                  V++V+CG  H+ A
Sbjct: 3329 -LDAVFVNRVACGSSHSIA 3346



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4136 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4193

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4194 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4251

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4252 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVVKVECGSQFS 4302

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4303 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4362

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4363 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4414



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 131/264 (49%), Gaps = 19/264 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3094 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3153

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N+      L ++   + VVQ++ G   +   A+T DG ++ WG    G+LG G  
Sbjct: 3154 LGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                   P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 3214 EGS--DTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV--- 3268

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--A 278
                    P+ I  L G +V   A G LH   + + G+VY +GD   D      GN    
Sbjct: 3269 ------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFVN 3320

Query: 279  RRPSLISKLP--YSEEVVCGGYHT 300
            ++P+L+  L   +   V CG  H+
Sbjct: 3321 KKPALVIGLDAVFVNRVACGSSHS 3344



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 157/351 (44%), Gaps = 59/351 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +S           
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVSQ---------- 3033

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG++Y  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 3034 DGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3091

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 3092 FSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAISSQGE 3142

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P L+  L      +V CG     T  LT  G +++WG 
Sbjct: 3143 LYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGD 3202

Query: 315  NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
             + G LG G     D  H  ER+ G      V Q+ CG + + A++  G++ TWG G  +
Sbjct: 3203 GDFGKLGRGGSEGSDTPHEIERLSG----IGVVQIECGAQFSLALTRAGEVWTWGKGDYY 3258

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 3259 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3297



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+ ++ G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3023 GGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3081

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3082 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISS 3139

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          + ++  P+L+  L G +V   A G     +  
Sbjct: 3140 QGELYTWGLGEYGRLGHGD---------NVTQLKPKLVVALAGRRVVQVACGSRDAQTLA 3190

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3191 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVW 3250

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3251 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3305

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3306 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4156 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGR 4215

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4216 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4273

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4274 -GSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4330

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4331 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4383

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4384 RPRLVAALQGKHIVKVTCGSAHTLALST 4411



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 148/357 (41%), Gaps = 46/357 (12%)

Query: 32  SSTLQRRFAAL-WGNGDYGRLGLG-------SLESRWRPVVCSAFEKHSLKALACGGAHT 83
           S+T Q+R  AL W +    + G         S ES   P +   F+   +K +AC     
Sbjct: 525 STTPQQRIYALGWPSLSKDQQGFSAEPTLSWSGESTAVPTLSCRFQ---IKQVACCETQM 581

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH----HSSAIT 139
           L L++ G +Y   L                EPL +  +  EV  IS   H    H  AI 
Sbjct: 582 LILSQEGKLYTWRLAK-----------PEAEPLPMEEVAHEVF-ISIAGHCEGRHFLAID 629

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +   Y WG   + +LG G   A+ +P  TK+  L     +    G   S A+T GG +L
Sbjct: 630 SNHNAYSWGTGEDHRLGHGDTHARAVP--TKIAALEQHCVQSVYCGCSYSAAITCGGNLL 687

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIA-AAGFLHSACIDENG 257
           +WG G   RLGHG          S     P L+  L + + V +A  +G  HS  +   G
Sbjct: 688 TWGRGTYARLGHGN---------SDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEG 738

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            V+ +GD    K+     N + +P L+  LP  + V  G   +  L+S G+LY+WG  + 
Sbjct: 739 LVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSLALSSEGQLYSWG--KA 796

Query: 318 GCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
            CLG   ++      S  R+        +  V+    H  A+ S G++  WG   S 
Sbjct: 797 TCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQ 853



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + R  P +  A   H +   AL  G AH+L LT  G V+A G  D+
Sbjct: 689 WGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDY 748

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V ++  G   S A++ +G+LY WGK +     L ++
Sbjct: 749 GKLG-NGNCNGSLQPILVESLPR-VQRVFAGSQFSLALSSEGQLYSWGKATCLGHQLVER 806

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + +   +P  V  L        A+     +A++  G+V  WG   S ++     SS
Sbjct: 807 SVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICPASVSS 862



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 123/270 (45%), Gaps = 24/270 (8%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSS 136
           C G H L +      Y+ G  +  +LG  +    ++ P +I+ L++  VQ +  G  +S+
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAV-PTKIAALEQHCVQSVYCGCSYSA 678

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTG 194
           AIT  G L  WG+ +  +LG G    + +P  T V  LS       ALG     S+A+T 
Sbjct: 679 AITCGGNLLTWGRGTYARLGHGNSDDRSLP--TLVVALSDHMVVDVALGSGDAHSLALTS 736

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG G  G+LG+G  +  L          P L++ L  V+   A + F  S  + 
Sbjct: 737 EGLVFAWGDGDYGKLGNGNCNGSL---------QPILVESLPRVQRVFAGSQF--SLALS 785

Query: 255 ENGRVYIFGDRAV--DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
             G++Y +G       +++ +       P L+S L +    +V     H   L+S GE++
Sbjct: 786 SEGQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVF 845

Query: 311 TWGSNENGCLGIGSID---VLHSPERVQGP 337
            WG N++  +   S+    +L +P  V  P
Sbjct: 846 GWGRNDSQQICPASVSSEPLLRTPILVSLP 875



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 98/224 (43%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G   +  WG    G+LG  + S I          TP   + L  ++    A G      +
Sbjct: 4043 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4093

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+
Sbjct: 4094 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4153

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
            Y WG  E+G LG G+      P+ V+     S  D ++CG  H+AAI+  G +LTWG G 
Sbjct: 4154 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITASGHVLTWGKG- 4211

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 4212 -----------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4244



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG+ E+  LG G       P ++     +  V  V CG  ++A
Sbjct: 620 CEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSA 678

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           AI+  G +LTWG     GT++        +LGHGN  D   PT+V
Sbjct: 679 AITCGGNLLTWG----RGTYA--------RLGHGNSDDRSLPTLV 711


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 159/334 (47%), Gaps = 20/334 (5%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P      + + ++ +ACG  +T+ +T  G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  E     L+   I GL   V  +I+ G  H+ A+   G+L+ WG N  GQLGL  
Sbjct: 64  GQLG-HEKARKRLQ--LIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   P  V+ L      Q A G E S+A+T  G++ SWG+   G+LG G       
Sbjct: 121 VDCTE-RTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGS------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              + +E  P+ I  L  V +   A G  H+  I ++G V+ +G     ++   +     
Sbjct: 174 --HTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  +  L  ++     CG   +  LT  G ++T G+   G LG G+      P +V   
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVM-E 290

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
              S V Q+SCG +HT A+  S G++  WG GG+
Sbjct: 291 LMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGA 324



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 141/318 (44%), Gaps = 16/318 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN DYG+LG    ++R R  +    +    K +ACG  HTL + E G +++ G N  GQL
Sbjct: 59  GNNDYGQLG--HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQL 116

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G++        P  +  L   V VQI+ G  HS A+T DGELY WG N  GQLG+G    
Sbjct: 117 GLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGIGSHTV 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             I  P ++  L+ +     A G   +V ++  G V +WG    G+LG            
Sbjct: 177 TEIK-PKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLND--------- 226

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  ++ L   KV  AA G   S  +  +G V+  G     ++    G +   P 
Sbjct: 227 TQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPR 286

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            + +L  S   ++ CG  HT  L  S G +Y WG    G LG  +     +P  V GP+S
Sbjct: 287 QVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGPWS 346

Query: 340 ESPVDQVSCGWKHTAAIS 357
            +    +     H+  I 
Sbjct: 347 SASGSSMKFDLYHSPQID 364



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 43/332 (12%)

Query: 101 GQLGI----SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG+     ENI     P ++   K  EV QI+ G +++  IT DG++Y  G N  GQL
Sbjct: 10  GELGLGGIEDENI---FMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQL 66

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G  K   ++  IP     L     K+ A G   ++AV   G++ SWG    G+LG     
Sbjct: 67  GHEKARKRLQLIPG----LDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQLGLNS-- 120

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                    +E TPR++K L    +   A G  HS  +  +G +Y +G     ++    G
Sbjct: 121 ------VDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQLGI--G 172

Query: 276 NHA------RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +H       +R   ++ +P +  + CGGYHT V++  G ++ WG N  G LG+       
Sbjct: 173 SHTVTEIKPKRIITLAAVPIAF-IACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P +++     + V   +CG + +  ++ +G + T G G              GQLGHGN
Sbjct: 232 VPCQLRT-LRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMY------------GQLGHGN 278

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            ++ I P  V         Q+SCG  HT AL+
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 29/274 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   +G+LGLG    + I +P +V+       +Q A G   +V +T  G+V S G 
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH +    L           +LI  L+    K  A G  H+  ++E G+++ +G
Sbjct: 61  NDYGQLGHEKARKRL-----------QLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWG 109

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                ++ L       R P ++  L  S   ++ CG  H+  LT+ GELY+WGSN  G L
Sbjct: 110 CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNREGQL 169

Query: 321 GIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
           GIGS  V    P+R+    +  P+  ++CG  HT  IS+ G +  WG      TF     
Sbjct: 170 GIGSHTVTEIKPKRIIT-LAAVPIAFIACGGYHTVVISKSGVVFAWG----RNTF----- 219

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
              GQLG  +    I P  +    N K    +CG
Sbjct: 220 ---GQLGLNDTQQRIVPCQLRTLRNAKVCYAACG 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 25/223 (11%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +  WG+   G LG       LG +   + + PR +   +  +V+  A G  ++  I  +G
Sbjct: 1   MFCWGSTIHGELG-------LGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDG 53

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +VY  G+    ++  ++    +R  LI  L     +++ CG  HT  +   G+L++WG N
Sbjct: 54  QVYSCGNNDYGQLGHEKAR--KRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCN 111

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
             G LG+ S+D      R+      S + Q++CG +H+ A++ +G++ +W          
Sbjct: 112 MKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSW---------- 161

Query: 375 EDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             G +  GQLG G + V  I P  +     V    ++CG  HT
Sbjct: 162 --GSNREGQLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHT 202



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 54/126 (42%), Gaps = 1/126 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL   + R  P          +   ACG   ++FLT  G V+  G   +GQ
Sbjct: 214 WGRNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQ 273

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG    +   L    +  +   V QIS G  H+ A+    G +Y WG    GQLG     
Sbjct: 274 LGHGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASR 333

Query: 162 AKVIPI 167
           +   P+
Sbjct: 334 SATTPL 339


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 153/329 (46%), Gaps = 20/329 (6%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G+  + R  P+     +   + A A G AH+L +T  G V A G N  G
Sbjct: 67  WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126

Query: 102 QLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    I  S  P+ +       V  ++ G++HS A+T  G ++ WG NS GQLG G +
Sbjct: 127 QLGDGTTINRS-TPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V   SG      A G   S+A+T  G V +WG   +G+LG G        
Sbjct: 186 TNRSTPV--AVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTR------ 237

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T+  TP ++    G  V   A G  HS  +   G    +G+  V + L    N  R 
Sbjct: 238 ---TNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQ-LGDGSNINRD 293

Query: 281 PSLISKLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            S+  +LP    V  V GG  H+  LTS G + +WGSN  G LG G+    ++P  V  P
Sbjct: 294 ASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSVSLP 353

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWG 365
              + +  V+ G     A+ S G +L WG
Sbjct: 354 PGVT-ITAVAAGDLFGLALTSAGTVLAWG 381



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 155/356 (43%), Gaps = 37/356 (10%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
           V SA  +H+  A       T+    +  V A G N +GQLG      Y   P+ + GL K
Sbjct: 39  VSSAIAQHTSVAQHRPSPTTV---ASDAVLAWGDNYYGQLGDGTTNNYRTVPIPV-GLPK 94

Query: 124 --EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
             EV   + G  HS A+T  G +  WG+N+ GQLG G    +  P+   V    G     
Sbjct: 95  GTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPV--DVRLPPGTTVTA 152

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A GF  S+A+T  G V +WG   +G+LG G           T+  TP  +    G  + 
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR---------TNRSTPVAVSFPSGTVIT 203

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-LISKLPYSEEVVC---GG 297
             AAG +HS  +   G V+ +GD +  ++   +G    R + ++  LP    V     GG
Sbjct: 204 AVAAGGMHSLALTSAGTVFAWGDNSTGQL--GDGTRTNRSTPVVVGLPVGTIVTAIAGGG 261

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
            H+  +TS G    WG+N  G LG GS     +   V+ P   + V  V+ G  H+ A+ 
Sbjct: 262 SHSLAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTT-VTAVAGGLTHSLALT 320

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           S G +L+W            G ++ GQLG G   D   P  V+    V    V+ G
Sbjct: 321 SVGTVLSW------------GSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAG 364



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 122/292 (41%), Gaps = 15/292 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  PV        ++ A+A G  H+L LT  G V+A G N  GQ
Sbjct: 120 WGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +S     V+  ++ G  HS A+T  G ++ WG NS GQLG G + 
Sbjct: 180 LGDGTRTNRS-TPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRT 238

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V    G      A G   S+AVT  G   +WG    G+LG G         
Sbjct: 239 NRSTPV--VVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSN-----IN 291

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R  S +    ++   G  V   A G  HS  +   G V  +G     ++          P
Sbjct: 292 RDASVH----VRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTP 347

Query: 282 SLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
             +S  P      V  G      LTS G +  WG N  G LG G+  V  +P
Sbjct: 348 GSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 103/246 (41%), Gaps = 12/246 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV  S      + A+A GG H+L LT  G V+A G N  GQ
Sbjct: 172 WGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S   +    +   V  I+ G  HS A+T  G    WG N  GQLG G    
Sbjct: 232 LGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN 291

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +   V    G      A G   S+A+T  G VLSWG+   G+LG G          
Sbjct: 292 RDASV--HVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTAR------- 342

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP  +    GV +   AAG L    +   G V  +G   V + L       RR  
Sbjct: 343 --DRNTPGSVSLPPGVTITAVAAGDLFGLALTSAGTVLAWGGNIVGQ-LGDGTTTVRRTP 399

Query: 283 LISKLP 288
           + + LP
Sbjct: 400 VAASLP 405



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 117/281 (41%), Gaps = 48/281 (17%)

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-------------VTGGGKVLSWGAGG 205
           ++AA+VI       CL+ + T   A G   ++A                   VL+WG   
Sbjct: 15  RRAARVI---AGWFCLAVVVTAVQAGGVSSAIAQHTSVAQHRPSPTTVASDAVLAWGDNY 71

Query: 206 SGRLGHGQESSILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+LG G          +T+ Y   P  +   +G +V  AA G  HS  +   G V  +G
Sbjct: 72  YGQLGDG----------TTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWG 121

Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGC 319
             AV ++   +G    R + +  +LP    V  V  G+ H+  LTS G ++ WG N  G 
Sbjct: 122 RNAVGQL--GDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQ 179

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
           LG G+     +P  V  P S + +  V+ G  H+ A+ S G +  W            G 
Sbjct: 180 LGDGTRTNRSTPVAVSFP-SGTVITAVAAGGMHSLALTSAGTVFAW------------GD 226

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +S GQLG G   +   P +V          ++ G +H+ A+
Sbjct: 227 NSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAV 267



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 12/134 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WGN   G+LG GS  +R   V        ++ A+A G  H+L LT  G V + G N+
Sbjct: 273 ARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNN 332

Query: 100 FGQLGI----SENI--GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           +GQLG       N     SL P         +  ++ G     A+T  G +  WG N  G
Sbjct: 333 WGQLGDGTARDRNTPGSVSLPP------GVTITAVAAGDLFGLALTSAGTVLAWGGNIVG 386

Query: 154 QLGLGKKAAKVIPI 167
           QLG G    +  P+
Sbjct: 387 QLGDGTTTVRRTPV 400


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 163/322 (50%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK DI L    G     + +   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 29  SKFWLKNDIPLRIACGDEHTALITENGKLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 86

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
              ++ +ACG  HTL  T  G VYA+G N  GQLG+ +     S + L     +  +  +
Sbjct: 87  SEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKML 146

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G + S+A+TV G+L+MWG N+ GQ+GLGK++     + +  E   G      + G+  
Sbjct: 147 AAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQ----VSSPQEVSVGQPISWVSCGYYH 202

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G + ++G   SG+LG       LG  +      P+L+K ++   V+  A G  
Sbjct: 203 SALVTVDGALYTFGERDSGKLG-------LGTHQLPGHRVPQLVKSIKE-PVRQVACGGG 254

Query: 249 HSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E G VY FG     ++     +F+    +R P L+         +VVCG  HT 
Sbjct: 255 HTVALAE-GNVYTFGLGQFGQLGHGTFIFE----SRVPRLVEHFKKGRACQVVCGENHTA 309

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           V+T  G LYT+G   +G LG+G
Sbjct: 310 VITEDGLLYTFGDGRHGKLGLG 331



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 167/340 (49%), Gaps = 39/340 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGEL 144
           + E+G V+      FG+   ++NI           LK ++ ++I+ G  H++ IT +G+L
Sbjct: 9   IPESGAVFT-----FGKSKFADNIPSKF------WLKNDIPLRIACGDEHTALITENGKL 57

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +M+G N+ GQLGLG K    +  PT V+ L     +  A G   ++  T  GKV + G  
Sbjct: 58  FMFGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVQLVACGRNHTLICTAKGKVYASGGN 115

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F R           + +G  +K+ AAG   SA +  +G+++++GD
Sbjct: 116 SEGQLGLGDCEERTSFKRLD-------FFDSQG-PIKMLAAGSNTSAALTVSGKLFMWGD 167

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
               ++   + +    P  +S       V CG YH+ ++T  G LYT+G  ++G LG+G+
Sbjct: 168 NTEGQIGLGKESQVSSPQEVSVGQPISWVSCGYYHSALVTVDGALYTFGERDSGKLGLGT 227

Query: 325 IDVL--HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +     P+ V+    + PV QV+CG  HT A++EG + T+G G              G
Sbjct: 228 HQLPGHRVPQLVKS--IKEPVRQVACGGGHTVALAEGNVYTFGLG------------QFG 273

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLGHG  + +   P +V   +  +A QV CG NHT  + E
Sbjct: 274 QLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITE 313



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 39/332 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           +ACG  HT  +TE G ++  G N++GQLG+   +  + +P  +  LK E VQ ++ G +H
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVQLVACGRNH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
           +   T  G++Y  G NS GQLGLG    +     T  + L    +    K  A G   S 
Sbjct: 100 TLICTAKGKVYASGGNSEGQLGLGDCEER-----TSFKRLDFFDSQGPIKMLAAGSNTSA 154

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G G+ES +          +P+ +    G  +   + G+ HS
Sbjct: 155 ALTVSGKLFMWGDNTEGQIGLGKESQV---------SSPQEVSV--GQPISWVSCGYYHS 203

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS-EEVVCGGYHTCVLTS 305
           A +  +G +Y FG+R   K+    G H     R P L+  +     +V CGG HT  L  
Sbjct: 204 ALVTVDGALYTFGERDSGKLGL--GTHQLPGHRVPQLVKSIKEPVRQVACGGGHTVALAE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
           G  +YT+G  + G LG G+        R+   F +    QV CG  HTA I+E  +L   
Sbjct: 262 GN-VYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTF 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             G HG            LG  N  +   PT+
Sbjct: 321 GDGRHGKLG---------LGEENFTNQFKPTL 343



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 43  WGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G G +G+LG G+   ESR  P +   F+K     + CG  HT  +TE G +Y  G    
Sbjct: 267 FGLGQFGQLGHGTFIFESRV-PRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRH 325

Query: 101 GQLGI-SENIGYSLEP 115
           G+LG+  EN     +P
Sbjct: 326 GKLGLGEENFTNQFKP 341



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  ++++P +C  F K++++   CGG H + L
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCGGCHMVVL 365


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4151 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4208

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+  +  +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4209 GRLGVGGSDSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4267

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4268 GNRMS--YDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGD---- 4321

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4322 -----SEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 4371

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4372 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4429

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4430 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTW------------GDNDEGQLG 4476

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4477 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 152/340 (44%), Gaps = 30/340 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 3085 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3144

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  ++ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 3145 KLGHGNRTTLD-KPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3203

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++ P   +V  L+G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3204 ATQLKP--KQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3256

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H 
Sbjct: 3257 ----SEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3312

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P  I  L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G
Sbjct: 3313 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3372

Query: 337  PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
                  V++V+CG  H+ A          WG  + +  E+
Sbjct: 3373 -LDAVFVNRVACGSSHSIA----------WGLPNASLDEE 3401



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 134/265 (50%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3138 WGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3197

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P +++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3198 LGHGDN-ATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3256

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3257 SEGSA--TPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3312

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3313 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3363

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3364 NKKPALVIGLDAVFVNRVACGSSHS 3388



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 134/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4237 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS--VADIACGS 4294

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4295 AHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRP--KLVEALLGYRAIDIACGSGDAQTL 4352

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4353 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4403

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4404 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAGE 4463

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4464 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4515



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 54/353 (15%)

Query: 88   ETGC-VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
            E  C V   GLND  QLG            S+ I   L P+ ISG  K +  +S      
Sbjct: 3024 ELPCTVMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHISGGSKSLFIVSQ----- 3077

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT 193
                 DG+++  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T
Sbjct: 3078 -----DGKVFACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3130

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              GKV SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I
Sbjct: 3131 LDGKVFSWGEGEDGKLGHGNRTTL---------DKPRLVEALRAKKIRDVACGSSHSAAI 3181

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGEL 309
               G +Y +G     ++   +     +P  ++ L      +V CG     T  LT  G +
Sbjct: 3182 SSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAV 3241

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            ++WG  + G LG G  +   +P  ++   S   V Q+ CG + + A++  G++ TWG G 
Sbjct: 3242 FSWGDGDFGKLGRGGSEGSATPHEIER-LSGIGVIQIECGAQFSLALTRAGEVWTWGKGD 3300

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             +            +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 3301 YY------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 3341



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 178/397 (44%), Gaps = 57/397 (14%)

Query: 42   LWGNGDYGRLG-----------LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TET 89
            +WG  D  +LG                SR RP+  S            GG+ +LF+ ++ 
Sbjct: 3031 VWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIHIS------------GGSKSLFIVSQD 3078

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
            G V+A G    G+LG+       L P ++  L + VV+   + +G  H+ A+T+DG+++ 
Sbjct: 3079 GKVFACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFS 3137

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            WG+  +G+LG G +    +  P  VE L     +  A G   S A++  G++ +WG G  
Sbjct: 3138 WGEGEDGKLGHGNRT--TLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEY 3195

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
            GRLGHG  ++         +  P+ +  L G +V   A G     +  + E+G V+ +GD
Sbjct: 3196 GRLGHGDNAT---------QLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3246

Query: 265  RAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                K+       +  P  I +L      ++ CG   +  LT  GE++TWG  +   LG 
Sbjct: 3247 GDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGH 3306

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            G    +  P+ + G      V  V+ G  H  A+++ G++  WG         ++ H   
Sbjct: 3307 GGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---------DNDH--- 3353

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3354 GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       S+  +ACG AH+  +T +G V   G   +G+
Sbjct: 4257 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGR 4316

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  IT D  ++ WG    G+LG G 
Sbjct: 4317 LGHGDSED-QLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG- 4374

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4375 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4431

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     + G VY +GD    ++        +
Sbjct: 4432 -------RRPKKVAALQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQ 4484

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4485 RPRLVAALQGKHIVKVTCGSAHTLALST 4512



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 135/314 (42%), Gaps = 42/314 (13%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           +  +K +AC  +  L L++ G +Y        +LG  E     LEP  I  L +E +   
Sbjct: 570 RFQVKQIACSESLLLLLSQDGKLYNC------RLGKPE-----LEPQPIEELAQETILSI 618

Query: 130 TGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQA 182
            G+    H  AI  +   Y WG   + +LG G   A+ +P  TK+     C+  +F    
Sbjct: 619 AGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP--TKISALDRCVKAVFC--- 673

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             G   S A+T  G + +WG G  GRLGHG          S  +  P ++  L   ++  
Sbjct: 674 --GCSYSAAITWSGNLYTWGRGTYGRLGHGN---------SDDQCVPAIVMALAEYEIID 722

Query: 243 AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            A  +G  HS C+   G VY +GD    K+     N + +P L+  LP  + +  G   +
Sbjct: 723 VALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETLPRVQRIFAGAQSS 782

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLH---SPERVQGPFSESPVDQVSCGWKHTAAIS 357
             LT+ G LY+WG  +  CLG   ++      S  R+        +  V+ G  H  A++
Sbjct: 783 MALTTEGHLYSWG--KASCLGHQQVERSVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALT 840

Query: 358 E-GKILTWGWGGSH 370
             G++  WG   S 
Sbjct: 841 SCGEVFGWGRNDSQ 854



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 87/169 (51%), Gaps = 4/169 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + +  P +  A  ++ +   AL  G AH+L LT  G VYA G  D+
Sbjct: 690 WGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDY 749

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N   SL+P+ +  L + V +I  G   S A+T +G LY WGK S       ++
Sbjct: 750 GKLG-NGNCNSSLQPILVETLPR-VQRIFAGAQSSMALTTEGHLYSWGKASCLGHQQVER 807

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           + +   +P  V  L        A+G    +A+T  G+V  WG   S ++
Sbjct: 808 SVQGCSVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 113/229 (49%), Gaps = 16/229 (6%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           R A  WG G+  RLG G   +R  P   SA ++  +KA+ CG +++  +T +G +Y  G 
Sbjct: 634 RNAYSWGAGEDHRLGHGDTHARAVPTKISALDR-CVKAVFCGCSYSAAITWSGNLYTWGR 692

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
             +G+LG   +    +  + ++  + E++ ++  +G  HS  +T +G +Y WG    G+L
Sbjct: 693 GTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKL 752

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-E 214
           G G   + + PI   VE L  +  ++   G + S+A+T  G + SWG      LGH Q E
Sbjct: 753 GNGNCNSSLQPI--LVETLPRV--QRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVE 806

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            S+ G         PRL+  L+  ++   A G  H   +   G V+ +G
Sbjct: 807 RSVQGC------SVPRLVSSLQHKRLVDVAVGVAHCLALTSCGEVFGWG 849



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 22/274 (8%)

Query: 50  RLGLGSLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISE 107
           RLG   LE    P       + ++ ++A  C G H L +      Y+ G  +  +LG  +
Sbjct: 596 RLGKPELE----PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGD 651

Query: 108 NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
               ++ P +IS L + V  +  G  +S+AIT  G LY WG+ + G+LG G    + +P 
Sbjct: 652 THARAV-PTKISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPA 710

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
                    I       G   S+ +T  G V +WG G  G+LG+G  +S L  +    E 
Sbjct: 711 IVMALAEYEIIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPI--LVET 768

Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            PR+ +   G +  +A    G L+S      G+    G + V++ +         P L+S
Sbjct: 769 LPRVQRIFAGAQSSMALTTEGHLYSW-----GKASCLGHQQVERSV----QGCSVPRLVS 819

Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            L +    +V  G  H   LTS GE++ WG N++
Sbjct: 820 SLQHKRLVDVAVGVAHCLALTSCGEVFGWGRNDS 853



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 98/224 (43%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G   +  WG    G+LG  + S I          TP   + L  ++    A G      +
Sbjct: 4144 GASTIYGWGHNHRGQLGGLEGSRI---------KTPTPCEALSLLRPVQLAGGEQSLFAV 4194

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G+++  G  +  ++     +    P+L+  L +       V  GG H   LT+ GE+
Sbjct: 4195 TPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEV 4254

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
            Y WG  E+G LG G+      P+ V+     S  D ++CG  H+AAI S G +LTWG G 
Sbjct: 4255 YAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVAD-IACGSAHSAAITSSGHVLTWGKG- 4312

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGHG+  D + P +V      +A+ ++CG
Sbjct: 4313 -----------RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG 4345



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 15/119 (12%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   + S    Y+WG+ E+  LG G       P ++     +  V  V CG  ++A
Sbjct: 622 CEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKISA--LDRCVKAVFCGCSYSA 679

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AI+  G + TWG     GT+        G+LGHGN  D   P IV      + + V+ G
Sbjct: 680 AITWSGNLYTWG----RGTY--------GRLGHGNSDDQCVPAIVMALAEYEIIDVALG 726


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 160/362 (44%), Gaps = 62/362 (17%)

Query: 43  WGNGDYGRLGL-GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG     RLG  G+ +   +P +   FE  +++ +ACGG HTL L E GC+++ G N +G
Sbjct: 15  WGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQYG 74

Query: 102 QLGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    +   L+  R IS L  +++ ++ G +HS+A+ V+G ++ WG   NG+LG   +
Sbjct: 75  QLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDE 134

Query: 161 AAKVIP-----IPT--KVEC---------LSGIFT------------------------- 179
             + IP     +P   K+ C           G++T                         
Sbjct: 135 QTRTIPCRITHLPRAHKIFCGYHITAAITDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIF 194

Query: 180 -------KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                   Q A G    +  T  G V +WG+   G+LG G+ + I          +P L+
Sbjct: 195 DDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYS--------SPVLL 246

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYS 290
             L G+ V   AAG  HSA +   G ++ +G  A  +    + N    P L+  L   + 
Sbjct: 247 TSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFI 306

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   T  L+   ++Y +G+N  G LG GS     +P ++   FS      ++CG 
Sbjct: 307 LKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL--FFSIPGTIDITCGH 364

Query: 351 KH 352
            H
Sbjct: 365 FH 366



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/300 (31%), Positives = 136/300 (45%), Gaps = 31/300 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           + Q++ G  H+  +  DG L+ +G N  GQLG G K    +     +  LS       A 
Sbjct: 46  IQQVACGGGHTLVLLEDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIA-VAC 104

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S A+   G V +WG G +GRLGH  E +     R T  + PR  K   G  +  A 
Sbjct: 105 GRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRIT--HLPRAHKIFCGYHITAAI 162

Query: 245 AGF-LHSACIDENGRV---YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
               L++    E+G++    +       K++F + N A     IS+L       CG  H 
Sbjct: 163 TDDGLYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLA-----ISQL------ACGDRHC 211

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
            V T  G++YTWGSNE G LGIG  + ++S   +    +   V  V+ G +H+AA++  G
Sbjct: 212 LVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTG 271

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + TWG G              GQ GHG+  D   P +V     V  L+V CG N T AL
Sbjct: 272 SLFTWGCGAE------------GQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVAL 319


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 149/292 (51%), Gaps = 29/292 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  + +RP+   A +   +K  ACG  HTL  TE G VYATG N+ G
Sbjct: 54  MFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L     S  + ++ Q+S G + S+A+T DGEL+MWG NS GQ+GL 
Sbjct: 114 QLGLGDTEERNSFHLISFFTS--RHKIKQLSAGANISAALTEDGELFMWGDNSEGQIGLN 171

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +   +P    V    G      + G+  S  VT  GK+ ++G    G+LG   E  I 
Sbjct: 172 SISNVYVPRQVTV----GKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQLI- 226

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQ 273
                 +   P+L+  +    +++A  G  H+  + E   VY FG     ++     +FQ
Sbjct: 227 ------NHRKPQLVSGISEKVIQVACGGG-HTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ 278

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
               A  P+++  +   +   + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 279 ----APEPAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLG 326



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 155/313 (49%), Gaps = 40/313 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           L+CG  HT  +T    +Y  G N++GQLG+ S++  Y   P+ +  LK E V+++  G +
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVY--RPICVKALKSEKVKLAACGRN 93

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T  G +Y  G N+ GQLGLG    +          L   FT     KQ + G   
Sbjct: 94  HTLVSTEGGNVYATGGNNEGQLGLGDTEER------NSFHLISFFTSRHKIKQLSAGANI 147

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S A+T  G++  WG    G++G    S++         Y PR +    G  +   + G+ 
Sbjct: 148 SAALTEDGELFMWGDNSEGQIGLNSISNV---------YVPRQV--TVGKPISWISCGYY 196

Query: 249 HSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVV---CGGYHTCV 302
           HSA +   G++Y FG+    K+     Q  NH R+P L+S +  SE+V+   CGG HT V
Sbjct: 197 HSAFVTMEGKLYTFGEPECGKLGLPSEQLINH-RKPQLVSGI--SEKVIQVACGGGHTVV 253

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAISE-GK 360
           LT    +YT+G    G LG+GS  +  +PE  +     +  +  +SCG  HTA I++ G 
Sbjct: 254 LTEKA-VYTFGQGRFGQLGLGSF-IFQAPEPAILEHVKDQKIRHISCGENHTALITDVGH 311

Query: 361 ILTWGWGGSHGTF 373
           + T+G  G HG  
Sbjct: 312 MYTFG-DGRHGKL 323



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 164/337 (48%), Gaps = 37/337 (10%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           ++G V+      FG+  ++ENI     P +        + +S G  H++ IT + +LYM+
Sbjct: 6   DSGAVFT-----FGKTRLAENI-----PSKFWFKNDVPIYLSCGDEHTALITGNNKLYMF 55

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N+ GQLGLG K+A   PI   V+ L     K AA G   ++  T GG V + G    G
Sbjct: 56  GSNNWGQLGLGSKSAVYRPIC--VKALKSEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 113

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG G       F    S +T R        K+K  +AG   SA + E+G ++++GD + 
Sbjct: 114 QLGLGDTEERNSF-HLISFFTSRH-------KIKQLSAGANISAALTEDGELFMWGDNSE 165

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++     ++   P  ++       + CG YH+  +T  G+LYT+G  E G LG+ S  +
Sbjct: 166 GQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPSEQL 225

Query: 328 LH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
           ++   P+ V G  SE  V QV+CG  HT  ++E  + T+G     G F        GQLG
Sbjct: 226 INHRKPQLVSG-ISEK-VIQVACGGGHTVVLTEKAVYTFG----QGRF--------GQLG 271

Query: 386 HGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G+ +     P I+   ++ K   +SCG NHT  + +
Sbjct: 272 LGSFIFQAPEPAILEHVKDQKIRHISCGENHTALITD 308



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K  +  +ACGG H L  
Sbjct: 315 FGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCHMLIF 360


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 157/338 (46%), Gaps = 34/338 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E   RP +  +    ++  +ACG  HT  +T TG +Y+   G ++ 
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P R+SG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRVSGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
               K +  P +VE LSG+ T   A G   + A+                GK+ +WG G 
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +  +  +G+V   G+ 
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
           AV   L    +  R P L+      E+V+   CG YH  VLT   E++TWG   NG LG 
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACGSYHVAVLTGRNEVFTWGKGANGRLGH 387

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           G I+    P  V+    +  V  ++CG   TAAI + K
Sbjct: 388 GDIEDRKVPTLVE-VLKDRAVRYIACGANFTAAICQYK 424



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 53/369 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   + + G V+  G +  G+LG    E+    + P  +  L    V  ++ G  H
Sbjct: 84  CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDC---VRPRLVESLTVSNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G      IP   +V   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIP--KRVSGALEGLQVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG        L+S S   PR ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGD-------LKSVS--YPREVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
            I E              G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 250 AIVEVIVTRSSSSVKLSAGKLFTWGDG--DKHRLGHGDKETRLKPTCVATLIDHDFYRVA 307

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G++ + G+   G LG    D    P  V+       V Q++CG  H A
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDG-RIPCLVEDKIVGEQVIQIACGSYHVA 366

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++   ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG 
Sbjct: 367 VLTGRNEVFTWGKGAN------------GRLGHGDIEDRKVPTLVEVLKDRAVRYIACGA 414

Query: 414 NHTGALLEY 422
           N T A+ +Y
Sbjct: 415 NFTAAICQY 423



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 96/184 (52%), Gaps = 19/184 (10%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G  H+A + +NG V+ +G+ +  ++         RP L+  L  S  + V CG +HTC +
Sbjct: 85  GVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAV 144

Query: 304 TSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
           T+ GELY+WG  ++  G LG G+ DV H  P+RV G      V  VSCG  HTA I S G
Sbjct: 145 TTTGELYSWGDGTHNVGLLGHGN-DVGHWIPKRVSGALEGLQVAYVSCGTWHTALITSMG 203

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ T+G G            S G LGHG+     +P  V     +K + V+CG  HT A+
Sbjct: 204 QLFTFGDG------------SFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAI 251

Query: 420 LEYV 423
           +E +
Sbjct: 252 VEVI 255


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 183/446 (41%), Gaps = 85/446 (19%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G   YG LGLG ++ R  P     F++ ++  +A G  H   LT  G V   G N  G
Sbjct: 43  VFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSG 102

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG   N   S  P +I  LK   +  IS+  G  + + I+ DG+LY  G N+ GQLG G
Sbjct: 103 QLGHGNNKSIST-PKKIESLKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQLGHG 161

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG---GSGRLGHGQES 215
            ++   +  PT V+ L        +  +  S+ VT   +  S         GR  +GQ  
Sbjct: 162 TQSN--LSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQ-- 217

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             LG   +  E TP++I+ L   +V   A G  HS  +  +G V+  G     ++   + 
Sbjct: 218 --LGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHNDT 275

Query: 276 NHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI----------- 322
               +P LI  L   +  +  CG YHT V    GE+Y +G N+ G LGI           
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPK 335

Query: 323 ---------------GSIDVLHSPERVQGPFSES-------------------------- 341
                          G+ + LHS +    P S+S                          
Sbjct: 336 QIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQY 395

Query: 342 -----PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
                 + +++CG  H+ A+ E G++ T+G G              GQLG GN  D   P
Sbjct: 396 LSKKVNISKIACGCYHSIALCESGQLFTFGRGNH------------GQLGQGNTEDQKLP 443

Query: 396 TIVNFGENVKALQVSCGFNHTGALLE 421
             V    + K + ++ GF HT  L++
Sbjct: 444 KQVASLHDKKVIGIAGGFYHTIVLVK 469



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 156/334 (46%), Gaps = 30/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE--------TGCVYAT 95
           G  +YG+LG G+  +   P +  A +   +  ++C   H+L +T+           VY+ 
Sbjct: 151 GYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSV 210

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G ND GQLG  E+  + + P  I  L  ++V+Q + G HHS  +TV GE++  G N NGQ
Sbjct: 211 GRNDNGQLG-QEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQ 269

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG     ++  P+   +E L   F  QAA G+  ++     G++ ++G    G+LG    
Sbjct: 270 LGHNDTKSRNQPVL--IESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETN 327

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACIDENGRVYIFGDR-AVDK 269
              L          P+ I+E   V   I  +G     LHS            G+  A+ +
Sbjct: 328 GQAL--------IQPKQIQEFLTVS-NIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQ 378

Query: 270 MLFQEGN-HARRPSL--ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L +  N + ++P +  +SK     ++ CG YH+  L   G+L+T+G   +G LG G+ +
Sbjct: 379 GLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTE 438

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
               P++V     +  V  ++ G+ HT  + + K
Sbjct: 439 DQKLPKQV-ASLHDKKVIGIAGGFYHTIVLVKQK 471



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 35/285 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++++G+NS G+LGLG    +   IP++V     +   Q A G E    +T  G VL+ G 
Sbjct: 41  VFVFGQNSYGELGLGDVQER--SIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGF 98

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYI 261
            GSG+LGHG   SI          TP+ I+ L+ +++    +A G  + A I ++G++Y 
Sbjct: 99  NGSGQLGHGNNKSI---------STPKKIESLKNIRITHISSANGCENLAIISQDGKLYT 149

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE--------LYT 311
            G     ++     ++   P+L+  L  ++   V C  YH+ ++T            +Y+
Sbjct: 150 CGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYS 209

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
            G N+NG LG        +P+ ++   +   V Q +CG  H+  ++            HG
Sbjct: 210 VGRNDNGQLGQEHTCHEITPKIIRS-LNTRQVIQTACGLHHSVFVT-----------VHG 257

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                G +  GQLGH +      P ++   +N   +Q +CG+ HT
Sbjct: 258 EVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHT 302


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 186/394 (47%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 4241 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 4298

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+     +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 4299 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 4357

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 4358 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 4411

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI+++  V+ +GD    K+     
Sbjct: 4412 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKL----- 4461

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTWG  +   LG GS+D
Sbjct: 4462 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4519

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 4520 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 4566

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 4567 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 152/340 (44%), Gaps = 30/340 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 3153 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 3212

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  ++ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 3213 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 3271

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            + ++ P    V  L+G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 3272 STQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG----- 3324

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H 
Sbjct: 3325 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 3380

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P  I+ L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G
Sbjct: 3381 RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 3440

Query: 337  PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
                  V++V+CG  H+ A          WG  + T  E+
Sbjct: 3441 -LDAVFVNRVACGSSHSIA----------WGLPNATLEEE 3469



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+  + G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 3135 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 3193

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 3194 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 3251

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  S+         +  P+L+  L G +V   A G     +  
Sbjct: 3252 QGELYTWGLGEYGRLGHGDNST---------QLKPKLVAALAGRRVIQVACGSRDAQTLA 3302

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 3303 LTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 3362

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 3363 TWGKGDYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 3417

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 3418 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 4327 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 4384

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 4385 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 4442

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +     V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 4443 CINDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 4493

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 4494 VALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 4553

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 4554 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 4605



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 3206 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 3265

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 3266 LGHGDN-STQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGG 3324

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3325 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 3380

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 3381 -------RKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 3431

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 3432 NKKPALVIGLDAVFVNRVACGSSHS 3456



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 158/351 (45%), Gaps = 59/351 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +            
Sbjct: 3097 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVGQ---------- 3145

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            +G++Y  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 3146 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 3203

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 3204 FSWGEGEDGKLGHGNRTTL---------DKPRLVETLRSKKIRDVACGSSHSAAISSQGE 3254

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   + +   +P L++ L      +V CG     T  LT  G +++WG 
Sbjct: 3255 LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGD 3314

Query: 315  NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
             + G LG G     D  H  ER+ G      V Q+ CG + + A++  G++ TWG G  +
Sbjct: 3315 GDFGKLGRGGSEGSDTPHEIERLSG----IGVIQIECGAQFSLALTRAGEVWTWGKGDYY 3370

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 3371 ------------RLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTD 3409



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 125/268 (46%), Gaps = 17/268 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +       ++  +ACG AH+  +T +G V   G   +G+
Sbjct: 4347 WGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGR 4406

Query: 103  LGISENIGYSLEPLRISGL---KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L   +   +   +G   +  I  D  ++ WG    G+LG G 
Sbjct: 4407 LGHGDSED-QLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRG- 4464

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K+E L+G+   +   G + SVA+T  G V +WG G   RLGHG    +  
Sbjct: 4465 -GSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHV-- 4521

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   A G LH     ++G VY +GD    ++        +
Sbjct: 4522 -------RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQ 4574

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTS 305
            RP L++ L   +  +V CG  HT  L++
Sbjct: 4575 RPRLVAALQGKHIVKVTCGSAHTLALST 4602



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 4/176 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G Y RLG G+ + +  P V  A  +H +   AL  G AH+L LT  G VYA G  D+
Sbjct: 695 WGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADY 754

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG + N+  S+ P+ +  L K V ++  G   S A+T DG+LY WGK S     L ++
Sbjct: 755 GKLG-NGNLNGSMSPVLVESLPK-VQRVFAGAQFSMALTTDGQLYSWGKASCLGHQLVER 812

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +A+   +P  +  L        A+G    +A++  G+V  WG   S ++     SS
Sbjct: 813 SAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSSVSS 868



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 132/316 (41%), Gaps = 46/316 (14%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           K  ++ + C  +  L L+E G +Y   +                EP  +  +  E + +S
Sbjct: 575 KFQVQQIVCSESIVLILSEDGKLYNWRM-----------FKPETEPQLLEEIAHETI-VS 622

Query: 130 TGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV----ECLSGIFTKQ 181
              H    H  AI ++   Y WG   + +LG G   A+ +P  TK+     C+  +F   
Sbjct: 623 IASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVP--TKITLLDRCVKAVFC-- 678

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A+T  G + +WG G   RLGHG          S  +  P ++  L   ++ 
Sbjct: 679 ---GCSYSAAITCSGNLYTWGRGTYARLGHGN---------SDDQPLPTVVMALTEHEII 726

Query: 242 IAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
             A  +G  HS C+   G VY +GD    K+     N +  P L+  LP  + V  G   
Sbjct: 727 DVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQRVFAGAQF 786

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           +  LT+ G+LY+WG  +  CLG   ++        P  + G   +  VD V+ G  H  A
Sbjct: 787 SMALTTDGQLYSWG--KASCLGHQLVERSAQWCSVPRLISGLQHKRIVD-VAVGVAHCLA 843

Query: 356 ISE-GKILTWGWGGSH 370
           +S  G++  WG   S 
Sbjct: 844 LSSCGEVFGWGRNDSQ 859



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 18/230 (7%)

Query: 38  RFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           R A  WGNG+  RLG G   +R  P   +  ++  +KA+ CG +++  +T +G +Y  G 
Sbjct: 639 RNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFCGCSYSAAITCSGNLYTWGR 697

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
             + +LG   +    L  + ++  + E++ ++  +G  HS  +T +G +Y WG    G+L
Sbjct: 698 GTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKL 757

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G     + P+   VE L  +  ++   G + S+A+T  G++ SWG      LGH    
Sbjct: 758 GNGNLNGSMSPV--LVESLPKV--QRVFAGAQFSMALTTDGQLYSWGKASC--LGH---- 807

Query: 216 SILGFLRSTSEY--TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                +  ++++   PRLI  L+  ++   A G  H   +   G V+ +G
Sbjct: 808 ---QLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSSCGEVFGWG 854



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 27/150 (18%)

Query: 253 IDENGRVY---IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           + E+G++Y   +F     +  L +E  H    S+ S         C G H   +      
Sbjct: 591 LSEDGKLYNWRMFKPE-TEPQLLEEIAHETIVSIASH--------CEGRHFMAIDINRNA 641

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
           Y+WG+ E+  LG G       P ++     +  V  V CG  ++AAI+  G + TWG   
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKIT--LLDRCVKAVFCGCSYSAAITCSGNLYTWG--- 696

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             GT++        +LGHGN  D   PT+V
Sbjct: 697 -RGTYA--------RLGHGNSDDQPLPTVV 717


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 165/342 (48%), Gaps = 38/342 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLGLG  +   +P +  A    ++  +ACG  HT  +T  G +Y    G+++ 
Sbjct: 300 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 359

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG+ +  +V  ++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 360 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 418

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  K I  P +V+ L+G+ T   A G   + AV              GK+ +WG G   
Sbjct: 419 DK--KSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 476

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G    
Sbjct: 477 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS--- 524

Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             +  Q GN HA  ++P L+  KL    +EEV CG YH  VLTS  E+YTWG   NG LG
Sbjct: 525 -SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 583

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
            G ++   SP  V+    +  V  ++CG  ++AAI   K L+
Sbjct: 584 HGDVEDRKSPTLVES-LKDKHVKIIACGSNYSAAICLHKSLS 624



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 171/363 (47%), Gaps = 45/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ-ISTGYH 133
           +ACG  H+  +T  G V+  G    G+LG+   +G  + +P  +  L    V  ++ G  
Sbjct: 281 IACGVRHSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEF 338

Query: 134 HSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ A+T+DGELY WG   ++ G LG G   +  +P   ++   L G+     A G   + 
Sbjct: 339 HTCAVTMDGELYTWGDGVHNAGLLGNGTDVSHWMP--KRISGILEGLQVAYVACGPWHTA 396

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            ++  G++ ++G G  G LGHG + SI           PR +  L G++    A G  H+
Sbjct: 397 LISSTGQLFTFGDGTFGVLGHGDKKSI---------SYPREVDSLTGLRTIAVACGVWHT 447

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGG 297
           A + E           +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG 
Sbjct: 448 AAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGH 507

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G+++T GS+  G LG    D    P  V+        ++V+CG  H   + 
Sbjct: 508 SITIGLTTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGESAEEVACGAYHVMVLT 566

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N++
Sbjct: 567 SKNEVYTWGKGAN------------GRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYS 614

Query: 417 GAL 419
            A+
Sbjct: 615 AAI 617



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 95/186 (51%), Gaps = 19/186 (10%)

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
           A G  HSA +   G V+ +G+    ++    G    +P L+  L  +  + V CG +HTC
Sbjct: 282 ACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTC 341

Query: 302 VLTSGGELYTWGS--NENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE 358
            +T  GELYTWG   +  G LG G+ DV H  P+R+ G      V  V+CG  HTA IS 
Sbjct: 342 AVTMDGELYTWGDGVHNAGLLGNGT-DVSHWMPKRISGILEGLQVAYVACGPWHTALISS 400

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            G++ T+G     GTF        G LGHG+     +P  V+    ++ + V+CG  HT 
Sbjct: 401 TGQLFTFG----DGTF--------GVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTA 448

Query: 418 ALLEYV 423
           A++E +
Sbjct: 449 AVVEVI 454



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 131/302 (43%), Gaps = 52/302 (17%)

Query: 142 GELYMWGK--NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++++WG+  + N       +A+ V     + +P  +E    +  +  A G   S  VT 
Sbjct: 234 GDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAIVTR 293

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    GRLG       LG  +  ++  PRL++ L    V + A G  H+  + 
Sbjct: 294 QGEVFTWGEETGGRLG-------LGMGKDVTQ--PRLVEALAATTVDLVACGEFHTCAVT 344

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
            +G +Y +GD   +  L   G       P  IS      ++ Y   V CG +HT +++S 
Sbjct: 345 MDGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAY---VACGPWHTALISST 401

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-------- 358
           G+L+T+G    G LG G    +  P  V        +  V+CG  HTAA+ E        
Sbjct: 402 GQLFTFGDGTFGVLGHGDKKSISYPREVDSLTGLRTI-AVACGVWHTAAVVEVIMTQSST 460

Query: 359 ----GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
               GK+ TWG G  +            +LGHG+    + PT V    +    +++CG +
Sbjct: 461 SIPSGKLFTWGDGDKN------------RLGHGDKEPRLKPTCVPALIDYNFHKIACGHS 508

Query: 415 HT 416
            T
Sbjct: 509 IT 510



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 24/179 (13%)

Query: 254 DENGRVYIFGDRAVDKML----FQEGNHARRPSLISKLPYSEEVV-------CGGYHTCV 302
           D  G ++++G+   D  +     +  N + R  ++   P    +V       CG  H+ +
Sbjct: 231 DALGDIFVWGEVISDNFMKPGADRASNVSSRTDVLLPKPLESNIVLDAQHIACGVRHSAI 290

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
           +T  GE++TWG    G LG+G    +  P  V+   + + VD V+CG  HT A++ +G++
Sbjct: 291 VTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEA-LAATTVDLVACGEFHTCAVTMDGEL 349

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGAL 419
            TWG          DG  + G LG+G DV +  P  I    E ++   V+CG  HT  +
Sbjct: 350 YTWG----------DGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALI 398


>gi|195996231|ref|XP_002107984.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
 gi|190588760|gb|EDV28782.1| hypothetical protein TRIADDRAFT_52018 [Trichoplax adhaerens]
          Length = 347

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 150/326 (46%), Gaps = 23/326 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL----TETGCVYATGLND 99
           G   YG+LGLG  + +  P           K +  GG H++FL     ETG +YA G N+
Sbjct: 31  GANSYGQLGLGHTDDKITPQKMPNL-NFKPKWIGGGGGHSVFLDVYVAETGELYACGWNN 89

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+      ++  L+   L   + +++ G++H+ A++V+G+LY WG N+ GQLG   
Sbjct: 90  NGQLGLEHQ--DNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNAFGQLGHSP 147

Query: 160 -KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +I  PT +E +S         G   + AV   G+  SWGA   G+LG G+   I+
Sbjct: 148 CSRGSIINTPTLIEDISDREFIDTCAGLRHTHAVEACGQTWSWGACKKGQLGIGERMDIV 207

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P LI  L G++VK   AG  HSAC+ E G V+ +G     +    +   +
Sbjct: 208 --------EKPVLISTLRGIRVKKVVAGSYHSACLTECGEVFCWGSNRYGQCTLADKTES 259

Query: 279 RRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             P  IS          ++  G  H   +  GG +Y+WG  + G LG   +    S    
Sbjct: 260 LIPVKISSESCVNKCFIDIHSGWSHVVAVVEGGIVYSWGRCDYGQLGYTELSDGDSKRYQ 319

Query: 335 QGPF---SESPVDQVSCGWKHTAAIS 357
           Q P    +   + Q++CG +H   IS
Sbjct: 320 QEPACVPNLHDLRQIACGSEHNIVIS 345



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 97/229 (42%), Gaps = 25/229 (10%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID----EN 256
           W     G   +GQ    LG   +  + TP+ +  L   K K    G  HS  +D    E 
Sbjct: 25  WSQRQQGANSYGQ----LGLGHTDDKITPQKMPNLN-FKPKWIGGGGGHSVFLDVYVAET 79

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G +Y  G     ++  +  ++  R   +S     ++V CG  HT  L+  G+LY+WGSN 
Sbjct: 80  GELYACGWNNNGQLGLEHQDNVTRLQKLSLPIRMQKVACGWNHTIALSVEGKLYSWGSNA 139

Query: 317 NGCLGIGSI---DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
            G LG        ++++P  ++       +D  + G +HT A+ E    TW WG      
Sbjct: 140 FGQLGHSPCSRGSIINTPTLIEDISDREFIDTCA-GLRHTHAV-EACGQTWSWGA----- 192

Query: 374 SEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGALLE 421
                   GQLG G  +D +  P +++    ++  +V  G  H+  L E
Sbjct: 193 -----CKKGQLGIGERMDIVEKPVLISTLRGIRVKKVVAGSYHSACLTE 236


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 181/456 (39%), Gaps = 101/456 (22%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G G  G LG G   +    P++   F    ++++ACG  H++ + ETG VY  G    GQ
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 103 LGISE-NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMW------------- 147
           LG  E     +L+P+R+ GL+ E VV    GY+H  A+TV G+LY W             
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120

Query: 148 ----------GKNSN----------------GQLG-----------LGKKAAKVIPIPTK 170
                     G NS+                G  G            G       P P  
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           V  L  +   + A G+  S+AVT  G+V SWG     +LG G            ++  P+
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHR---------YNQSVPQ 231

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           L+  L+GV +  A  G  HS  +   G VY FG     ++     +  R P  +  L  +
Sbjct: 232 LVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPA 291

Query: 291 EE-----------VVCGGYHTCVLTSGGELYTWGSNENGCLG---------------IGS 324
           EE           + CG +HT  L   G ++TWGS E G  G                 +
Sbjct: 292 EEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSA 351

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 383
             +  +P  + G F    +  VSCG  H  A + +G + +WGWG            S G 
Sbjct: 352 AMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWG------------SYGV 399

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           LGHGN    + P ++      + +Q + G  H+ A+
Sbjct: 400 LGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 102/238 (42%), Gaps = 38/238 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +  +LGLG   ++  P +    +   + +  CG  H++ L+  G VY  GL  FGQ
Sbjct: 211 WGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQ 270

Query: 103 L--GISENIGYSLEPLRISGLK----------KEVVQISTGYHHSSAITVDGELYMWGKN 150
           L  G+S +  +   P R+  L           + +VQI+ G HH+ A+ V G ++ WG  
Sbjct: 271 LGHGVSSDERF---PRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSA 327

Query: 151 SNGQLG-------------LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGG 196
             GQ G               K AA +   P  +  C  G      + G   ++A    G
Sbjct: 328 EYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDG 387

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            V SWG G  G LGHG     L          P+LI+ + G ++   AAG  HS  ++
Sbjct: 388 SVYSWGWGSYGVLGHGNHRFQL---------VPKLIRRIGGERIVQTAAGAKHSLAVN 436



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 123/276 (44%), Gaps = 46/276 (16%)

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  ++GL+  +VV+++ GY  S A+T  GE+Y WG N   QLGLG +  + +P    V  
Sbjct: 178 PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVP--QLVPH 235

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L G+    A  G + SV ++  G V ++G G  G+LGHG          S+ E  PR ++
Sbjct: 236 LQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGV---------SSDERFPRRVE 286

Query: 234 EL----EGV-----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA------ 278
            L    EGV     ++   A G  H+  +  +G V+ +G     +   Q G +A      
Sbjct: 287 ALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQ---QGGTNAYEDWAT 343

Query: 279 -----RRPSLISKLPYS----------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                +  ++I   P S            V CG  H       G +Y+WG    G LG G
Sbjct: 344 GQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHG 403

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
           +      P+ ++    E  V Q + G KH+ A++ G
Sbjct: 404 NHRFQLVPKLIRRIGGERIV-QTAAGAKHSLAVNAG 438


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 184/397 (46%), Gaps = 49/397 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G  GRLG G       P   ++F  ++ +  +ACG  H+L  +  G VYA G  D G
Sbjct: 1184 WGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRG 1243

Query: 102  QLGISEN-----IGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            QLG  EN     I Y+  P  +  LK+  ++ I+ G  H+  +T + ++  WG    GQL
Sbjct: 1244 QLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQL 1303

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            GL    +K    P  V+ L G    +   G   S A+   GK+L WG    G+LGHG   
Sbjct: 1304 GLDHNLSK--GTPQMVKALDGRAPCKILCGGWHSAAILESGKILLWGKNVYGQLGHGDTK 1361

Query: 216  SILGFLRSTSEYTPRLIK--ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
            S            PR+ +   LEG KV+ A  G  H+  +    +V+  G     ++   
Sbjct: 1362 SC---------SAPRVNQYLRLEG-KVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLD 1411

Query: 274  EGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            + +   +  P  I +L      +V  G  H+  L+  GE+++WG +  G LG  +I    
Sbjct: 1412 DPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSWGGSPFGQLGHETITDKL 1471

Query: 330  SP----ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 384
            +P    ER + P     V  ++CG+  +AA+S +G++ TWG G S            G+L
Sbjct: 1472 APTPLLERHKIP---PDVKSIACGYTFSAAMSAKGEVFTWGNGES------------GEL 1516

Query: 385  GHGNDVDYIHPTIV-NFGENVKALQVSCGFNHTGALL 420
            GH   V    P+++ +F E V   Q++CGF H   ++
Sbjct: 1517 GHAPKVLTYAPSLIKDFSEVV---QIACGFKHMAGIV 1550



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 147/330 (44%), Gaps = 30/330 (9%)

Query: 4   RSLTAMTKYY--LKQDIKLGSKLGICKRWISST--LQRRFAALWGNGDYGRLGLGSLESR 59
           R    +T Y   L ++   G    + KR+I     LQ     +WG+G+ G+LG  S E +
Sbjct: 52  REAALVTDYRTELPEEESEGYDYHMEKRYIRENIELQGSHVFMWGDGENGKLGNQSEEIQ 111

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEP 115
             P +  AF    +K  A G  HTLFL+  G V + G N +GQLG+ +++        EP
Sbjct: 112 HVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEP 171

Query: 116 LRISGLKK---------EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            +   L K          +V I+ GY+HS A+   G+++ WG  S G+LG+G  A     
Sbjct: 172 SKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANA--E 229

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P  V  L        A G   + A+T  G V +WG G  G+LGH              E
Sbjct: 230 SPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKGLRGQLGHKS---------VKEE 280

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           ++PRL   L     +    G  H+  I  +G++Y  G     ++   +      P+L++ 
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
               +  ++   G  +  LT+ G+++ +G+
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGN 370



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 135/279 (48%), Gaps = 23/279 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
            G  ++GRLGLG +     PV   +     +  +ACG  H L LTE   VYA G   +G  
Sbjct: 1668 GGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNA 1727

Query: 104  GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G+S N    LEP  +S L    ++ +  G  HS+A++  G+L+MWGKNSNGQLGLG  +A
Sbjct: 1728 GVS-NTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA 1786

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAV--TGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 PTK+  L G+     +LG   S  +       + + G   +G+LG       LG 
Sbjct: 1787 -AEDSPTKISNLDGVVM-DVSLGANHSAVLMQVTSPNLFTCGLNANGQLG-------LGD 1837

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG----- 275
                S  T   +  L+  ++  A+ G  H+A + + G +  +G+    ++  + G     
Sbjct: 1838 FVDRSTLTA--VDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDI 1895

Query: 276  -NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             N  + P++ +  P   +VVCG   T V++  GELY  G
Sbjct: 1896 ENPVQLPAICND-PMV-KVVCGQEVTIVVSEKGELYMAG 1932



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 34/295 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++MWG   NG+LG   ++ ++  +P  V     +  K  ALG + ++ ++  G VLS G+
Sbjct: 92  VFMWGDGENGKLG--NQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA--------AAGFLHSACIDE 255
              G+LG G         RST    P   K L+ ++  I         AAG+ HS  +++
Sbjct: 150 NVYGQLGMGDHM----LSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALND 205

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            G+++ +G  +  K+      +A  P  ++ L  S+   + CG +HT  +T+ G+++TWG
Sbjct: 206 TGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWG 265

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
               G LG  S+    SP R+     +    ++ CG  HT  I              G  
Sbjct: 266 KGLRGQLGHKSVKEEFSP-RLNASLRKCGAQKIRCGDDHTLVILRS-----------GQL 313

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV------SCGFNHTGALLEY 422
              G ++ GQLG G+  D I PT+V    N K + +      S    +TG +  +
Sbjct: 314 YSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAF 368



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 127/278 (45%), Gaps = 15/278 (5%)

Query: 27   CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
            C RW + TL      L WG G++G+LGL    S+  P +  A +  +   + CGG H+  
Sbjct: 1278 CGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAA 1337

Query: 86   LTETGCVYATGLNDFGQLGISENIGYSL----EPLRISGLKKEVVQISTGYHHSSAITVD 141
            + E+G +   G N +GQLG  +    S     + LR+ G   +V     G +H+  + V 
Sbjct: 1338 ILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEG---KVRTAGLGANHTLVVMVA 1394

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
             +++  G N +GQLGL   +     +P  +E L+G    Q A G + S+A++  G+V SW
Sbjct: 1395 NKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVFGEVWSW 1454

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G    G+LGH   +  L         TP L +      VK  A G+  SA +   G V+ 
Sbjct: 1455 GGSPFGQLGHETITDKLA-------PTPLLERHKIPPDVKSIACGYTFSAAMSAKGEVFT 1507

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
            +G+    ++          PSLI       ++ CG  H
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKH 1545



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 15/294 (5%)

Query: 43  WGNGDYGRLGLG-----SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +G G +GRLG G     S ES   P       K S+  +ACG   T  LT+TG VY  G 
Sbjct: 520 YGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK 579

Query: 98  NDFGQLGISENIGYSL-EPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQL 155
           +  G+LG+      ++  P  +  L   VV QIS G +H++  T   + ++WG N+ GQL
Sbjct: 580 SAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQL 639

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G+    +  +P P ++  L     +  A G   ++  T  G V+S G G  G+LGHG   
Sbjct: 640 GI-PHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYE 698

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           S+   L  T  Y  ++++      +   +AG   SA I   GR++ +G +  +  L  E 
Sbjct: 699 SLTA-LSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWG-KGDEYQLGHES 756

Query: 276 N----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +    + R     +K+    +V  G  H   L   G  Y+WG+   G LG G +
Sbjct: 757 SKNEAYPREVEFFAKIRVV-DVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEM 809



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 164/391 (41%), Gaps = 38/391 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT---LFLTETGCVYATGLND 99
            WGNG+ G LG       + P +   F +  +  +ACG  H    +F      +  TG ++
Sbjct: 1508 WGNGESGELGHAPKVLTYAPSLIKDFSE--VVQIACGFKHMAGIVFKPRMKTIELTGSSN 1565

Query: 100  FGQLGISENIGYSLEPLRISG----LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
             G    S     S+    +SG             T    +S     G +++WG+++ GQL
Sbjct: 1566 IGD--NSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQL 1623

Query: 156  GL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            G+ G +AA+    P+ ++ L        +   + S  VT  G +   G    GRLG G  
Sbjct: 1624 GIRGLQAARS---PSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRLGLGHM 1680

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            +            TP  I+ L  VK+   A G  H   + E  RVY +GD          
Sbjct: 1681 AP---------APTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSN 1731

Query: 275  GNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SP 331
             N    P  +S L       V  GG+H+  L+  G+L+ WG N NG LG+G+      SP
Sbjct: 1732 TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSP 1791

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             ++     +  V  VS G  H+A + +          S   F+  G ++ GQLG G+ VD
Sbjct: 1792 TKISN--LDGVVMDVSLGANHSAVLMQVT--------SPNLFT-CGLNANGQLGLGDFVD 1840

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
                T V+  ++ + +  SCG  HT A+ +Y
Sbjct: 1841 RSTLTAVDALDDRQIVSASCGAAHTAAVSQY 1871



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 143/294 (48%), Gaps = 35/294 (11%)

Query: 141 DGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           DG +Y +GK   G+LG G    ++ + +  P ++E L+ +     A G + + A+T  GK
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V +WG    G+LG       LG  +  +   P+L+++L    V   + G  H+AC  +  
Sbjct: 574 VYTWGKSAQGKLG-------LGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMH 626

Query: 258 RVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           + +++G     ++ +    ++   P  I+ L  +    + CGG+HT + T+ G + + G 
Sbjct: 627 KFFVWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 315 NENGCLGIGSIDVLHSPER--------VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
             +G LG G  + L +  +        V+G F +S + +VS G + +AAI+ +G++ TWG
Sbjct: 687 GWHGQLGHGDYESLTALSKTLPYFKKIVEG-FGDSFIVKVSAGKESSAAITNKGRLFTWG 745

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G  +            QLGH +  +  +P  V F   ++ + VS G +H  AL
Sbjct: 746 KGDEY------------QLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLAL 787



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 161/340 (47%), Gaps = 28/340 (8%)

Query: 31   ISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTE 88
             S++ Q+R   +  WG    G+LG+  L++   P +  +    S+  ++     + F+T+
Sbjct: 1601 FSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTD 1660

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G +Y +G ++ G+LG+  ++  +  P+ I  L   ++++++ G +H  A+T +  +Y W
Sbjct: 1661 SGSLYVSGGSEHGRLGLG-HMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            G    G  G+       +  P ++  L+         G   S A++  G +  WG   +G
Sbjct: 1720 GDGKWGNAGVSN--TNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNG 1777

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE--NGRVYIFGDR 265
            +LG G  S+        +E +P  I  L+GV + + + G  HSA + +  +  ++  G  
Sbjct: 1778 QLGLGTTSA--------AEDSPTKISNLDGVVMDV-SLGANHSAVLMQVTSPNLFTCGLN 1828

Query: 266  AVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
            A  ++    G+   R +L +     +  +    CG  HT  ++  G+L TWG+  NG LG
Sbjct: 1829 ANGQLGL--GDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLG 1886

Query: 322  I--GSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
            +  G    + +P  VQ P     P+ +V CG + T  +SE
Sbjct: 1887 LKAGLSKDIENP--VQLPAICNDPMVKVVCGQEVTIVVSE 1924



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 26/289 (8%)

Query: 92  VYATGLNDFGQLG-ISENIGYSLEPLRISGLKKEVVQI-STGYHHSSAITVDGELYMWGK 149
           V+  G  + G+LG  SE I +   P  +   +  +V++ + G  H+  ++ DG +   G 
Sbjct: 92  VFMWGDGENGKLGNQSEEIQHV--PYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 150 NSNGQLGLGKKA-AKVIPI--PTKVECLSGIFTKQAAL--------GFEQSVAVTGGGKV 198
           N  GQLG+G    ++  P+  P+K + L  +     +L        G+  S+A+   GK+
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            SWG+G  G+LG G +++           +PR +  L+  KV   A G  H+A I   G 
Sbjct: 210 FSWGSGSWGKLGIGSDAN---------AESPRFVASLQNSKVVHIACGAHHTAAITTVGD 260

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ +G     ++  +       P L + L    ++++ CG  HT V+   G+LY+ G+N 
Sbjct: 261 VWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANT 320

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
           +G LG+G       P  V G  +E  +D  + G +  A  + GK+  +G
Sbjct: 321 HGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFG 369



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 17/205 (8%)

Query: 18  IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW-RPVVCSAFEKHSLKAL 76
           I LG     C    S+ + + F  +WG+  +G+LG+  + S    P   ++  + +++++
Sbjct: 612 ISLGRNHAAC----STDMHKFF--VWGSNTFGQLGIPHISSYMPDPYEITSLREANIRSI 665

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV--------VQI 128
           ACGG HTL  T TG V + G    GQLG  +    +     +   KK V        V++
Sbjct: 666 ACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKV 725

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G   S+AIT  G L+ WGK    QLG   +++K    P +VE  + I     ++G   
Sbjct: 726 SAGKESSAAITNKGRLFTWGKGDEYQLG--HESSKNEAYPREVEFFAKIRVVDVSIGDSH 783

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQ 213
            +A+   G   SWG G +G+LGHG+
Sbjct: 784 MLALDYSGLPYSWGNGSAGQLGHGE 808



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 49/332 (14%)

Query: 44  GNGDYGRLGLGS-LESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
           G+  YG+LG+G  + SR  PV   + +K            +++  +A G  H+L L +TG
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTG 207

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            +++ G   +G+LGI  +          S    +VV I+ G HH++AIT  G+++ WGK 
Sbjct: 208 KIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWTWGKG 267

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQ  LG K+ K    P     L     ++   G + ++ +   G++ S GA   G+LG
Sbjct: 268 LRGQ--LGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLG 325

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G          +T    P L+      KV    A    S  +   G+V+ FG+      
Sbjct: 326 LGD---------ATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNET---- 372

Query: 271 LFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTW---GSNENGCLGIGS 324
              E +  R P  ++ LP S+ ++      +    ++  G+L+ W    S E       S
Sbjct: 373 ---EPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFSSEEE------S 423

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             +L S   ++G      V ++ CG  H A I
Sbjct: 424 SRMLESFHAIKG------VVRMFCGHNHMAVI 449



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 131/315 (41%), Gaps = 39/315 (12%)

Query: 90  GCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQISTGYHHSSAITVDGEL 144
           G +Y  G   FG+LG       S E    P RI  L K  VV I+ G   ++A+T  G++
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y WGK++ G+LGLG      I +P  V+ LS     Q +LG   +   T   K   WG+ 
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGSN 634

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG    SS +          P  I  L    ++  A G  H+      G V   G 
Sbjct: 635 TFGQLGIPHISSYMP--------DPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV------------CGGYHTCVLTSGGELYTW 312
               ++    G++    +L   LPY +++V             G   +  +T+ G L+TW
Sbjct: 687 GWHGQL--GHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTW 744

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           G  +   LG  S      P  V+  F++  V  VS G  H  A+     L + W      
Sbjct: 745 GKGDEYQLGHESSKNEAYPREVEF-FAKIRVVDVSIGDSHMLALDYSG-LPYSW------ 796

Query: 373 FSEDGHSSGGQLGHG 387
               G+ S GQLGHG
Sbjct: 797 ----GNGSAGQLGHG 807



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 25/284 (8%)

Query: 31   ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
            ++ T ++R  A WG+G +G  G+ +      P   S+    S+  +  GG H+  L++ G
Sbjct: 1708 LALTEEKRVYA-WGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAALSQYG 1766

Query: 91   CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI--TVDGELYMWG 148
             ++  G N  GQLG+         P +IS L   V+ +S G +HS+ +       L+  G
Sbjct: 1767 DLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAVLMQVTSPNLFTCG 1826

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             N+NGQLGLG    +     T V+ L       A+ G   + AV+  G +++WG G +G+
Sbjct: 1827 LNANGQLGLGDFVDR--STLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQ 1884

Query: 209  LG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            LG   G    I   ++  +     ++K + G +V I          + E G +Y+ G   
Sbjct: 1885 LGLKAGLSKDIENPVQLPAICNDPMVKVVCGQEVTIV---------VSEKGELYMAG--- 1932

Query: 267  VDKMLFQEGNHARRPSL------ISKLPYSEEVVCGGYHTCVLT 304
             +  +   GN +RR         +  L    ++  G  H   L 
Sbjct: 1933 YESTIGLGGNSSRRREFDVSFREVEGLIQPTQIAVGSVHVLALV 1976



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 99/242 (40%), Gaps = 38/242 (15%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           G  V  WG G +G+LG+  E           ++ P ++     V VK+ A G  H+  + 
Sbjct: 89  GSHVFMWGDGENGKLGNQSEEI---------QHVPYIVPAFRNVLVKVCALGKQHTLFLS 139

Query: 255 ENGRVY-----IFGDRAVDKMLFQEGNHARRPS----------LISKLPYSEEVVCGGYH 299
            +G V      ++G   +   +         PS          +I  L     +  G YH
Sbjct: 140 ADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYH 199

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
           +  L   G++++WGS   G LGIGS     SP R       S V  ++CG  HTAAI+  
Sbjct: 200 SLALNDTGKIFSWGSGSWGKLGIGSDANAESP-RFVASLQNSKVVHIACGAHHTAAITTV 258

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G + TWG G              GQLGH +  +   P +        A ++ CG +HT  
Sbjct: 259 GDVWTWGKGLR------------GQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLV 306

Query: 419 LL 420
           +L
Sbjct: 307 IL 308



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 93/397 (23%), Positives = 159/397 (40%), Gaps = 62/397 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG  S++  + P + ++  K   + + CG  HTL +  +G +Y+ G N  GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +     + P  ++G   E V+ I      S A+T  G+++ +G  +   L    + 
Sbjct: 324 LGLGDATDRII-PTLVTGFANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNRIPRF 382

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              +P   K + +  +  + A   F    A++  G++  W                    
Sbjct: 383 VAGLP---KSDLIIAV-ARTAHFDF----AISDTGQLFRWRP------------------ 416

Query: 222 RSTSEYTPRLIKELEGVK-VKIAAAGFLHSA--CIDENGRVYIFGDRAVDKMLFQEGNHA 278
            S+ E + R+++    +K V     G  H A  C  E G       R        + + A
Sbjct: 417 FSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISRA 476

Query: 279 R---------RPSLISKLPYSEEVVCGGYHTCVLTSG-GELYTWGSNENGCLGIGSIDVL 328
                      P+L +   Y +E             G G +YT+G    G LG G ++  
Sbjct: 477 SLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGHG-VEYT 535

Query: 329 HSPERVQGP-----FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 382
            S E V+ P      ++  V  ++CG   TAA+++ GK+ TW            G S+ G
Sbjct: 536 RSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTW------------GKSAQG 583

Query: 383 Q--LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           +  LG G  +  + P +V    +    Q+S G NH  
Sbjct: 584 KLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAA 620



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 98/237 (41%), Gaps = 31/237 (13%)

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFL 248
            V + G   + +WG G +GRLGHG           T   TP+ I       K+   A G  
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFH---------TGYSTPQEITSFPSNTKIVEVACGCE 1223

Query: 249  HSACIDENGRVYIFG--DR----AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHT 300
            HS     +G VY +G  DR    +++     + N+A  P  +  L   +   + CG +H 
Sbjct: 1224 HSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHN 1283

Query: 301  CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
              LTS  ++ +WG+ E G LG+       +P+ V+     +P   +  GW   A +  GK
Sbjct: 1284 MTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILESGK 1343

Query: 361  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE-NVKALQVSCGFNHT 416
            IL W            G +  GQLGHG+      P +  +     K      G NHT
Sbjct: 1344 ILLW------------GKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHT 1388



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 110/263 (41%), Gaps = 28/263 (10%)

Query: 108  NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLGLG-----KK 160
            NIG  L+ L     KK   QI    +    + ++GE  +Y WG   NG+LG G       
Sbjct: 1143 NIGRILQCLVRYSEKKHFEQIRDRANKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYST 1202

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              ++   P+  + +      + A G E S+A +  G V +WGAG  G+LG     S+  F
Sbjct: 1203 PQEITSFPSNTKIV------EVACGCEHSLARSFDGGVYAWGAGDRGQLG-----SLENF 1251

Query: 221  --LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
              ++    + P+ +  L+   +   A G  H+  +    +V       FG   +D  L  
Sbjct: 1252 DCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNL-S 1310

Query: 274  EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +G      +L  + P   +++CGG+H+  +   G++  WG N  G LG G      +P  
Sbjct: 1311 KGTPQMVKALDGRAPC--KILCGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRV 1368

Query: 334  VQGPFSESPVDQVSCGWKHTAAI 356
             Q    E  V     G  HT  +
Sbjct: 1369 NQYLRLEGKVRTAGLGANHTLVV 1391



 Score = 47.4 bits (111), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 29/154 (18%)

Query: 281  PSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQG 336
            P  I+  P +    EV CG  H+   +  G +Y WG+ + G LG + + D +    ++  
Sbjct: 1203 PQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCV----KINY 1258

Query: 337  PFSESPVDQ--------VSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             F+  PV          ++CG W +    SE ++L+WG G              GQLG  
Sbjct: 1259 AFNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAG------------EFGQLGLD 1306

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +++    P +V   +     ++ CG  H+ A+LE
Sbjct: 1307 HNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 155/305 (50%), Gaps = 20/305 (6%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           L+  A G  H+L L   G V++ G N  GQLG    +    +P  I  L+   V+ +S G
Sbjct: 36  LRQAASGERHSLLLLSDGAVHSCGDNSRGQLG-RRGLQREEQPKPIQALETLRVELVSCG 94

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IP K++ L+GI   Q + G   S+A
Sbjct: 95  KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FKEINLIPQKIKTLTGIKIIQVSCGNYHSLA 153

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 154 LSEDGQVFSWGSNSHGQLGLGKELP--------SQASPQRVRSLDGIPLAQVAAGGAHSF 205

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSG 306
            +  +G  + +G     ++ F   N    + +P  +S L       + CG  HT VLT  
Sbjct: 206 ALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
           G+++T+G N  G LG         P+ ++G   E  V Q+ CG  HT A   + G+++++
Sbjct: 266 GKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTGQVVSF 323

Query: 365 GWGGS 369
           G G S
Sbjct: 324 GRGPS 328



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG   L+   +P    A E   ++ ++CG  H+L +   G V+A G    GQL
Sbjct: 59  GDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQL 118

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +L P +I  L   +++Q+S G +HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 119 GIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELP 178

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      +  G   
Sbjct: 179 SQAS-PQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------AFFGSNV 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y PR +  L+ + V   + G  H+A + +NG+V+ FGD +  ++          P 
Sbjct: 232 PVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQ 291

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     ++ CG YHT   + + G++ ++G
Sbjct: 292 LMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 148/308 (48%), Gaps = 43/308 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  DG ++  G NS GQ  LG++  +    P  ++ L  +  +  +
Sbjct: 35  ELRQAASGERHSLLLLSDGAVHSCGDNSRGQ--LGRRGLQREEQPKPIQALETLRVELVS 92

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I           P+ IK L G+K+   
Sbjct: 93  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEI--------NLIPQKIKTLTGIKIIQV 144

Query: 244 AAGFLHSACIDENGRVYIFGDRA-----VDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
           + G  HS  + E+G+V+ +G  +     + K L  + +  R  SL   +P + +V  GG 
Sbjct: 145 SCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRSL-DGIPLA-QVAAGGA 202

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHT 353
           H+  L+  G  + WGSN  G L     +V   P +   P S S +       +SCG +HT
Sbjct: 203 HSFALSLSGTSFGWGSNNAGQLAFFGSNV---PVQSYKPRSVSALKTLGVVYISCGHEHT 259

Query: 354 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVS 410
           A +++ GK+ T+            G +S GQLGH    +   P ++   E ++ L  Q+ 
Sbjct: 260 AVLTQNGKVFTF------------GDNSCGQLGHSPTAEKTGPQLM---EGIEGLVSQID 304

Query: 411 CGFNHTGA 418
           CG  HT A
Sbjct: 305 CGSYHTLA 312



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 16/231 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P          +  ++CG  H+L L+E G V++ 
Sbjct: 106 RVFA--WGAGSEGQLGIGEFKEINLIPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSW 163

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L    + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 164 GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 223

Query: 155 LG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L   G         P  V  L  +     + G E +  +T  GKV ++G    G+LGH  
Sbjct: 224 LAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS- 282

Query: 214 ESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     T+E T P+L++ +EG+  +I    +   A +   G+V  FG
Sbjct: 283 ---------PTAEKTGPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 324



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 32/251 (12%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G V S G    G+LG        G  R   E  P+ I+ LE ++
Sbjct: 37  RQAASGERHSLLLLSDGAVHSCGDNSRGQLGRR------GLQR---EEQPKPIQALETLR 87

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V++ + G  HS  +   GRV+ +G  +  ++    F+E N    P  I  L   +  +V 
Sbjct: 88  VELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLI--PQKIKTLTGIKIIQVS 145

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG YH+  L+  G++++WGSN +G LG+G  +    SP+RV+      P+ QV+ G  H+
Sbjct: 146 CGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRS-LDGIPLAQVAAGGAHS 204

Query: 354 AAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVS 410
            A+S     ++GWG ++           GQL   G    V    P  V+  + +  + +S
Sbjct: 205 FALSLSGT-SFGWGSNN----------AGQLAFFGSNVPVQSYKPRSVSALKTLGVVYIS 253

Query: 411 CGFNHTGALLE 421
           CG  HT  L +
Sbjct: 254 CGHEHTAVLTQ 264



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 6/170 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  +G+LGLG  L S+  P    + +   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 163 WGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 222

Query: 102 QLGI--SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL    S     S +P  +S LK   VV IS G+ H++ +T +G+++ +G NS GQLG  
Sbjct: 223 QLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHS 282

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             A K    P  +E + G+ ++     +     V   G+V+S+G G S +
Sbjct: 283 PTAEKT--GPQLMEGIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRGPSCK 330



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 90/188 (47%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G +++ AA+G  HS  +  +G V+  GD +  ++  +      +P  I  L     E V 
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG    ++  P++++   +   + QVSCG  H+
Sbjct: 93  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKT-LTGIKIIQVSCGNYHS 151

Query: 354 AAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+SE G++ +W            G +S GQLG G ++     P  V   + +   QV+ 
Sbjct: 152 LALSEDGQVFSW------------GSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAA 199

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 200 GGAHSFAL 207


>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           impatiens]
          Length = 539

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 141/289 (48%), Gaps = 28/289 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           GN  YG LG G  +S   P    A    S+K  A G G H L LTE G VY+ G ND+ +
Sbjct: 52  GNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111

Query: 103 LGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG +++    L P  +  +   K VV I+ G HHS A+T  GE+Y WG N +GQ+G G  
Sbjct: 112 LG-NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTI 170

Query: 161 AAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + V PIP  +   L+G      + G   SVAVT  G+V SWG  G G+LG G       
Sbjct: 171 LSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLG------- 223

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               TS+  P+ +     + ++    G++H+  + + G +Y++G  +  ++     ++  
Sbjct: 224 --NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVW 281

Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
            P   +KL   E     ++V   YH  +  ++ G  ++ WG     CLG
Sbjct: 282 IP---TKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ----CLG 323



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 18/291 (6%)

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
           TL +T+   VY  G N +G LG  +    ++ P +I  L  K V   + G   H  A+T 
Sbjct: 39  TLLVTKDDMVYGIGNNTYGCLGTGDTQS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVL 199
           +G++Y WG N   +LG   K+      PT V   L   F    A G   S+A+T  G++ 
Sbjct: 98  EGKVYSWGYNDYCELG--NKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTNKGEIY 155

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGR 258
           +WG   SG++G        G + ST +  P+L+   L G KV   + G   S  + ++G 
Sbjct: 156 AWGHNVSGQVG-------CGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGE 208

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           VY +G   V ++          P  ++       E+VVCG  HT  L+  G LY WG+N 
Sbjct: 209 VYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANS 268

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEG-KILTWG 365
            G LG+ +   +  P +++ P     +D V+  + H + A+SEG +I  WG
Sbjct: 269 YGQLGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 141/325 (43%), Gaps = 53/325 (16%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           LEP  IS ++  +V      + +  +T D  +Y  G N+ G LG G   + + P   K+E
Sbjct: 18  LEPKFISNVRMAIVY-GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYP--KKIE 74

Query: 173 CLSGIFTKQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE-YTPR 230
            L G   K  A G     +A+T  GKV SWG      LG+          +ST+E  TP 
Sbjct: 75  ALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGN----------KSTNEGLTPT 124

Query: 231 LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFGDRAVDKM--------------LFQE 274
           L+  +   K  V IA  G  HS  +   G +Y +G     ++              L   
Sbjct: 125 LVPSVLDDKFVVDIACGGH-HSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNV 183

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           G + ++   IS         CG   +  +T  GE+Y+WG N  G LG+G+      P++V
Sbjct: 184 GLNGKKVVHIS---------CGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKV 234

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
              F++  +++V CG+ HT A+S+  +L + WG           +S GQLG   D +   
Sbjct: 235 -ATFAKIVIEKVVCGYMHTLALSDEGVL-YVWGA----------NSYGQLGLNTDSNVWI 282

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           PT +   E  + L +     H  +L
Sbjct: 283 PTKLEVPEMGRILDIVTSHYHHISL 307



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 5/164 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G++G G++ S  +P+   +        +  ++CG + ++ +T++G VY+ G N 
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNG 216

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG+  N    +EP +++   K V++ +  GY H+ A++ +G LY+WG NS GQLGL 
Sbjct: 217 VGQLGLG-NCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLN 275

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             +   IP   +V  +  I     +     S+A++ G ++  WG
Sbjct: 276 TDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWG 319



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LGLG+  S+  P   + F K  ++ + CG  HTL L++ G +Y  G N +GQ
Sbjct: 212 WGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQ 271

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
           LG++ +    +   L +  + + +  +++ YHH S A++    ++MWG+       LG+ 
Sbjct: 272 LGLNTDSNVWIPTKLEVPEMGRILDIVTSHYHHISLAMSEGNRIFMWGQ------CLGQS 325

Query: 161 AAKVIPIPTKVECL 174
               +P  T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 179/396 (45%), Gaps = 38/396 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E R       A E  ++ ++  G  ++L +TE G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G +   S   P  ++ L+   V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P++VQ   S   + Q+SCG  H+ A+ S+G++ ++G  G HG     G+      G   
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRKVTTGQPE 347

Query: 389 DVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 422
           +V    P      EN    A  V+CG  HT AL+++
Sbjct: 348 EVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 138/336 (41%), Gaps = 30/336 (8%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            + A G  + GQLG+  N          +   + V  +  G  +S AIT DG+L+ WG N
Sbjct: 6   AIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65

Query: 151 SNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             G LG   G K+  V   P++V+ LS +   QAA+G    +AV   G+  +WG    G+
Sbjct: 66  QRGTLGHPAGTKSENV---PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122

Query: 209 LGHGQESSILGFLRSTSEYTPR---LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFG 263
            G   E       +  +   PR    I +    K  V+  AAG  HS  +   G V+ +G
Sbjct: 123 CGEEPEK------KDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                  + Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G
Sbjct: 177 QPWPPGDITQ----ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                  P  VQG    + VD  + GW  TA    G++  WG  G HG            
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG-RGEHGRLG--------- 282

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G  +    + P  V      + +Q+SCG  H+ A+
Sbjct: 283 FGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAV 318


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 179/396 (45%), Gaps = 38/396 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E R       A E  ++ ++  G  ++L +TE G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEK 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDNTGRPPRRDIAIPQR--CAPKLIVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G +   S   P  ++ L+   V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDITQIS--VPVRVQGLD--MVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P++VQ   S   + Q+SCG  H+ A+ S+G++ ++G  G HG     G+      G   
Sbjct: 293 VPQKVQ-LLSGEEIVQISCGGTHSVAVTSDGRMFSFG-RGDHGRL---GYGRKVTTGQPE 347

Query: 389 DVDYIHPTIVNFGENVK--ALQVSCGFNHTGALLEY 422
           +V    P      EN    A  V+CG  HT AL+++
Sbjct: 348 EVPIDIPPPRGRTENGHWIAKLVACGGRHTLALVQW 383



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 138/336 (41%), Gaps = 30/336 (8%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            + A G  + GQLG+  N          +   + V  +  G  +S AIT DG+L+ WG N
Sbjct: 6   AIIAWGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWN 65

Query: 151 SNGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             G LG   G K+  V   P++V+ LS +   QAA+G    +AV   G+  +WG    G+
Sbjct: 66  QRGTLGHPAGTKSENV---PSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQ 122

Query: 209 LGHGQESSILGFLRSTSEYTPR---LIKELEGVK--VKIAAAGFLHSACIDENGRVYIFG 263
            G   E       +  +   PR    I +    K  V+  AAG  HS  +   G V+ +G
Sbjct: 123 CGEEPEK------KDNTGRPPRRDIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWG 176

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                  + Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G
Sbjct: 177 QPWPPGDITQ----ISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                  P  VQG    + VD  + GW  TA    G++  WG  G HG            
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWG-RGEHGRLG--------- 282

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G  +    + P  V      + +Q+SCG  H+ A+
Sbjct: 283 FGDNDKSSKMVPQKVQLLSGEEIVQISCGGTHSVAV 318


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 23/324 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S  +R  PV  S      + A+A G  HT+ L   G V+A G N+ GQ
Sbjct: 167 WGANWNGQLGDESTTNRSTPVQVSGLTD--VIAIAGGAYHTIALKSDGTVWAWGNNEGGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++SGL  +V+ I+ GY H+ A+  DG ++ WG N  G+LG G    
Sbjct: 225 LGDGSTTDRS-TPVQVSGL-TDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTN 282

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + IP+  KV  LS +     A G   ++A+   G V +WG    G+LG G          
Sbjct: 283 RSIPV--KVGGLSDVI--AIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGS--------- 329

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   A G+ H+  +  +G V+ +G     ++      +   P 
Sbjct: 330 TTNRSTPVKVSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPV 387

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  G YHT  + S G ++ WG N  G LG G+     +P +V G    + 
Sbjct: 388 QVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNG---LTD 444

Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
           V  ++ G+ HT A+ S+G + TWG
Sbjct: 445 VIAIAGGYYHTIAMKSDGAVWTWG 468



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 162/345 (46%), Gaps = 35/345 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  HTL L   G V+  G N  GQLG  E+      P+++SGL  +V+ I+ G +H+
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLG-DESTTNRSTPVQVSGLT-DVIAIAGGAYHT 205

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G    +  P+  +V  L+ +     A G+  ++A+   
Sbjct: 206 IALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV--QVSGLTDVI--AIAGGYAHTIALKSD 261

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    GRLG G          +T+   P  +  L    V   A G  H+  +  
Sbjct: 262 GTVWAWGDNEGGRLGDGS---------TTNRSIPVKVGGLS--DVIAIAGGNAHTIALKS 310

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V+ +GD    ++      +   P  +S L     +  G  HT VL S G ++TWG N
Sbjct: 311 DGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDGTVWTWGHN 370

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
           E G LG GS     +P +V G    + V  ++ G  HT A+ S+G +  W          
Sbjct: 371 EGGQLGDGSTTNRSTPVQVSG---LADVIAIAGGVYHTIAVKSDGTMWAW---------- 417

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G++  GQLG G  ++   P  VN   +V A  ++ G+ HT A+
Sbjct: 418 --GYNWYGQLGDGTTINSSTPVQVNGLTDVIA--IAGGYYHTIAM 458



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 162/345 (46%), Gaps = 35/345 (10%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
            ++ G  HTL L   G V+A G N  GQLG    I  S  P+++SGL  +V+ I+ G +H+
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS-TPVQVSGLT-DVIAIAGGDYHT 1101

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
             A+  D  ++ WG NS GQLG G    + IP P  V  L+ I     A G+  ++A+   
Sbjct: 1102 IALKSDNTVWAWGSNSYGQLGDGTITNRSIPTP--VTYLTNII--AIAGGYVHTIALKSD 1157

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG-FLHSACID 254
            G V +WG  G G+LG G          +T+  TP  +  L  V   IA AG ++H+  + 
Sbjct: 1158 GTVWAWGYNGYGQLGDGS---------TTNRSTPVQVSGLTDV---IAIAGEYVHTVALK 1205

Query: 255  ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
             +G V+ +G     ++      +   P  +S L     +  G  HT  L S G ++TWG 
Sbjct: 1206 SDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGGYVHTIALKSDGTVWTWGW 1265

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
            N +G LG G+     +P +V G    +    ++ G  HT A+     + W W        
Sbjct: 1266 NNSGQLGDGTTINRLTPVQVSG---LTDAIAIAGGDYHTIALKSDNTV-WAW-------- 1313

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G +S GQLG G  ++ + P  V       A+ ++ G  HT AL
Sbjct: 1314 --GSNSYGQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1354



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 154/322 (47%), Gaps = 23/322 (7%)

Query: 50  RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI 109
           +LG GS      PV  S        A+A G  HT+ L   G V+  G N+ GQLG    I
Sbjct: 622 QLGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTI 679

Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
             S  P+++ GL  +V+ I+ G +H+ A+  DG ++ WG N  GQLG G    +  P+  
Sbjct: 680 NRS-TPVQVIGLT-DVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPV-- 735

Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
           +V+ L+ I     A G+  S+A+   G V +WG  G G+LG G          +T   TP
Sbjct: 736 QVKGLADII--AIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGS---------TTDHLTP 784

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
             +  L    +   A G++H+  +  +G V+ +G     ++      ++  P  +S L  
Sbjct: 785 VQVSGL--TDIIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTPVQVSGLTD 842

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              V    YHT  L S G ++TWG N  G LG GS      P +V G    + V  ++ G
Sbjct: 843 VIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPVQVIG---LTDVIAIAGG 899

Query: 350 WKHTAAI-SEGKILTWGWGGSH 370
           + HT A+ S+G +  WG+ G++
Sbjct: 900 YYHTIALKSDGAVWAWGYNGNN 921



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 139/291 (47%), Gaps = 19/291 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN + G+LG GS   R  PV  S      + A+A G AHT+ L   G V+A G N+ G+
Sbjct: 217 WGNNEGGQLGDGSTTDRSTPVQVSGLTD--VIAIAGGYAHTIALKSDGTVWAWGDNEGGR 274

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+++ GL  +V+ I+ G  H+ A+  DG ++ WG N  GQLG G    
Sbjct: 275 LGDGSTTNRSI-PVKVGGLS-DVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTN 332

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  KV  L+ +     A G+  ++ +   G V +WG    G+LG G          
Sbjct: 333 RSTPV--KVSGLADVI--AIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGS--------- 379

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V   A G  H+  +  +G ++ +G     ++      ++  P 
Sbjct: 380 TTNRSTPVQVSGLA--DVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPV 437

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            ++ L     +  G YHT  + S G ++TWG N  G LG GSI    +P +
Sbjct: 438 QVNGLTDVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQ 488



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 25/282 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  YG+LG G++ +R  P   +      + A+A G  HT+ L   G V+A G N +GQ
Sbjct: 1113 WGSNSYGQLGDGTITNRSIPTPVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQ 1170

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       S  P+++SGL  +V+ I+  Y H+ A+  DG ++ WG N  GQLG G    
Sbjct: 1171 LGDGSTTNRS-TPVQVSGLT-DVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGSTTN 1228

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +  P+  +V  L+ +     A G+  ++A+   G V +WG   SG+LG G          
Sbjct: 1229 RSTPV--QVSGLTDVI--AIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGT--------- 1275

Query: 223  STSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            + +  TP    ++ G+   IA A G  H+  +  +  V+ +G  +  ++   +G    R 
Sbjct: 1276 TINRLTP---VQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL--GDGTTINRL 1330

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             P  +S L  +  +  G YHT  L S   ++ WGSN  G LG
Sbjct: 1331 TPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLG 1372



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 159/350 (45%), Gaps = 39/350 (11%)

Query: 49   GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
            G+LG G+  +R  PV  S      + A+A G  HT+ L     V+A G N +GQLG    
Sbjct: 1069 GQLGDGTTINRSTPVQVSGLTD--VIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTI 1126

Query: 109  IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
               S+ P  ++ L   ++ I+ GY H+ A+  DG ++ WG N  GQLG G    +  P+ 
Sbjct: 1127 TNRSI-PTPVTYL-TNIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQ 1184

Query: 169  TKVECLSGIFTKQAALG-FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
                 +SG+    A  G +  +VA+   G V +WG  G G+LG G          +T+  
Sbjct: 1185 -----VSGLTDVIAIAGEYVHTVALKSDGTVWAWGYNGYGQLGDGS---------TTNRS 1230

Query: 228  TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS 285
            TP  +  L    V   A G++H+  +  +G V+ +G     ++   +G    R  P  +S
Sbjct: 1231 TPVQVSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQL--GDGTTINRLTPVQVS 1286

Query: 286  KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
             L  +  +  G YHT  L S   ++ WGSN  G LG G+     +P +V G    +    
Sbjct: 1287 GLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQVSG---LTDAIA 1343

Query: 346  VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
            ++ G  HT A+     + W W          G +S GQLG  +  + + P
Sbjct: 1344 IAGGDYHTIALKSDNTV-WAW----------GSNSYGQLGDVSTANSLTP 1382



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 159/345 (46%), Gaps = 35/345 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  HTL L   G V+A G N   QLG       S  P+++SGL  + + I+ G +H+
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSS-TPVQVSGL-TDAIAIAGGVYHT 653

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N++GQLG G    +  P+  +V  L+ +     A G   ++A+   
Sbjct: 654 IALKSDGTVWTWGWNNSGQLGDGTTINRSTPV--QVIGLTDVI--AIAGGDYHTIALKSD 709

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G          +T+  TP  +K L    +   A G++HS  +  
Sbjct: 710 GTVWTWGFNYYGQLGGGA---------TTNRSTPVQVKGLA--DIIAIAGGYVHSIALKS 758

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V+ +G     ++          P  +S L     +  G  HT  L S G ++ WG N
Sbjct: 759 DGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDIIAIAGGYIHTIALKSDGTVWAWGHN 818

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
           E G LG G+     +P +V G    + V  V+    HT A+ S+G + TW          
Sbjct: 819 EGGQLGDGTTTNSSTPVQVSG---LTDVIAVTARLYHTIALKSDGTVWTW---------- 865

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G +  GQLG G+  +   P  V    +V A  ++ G+ HT AL
Sbjct: 866 --GRNIYGQLGDGSTTERSLPVQVIGLTDVIA--IAGGYYHTIAL 906



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 192/450 (42%), Gaps = 83/450 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG GS  +R  PV  S      + A+A G  HT+ +   G ++A G N +GQ
Sbjct: 367 WGHNEGGQLGDGSTTNRSTPVQVSGLAD--VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQ 424

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S  P++++GL  +V+ I+ GY+H+ A+  DG ++ WG N  GQLG G    
Sbjct: 425 LGDGTTINSS-TPVQVNGLT-DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITN 482

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---GKVLSWGAGGSGRLGHGQES---- 215
           +  P    +  +  + T     G    V+++     G V   G   +    +G  +    
Sbjct: 483 RSTPAQRSLSGMKSVATPTVTTGSATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYF 542

Query: 216 ----------------SILGFLRSTSEYTPRLIKELEG-----------VKVKIAAAGFL 248
                           + LG L   + Y  R+  +  G            + +I+A  + 
Sbjct: 543 DATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAY- 601

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           H+  +  +G V+ +G     ++       +  P  +S L  +  +  G YHT  L S G 
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGT 661

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGW- 366
           ++TWG N +G LG G+     +P +V G    + V  ++ G  HT A+ S+G + TWG+ 
Sbjct: 662 VWTWGWNNSGQLGDGTTINRSTPVQVIG---LTDVIAIAGGDYHTIALKSDGTVWTWGFN 718

Query: 367 -----GG--------------------------------SHGTFSEDGHSSGGQLGHGND 389
                GG                                S GT    G++  GQLG G+ 
Sbjct: 719 YYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGST 778

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            D++ P  V+   ++ A  ++ G+ HT AL
Sbjct: 779 TDHLTPVQVSGLTDIIA--IAGGYIHTIAL 806



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/293 (29%), Positives = 135/293 (46%), Gaps = 23/293 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+  +R  PV         + A+A G  HT+ L   G V+  G N +GQ
Sbjct: 665 WGWNNSGQLGDGTTINRSTPVQVIGLTD--VIAIAGGDYHTIALKSDGTVWTWGFNYYGQ 722

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+++ GL  +++ I+ GY HS A+  DG ++ WG N  GQLG G    
Sbjct: 723 LGGGATTNRS-TPVQVKGLA-DIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTD 780

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+  +V  L+ I     A G+  ++A+   G V +WG    G+LG G          
Sbjct: 781 HLTPV--QVSGLTDII--AIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGT--------- 827

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  +  L    V    A   H+  +  +G V+ +G     ++   +G+   R  
Sbjct: 828 TTNSSTPVQVSGL--TDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL--GDGSTTERSL 883

Query: 283 LISKLPYSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  +  ++ +   G  YHT  L S G ++ WG N N  LG  S     +P R
Sbjct: 884 PVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNSSTPVR 936



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 33/294 (11%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           QIS G +H+  +  DG ++ WG N NGQLG      +  P+  +V  L+ +     A G 
Sbjct: 147 QISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPV--QVSGLTDVI--AIAGGA 202

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             ++A+   G V +WG    G+LG G          +T   TP  +  L    V   A G
Sbjct: 203 YHTIALKSDGTVWAWGNNEGGQLGDGS---------TTDRSTPVQVSGL--TDVIAIAGG 251

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
           + H+  +  +G V+ +GD    ++      +   P  +  L     +  G  HT  L S 
Sbjct: 252 YAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSDVIAIAGGNAHTIALKSD 311

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G ++ WG NE G LG GS     +P +V G    + V  ++ G+ HT  + S+G + TW 
Sbjct: 312 GTVWAWGDNEGGQLGDGSTTNRSTPVKVSG---LADVIAIAGGYSHTIVLRSDGTVWTW- 367

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                      GH+ GGQLG G+  +   P  V+   +V A  ++ G  HT A+
Sbjct: 368 -----------GHNEGGQLGDGSTTNRSTPVQVSGLADVIA--IAGGVYHTIAV 408



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 129/294 (43%), Gaps = 33/294 (11%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            QIS G +H+  +  DG ++  G N NGQLG G    +  P+  +V  L+ +     A G 
Sbjct: 1043 QISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPV--QVSGLTDVI--AIAGGD 1098

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              ++A+     V +WG+   G+LG G           T+   P  +  L    +   A G
Sbjct: 1099 YHTIALKSDNTVWAWGSNSYGQLGDGTI---------TNRSIPTPVTYL--TNIIAIAGG 1147

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            ++H+  +  +G V+ +G     ++      +   P  +S L     +     HT  L S 
Sbjct: 1148 YVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTVALKSD 1207

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            G ++ WG N  G LG GS     +P +V G    + V  ++ G+ HT A+ S+G + TWG
Sbjct: 1208 GTVWAWGYNGYGQLGDGSTTNRSTPVQVSG---LTDVIAIAGGYVHTIALKSDGTVWTWG 1264

Query: 366  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            W  S            GQLG G  ++ + P  V       A+ ++ G  HT AL
Sbjct: 1265 WNNS------------GQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIAL 1304



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 35/296 (11%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-AL 184
            QIS G +H+  +  DG ++ +G N N QLG G       P+      +SG+    A A 
Sbjct: 594 TQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQ-----VSGLTDAIAIAG 648

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A+   G V +WG   SG+LG G          + +  TP  +  L    V   A
Sbjct: 649 GVYHTIALKSDGTVWTWGWNNSGQLGDGT---------TINRSTPVQVIGL--TDVIAIA 697

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            G  H+  +  +G V+ +G     ++      +   P  +  L     +  G  H+  L 
Sbjct: 698 GGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLADIIAIAGGYVHSIALK 757

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILT 363
           S G ++ WG N  G LG GS     +P +V G    + +  ++ G+ HT A+ S+G +  
Sbjct: 758 SDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSG---LTDIIAIAGGYIHTIALKSDGTVWA 814

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           W            GH+ GGQLG G   +   P  V+   +V A  V+    HT AL
Sbjct: 815 W------------GHNEGGQLGDGTTTNSSTPVQVSGLTDVIA--VTARLYHTIAL 856



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 8/132 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+  +R  PV  S        A+A G  HT+ L     V+A G N +GQ
Sbjct: 1263 WGWNNSGQLGDGTTINRLTPVQVSGLTD--AIAIAGGDYHTIALKSDNTVWAWGSNSYGQ 1320

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG    I   L P+++SGL  + + I+ G +H+ A+  D  ++ WG NS GQLG    A 
Sbjct: 1321 LGDGTTIN-RLTPVQVSGLT-DAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378

Query: 163  KVIPIPTKVECL 174
             + P     +CL
Sbjct: 1379 SLTP----AQCL 1386


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 140/273 (51%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 20  GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 79

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WGKNS+GQLGLGK+  
Sbjct: 80  GIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFP 139

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 140 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 192

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P L+  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 193 PVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQ 252

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 253 LVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 147/298 (49%), Gaps = 22/298 (7%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSA 137
           G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S G  HS A
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVSCGKEHSLA 61

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +   G ++ WG  S GQLG+G+       IP K++ L+ I   Q A G   S+A++  G+
Sbjct: 62  VCHKGRVFAWGAASEGQLGIGELKETTF-IPKKIKTLADIKIIQVACGHYHSLALSEDGQ 120

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  +G
Sbjct: 121 VFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSLSG 172

Query: 258 RVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYT 311
             + +G     ++    GN+A     +P L+  L     V   CG  HT VLT  G+++T
Sbjct: 173 TSFGWGSNNAGQLALS-GNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFT 231

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
           +G N  G LG  S      P+ V+    E  V Q+ CG  HT A   + G+++++G G
Sbjct: 232 FGDNSYGQLGHDSTAEKRGPQLVER--IEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 35/298 (11%)

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G HHS  +  DG +   G NS GQ  LG+K       P ++  L  +     + G E S
Sbjct: 2   SGEHHSLLLLSDGTVQSCGDNSRGQ--LGRKGTPRGEQPERIPALETLHVALVSCGKEHS 59

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +AV   G+V +WGA   G+LG G+       L+ T+ + P+ IK L  +K+   A G  H
Sbjct: 60  LAVCHKGRVFAWGAASEGQLGIGE-------LKETT-FIPKKIKTLADIKIIQVACGHYH 111

Query: 250 SACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           S  + E+G+V+ +G  +  ++     F      +R   +  +P + +V  GG H+  L+ 
Sbjct: 112 SLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAHSFALSL 170

Query: 306 GGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKIL 362
            G  + WGSN  G L +   +  V      + G      V  +SCG++HTA ++ +GK+ 
Sbjct: 171 SGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVF 230

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFNHTGA 418
           T+            G +S GQLGH +  +   P +V   E ++ L  Q+ CG  HT A
Sbjct: 231 TF------------GDNSYGQLGHDSTAEKRGPQLV---ERIEGLVSQIDCGSYHTLA 273



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG    G+LG+G L E+ + P          +  +ACG  H+L L+E G V++ 
Sbjct: 67  RVFA--WGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSW 124

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG N+ GQ
Sbjct: 125 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQ 184

Query: 155 LGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L    A V    P  V  L  +     + G+E +  +T  GKV ++G    G+LGH  
Sbjct: 185 LALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDS 244

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +   G         P+L++ +EG+  +I    +   A +   G+V  FG
Sbjct: 245 TAEKRG---------PQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 86/166 (51%), Gaps = 6/166 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+ +G  +  G N+ G
Sbjct: 124 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAG 183

Query: 102 QLGISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ +  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 184 QLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHD 243

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             A K    P  VE + G+ ++     +     V   G+V+S+G G
Sbjct: 244 STAEK--RGPQLVERIEGLVSQIDCGSYHTLAYVYTTGQVVSFGRG 287


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 171/353 (48%), Gaps = 43/353 (12%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYM 146
           ETG V+      FG+   ++NI     P +   LK +V  QIS G  H++ IT +G L+M
Sbjct: 1   ETGAVFT-----FGKSKFADNI-----PSKFW-LKNDVPSQISCGDEHTALITKNGRLFM 49

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +G N+ GQLGLG K    +  PT V+ L       AA G   ++  TG G+V S G    
Sbjct: 50  FGSNNWGQLGLGSKV--TVNKPTCVKALKSEKVLLAACGRNHTLICTGEGRVFSSGGNSE 107

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDR 265
           G+LG G               T R I  L+ +  +K+ AAG   SA + E+G+++++GD 
Sbjct: 108 GQLGLGD---------CEERTTFRRIHALDSLGPIKMLAAGSNTSAALTESGKLFMWGDN 158

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              ++   + +HA  P  +S       V CG YH+ ++T+ G LYT+G  ++G LG+ + 
Sbjct: 159 TEGQIGLGKESHAPWPQEVSVGAPVSWVSCGYYHSALVTAAGALYTFGERDSGKLGLTTE 218

Query: 326 DVLHSPERVQGPFSE--SPVDQVSCGWKHTAAISEG------KILTWGWGGSHGTF---S 374
            +     RV  P      PV QV+CG  HT A++ G         T G+      F   S
Sbjct: 219 QLPR--HRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLS 276

Query: 375 ED-----GHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           ED     G    GQLGHG  V +   P +V   +  +  QV+CG NH+  + +
Sbjct: 277 EDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQVACGENHSAVITD 329



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 154/354 (43%), Gaps = 53/354 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +T+ G ++  G N++GQLG+   +  + +P  +  LK E V ++  G +H
Sbjct: 31  ISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVN-KPTCVKALKSEKVLLAACGRNH 89

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVT 193
           +   T +G ++  G NS GQLGLG    +      ++  L  +   K  A G   S A+T
Sbjct: 90  TLICTGEGRVFSSGGNSEGQLGLGDCEERTTF--RRIHALDSLGPIKMLAAGSNTSAALT 147

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             GK+  WG    G++G G+ES           + P   +   G  V   + G+ HSA +
Sbjct: 148 ESGKLFMWGDNTEGQIGLGKES-----------HAPWPQEVSVGAPVSWVSCGYYHSALV 196

Query: 254 DENGRVYIFGDRAVDKM--LFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGG--- 307
              G +Y FG+R   K+    ++    R P  +  +     +V CGG HT  LT GG   
Sbjct: 197 TAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTGGGSTR 256

Query: 308 ----------------------ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
                                  L+T+G  + G LG G+        R+   F +  V Q
Sbjct: 257 RRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKKGRVRQ 316

Query: 346 VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           V+CG  H+A I++G +L     G HG            LG  N  +   PT+ +
Sbjct: 317 VACGENHSAVITDGGLLYTFGDGRHGKLG---------LGDENFTNQFKPTLCS 361



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 51/348 (14%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++LK D+      G     + +   R F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 19  SKFWLKNDVPSQISCGDEHTALITKNGRLF--MFGSNNWGQLGLGSKVTVNKPTCVKALK 76

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKK--E 124
              +   ACG  HTL  T  G V+++G N  GQLG+    E   +     RI  L     
Sbjct: 77  SEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFR----RIHALDSLGP 132

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           +  ++ G + S+A+T  G+L+MWG N+ GQ+GLGK++    P P +V    G      + 
Sbjct: 133 IKMLAAGSNTSAALTESGKLFMWGDNTEGQIGLGKESHA--PWPQEVSV--GAPVSWVSC 188

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G+  S  VT  G + ++G   SG+LG   E       +      P+ ++ + G  V+  A
Sbjct: 189 GYYHSALVTAAGALYTFGERDSGKLGLTTE-------QLPRHRVPQPVRSI-GEPVRQVA 240

Query: 245 AGFLHSA------------------CIDENGRVYIFGDRAVDKMLFQEGN--------HA 278
            G  H+                    +D  G +++  DR     L Q G          +
Sbjct: 241 CGGGHTVALTGGGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFES 300

Query: 279 RRPSLIS--KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           R P L+   K     +V CG  H+ V+T GG LYT+G   +G LG+G 
Sbjct: 301 RLPRLVEHFKKGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGD 348



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 8/101 (7%)

Query: 30  WISSTLQRRFAALWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
           W+S    R F   +G G +G+LG G+   ESR  P +   F+K  ++ +ACG  H+  +T
Sbjct: 274 WLSE--DRLFT--FGLGQFGQLGHGTFVFESRL-PRLVEHFKKGRVRQVACGENHSAVIT 328

Query: 88  ETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQ 127
           + G +Y  G    G+LG+  EN     +P   S   K  VQ
Sbjct: 329 DGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQ 369


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 168/388 (43%), Gaps = 34/388 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+      PV        ++ A+  GG H+L LT TG V A G N  GQ
Sbjct: 61  WGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQ 120

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    S  P+ +       +  I+ G  HS A+T  G +  WG+N +GQLG G   
Sbjct: 121 LGNGDTTNRS-TPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTT 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   +G+     A G   S+AVT  G VL+WG   +G+LG+G         
Sbjct: 180 NMSTPV--GVSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGT-------- 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
            +T   TP  +    G  +   AAG     HS  +   G    +G+ A D  L       
Sbjct: 230 -TTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALAWGNNA-DGQLGNGDTTN 287

Query: 279 RRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           R   +   LP       V  GG H+  LT+ G +  WG N +G LG G+     +P  V 
Sbjct: 288 RSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVD 347

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
            P   + ++ ++ G+    A++  G ++ WG             +  GQLG+G+ ++   
Sbjct: 348 LPTGAT-INAIAAGFDFGLALTTAGAVVAWG------------RNVSGQLGNGDTINRST 394

Query: 395 PTIVNFGENVKALQVSCGFNHTGALLEY 422
           P  V+    V    V+ G  H+ AL+  
Sbjct: 395 PVDVDLPAGVTITAVAAGGQHSMALVAL 422



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 147/359 (40%), Gaps = 34/359 (9%)

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK 122
           V+ +     SL A   G +  +  ++T   +A G N  GQLG     G S          
Sbjct: 31  VMVTQAATMSLAAAENGPSAAIRASDT--YFAWGDNSDGQLGNGTTTGSSTPVDVYLPAG 88

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
             +  ++ G  HS A+T  G +  WG+N +GQLG G    +  P+   V+  +G      
Sbjct: 89  TTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPV--DVDLPAGTTITAI 146

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   S+A+T  G VL+WG    G+LG+G          +T+  TP  +    GV +  
Sbjct: 147 AAGAFHSLALTSAGTVLAWGENLHGQLGNGG---------TTNMSTPVGVSLPAGVTITA 197

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY---- 298
            AAG  HS  +   G V  +GD +  ++       +  P  +  LP    +         
Sbjct: 198 VAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDV-DLPAGTTITAVAAGVAG 256

Query: 299 --HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             H+  LTS G    WG+N +G LG G      +P  V  P   + +  V+ G  H+ A+
Sbjct: 257 AAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVT-ITAVAAGGLHSLAL 315

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           +  G ++ W            G +  GQLG+G       P  V+         ++ GF+
Sbjct: 316 TAAGAVVAW------------GRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFD 362



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 5/160 (3%)

Query: 35  LQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           L    AAL WGN   G+LG G   +R  PV        ++ A+A GG H+L LT  G V 
Sbjct: 263 LTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVV 322

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
           A G N  GQLG     G S  P+ +       +  I+ G+    A+T  G +  WG+N +
Sbjct: 323 AWGRNVSGQLGNGTTTGSS-TPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVS 381

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           GQLG G    +  P+   V+  +G+     A G + S+A+
Sbjct: 382 GQLGNGDTINRSTPV--DVDLPAGVTITAVAAGGQHSMAL 419


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 152/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +    P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 301 WGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNA 360

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  ++  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 361 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 419

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            K  + +  P +VE LSG+ T   A G             QS +    GK+ +WG G   
Sbjct: 420 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKS 477

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + S L          P  +  L        A G   +  +  +G+VY  G   V
Sbjct: 478 RLGHGDKESRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 527

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+  KL     EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 528 YGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 587

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+   +P  V     E  V  ++CG   TAAI
Sbjct: 588 IEDRKAPSLVDT-LKERHVKNIACGSNFTAAI 618



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 47/364 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
           +ACG  H   ++  G V+  G    G+LG    +G  +  P  I  L    V  ++ G  
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSVDFVACGEF 339

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           H+ A+T+ GE+Y WG  ++  G LG G   +  IP       L G+     + G   +  
Sbjct: 340 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGP-LEGLQIASVSCGPWHTAL 398

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG + ++         + PR ++ L G++    A G  H+A
Sbjct: 399 ITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHAA 449

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEVVCG 296
            I E           +G+++ +GD   DK     G+   R  P+ +S L       V CG
Sbjct: 450 AIVEVIVTQSTSSISSGKLFTWGDG--DKSRLGHGDKESRLKPTCVSALIDHTFHRVACG 507

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++YT GS   G LG  + D    P  V+    +  V++++CG  H A +
Sbjct: 508 HSLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLIKDCVEEIACGAYHVAVL 566

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S  ++ TWG G +            G+LGHG+  D   P++V+  +      ++CG N 
Sbjct: 567 TSRNEVFTWGKGAN------------GRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNF 614

Query: 416 TGAL 419
           T A+
Sbjct: 615 TAAI 618



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 130/304 (42%), Gaps = 49/304 (16%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  + G  K A  V     + IP  +E    +     A G   +  V+
Sbjct: 234 GDVYIWGEVLCDNVAKFGAEKNATCVGSRSDVLIPKPLESNVVLDVHHIACGVRHAALVS 293

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V +WG    GRLGHG    + G         P+LI+ L    V   A G  H+  +
Sbjct: 294 RQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSVDFVACGEFHTCAV 344

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G       P  IS  P        V CG +HT ++TS G
Sbjct: 345 TMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITSTG 403

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +L+T+G    G LG G  + +  P  V+   S      V+CG  H AAI E         
Sbjct: 404 QLFTFGDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTQSTSS 462

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GK+ TWG          DG  S  +LGHG+    + PT V+   +    +V+CG + 
Sbjct: 463 ISSGKLFTWG----------DGDKS--RLGHGDKESRLKPTCVSALIDHTFHRVACGHSL 510

Query: 416 TGAL 419
           T  L
Sbjct: 511 TVGL 514



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+A +   G V+ +G+ +  ++    G     P LI  L 
Sbjct: 268 PKPLESNVVLDVHHIACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLA 327

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P+R+ GP     +
Sbjct: 328 ATSVDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQI 386

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             VSCG  HTA I S G++ T+G     GTF        G LGHG+     +P  V    
Sbjct: 387 ASVSCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDKETVFYPREVESLS 434

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ + V+CG  H  A++E +
Sbjct: 435 GLRTIAVACGVWHAAAIVEVI 455


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 158/331 (47%), Gaps = 27/331 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E      P      +  +++  ACGG+HTL LT+ G +Y  G ND 
Sbjct: 6   WGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N   +  P  IS L+  +V Q+S G  HS A+T  G+L+ WG N+ GQLG   
Sbjct: 66  GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATGQLGHDL 125

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 P P  ++ ++     Q + G    +A+T  G++ +WGA   G+LG G       
Sbjct: 126 DMVSY-PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLG------- 177

Query: 220 FLRSTSEYTP--RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
              +T +  P   L+K L G+ +   A G  HS  + ++G ++ +G     ++   + + 
Sbjct: 178 ---TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLDS 234

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE--- 332
              P+ +  L       + CG   +  LT  G ++T G    G LG G+    H  E   
Sbjct: 235 RCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGT----HGNEILP 290

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI--SEGKI 361
           R+      S + Q++CG KHT A   S GK+
Sbjct: 291 RMVFELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 150/304 (49%), Gaps = 21/304 (6%)

Query: 44  GNGDYGRLG--LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG    +L ++ RP   SA E + +  ++CG +H+L LT  G +++ G N  G
Sbjct: 61  GNNDHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNATG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQIS G+ H  A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV P  T V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GKKV-PTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLD----- 233

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P  +K L  + V+  + G   S  + + G V+  G     ++    G H   
Sbjct: 234 ----SRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQL--GHGTHGNE 287

Query: 281 --PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+GS    ++P+ V+
Sbjct: 288 ILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYGFGLGGVGQLGVGSSVSFNTPQIVR 347

Query: 336 GPFS 339
           GP+S
Sbjct: 348 GPWS 351



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 137/303 (45%), Gaps = 32/303 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+LY  G N +GQLG        +P   P  +  L      Q 
Sbjct: 38  VQQAACGGSHTLLLTKDGKLYTCGNNDHGQLG---HDTNNLPNKRPQFISALENYIVTQV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G++ SWG+  +G+LGH         L   S   PR+IK +    V  
Sbjct: 95  SCGLSHSLALTNWGQLFSWGSNATGQLGHD--------LDMVSYPAPRMIKSIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            + G  H   +  +G ++ +G     ++ L   G      +L+  L   P +  + CGG 
Sbjct: 147 ISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
           H+  ++  G ++ WG N  G LG+  +D    P +++   S   V  +SCG   +  ++ 
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLG-VRYISCGDDFSVFLTQ 264

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           EG + T G G    TF        GQLGHG   + I P +V      K  Q++CG  HT 
Sbjct: 265 EGGVFTCGLG----TF--------GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTL 312

Query: 418 ALL 420
           A +
Sbjct: 313 AFV 315



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 26/274 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG   +G+LGLG    + +  P +++       +QAA G   ++ +T  GK+ + G 
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH           +     P+ I  LE   V   + G  HS  +   G+++ +G
Sbjct: 63  NDHGQLGHDT--------NNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 264 DRAVDKMLFQ-EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++    +      P +I  +      ++ CG  H   LT+ GEL+ WG+NE G L
Sbjct: 115 SNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGANEYGQL 174

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHS 379
           G+G+         +    +  P+  ++CG  H+ A+S+ G I  WG      TF      
Sbjct: 175 GLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF------ 224

Query: 380 SGGQLGHGNDVD-YIHPTIVNFGENVKALQVSCG 412
             GQLG  ND+D   +PT +    ++    +SCG
Sbjct: 225 --GQLGL-NDLDSRCYPTQLKTLRSLGVRYISCG 255



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 103/225 (45%), Gaps = 26/225 (11%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG+   G LG       LG +      TPR +   +   V+ AA G  H+  + ++G++Y
Sbjct: 6   WGSTVHGELG-------LGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58

Query: 261 IFGDRAVDKMLFQEGNHA-RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
             G+    ++     N   +RP  IS L      +V CG  H+  LT+ G+L++WGSN  
Sbjct: 59  TCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNAT 118

Query: 318 GCLGIGSIDVLHSP-ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
           G LG   +D++  P  R+    +   V Q+SCG  H  A++  G++  W           
Sbjct: 119 GQLG-HDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAW----------- 166

Query: 376 DGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
            G +  GQLG G     +   T+V     +    ++CG NH+ A+
Sbjct: 167 -GANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAV 210



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 23/118 (19%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPF-----SESPVDQVSCGWKHTAAIS-EGKIL 362
           LY WGS  +G LG+G I+     E+V  P        + V Q +CG  HT  ++ +GK+ 
Sbjct: 3   LYCWGSTVHGELGLGGIE----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLY 58

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           T G            ++  GQLGH  N++    P  ++  EN    QVSCG +H+ AL
Sbjct: 59  TCG------------NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLAL 104


>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
 gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
           [Paenibacillus sp. HGF5]
          Length = 719

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 163/346 (47%), Gaps = 34/346 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  +R  PV+      H +  +  G   ++ L + G V+  G N+ GQ
Sbjct: 57  WGYGDRGQLGDGTWNTRTTPVMAKNL-NHVID-IHSGVRSSMALRQDGTVWTWGANENGQ 114

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI   I     P ++ GL   +  IS G  +H  A++ +G ++ WGKN NG+LG G   
Sbjct: 115 LGIG-TITNVNAPAQVPGLSG-IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTT 172

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  LS + T  AA G+  S+A+   G V +WG  GSG LG G         
Sbjct: 173 QQNSPV--LVAGLSDV-TAIAAGGY-YSLALKSDGTVWAWGVNGSGELGDGT-------- 220

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T  + P  +  L    V   AAG  HS  I ++G V+ +G+     +      H  RP
Sbjct: 221 -TTERHVPVQVAGL--TDVMAIAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTRTHRTRP 277

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L +   V  GGYH+  +   G +++WG N    LG+ S      P  V G     
Sbjct: 278 VQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGI---E 334

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
            V ++S G  H+ A+ +   + WGW          G++SGGQLG G
Sbjct: 335 HVREISAGGFHSVAMKKDGTV-WGW----------GYNSGGQLGDG 369



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 141/285 (49%), Gaps = 20/285 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFG 101
           WG  + G+LG+G++ +   P          +KA++ G A H + L+E G V+  G ND G
Sbjct: 107 WGANENGQLGIGTITNVNAPAQVPGLS--GIKAISGGLAYHGMALSENGTVWTWGKNDNG 164

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG       +  P+ ++GL  +V  I+ G ++S A+  DG ++ WG N +G+LG G   
Sbjct: 165 ELGNGTTTQQN-SPVLVAGLS-DVTAIAAGGYYSLALKSDGTVWAWGVNGSGELGDGTTT 222

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            + +P+  +V  L+ +     A G   S+A+   G V +WG    G LG G         
Sbjct: 223 ERHVPV--QVAGLTDVMA--IAAGGSHSLAIRQDGTVWAWGNNTYGTLGDGTR------- 271

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T    P  ++ L+ + V +A  G+ HS  +D+ G V+ +GD +  ++       +  P
Sbjct: 272 --THRTRPVQVRNLQHI-VAVAGGGY-HSLAVDQAGNVWSWGDNSQQQLGLSSNASSLIP 327

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++ + +  E+  GG+H+  +   G ++ WG N  G LG G+ +
Sbjct: 328 VPVTGIEHVREISAGGFHSVAMKKDGTVWGWGYNSGGQLGDGTYN 372



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 117/250 (46%), Gaps = 19/250 (7%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           ++  GY+H++++   GE+Y WG    GQLG G    +  P+  K   L+ +    +  G 
Sbjct: 37  KLVAGYYHTASLVSSGEVYSWGYGDRGQLGDGTWNTRTTPVMAK--NLNHVIDIHS--GV 92

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+   G V +WGA  +G+LG G  +++           P  +  L G+K  I+   
Sbjct: 93  RSSMALRQDGTVWTWGANENGQLGIGTITNV---------NAPAQVPGLSGIKA-ISGGL 142

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H   + ENG V+ +G     ++          P L++ L     +  GGY++  L S 
Sbjct: 143 AYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSDVTAIAAGGYYSLALKSD 202

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G ++ WG N +G LG G+    H P +V G    + V  ++ G  H+ AI +   + W W
Sbjct: 203 GTVWAWGVNGSGELGDGTTTERHVPVQVAG---LTDVMAIAAGGSHSLAIRQDGTV-WAW 258

Query: 367 G-GSHGTFSE 375
           G  ++GT  +
Sbjct: 259 GNNTYGTLGD 268



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 110/232 (47%), Gaps = 19/232 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G+   R  PV  +      + A+A GG+H+L + + G V+A G N +G 
Sbjct: 208 WGVNGSGELGDGTTTERHVPVQVAGLTD--VMAIAAGGSHSLAIRQDGTVWAWGNNTYGT 265

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P+++  L + +V ++ G +HS A+   G ++ WG NS  QLGL   A+
Sbjct: 266 LGDGTRT-HRTRPVQVRNL-QHIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNAS 323

Query: 163 KVIPIP-TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +IP+P T +E +  I    +A GF  SVA+   G V  WG    G+LG G  ++  G  
Sbjct: 324 SLIPVPVTGIEHVREI----SAGGF-HSVAMKKDGTVWGWGYNSGGQLGDGTYNNTRGI- 377

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                  P L K +         +G L+   I  +  V +   +A D M  Q
Sbjct: 378 -------PTLTKAVLDTTSPDTGSGSLNPHSITSD-SVALEWPKASDNMTEQ 421


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 137/285 (48%), Gaps = 23/285 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG+LG     SR   +  S+ E  ++  ++CG  H++ + + G +Y+ G    GQL
Sbjct: 59  GQNPYGQLGRKGNNSRIEQI--SSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQL 116

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +    +  P RI+GL  ++++QIS G  HS A+  DG ++ WG+N  GQLGLG +  
Sbjct: 117 GTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQII 176

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P  V+ L GI   Q   G  Q+ A++  G V +WG   +G+LG   ++       
Sbjct: 177 NQ-ATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDA------- 228

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P  +  L  + V   + G  H+A ++++G VY FGD    ++  Q GN    P 
Sbjct: 229 KKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQ 288

Query: 283 LISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            I +  YS    +V CG YHT        LY +  N     G GS
Sbjct: 289 KIEE--YSRQVSQVACGRYHTL-------LYVFTCNRIVSFGKGS 324



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 181/369 (49%), Gaps = 35/369 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+L +   E        + +  +K S++ ++ G  H+L+L + G + + G N +
Sbjct: 4   WGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPY 63

Query: 101 GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N    +E  +IS L+ + +V +S G +HS A+  +G +Y WG  S GQLG GK
Sbjct: 64  GQLGRKGN-NSRIE--QISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGK 120

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++K    P ++  L      Q + G   SVA+   G+V SWG    G+LG G  S I+ 
Sbjct: 121 FSSKNF-TPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKCGQLGLG--SQII- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                ++ TP+L+K L+G+ +    AG   +  +  +G V+ +G     ++ F+  N A+
Sbjct: 177 -----NQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFK--NDAK 229

Query: 280 RPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           + +     PY+ +         + CG  HT VL   G +YT+G +  G LG  S +    
Sbjct: 230 KGTF---KPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSV 286

Query: 331 PERVQGPFSESPVDQVSCGWKHTA--AISEGKILTWGWGG--SHGTFSEDGHSSGGQLGH 386
           P++++  +S   V QV+CG  HT     +  +I+++G G     G       +   QL  
Sbjct: 287 PQKIEE-YSRQ-VSQVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQAEASQLPS 344

Query: 387 GNDVDYIHP 395
             D+  + P
Sbjct: 345 AFDISSLVP 353



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 35/285 (12%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG N  GQL + ++  +V+              ++ ++G + S+ +   G +LS G 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 204 GGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
              G+LG  G  S I              I  LE   +   + G  HS  + + G +Y +
Sbjct: 61  NPYGQLGRKGNNSRI------------EQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSW 108

Query: 263 GDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           GD +  ++    F   N    P  I+ L   +  ++ CG +H+  L   G +++WG N+ 
Sbjct: 109 GDGSEGQLGTGKFSSKNFT--PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQNKC 166

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           G LG+GS  +  +  ++       P+ QV+ G   T A+S  G +  W            
Sbjct: 167 GQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAW------------ 214

Query: 377 GHSSGGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G ++ GQLG  ND       P  V+   ++    +SCG  HT  L
Sbjct: 215 GRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 17/151 (11%)

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           +E  H +      K    ++V  G  H+  L   G L + G N  G LG    +     E
Sbjct: 19  KEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGRKGNN--SRIE 76

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DV 390
           ++    +++ VD VSCG  H+ A+  EG I +WG G            S GQLG G    
Sbjct: 77  QISSLEAQTIVD-VSCGTNHSVAMCDEGNIYSWGDG------------SEGQLGTGKFSS 123

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               P  +    N K +Q+SCG  H+ AL E
Sbjct: 124 KNFTPKRITGLLNRKIIQISCGNFHSVALAE 154


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 113/372 (30%), Positives = 179/372 (48%), Gaps = 53/372 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQIST 130
           + ++ACGG H + +T+ G V++ G     +LG    +  S   L   + G+  E+V  + 
Sbjct: 294 VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELV--AC 351

Query: 131 GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFE 187
           G +HS A+T+ G+LY WG   +++G LG G +A+    IP KV   + G+     A G  
Sbjct: 352 GEYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHW--IPKKVSGPMEGMHVSYVACGPW 409

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +  VT  G++ ++G G  G LGHG  SS+           PR ++ L G +    A G 
Sbjct: 410 HTAVVTSAGQLFTFGDGTFGALGHGDHSSM---------SIPREVEALRGQRTMRVACGV 460

Query: 248 LHSACIDE---------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS 290
            H+A + E               +G+++ +GD   DK     G+   R  P  ++ L   
Sbjct: 461 WHTAAVVELMIASSSFESSGSSSSGKLFTWGDG--DKGRLGHGDKEPRLVPQSVTALINE 518

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
              +V CG   +  LT+ G +YT GS   G LG    D    P  V+G  + S V++V+C
Sbjct: 519 SFCQVACGHNLSVALTTSGRVYTMGSAVYGQLGSPVADG-KIPTLVEGKIANSFVEEVAC 577

Query: 349 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  H A + S+ ++ TWG G            + GQLGHG++     PT+V+F ++ +  
Sbjct: 578 GSYHVAVLTSKTEVYTWGKG------------TNGQLGHGDNDHRNTPTLVDFLKDKQVK 625

Query: 408 QVSCGFNHTGAL 419
            V CG N T A+
Sbjct: 626 NVVCGLNFTAAI 637



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 152/337 (45%), Gaps = 36/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG     RLG G       P +  A    +++ +ACG  H+  +T +G +Y    G ++ 
Sbjct: 316 WGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLYTWGDGTHNS 375

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++SG  +   V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 376 GLLGHGSEASHWI-PKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLFTFGDGTFGALGHG 434

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
             ++  + IP +VE L G  T + A G   + AV                  GK+ +WG 
Sbjct: 435 DHSS--MSIPREVEALRGQRTMRVACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGD 492

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG +   L          P+ +  L        A G   S  +  +GRVY  G
Sbjct: 493 GDKGRLGHGDKEPRL---------VPQSVTALINESFCQVACGHNLSVALTTSGRVYTMG 543

Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             AV   L       + P+L+  K+  S  EEV CG YH  VLTS  E+YTWG   NG L
Sbjct: 544 S-AVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQL 602

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           G G  D  ++P  V     +  V  V CG   TAAIS
Sbjct: 603 GHGDNDHRNTPTLVDF-LKDKQVKNVVCGLNFTAAIS 638



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 138/307 (44%), Gaps = 51/307 (16%)

Query: 142 GELYMWGKN-SNGQLGLG------KKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVT 193
           G+++MWG+   +G +G G        + K+  + P  +E    +     A G + +V VT
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKHAVLVT 308

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V SWG     RLGHG E  +           P+LI  L G+ +++ A G  HS  +
Sbjct: 309 KKGEVFSWGEECGSRLGHGVEVDV---------SHPKLIDALCGMNIELVACGEYHSCAV 359

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGE 308
             +G +Y +GD   +  L   G+ A    P  +S   +  +   V CG +HT V+TS G+
Sbjct: 360 TLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQ 419

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---------- 358
           L+T+G    G LG G    +  P  V+    +  + +V+CG  HTAA+ E          
Sbjct: 420 LFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTM-RVACGVWHTAAVVELMIASSSFES 478

Query: 359 ------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                 GK+ TWG G              G+LGHG+    + P  V    N    QV+CG
Sbjct: 479 SGSSSSGKLFTWGDGDK------------GRLGHGDKEPRLVPQSVTALINESFCQVACG 526

Query: 413 FNHTGAL 419
            N + AL
Sbjct: 527 HNLSVAL 533



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 108/241 (44%), Gaps = 32/241 (13%)

Query: 196 GKVLSWGAG--------GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           G V  WG G        G  R+G    + I   L       P+ ++    + V   A G 
Sbjct: 249 GDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALL-------PKALESTVVLDVHSIACGG 301

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTS 305
            H+  + + G V+ +G+    ++          P LI  L     E V CG YH+C +T 
Sbjct: 302 KHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTL 361

Query: 306 GGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            G+LYTWG  ++ +G LG GS      P++V GP     V  V+CG  HTA + S G++ 
Sbjct: 362 SGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTAVVTSAGQLF 421

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           T+G     GTF        G LGHG+      P  V      + ++V+CG  HT A++E 
Sbjct: 422 TFG----DGTF--------GALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVEL 469

Query: 423 V 423
           +
Sbjct: 470 M 470


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 20/319 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLG+G+ +  +     SA + + +  +A       H+L LT++G V++ G  D+
Sbjct: 543 GEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDY 602

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   N      P +I  L+ +EVV ++ G+ HS+ +TVDG+L+ +G    G+LG G 
Sbjct: 603 GKLG-HGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            A K    P +V  L      Q A G   ++ ++  G  V ++G G  G+LG G      
Sbjct: 662 SANK--KTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGS----- 714

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                T++ +P+ I  L G+  K    G   S  +  +GRV+ FG   +           
Sbjct: 715 ----CTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGP 770

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           ++P  I  L   + ++V  G  H   LTS GE++ WG+N +G LG+G  +    P  +  
Sbjct: 771 QKPQQIQALASHFIDDVCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPD 830

Query: 337 PFSESPVDQVSCGWKHTAA 355
                 + Q+S G  H+AA
Sbjct: 831 -LKGKNIRQISAGRNHSAA 848



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 181/391 (46%), Gaps = 44/391 (11%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A LWG G +G+L   S      P V  +    S + + CG   T  +   G + A G   
Sbjct: 490 AYLWGGGRHGQLA-ESGRGVNVPTVTKSLA--SAQQVVCGQNCTFVVQVNGTILACGEGS 546

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNG 153
           +G+LG+  S+++ ++L P  IS L+  VV QI+T      HS A+T  GE++ WG    G
Sbjct: 547 YGRLGMGNSDDL-FTLSP--ISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYG 603

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G    +  P   ++E L G      A GF+ S  VT  GK+ ++G G  GRLGHG 
Sbjct: 604 KLGHGNSDRQRRP--RQIEALRGEEVVNMACGFKHSAVVTVDGKLFTFGNGDYGRLGHGN 661

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLF 272
                    S ++ TP  +  LE   +   A G  H+  +  +G  V+ FGD    K+  
Sbjct: 662 ---------SANKKTPERVTALEKHAIGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGL 712

Query: 273 QEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                   P  I  L     +++ CG   + VLT+ G ++++G         G +     
Sbjct: 713 GSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQK 772

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P+++Q   +   +D V  G +H  A+ S G++  WGWG          ++  GQLG G+ 
Sbjct: 773 PQQIQA-LASHFIDDVCVGAEHVLALTSTGEV--WGWG----------NNVDGQLGLGHS 819

Query: 390 VDYIHPTIVNF--GENVKALQVSCGFNHTGA 418
                P ++    G+N++  Q+S G NH+ A
Sbjct: 820 NAQREPCVIPDLKGKNIR--QISAGRNHSAA 848



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 127/276 (46%), Gaps = 32/276 (11%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           + Y+WG   +GQL    ++ + + +PT  + L+    +Q   G   +  V   G +L+ G
Sbjct: 489 DAYLWGGGRHGQLA---ESGRGVNVPTVTKSLAS--AQQVVCGQNCTFVVQVNGTILACG 543

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG-VKVKIAAA--GFLHSACIDENGRV 259
            G  GRLG G    +         +T   I  L+G V ++IA +     HS  + ++G V
Sbjct: 544 EGSYGRLGMGNSDDL---------FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEV 594

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
           + +GD    K+     +  RRP  I  L   EEVV   CG  H+ V+T  G+L+T+G+ +
Sbjct: 595 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-RGEEVVNMACGFKHSAVVTVDGKLFTFGNGD 653

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
            G LG G+     +PERV     +  + QV+CG  HT  +S      W +G        D
Sbjct: 654 YGRLGHGNSANKKTPERVTA-LEKHAIGQVACGLNHTLVLSADGNTVWAFG--------D 704

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G    G+LG G+      P  ++    +   ++ CG
Sbjct: 705 GDY--GKLGLGSCTAKTSPQAIDVLAGIGCKKICCG 738



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 80/205 (39%), Gaps = 69/205 (33%)

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCG---------------------------------- 296
           L + G     P++   L  +++VVCG                                  
Sbjct: 501 LAESGRGVNVPTVTKSLASAQQVVCGQNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFT 560

Query: 297 --------GY-------------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
                   GY             H+  LT  GE+++WG  + G LG G+ D    P +++
Sbjct: 561 LSPISALQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIE 620

Query: 336 GPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               E  V+ ++CG+KH+A ++ +GK+ T+G G              G+LGHGN  +   
Sbjct: 621 ALRGEEVVN-MACGFKHSAVVTVDGKLFTFGNGDY------------GRLGHGNSANKKT 667

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           P  V   E     QV+CG NHT  L
Sbjct: 668 PERVTALEKHAIGQVACGLNHTLVL 692


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 175/373 (46%), Gaps = 42/373 (11%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTL---FLTETGCVYATGLNDFGQLGISENIG-YSLEP 115
           WR  +     ++ LK    G + T    F+     +YA G N+FGQLGI  +I  YS + 
Sbjct: 2   WRRAI-----QNCLKIAFIGSSITFTSSFVFSQEQLYAWGWNNFGQLGIGNSISQYSPQL 56

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + I    + V+ ++     S+AI   G+LY WG++  G LG G+   + I IPT VECL 
Sbjct: 57  VPI----QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGLLGNGQ--VENINIPTLVECLK 110

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL---- 231
            +  K  A G     A+T  G++ +WG    G+LGH  ++      R   EY   L    
Sbjct: 111 HLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAK 170

Query: 232 IKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKL 287
           + EL  +  K+   + G   +  + ++G VY  G      +L  E  +A   S   IS L
Sbjct: 171 LPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNK-KGILGYETKNAEELSFKQISNL 229

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
               ++  G   +  L S G ++ WGSN  G LG  S  V+ +P++++G      + Q S
Sbjct: 230 KNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPSPSVIQTPQQIKG---LPKIKQFS 286

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
           CG +   A+S +G + TWG+GG             GQLG  +  D   P  ++F  N+  
Sbjct: 287 CGEQFIGALSADGVLYTWGFGGD------------GQLGTPSKQDIPTPHKISFDHNID- 333

Query: 407 LQVSCGFNHTGAL 419
            +VSCG  H G +
Sbjct: 334 -KVSCGQAHVGII 345



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 183/400 (45%), Gaps = 56/400 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG+G+  S++ P +       ++  +AC  + +  + ++G +Y  G + FG 
Sbjct: 35  WGWNNFGQLGIGNSISQYSPQLVPI---QNVLFVACKSSVSAAIDKSGKLYTWGRSKFGL 91

Query: 103 LG--ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG    ENI     P  +  LK  +   ++ G +H +AIT DG+LY WG   +G+LG   
Sbjct: 92  LGNGQVENINI---PTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSF 148

Query: 160 KAAKVIPIPTKVECLSGIFTK-------------QAALGFEQSVAVTGGGKVLSWGAGGS 206
                +P   K E    + +              Q +LG + ++ ++  G V S G    
Sbjct: 149 DNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSLGDQFTLILSDDGNVYSVGLNKK 208

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LG+          ++  E + + I  L+ + ++I + G   S  +D +G ++ +G   
Sbjct: 209 GILGYET--------KNAEELSFKQISNLKNI-IQIDS-GTDFSVALDSDGNMFAWGSNY 258

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             ++     +  + P  I  LP  ++  CG      L++ G LYTWG   +G LG  S  
Sbjct: 259 FGQLGTPSPSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGFGGDGQLGTPSKQ 318

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
            + +P ++     +  +D+VSCG  H   IS  K+   G G              GQLG 
Sbjct: 319 DIPTPHKIS---FDHNIDKVSCGQAHVGIISNNKLYMHGRGKE------------GQLGR 363

Query: 387 GNDVDYIH-----PTIVNFGENVKALQVSCGFNHTGALLE 421
           G++ +  +     P +V   ENV  L+++CG +H+ A++ 
Sbjct: 364 GSETESPNSSRYSPLLV--LENV--LKIACGGSHSFAIVN 399



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 33/351 (9%)

Query: 27  CKRWISSTLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           CK  +S+ + +      WG   +G LG G +E+   P +    +    K +ACG  H   
Sbjct: 67  CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAA 126

Query: 86  LTETGCVYATGLNDFGQLGIS----------------ENIGYSLEPLRISGLKKEVVQIS 129
           +T  G +Y  G  D G+LG S                +N+G +  P  +  L  +V Q+S
Sbjct: 127 ITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLP-ELVKLNFKVHQVS 185

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G   +  ++ DG +Y  G N  G LG   K A+ +    ++  L  I   Q   G + S
Sbjct: 186 LGDQFTLILSDDGNVYSVGLNKKGILGYETKNAEELSF-KQISNLKNII--QIDSGTDFS 242

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA+   G + +WG+   G+LG    S I          TP+ IK L   K+K  + G   
Sbjct: 243 VALDSDGNMFAWGSNYFGQLGTPSPSVI---------QTPQQIKGLP--KIKQFSCGEQF 291

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
              +  +G +Y +G     ++          P  IS     ++V CG  H  ++ S  +L
Sbjct: 292 IGALSADGVLYTWGFGGDGQLGTPSKQDIPTPHKISFDHNIDKVSCGQAHVGII-SNNKL 350

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           Y  G  + G LG GS     +  R         V +++CG  H+ AI   K
Sbjct: 351 YMHGRGKEGQLGRGSETESPNSSRYSPLLVLENVLKIACGGSHSFAIVNQK 401


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 178/373 (47%), Gaps = 38/373 (10%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + ++ +   ++ ++CG  H   +T+ G V++ G  D G+LG   ++G  L P  I  L
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 317

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
               V  I+ G  H+ A+ + GEL+ WG+ ++       +  +    P K+   L G+  
Sbjct: 318 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 377

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            + A G   +  ++  G++ ++G G  G LGHG  SS+           P+ ++ L+G++
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 428

Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           VK  A G  H+A I E          +G+++ +GD    K+   +      P+ +  L  
Sbjct: 429 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 488

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
           S+  +V C    T  LT  G ++T GS E+G LG   +D   S   V+GP     V ++S
Sbjct: 489 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREIS 547

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
            G  H A ++  GK+ TWG G            + GQLG GN VD   PT+V   E+ + 
Sbjct: 548 SGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVEALEDKQV 595

Query: 407 LQVSCGFNHTGAL 419
             ++CG N T A+
Sbjct: 596 DSIACGSNFTVAV 608



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 142/334 (42%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D GRLG         P +  +     +KA+A G  HT  L  +G ++  G      
Sbjct: 292 WGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS- 350

Query: 103 LGISENIGYSLE--PLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG+ ++     +  P ++ G  +   VV+++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 351 LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 410

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
             ++  +  P +VE L G+  K  A G   + A+             GK+ +WG    G+
Sbjct: 411 DTSS--VARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 468

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  +K L        +     +  +   G V+  G +   
Sbjct: 469 LGHSDKESKL---------VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 519

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    G+H    S I       K  +  E+  G  H  VLT  G+++TWG    G LG+
Sbjct: 520 QL----GSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGL 575

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G+     SP  V+    +  VD ++CG   T A+
Sbjct: 576 GNYVDRSSPTLVEA-LEDKQVDSIACGSNFTVAV 608



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 140/339 (41%), Gaps = 46/339 (13%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N F  L +++ I    +   I+ + K  ++ S G H +       ++++WG      L  
Sbjct: 195 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 248

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              +   + +P  +     +  +  + G + +  VT  G+V SWG    GRLGH     +
Sbjct: 249 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 308

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           L          P++I+ L    VK  A G  H+  +  +G ++ +G+     +   +   
Sbjct: 309 LH---------PKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGE-GTHSLGVWDDQC 358

Query: 278 ARRPSLISKL--PYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            R      KL  P       ++ CG +HT +++S G+L+T+G    G LG G    +  P
Sbjct: 359 QRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP 418

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-----------GKILTWGWGGSHGTFSEDGHSS 380
           + V+       V  V+CG  HTAAI E           GK+ TW            G + 
Sbjct: 419 KEVES-LKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW------------GDAD 465

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G+LGH +    + PT V    +    QVSC    T AL
Sbjct: 466 RGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVAL 504



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRL+   + + V+  + G  H+A + + G V+ +G     ++  +       P +I  L 
Sbjct: 259 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA 318

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPV 343
           ++  + +  G  HTC L   GEL+ WG   +  LG+       S   P ++ GP     V
Sbjct: 319 FTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSV 377

Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +++CG  HTA IS  G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 378 VKMACGQWHTAIISSSGQLFTYG----DGTF--------GVLGHGDTSSVARPKEVESLK 425

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++   V+CG  HT A++E +
Sbjct: 426 GLRVKAVACGPWHTAAIVEIL 446


>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
 gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 2290

 Score =  124 bits (310), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 84/276 (30%), Positives = 128/276 (46%), Gaps = 44/276 (15%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLN---------------------DFGQLGISEN 108
           K  +K ++CG  HTL +T+ G ++  G+                        GQLG +EN
Sbjct: 267 KDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLG-NEN 325

Query: 109 IGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
                EP  +    K++ +Q++ G  HS A+T +G+++ WGKN+ GQLG G +  ++ P 
Sbjct: 326 FVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPT 385

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
              +E    +       G + S  ++   ++ +WG G   RLGHG          +T E 
Sbjct: 386 MIIIE----VMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGV---------TTDEL 432

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            P+ +  LE V V   + G  H+  I   G VY +GD    K+  QE N +        L
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKS--------L 484

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                V  GG H+  LT  G LY+WGS++ G LGIG
Sbjct: 485 HLPTRVSAGGLHSMALTDQGILYSWGSSKGGVLGIG 520



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 27/217 (12%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG  +  + + P     + K     +ACG +H++ LT+ G ++  G N  GQLG    
Sbjct: 319 GQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNTRGQLG---- 374

Query: 109 IGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            G+  + L+ + +  EV+   I +G  HS+ I+ + ELY WG     +LG G    ++  
Sbjct: 375 QGHRNDQLKPTMIIIEVMATSICSGDQHSAFISDEKELYTWGNGQYFRLGHGVTTDEL-- 432

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            P KV  L  ++    + G   ++A+T  G V +WG G SG+LG  QE+       + S 
Sbjct: 433 YPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN-------NKSL 484

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           + P  +           +AG LHS  + + G +Y +G
Sbjct: 485 HLPTRV-----------SAGGLHSMALTDQGILYSWG 510



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 12/140 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG Y RLG G       P      E   +  ++CG  HTL +T  G VYA G    G+
Sbjct: 415 WGNGQYFRLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGK 474

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--KK 160
           LG+ EN      P R+S           G  HS A+T  G LY WG +  G LG+G  + 
Sbjct: 475 LGVQENNKSLHLPTRVSA----------GGLHSMALTDQGILYSWGSSKGGVLGIGFQRD 524

Query: 161 AAKVIPIPTKVECLSGIFTK 180
                 +P K+  ++ I +K
Sbjct: 525 NKDCYSLPQKIRTVAKIQSK 544



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 72/284 (25%), Positives = 106/284 (37%), Gaps = 76/284 (26%)

Query: 195 GGKVLSWGAGGSGRLGHGQES-----------------------------------SILG 219
           G K++ WG   SGRLG  +E+                                   +   
Sbjct: 192 GQKLIVWGISDSGRLGLRKETLEIKQKNKVRRRGQKQQENTSESEQEDDDQFQKNENAQS 251

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF------- 272
           F+RS    T   I E     +K  + G  H+  I + G ++ FG     K+         
Sbjct: 252 FVRSYVNKTE--INEEIKDGIKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLL 309

Query: 273 ----------QEGN----HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
                     Q GN    +   P+ +   P  +  +V CG  H+  LT  G+++TWG N 
Sbjct: 310 LQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIFTWGKNT 369

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSE 375
            G LG G  +    P  +     E     +  G +H+A IS E ++ TWG G        
Sbjct: 370 RGQLGQGHRNDQLKPTMI---IIEVMATSICSGDQHSAFISDEKELYTWGNGQYF----- 421

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  +LGHG   D ++P  V   E+V    VSCG  HT A+
Sbjct: 422 -------RLGHGVTTDELYPKKVVVLEDVYVTHVSCGMTHTLAI 458



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 25/202 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G    + +P +     +    ++  G  H+ F+++   +Y  G   + +
Sbjct: 365 WGKNTRGQLGQGHRNDQLKPTMI--IIEVMATSICSGDQHSAFISDEKELYTWGNGQYFR 422

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG        L P ++  L+   V  +S G  H+ AIT +G +Y WG   +G+LG+ ++ 
Sbjct: 423 LGHGVTTD-ELYPKKVVVLEDVYVTHVSCGMTHTLAITNEGFVYAWGDGMSGKLGV-QEN 480

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K + +PT+V           + G   S+A+T  G + SWG+   G LG       +GF 
Sbjct: 481 NKSLHLPTRV-----------SAGGLHSMALTDQGILYSWGSSKGGVLG-------IGFQ 522

Query: 222 RSTSE-YT-PRLIKELEGVKVK 241
           R   + Y+ P+ I+ +  ++ K
Sbjct: 523 RDNKDCYSLPQKIRTVAKIQSK 544



 Score = 48.9 bits (115), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 14/166 (8%)

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
           P  I   K +++ +S  Y H+ AI+  G  Y WG N   QLGLG    K   IP K++  
Sbjct: 781 PFLIPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLG-YMCKYNHIPQKIQ-- 837

Query: 175 SGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             + TK+  +       S  +T  G++ ++G   SG LGH +++  +      SE  P++
Sbjct: 838 GALETKRIIMSTCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYV-----VSE--PKM 890

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           I ++  + + +A+      A  ++  ++Y +G+    ++  Q  N+
Sbjct: 891 INDIPPM-IFLASGPQGMMAITEQKRQIYAWGNNLYGQLGIQITNN 935



 Score = 48.9 bits (115), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 5/144 (3%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQI 128
           K+ +  ++C   H + ++  G  Y+ G N + QLG+     Y+  P +I G L+ + + +
Sbjct: 788 KNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETKRIIM 847

Query: 129 STGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           ST     SA+  D GE++ +G + +G LG  +K   V+  P  +  +  +     A G +
Sbjct: 848 STCSDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIF--LASGPQ 905

Query: 188 QSVAVTGGGK-VLSWGAGGSGRLG 210
             +A+T   + + +WG    G+LG
Sbjct: 906 GMMAITEQKRQIYAWGNNLYGQLG 929



 Score = 45.4 bits (106), Expect = 0.051,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+  Y +LGLG +  ++  +   +  A E   +    C    +  LT+ G ++  G +D
Sbjct: 813 WGSNKYYQLGLGYM-CKYNHIPQKIQGALETKRIIMSTCSDRFSALLTDKGEIWTFGTSD 871

Query: 100 FGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
            G LG  E   Y + EP  I+ +   ++ +++G     AIT    ++Y WG N  GQLG+
Sbjct: 872 SGVLGHDEKNYYVVSEPKMINDIPP-MIFLASGPQGMMAITEQKRQIYAWGNNLYGQLGI 930



 Score = 42.7 bits (99), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 20/121 (16%)

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSES 341
           +PY +  +    C   H   ++  G  Y+WGSN+   LG+G +    H P+++QG     
Sbjct: 784 IPYFKNKIIFMSCSYTHAIAISHKGVAYSWGSNKYYQLGLGYMCKYNHIPQKIQGALETK 843

Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI--HPTIV 398
            +   +C  + +A +++ G+I T+            G S  G LGH     Y+   P ++
Sbjct: 844 RIIMSTCSDRFSALLTDKGEIWTF------------GTSDSGVLGHDEKNYYVVSEPKMI 891

Query: 399 N 399
           N
Sbjct: 892 N 892



 Score = 40.4 bits (93), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 61/140 (43%), Gaps = 10/140 (7%)

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           +  ++A++  G   SWG+    +LG       LG++   +    ++   LE  ++ ++  
Sbjct: 798 YTHAIAISHKGVAYSWGSNKYYQLG-------LGYMCKYNHIPQKIQGALETKRIIMSTC 850

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVL 303
               SA + + G ++ FG      +   E N+     P +I+ +P    +  G      +
Sbjct: 851 SDRFSALLTDKGEIWTFGTSDSGVLGHDEKNYYVVSEPKMINDIPPMIFLASGPQGMMAI 910

Query: 304 TSGG-ELYTWGSNENGCLGI 322
           T    ++Y WG+N  G LGI
Sbjct: 911 TEQKRQIYAWGNNLYGQLGI 930



 Score = 40.0 bits (92), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTF---------SEDGHSSGGQLGHGNDVDY 392
           +  VSCG  HT  I+ +G I  +G G     F                 GQLG+ N V+ 
Sbjct: 270 IKHVSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNV 329

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             PT +      K +QV+CG +H+ AL +
Sbjct: 330 YEPTELLVWPKRKFIQVACGSSHSMALTD 358


>gi|159039899|ref|YP_001539152.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918734|gb|ABW00162.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 554

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 166/383 (43%), Gaps = 32/383 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG LG GS      PVV S     ++ A+A GG H+L LT  G V A G ND GQ
Sbjct: 61  WGQNDYGELGNGSTAGSNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGRNDHGQ 120

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +   +EP+ +       V  I+ G  H+ A+T  G +  WG+N  GQLG G   
Sbjct: 121 LGDGSTVDK-VEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQLGDGSTV 179

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K+ P+   V+  +G      A G + ++A+T  G V +WG+  SG LG G         
Sbjct: 180 DKLEPV--SVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGELGDG--------- 228

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    TP L+            AG  HS  +     V+ +GD + D  L    N  +  
Sbjct: 229 TTIDRTTPILVGLPG--TTVTTTAGGGHSFAVTSADTVHAWGDNS-DGQLGNGNNVDQLE 285

Query: 282 SLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            ++  +P    V     G  H+  LT+ G L  WG+N+ G LG G+      P  V  P 
Sbjct: 286 PVVVSMPLGATVTAIAGGNDHSLALTAAGALLAWGNNDVGQLGNGNTLDQSEPVDVNLPT 345

Query: 339 SESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             +     +    H+ A++  G +L W            G +  G+LG G+ +D   P  
Sbjct: 346 GTTITAIATRDSDHSLALTAAGSVLAW------------GENDDGELGDGSTLDRSEPVD 393

Query: 398 VNFGENVKALQVSCGFNHTGALL 420
           VN         ++ G  H+ AL+
Sbjct: 394 VNLPTGTTVTAIAAGDGHSLALV 416



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 138/312 (44%), Gaps = 27/312 (8%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            + A G ND+G+LG     G S  P+ +S      V  ++ G  HS A+T  G +  WG+
Sbjct: 57  TILAWGQNDYGELGNGSTAG-SNTPVVVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLG G    KV P+   V+  +G      A G + ++A+T  G VL+WG    G+L
Sbjct: 116 NDHGQLGDGSTVDKVEPV--SVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWGRNHRGQL 173

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G G          +  +  P  +    G  V   A G  H+  I   G V+ +G  +  +
Sbjct: 174 GDGS---------TVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVL 328
           +          P L+     +     GG H+  +TS   ++ WG N +G LG G ++D L
Sbjct: 225 LGDGTTIDRTTPILVGLPGTTVTTTAGGGHSFAVTSADTVHAWGDNSDGQLGNGNNVDQL 284

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
             P  V  P   + V  ++ G  H+ A++    L   W          G++  GQLG+GN
Sbjct: 285 E-PVVVSMPLGAT-VTAIAGGNDHSLALTAAGALL-AW----------GNNDVGQLGNGN 331

Query: 389 DVDYIHPTIVNF 400
            +D   P  VN 
Sbjct: 332 TLDQSEPVDVNL 343



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 115/277 (41%), Gaps = 31/277 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG+N  G+LG G  A    P+   V   S       A G + S+A+T  G VL+WG 
Sbjct: 58  ILAWGQNDYGELGNGSTAGSNTPV--VVSLPSATTVTAVAGGGDHSLALTSAGTVLAWGR 115

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG G          +  +  P  +    G  V   A G  H+  +   G V  +G
Sbjct: 116 NDHGQLGDGS---------TVDKVEPVSVDFPAGTTVTAIAGGDDHNLALTSAGTVLAWG 166

Query: 264 DRAVDKMLFQEGNHARRPSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGC 319
                +    +G+   +   +S   P    V     G  H   +TS G ++TWGSN +G 
Sbjct: 167 RN--HRGQLGDGSTVDKLEPVSVDFPAGTTVTAIAGGDDHNLAITSTGGVFTWGSNSSGE 224

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
           LG G+     +P  V  P +       + G  H+ A++    +   W          G +
Sbjct: 225 LGDGTTIDRTTPILVGLPGTTV---TTTAGGGHSFAVTSADTV-HAW----------GDN 270

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S GQLG+GN+VD + P +V+         ++ G +H+
Sbjct: 271 SDGQLGNGNNVDQLEPVVVSMPLGATVTAIAGGNDHS 307


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 21/231 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G  ++   P    A EK      A GG H+L LTE   VYA G N FGQ
Sbjct: 76  WGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQ 135

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+   + YS  P  +S L++  V  I+ GY HS A+    +LY WG+N  GQLGLG   
Sbjct: 136 LGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYR 195

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----GGG-----KVLSWGAGGSGRLGHG 212
           +   P+P  +        +Q + G++ ++A      G G     KV +WG G  G+LGH 
Sbjct: 196 SS--PVPEHLTMFKKSQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +           S   P++++ L    ++  AAG   SA IDE  ++Y +G
Sbjct: 254 E---------LYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWG 295



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 129/288 (44%), Gaps = 37/288 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAAL 184
           V  + G  H+ A+T +G +Y WG  +NG LG G   ++++P       +  + +    A 
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIAC 59

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++AV   G + +WG    G+LGHG            +   PR ++ LE      AA
Sbjct: 60  GEFHTLAVGQDGTLWTWGRNQYGQLGHGD---------CKTHKLPRRVEALEKKICIKAA 110

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           AG  HS  + E  +VY FG     ++ L  +  ++  P ++S+L  S    + CG  H+ 
Sbjct: 111 AGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSM 170

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-ISE-- 358
            L    +LY+WG N+ G LG+G       PE +   F +S V Q+SCG+ H  A +SE  
Sbjct: 171 ALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQISCGYDHNIAFVSEYA 229

Query: 359 -------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
                   K+ TWG G              GQLGH        P +V 
Sbjct: 230 GPGVPPLEKVYTWGRG------------EEGQLGHDELYSRCVPKVVQ 265



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 149/332 (44%), Gaps = 45/332 (13%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKEVVQISTGY 132
           ACG  HT+ LTE G VY+ G  + G LG     S+ +  +L+   I  +   +  I+ G 
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALDRPLIYSMP-SITTIACGE 61

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+ A+  DG L+ WG+N  GQLG G    K   +P +VE L      +AA G + S+ +
Sbjct: 62  FHTLAVGQDGTLWTWGRNQYGQLGHGD--CKTHKLPRRVEALEKKICIKAAAGGQHSLVL 119

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHS 250
           T   KV ++G+   G+LG          L S  +Y+  P ++  L    V     G+ HS
Sbjct: 120 TEANKVYAFGSNVFGQLG----------LESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG-- 306
             + ++ ++Y +G     ++       +  P  ++    S  +++ CG  H     S   
Sbjct: 170 MALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSEYA 229

Query: 307 -------GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
                   ++YTWG  E G LG   +     P+ VQ   +   +  V+ G   +AAI E 
Sbjct: 230 GPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARG-IRAVAAGGFSSAAIDEA 288

Query: 360 KIL-TWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           K L TWG             S  GQLGHG+D+
Sbjct: 289 KQLYTWGC------------SREGQLGHGDDI 308



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 111/251 (44%), Gaps = 33/251 (13%)

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGV 238
           AA G   +VA+T  G+V SWG   +G LGHG          S S+  P+ +         
Sbjct: 3   AACGKLHTVALTEEGRVYSWGCA-NGALGHGN---------SKSQLLPKALDRPLIYSMP 52

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC--- 295
            +   A G  H+  + ++G ++ +G     ++   +    + P  +  L   E+ +C   
Sbjct: 53  SITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEAL---EKKICIKA 109

Query: 296 --GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             GG H+ VLT   ++Y +GSN  G LG+ S     +   +      S V  ++CG+ H+
Sbjct: 110 AAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHS 169

Query: 354 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            A+ + + L + W          G +  GQLG G+      P  +   +  +  Q+SCG+
Sbjct: 170 MALLKSEQL-YSW----------GRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGY 218

Query: 414 NHTGALL-EYV 423
           +H  A + EY 
Sbjct: 219 DHNIAFVSEYA 229



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG   L SR  P V        ++A+A GG  +  + E   +Y  G +  GQ
Sbjct: 242 WGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREGQ 301

Query: 103 LGISENI 109
           LG  ++I
Sbjct: 302 LGHGDDI 308


>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
           2-like [Saccoglossus kowalevskii]
          Length = 1049

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 177/390 (45%), Gaps = 46/390 (11%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           + + LQR   + WG   YG+LGLG  + + +P          +  +  GG HTL LT+ G
Sbjct: 19  VGTCLQRGMFS-WGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGGGGHTLLLTDCG 77

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
            +Y+ G N  GQLG+      S+   RI  L   V++++ G+    AIT  G+LY WG N
Sbjct: 78  AIYSCGWNSKGQLGLGHTDNLSVFK-RIDHL-PPVIKVTCGWDFCLAITEVGDLYAWGCN 135

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG+  +      IPTK++  S   T  AA G   S+AVT  GK+ SWG+   G+LG
Sbjct: 136 VFGQLGI-PEIDSFTAIPTKIQIFSRNVTSIAA-GLRHSLAVTNDGKLWSWGSARKGQLG 193

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH--SACIDENGRVYIFGDRAVD 268
           + Q  +    L    +  P+ + +LE +    + +      +AC    G +Y++G    +
Sbjct: 194 NDQSKTGYQLL----QRVPKQVHKLENISSVSSGSYHSTALTAC----GNMYLWGSNKHN 245

Query: 269 KM------LFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWG 313
           ++      + Q G  ++   L      + E         V  G  H   +T    ++ WG
Sbjct: 246 QLTNSVQGVVQSGGSSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWG 305

Query: 314 SNENGCLGIGSIDVLHSPERVQGP---FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
            N+   LGI       + + V  P        + Q++CG +H  A+S + K+L WGW   
Sbjct: 306 RNDYSQLGISLTGNNCAKKDVTKPKELVILKDIKQIACGSEHNLALSDDNKVLAWGW--- 362

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
                    +  G  G+G + + + P +++
Sbjct: 363 ---------NEHGSCGNGKEENVLTPQVID 383


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 179/379 (47%), Gaps = 41/379 (10%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G      V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 402
            QV+CG  HT  ++E  +  +G G              GQLG G  + +   P I++  +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331

Query: 403 NVKALQVSCGFNHTGALLE 421
           + K   +SCG NHT  + +
Sbjct: 332 DQKISHISCGENHTALMTD 350



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 158/359 (44%), Gaps = 41/359 (11%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+      L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+
Sbjct: 70  FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVK 128

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
           ++  G +H+   T  G +Y  G N+ GQLGLG    +            G FT     KQ
Sbjct: 129 LAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQ 182

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  GK+  WG    G++G   +S++           P  +    G  + 
Sbjct: 183 LSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPIS 231

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGG 297
             + G+ HSA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG
Sbjct: 232 WISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGG 290

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            HT VLT    +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++
Sbjct: 291 GHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMT 349

Query: 358 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + G + T+G  G HG            LG  N  +   PT+ +         ++CG  H
Sbjct: 350 DIGLMYTFG-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 45/252 (17%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V       P+  +SCG+ H+A
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT---VGKPISWISCGYYHSA 241

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSC 411
            ++ +G++ T+G                G+LG  N   +++  P  V  G   K +QV+C
Sbjct: 242 FVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPDKVIQVAC 288

Query: 412 GFNHTGALLEYV 423
           G  HT  L E V
Sbjct: 289 GGGHTVVLTEKV 300


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 178/373 (47%), Gaps = 38/373 (10%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + ++ +   ++ ++CG  H   +T+ G V++ G  D G+LG   ++G  L P  I  L
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV-LHPKIIESL 252

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFT 179
               V  I+ G  H+ A+ + GEL+ WG+ ++       +  +    P K+   L G+  
Sbjct: 253 AFTHVKAIAFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSV 312

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            + A G   +  ++  G++ ++G G  G LGHG  SS+           P+ ++ L+G++
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVA---------RPKEVESLKGLR 363

Query: 240 VKIAAAGFLHSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           VK  A G  H+A I E          +G+++ +GD    K+   +      P+ +  L  
Sbjct: 364 VKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 423

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
           S+  +V C    T  LT  G ++T GS E+G LG   +D   S   V+GP     V ++S
Sbjct: 424 SDFAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDD-SSICSVEGPLKTEFVREIS 482

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
            G  H A ++  GK+ TWG G            + GQLG GN VD   PT+V   E+ + 
Sbjct: 483 SGSSHVAVLTMNGKVFTWGKG------------TEGQLGLGNYVDRSSPTLVEALEDKQV 530

Query: 407 LQVSCGFNHTGAL 419
             ++CG N T A+
Sbjct: 531 DSIACGSNFTVAV 543



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 142/334 (42%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D GRLG         P +  +     +KA+A G  HT  L  +G ++  G      
Sbjct: 227 WGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGEGTHS- 285

Query: 103 LGISENIGYSLE--PLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG+ ++     +  P ++ G  +   VV+++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 286 LGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHG 345

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
             ++  +  P +VE L G+  K  A G   + A+             GK+ +WG    G+
Sbjct: 346 DTSS--VARPKEVESLKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGK 403

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  +K L        +     +  +   G V+  G +   
Sbjct: 404 LGHSDKESKL---------VPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    G+H    S I       K  +  E+  G  H  VLT  G+++TWG    G LG+
Sbjct: 455 QL----GSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGL 510

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G+     SP  V+    +  VD ++CG   T A+
Sbjct: 511 GNYVDRSSPTLVEA-LEDKQVDSIACGSNFTVAV 543



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 140/339 (41%), Gaps = 46/339 (13%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N F  L +++ I    +   I+ + K  ++ S G H +       ++++WG      L  
Sbjct: 130 NSFQDLTVADTI----KEQGITQMPK--LKPSEGSHVAYGTDSLKDIFVWGDVLGSVLDD 183

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              +   + +P  +     +  +  + G + +  VT  G+V SWG    GRLGH     +
Sbjct: 184 RDTSKANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGV 243

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           L          P++I+ L    VK  A G  H+  +  +G ++ +G+     +   +   
Sbjct: 244 LH---------PKIIESLAFTHVKAIAFGAKHTCALAISGELFEWGE-GTHSLGVWDDQC 293

Query: 278 ARRPSLISKL--PYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            R      KL  P       ++ CG +HT +++S G+L+T+G    G LG G    +  P
Sbjct: 294 QRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGDGTFGVLGHGDTSSVARP 353

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-----------GKILTWGWGGSHGTFSEDGHSS 380
           + V+       V  V+CG  HTAAI E           GK+ TW            G + 
Sbjct: 354 KEVES-LKGLRVKAVACGPWHTAAIVEILGTVKSNAPSGKLFTW------------GDAD 400

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G+LGH +    + PT V    +    QVSC    T AL
Sbjct: 401 RGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVAL 439



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRL+   + + V+  + G  H+A + + G V+ +G     ++  +       P +I  L 
Sbjct: 194 PRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLA 253

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS---PERVQGPFSESPV 343
           ++  + +  G  HTC L   GEL+ WG   +  LG+       S   P ++ GP     V
Sbjct: 254 FTHVKAIAFGAKHTCALAISGELFEWGEGTHS-LGVWDDQCQRSQWYPHKLFGPLEGVSV 312

Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +++CG  HTA IS  G++ T+G     GTF        G LGHG+      P  V   +
Sbjct: 313 VKMACGQWHTAIISSSGQLFTYG----DGTF--------GVLGHGDTSSVARPKEVESLK 360

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++   V+CG  HT A++E +
Sbjct: 361 GLRVKAVACGPWHTAAIVEIL 381


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/338 (31%), Positives = 155/338 (45%), Gaps = 34/338 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+ E   RP +  +    ++  +ACG  HT  +T TG +Y    G  + 
Sbjct: 101 WGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++G+ + P RISG  +  +V  +S G  H++ IT  G+L+ +G  S G LG G
Sbjct: 161 GLLGHGNDVGHWI-PKRISGALEGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
               K +  P +VE LSG+ T   A G   + A+                GK+ +WG G 
Sbjct: 220 D--LKSVSYPREVESLSGLKTIAVACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGD 277

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG + + L          P  +  L        A G   +  +  +G+V   G+ 
Sbjct: 278 KHRLGHGDKETRL---------KPTCVATLIDHDFYRVACGHSLTVALTTSGQVLSMGN- 327

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
           AV   L    +  R P L+      E+V+   CG YH  VLT+  E++TWG   NG LG 
Sbjct: 328 AVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGSYHVAVLTNRSEVFTWGKGANGRLGH 387

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           G  +    P  V+    +  V  ++CG   TAAI + K
Sbjct: 388 GDTEDRKVPTLVEA-LKDRAVRYIACGANFTAAICQYK 424



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 162/369 (43%), Gaps = 53/369 (14%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           CG  H   + + G V+  G +  G+LG    E+    + P  +  L    V  ++ G  H
Sbjct: 84  CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDC---VRPRLVESLTVSNVDFVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  +   G LG G      IP   ++   L G+     + G   +  
Sbjct: 141 TCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIP--KRISGALEGLQVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG        L+S S   PR ++ L G+K    A G  H+A
Sbjct: 199 ITSMGQLFTFGDGSFGVLGHGD-------LKSVS--YPREVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVV 294
            I E              G+++ +GD   DK     G+   R  P+ ++ L   +   V 
Sbjct: 250 AIVEVIVTRSSSSVKLSAGKLFTWGDG--DKHRLGHGDKETRLKPTCVATLIDHDFYRVA 307

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G++ + G+   G LG    D    P  V+       V Q++CG  H A
Sbjct: 308 CGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDG-RIPCLVEDKIVGEQVLQIACGSYHVA 366

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++   ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG 
Sbjct: 367 VLTNRSEVFTWGKGAN------------GRLGHGDTEDRKVPTLVEALKDRAVRYIACGA 414

Query: 414 NHTGALLEY 422
           N T A+ +Y
Sbjct: 415 NFTAAICQY 423



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 95/184 (51%), Gaps = 19/184 (10%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G  H+A + +NG V+ +G+ +  ++         RP L+  L  S  + V CG +HTC +
Sbjct: 85  GVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCAV 144

Query: 304 TSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
           T+ GELYTWG  +   G LG G+ DV H  P+R+ G      V  VSCG  HTA I S G
Sbjct: 145 TTTGELYTWGDGTYNVGLLGHGN-DVGHWIPKRISGALEGLQVAYVSCGTWHTALITSMG 203

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ T+G G            S G LGHG+     +P  V     +K + V+CG  HT A+
Sbjct: 204 QLFTFGDG------------SFGVLGHGDLKSVSYPREVESLSGLKTIAVACGVWHTAAI 251

Query: 420 LEYV 423
           +E +
Sbjct: 252 VEVI 255


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 155/340 (45%), Gaps = 48/340 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  HT  +T +G +Y    G  ++
Sbjct: 356 WGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNY 415

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 416 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 474

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +A+ G   + AV               GK+ +WG G  
Sbjct: 475 DR--KSVSLPREVESLKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK 532

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG + + L          P  +  +E    ++A    L +  +  +G VY  G   
Sbjct: 533 GRLGHGDKEAKL---------VPTCVALVEHNFCQVACGHSL-TVALTTSGHVYAMGS-- 580

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    KLP          + EE+ CG YH  VLT   E+YTWG   
Sbjct: 581 --PVYGQLGN----PQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGA 634

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  D  ++P  V     +  V  ++CG   TAAI
Sbjct: 635 NGRLGHGDTDDRNNPTLVDA-LKDKHVKSIACGTNFTAAI 673



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 181/369 (49%), Gaps = 51/369 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G +++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 334 VQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDV---LHPKLIDALSNTNIELVA 390

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +H+ A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 391 CGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 448

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   A+ G
Sbjct: 449 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTMRASCG 499

Query: 247 FLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE- 291
             H+A + E            +G+++ +GD   DK     G+   +  P+ ++ + ++  
Sbjct: 500 VWHTAAVVEVMVGNSSSSNCSSGKLFTWGDG--DKGRLGHGDKEAKLVPTCVALVEHNFC 557

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CG   T  LT+ G +Y  GS   G LG    D    P RV+G   +S V++++CG  
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADG-KLPTRVEGKLLKSFVEEIACGAY 616

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           H A ++   ++ TWG G +            G+LGHG+  D  +PT+V+  ++     ++
Sbjct: 617 HVAVLTLRNEVYTWGKGAN------------GRLGHGDTDDRNNPTLVDALKDKHVKSIA 664

Query: 411 CGFNHTGAL 419
           CG N T A+
Sbjct: 665 CGTNFTAAI 673



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 125/282 (44%), Gaps = 43/282 (15%)

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           GLG K   + P    +E    +  +  A G   +  VT  G++ SWG    GRLGHG +S
Sbjct: 313 GLGVKIDSLFP--KALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDS 370

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
            +L          P+LI  L    +++ A G  H+  +  +G +Y +G+ A +  L   G
Sbjct: 371 DVL---------HPKLIDALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHG 421

Query: 276 NHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           N      P  ++   +  +   + CG +HT V+TS G+L+T+G    G LG G    +  
Sbjct: 422 NQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSL 481

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDG 377
           P  V+         + SCG  HTAA+ E             GK+ TWG G          
Sbjct: 482 PREVES-LKGLRTMRASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDK-------- 532

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               G+LGHG+    + PT V   E+    QV+CG + T AL
Sbjct: 533 ----GRLGHGDKEAKLVPTCVALVEH-NFCQVACGHSLTVAL 569



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G ++ +G+ +  ++     +    P LI  L 
Sbjct: 323 PKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALS 382

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YHTC +T  G+LYTWG+     G LG G+      P+RV GP     V 
Sbjct: 383 NTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 442

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   + 
Sbjct: 443 YISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPREVESLKG 490

Query: 404 VKALQVSCGFNHTGALLEYV 423
           ++ ++ SCG  HT A++E +
Sbjct: 491 LRTMRASCGVWHTAAVVEVM 510


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 177/382 (46%), Gaps = 45/382 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+L +R  PV         +  +A G  H+L L   G V+A G ND GQ
Sbjct: 118 WGRNDDGQLGDGTLSTRGDPVQVQGLS--GVTTVALGATHSLALCYDGSVWAWGANDHGQ 175

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +I     P  ++GL+ EVV ++ G +HS A+  DG ++ WG+N +GQLG G    
Sbjct: 176 LGDGTSIARR-TPQMVAGLQ-EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVT 233

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+P  ++ LSGI     A G   S+A+   G V +WG+  SG+LG G          
Sbjct: 234 RRVPVP--IQGLSGIVA--VASGTSHSLALRYDGNVWAWGSNYSGQLGDGS--------- 280

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           S S  +P  + EL G+ V +   G  +S  +  +G V+ +G     ++   +G    R  
Sbjct: 281 SLSRSSPVQVTELSGI-VSV-EGGPDYSMAVRYDGTVWTWGINTYGQL--GDGTTIARSV 336

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S L     V  G  H   + +   ++ WG N NG  G  S  V  SP  +      
Sbjct: 337 PVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTIL----- 391

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           + V  ++    H+ A+ S+G +  W WG ++           GQLG G   +   P  V 
Sbjct: 392 NEVVTMAATNDHSLAVRSDGGL--WAWGANN----------EGQLGDGTTKNRWAPAEV- 438

Query: 400 FGENVKALQVSCGFNHTGALLE 421
            G  V    V+ G  H+ A+ +
Sbjct: 439 LGNVVS---VAAGRRHSLAVRD 457



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 160/359 (44%), Gaps = 39/359 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS  SR  PV  +  E   + ++  G  +++ +   G V+  G+N +GQ
Sbjct: 268 WGSNYSGQLGDGSSLSRSSPVQVT--ELSGIVSVEGGPDYSMAVRYDGTVWTWGINTYGQ 325

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  S+ P++ SGL   VV ++ G  H+ A+  +  ++ WG N NGQ G   ++ 
Sbjct: 326 LGDGTTIARSV-PVQTSGLSG-VVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSV 383

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P     E ++   T       + S+AV   G + +WGA   G+LG G          
Sbjct: 384 YFSPRTILNEVVTMAATN------DHSLAVRSDGGLWAWGANNEGQLGDGT--------- 428

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + + + P    E+ G  V + AAG  HS  + ++G ++ +G   V ++    G+    P 
Sbjct: 429 TKNRWAP---AEVLGNVVSV-AAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPM 484

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  +     V  G  ++  L     L+ WG N  G LG G+    H P RVQG    S 
Sbjct: 485 QVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHVPTRVQG---LSG 541

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           +  ++ G  H  A+ S G +  W            G +S GQLG G  ++   P  V  
Sbjct: 542 IVAIATGNGHMLAVRSNGTVWAW------------GDNSSGQLGDGTTINRATPVQVQV 588



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 37/349 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+ ++RW P    A    ++ ++A G  H+L + + G ++A G N  GQ
Sbjct: 416 WGANNEGQLGDGTTKNRWAP----AEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQ 471

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       ++ P+++ G+   +  ++ G  +S A+  D  L+ WG+NS GQLG G    
Sbjct: 472 LGDGTGSSRTI-PMQVPGISG-IASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVN 529

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   +PT+V+ LSGI     A G    +AV   G V +WG   SG+LG G          
Sbjct: 530 R--HVPTRVQGLSGIVA--IATGNGHMLAVRSNGTVWAWGDNSSGQLGDGT--------- 576

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + +  TP  ++ L    +   AAG  HS  +  +G ++ +G     ++    G     P+
Sbjct: 577 TINRATPVQVQVLS--GIVAVAAGAAHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPT 634

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFS 339
            +  +  +  V    +H+  + + G L+ WG+N  G LG    +   +P +V    G   
Sbjct: 635 QVQGIGSAVAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTE 694

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
                  S G+ H+ A+ S+G ++ W            GH++ GQLG G
Sbjct: 695 AVGTFGYSIGFGHSLALRSDGYLVGW------------GHNTYGQLGTG 731



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 31/304 (10%)

Query: 68  FEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKK 123
           F   S +A   +A    ++L +   G V+  G        +S N  Y  + P ++ GL  
Sbjct: 41  FTLQSAQARDRIAASSMNSLAIRSDGTVWTVGTRY-----VSANGWYRQDWPGQLPGLSG 95

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +V I +G   S A+  DG ++ WG+N +GQLG G  + +  P+  +V+ LSG+ T   A
Sbjct: 96  -MVSIDSGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPV--QVQGLSGVTT--VA 150

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
           LG   S+A+   G V +WGA   G+LG G          S +  TP+++  L+  +V   
Sbjct: 151 LGATHSLALCYDGSVWAWGANDHGQLGDGT---------SIARRTPQMVAGLQ--EVVAV 199

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCV 302
           AAG  HS  +  +G V+ +G+   D  L       RR P  I  L     V  G  H+  
Sbjct: 200 AAGANHSLAVLSDGTVWAWGEN-YDGQLGDGTTVTRRVPVPIQGLSGIVAVASGTSHSLA 258

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
           L   G ++ WGSN +G LG GS     SP +V      S +  V  G  ++ A+  +G +
Sbjct: 259 LRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVT---ELSGIVSVEGGPDYSMAVRYDGTV 315

Query: 362 LTWG 365
            TWG
Sbjct: 316 WTWG 319



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 10/179 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV           A     AH+L +   G ++A G+N+  Q
Sbjct: 564 WGDNSSGQLGDGTTINRATPVQVQVLSGIVAVAAGA--AHSLAVRYDGTLWAWGINNTSQ 621

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   L P ++ G+   V  +S   HHS A+  DG L+ WG N+ GQLG  +   
Sbjct: 622 LGDGTGI-PRLVPTQVQGIGSAVA-VSAAKHHSLAVLADGTLWDWGANNYGQLG--RNQD 677

Query: 163 KVIPIPTKVECLSGIF----TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P P+KV  L+G+     T   ++GF  S+A+   G ++ WG    G+LG G   +I
Sbjct: 678 NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGTGVPENI 736



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +  +LG G+   R  P         S  A++    H+L +   G ++  G N++GQ
Sbjct: 614 WGINNTSQLGDGTGIPRLVPTQVQGI--GSAVAVSAAKHHSLAVLADGTLWDWGANNYGQ 671

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIST-----GYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG +++   +  P +++ L      + T     G+ HS A+  DG L  WG N+ GQLG 
Sbjct: 672 LGRNQD-NTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLGT 730

Query: 158 GKKAAKVIPIP 168
           G    + IP+P
Sbjct: 731 G--VPENIPVP 739


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 179/379 (47%), Gaps = 41/379 (10%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTL--FLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G      V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 402
            QV+CG  HT  ++E  +  +G G              GQLG G  + +   P I++  +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331

Query: 403 NVKALQVSCGFNHTGALLE 421
           + K   +SCG NHT  + +
Sbjct: 332 DQKISHISCGENHTALMTD 350



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 155/348 (44%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEVTV--GKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGGGHTVVLTE 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA +++ G + T+
Sbjct: 299 K-VVYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTF 357

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 358 G-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 45/252 (17%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V       P+  +SCG+ H+A
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT---VGKPISWISCGYYHSA 241

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSC 411
            ++ +G++ T+G                G+LG  N   +++  P  V  G   K +QV+C
Sbjct: 242 FVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPDKVIQVAC 288

Query: 412 GFNHTGALLEYV 423
           G  HT  L E V
Sbjct: 289 GGGHTVVLTEKV 300


>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 558

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 168/385 (43%), Gaps = 33/385 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS  +R  PV  S     ++ A+A G +H+L LT  G V A G N+FGQ
Sbjct: 62  WGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQ 121

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N+  S+ P+ ++      VV I+  + HS A+T  G +  WG N+ GQLG G   
Sbjct: 122 LGTGNNLNSSV-PITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNGNTF 180

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V    G      A G   S+A+T  G  L+WG            +  LG  
Sbjct: 181 NSNTPV--TVNLPPGTTVATIAAGTNHSLAITSTGAALAWGG---------NGNGQLGNN 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            + +   P  +       +   AAG  +S  I   G    +G  +  ++    GN+A   
Sbjct: 230 STATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQL--GTGNNADSL 287

Query: 281 -PSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P  ++  P +    +  G  H+  +TS G    WG N  G LGIG+     +P  V  P
Sbjct: 288 IPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLP 347

Query: 338 FSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
             ++ +     G+ H+  ++S G  L WG       FS       GQLG GN+ + + P 
Sbjct: 348 -PDTTITTNDGGFFHSLGSMSTGAALAWG-----NNFS-------GQLGTGNNTNSLDPI 394

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V      K   ++ G  H+ AL+ 
Sbjct: 395 AVALPSGTKITTIAAGGGHSLALVA 419



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 97/266 (36%), Gaps = 53/266 (19%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            +L+WGA   G+LG G          + +   P  +       V   A G  HS  +   
Sbjct: 58  TILAWGANNVGQLGDGS---------TIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSA 108

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--HTCVLTSGGELYTWGS 314
           G V  +G+    ++      ++  P  ++  P +  V       H+  LTS G +  WG+
Sbjct: 109 GAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIAASHGHSLALTSAGAVLAWGA 168

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW--------- 364
           N  G LG G+    ++P  V  P   + V  ++ G  H+ AI S G  L W         
Sbjct: 169 NNVGQLGNGNTFNSNTPVTVNLPPGTT-VATIAAGTNHSLAITSTGAALAWGGNGNGQLG 227

Query: 365 ------------------------GWGGSH-------GTFSEDGHSSGGQLGHGNDVDYI 393
                                     G S+       GT    G +S GQLG GN+ D +
Sbjct: 228 NNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLGTGNNADSL 287

Query: 394 HPTIVNFGENVKALQVSCGFNHTGAL 419
            P  V          ++ GF H+ A+
Sbjct: 288 IPIAVALPPGTTITSIAAGFTHSLAV 313


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 165/342 (48%), Gaps = 38/342 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLGLG  +   +P +  A    ++  +ACG  HT  +T  G +Y    G+++ 
Sbjct: 261 WGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDGELYTWGDGVHNA 320

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG+ +  +V  ++ G  H++ I+  G+L+ +G  + G LG G
Sbjct: 321 GLLGNGTDVSHWM-PKRISGILEGLQVAYVACGPWHTALISSTGQLFTFGDGTFGVLGHG 379

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K +  I  P +V+ L+G+ T   A G   + AV              GK+ +WG G   
Sbjct: 380 DKXS--ISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKN 437

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G    
Sbjct: 438 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSVY 488

Query: 268 DKMLFQEGN-HA--RRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
            ++    GN HA  ++P L+  KL    +EEV CG YH  VLTS  E+YTWG   NG LG
Sbjct: 489 GQL----GNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLG 544

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
            G ++   SP  V+    +  V  ++CG  ++AAI   K L+
Sbjct: 545 HGDVEDRKSPTLVES-LKDKHVKIIACGSNYSAAICLHKSLS 585



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 167/357 (46%), Gaps = 45/357 (12%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQ-ISTGYHHSSAIT 139
           H+  +T  G V+  G    G+LG+   +G  + +P  +  L    V  ++ G  H+ A+T
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLG--MGKDVTQPRLVEALAATTVDLVACGEFHTCAVT 305

Query: 140 VDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGG 196
           +DGELY WG   ++ G LG G   +  +P   ++   L G+     A G   +  ++  G
Sbjct: 306 MDGELYTWGDGVHNAGLLGNGTDVSHWMP--KRISGILEGLQVAYVACGPWHTALISSTG 363

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE- 255
           ++ ++G G  G LGHG + SI           PR +  L G++    A G  H+A + E 
Sbjct: 364 QLFTFGDGTFGVLGHGDKXSI---------SYPREVDSLTGLRTIAVACGVWHTAAVVEV 414

Query: 256 ----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHTCVL 303
                     +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG   T  L
Sbjct: 415 IMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGL 474

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
           T+ G+++T GS+  G LG    D    P  V+        ++V+CG  H   + S+ ++ 
Sbjct: 475 TTSGQVFTVGSSVYGQLGNPHADG-KQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVY 533

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           TWG G +            G+LGHG+  D   PT+V   ++     ++CG N++ A+
Sbjct: 534 TWGKGAN------------GRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 93/181 (51%), Gaps = 19/181 (10%)

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSG 306
           HSA +   G V+ +G+    ++    G    +P L+  L  +  + V CG +HTC +T  
Sbjct: 248 HSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMD 307

Query: 307 GELYTWGS--NENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
           GELYTWG   +  G LG G+ DV H  P+R+ G      V  V+CG  HTA IS  G++ 
Sbjct: 308 GELYTWGDGVHNAGLLGNGT-DVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           T+G     GTF        G LGHG+     +P  V+    ++ + V+CG  HT A++E 
Sbjct: 367 TFG----DGTF--------GVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEV 414

Query: 423 V 423
           +
Sbjct: 415 I 415


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  123 bits (309), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 96/320 (30%), Positives = 161/320 (50%), Gaps = 24/320 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G +G+LGLG   S+      + F ++  +  +  G+  HTL LT+ G VY+ G  +FG
Sbjct: 393 GKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDGEFG 452

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   N+     P  I G+ K +++  IS G  HS+AIT DG+LY WG+  +G+LG G 
Sbjct: 453 KLG-HGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEGEHGRLGHGD 511

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSIL 218
            + +   +PT V  +      Q A G   +V ++     V ++GAG +G+LGHG      
Sbjct: 512 SSIQ--RVPTLVRSIDA--ASQVAAGCSHTVVLSKDEMTVWTFGAGDNGKLGHGN----- 562

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               +  EY P+++  L+G+++K  AAG   S  +   G +Y++G      +   +  H 
Sbjct: 563 ----TKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAVHL 618

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQ 335
             P ++  L   +  ++  G  H   L++  E+Y+WG+N  G  G+G     +  P +V 
Sbjct: 619 -LPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHCFTPVSLPTKVL 677

Query: 336 GPFSESPVDQVSCGWKHTAA 355
                  ++Q+S G  H+ A
Sbjct: 678 A-LDGIKIEQISTGTSHSFA 696



 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 108/402 (26%), Positives = 187/402 (46%), Gaps = 52/402 (12%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           SS+L+   A  WG+    +L  G+ +    P    AF K++++ L  G   T  L + G 
Sbjct: 332 SSSLKHE-AYAWGSNSSHQLVEGNKDKILTPKKNDAF-KNAIQ-LEAGQYCTFALFDDGS 388

Query: 92  VYATGLNDFGQLGISENIGYSLEPL-RISGLKKEVVQISTGY---HHSSAITVDGELYMW 147
           ++A G    G+LG+ ++   S + L +++   + + QIS+      H+ A+T +G +Y W
Sbjct: 389 LHACGKGSHGKLGLGDS--SSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSW 446

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGGKVLSWGA 203
           G    G+LG G  A + +P     + + G+F  Q     + G   S A+T  G + +WG 
Sbjct: 447 GDGEFGKLGHGNVATQKLP-----KVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGE 501

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG-RVYIF 262
           G  GRLGHG +SSI        +  P L++ ++       AAG  H+  + ++   V+ F
Sbjct: 502 GEHGRLGHG-DSSI--------QRVPTLVRSIDAASQ--VAAGCSHTVVLSKDEMTVWTF 550

Query: 263 GDRAVDKMLFQEGNHARR--PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           G  A D      GN      P ++  L     +++  G   +  LT  G +Y WG     
Sbjct: 551 G--AGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGP-- 606

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           CLG+G+ D +H   ++     +  +  +S G  H  A+S + ++ +W            G
Sbjct: 607 CLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSW------------G 654

Query: 378 HSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGA 418
           +++ GQ G G+    +  PT V   + +K  Q+S G +H+ A
Sbjct: 655 NNNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSFA 696



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 50/341 (14%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           YA G N   QL +  N    L P +    K   +Q+  G + + A+  DG L+  GK S+
Sbjct: 340 YAWGSNSSHQL-VEGNKDKILTPKKNDAFKN-AIQLEAGQYCTFALFDDGSLHACGKGSH 397

Query: 153 GQLGLGKKAAKVIPIPTKVECLS--GIFTKQ-----AALGFE-QSVAVTGGGKVLSWGAG 204
           G+LGLG  ++K        +CL    +F +      ++ G +  ++A+T  G V SWG G
Sbjct: 398 GKLGLGDSSSK--------QCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGVVYSWGDG 449

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV----KVKIAAAGFLHSACIDENGRVY 260
             G+LGHG  +            T +L K + GV     +   +AG  HSA I ++G +Y
Sbjct: 450 EFGKLGHGNVA------------TQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLY 497

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG-ELYTWGSNENGC 319
            +G+    ++   + +  R P+L+  +  + +V  G  HT VL+     ++T+G+ +NG 
Sbjct: 498 TWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGAGDNGK 557

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGH 378
           LG G+  + + P+ V        + +++ G + + A++  G I  WG G   G  + D  
Sbjct: 558 LGHGNTKMEYYPKIVDA-LKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPCLGVGAADAV 616

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                        ++ P IV    +V  + +S G  H  AL
Sbjct: 617 -------------HLLPKIVESLRDVHIVDISLGDCHCLAL 644


>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
          Length = 393

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 185/403 (45%), Gaps = 47/403 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ + +    V  A E ++++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTNDEKEWVCVVEALEPYAVRSVVSGSRNSLAICDDGTLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPGK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
             + +   + I IP +  C   +  +Q A G   SV +T  G V SWG           +
Sbjct: 130 DEMERPLRRDIVIPKR--CAPKLVVRQVAAGGTHSVVLTREGHVWSWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  ++ENG ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALEENGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V     E  + QVSCG  H+ A++ +G+I ++G  G HG         G ++  G  
Sbjct: 293 PQKVNLLAGED-IIQVSCGGTHSVALTRDGRIFSFG-RGDHGRL-----GCGRKVTTGQP 345

Query: 390 VDY---IHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 422
           +D    I P    F +  +       A  V+CG  HT A++E+
Sbjct: 346 LDVPVKIPPPEGQFNDAAEDDDGKWVAKVVACGGRHTLAIVEW 388



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 143/346 (41%), Gaps = 41/346 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           +  +  V A G  + GQLG+  N       +  +LEP  +         + +G  +S AI
Sbjct: 1   MAASTTVIAWGSGEDGQLGLGTNDEKEWVCVVEALEPYAVR-------SVVSGSRNSLAI 53

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             DG L+ WG N  G LG   +  K   IP++V+ L+ +   QAA+G    +AV   G+ 
Sbjct: 54  CDDGTLFTWGWNQRGTLGHPPET-KTENIPSQVKALANVKIVQAAIGGWHCLAVDDQGRA 112

Query: 199 LSWGAGGSGRLGH--GQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            +WG    G+ G   G++       R         P+L+       V+  AAG  HS  +
Sbjct: 113 YAWGGNEYGQCGEEPGKDEMERPLRRDIVIPKRCAPKLV-------VRQVAAGGTHSVVL 165

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
              G V+ +G       + Q       P  +  L     +  G +H   L   G L+ WG
Sbjct: 166 TREGHVWSWGQPWPPGDIKQ----ISIPVRVQGLENVRLIAVGAFHNLALEENGTLWAWG 221

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
           +NE G LG G       P  VQG  S + VD  + GW  TA   +G++  WG  G HG  
Sbjct: 222 NNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHSTALTDKGEVYGWG-RGEHGRL 280

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                      G  +    + P  VN       +QVSCG  H+ AL
Sbjct: 281 G---------FGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVAL 317


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 149/319 (46%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       +  +K +A   GG H L LT+ G V++ G  + G
Sbjct: 2647 GEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSWGEGEDG 2706

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I    +P  I  LK K +  I+ G  HS+AI  +GELY WG    G+LG G  
Sbjct: 2707 KLGHGNCISLD-KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGRLGHGDT 2765

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  P    V+ L G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 2766 ITQTRP--KLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGG----- 2818

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S   YTP  +  L G+ V     G   S  + + G V+ +G     ++     +H 
Sbjct: 2819 ----SDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV 2874

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P+L+  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V  
Sbjct: 2875 RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVNRKPSLVHD 2934

Query: 337  PFSESPVDQVSCGWKHTAA 355
               ++ V++VSCG  H+ A
Sbjct: 2935 -LEDARVNRVSCGSSHSIA 2952



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 164/354 (46%), Gaps = 57/354 (16%)

Query: 88   ETGCVYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            +   VY  GLND  QLG          I   +   L+P+ I+G  K +  +S        
Sbjct: 2587 QQSAVYVWGLNDKDQLGGLKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQ------- 2639

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG      +  P  +  LS    K+ A+  G + ++A+T  
Sbjct: 2640 ---EGKLYACGEGTNGRLGLGDD--NNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQD 2694

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   S+           P+LI+ L+  +++  A G  HSA I  
Sbjct: 2695 GKVFSWGEGEDGKLGHGNCISL---------DKPKLIEILKSKRIRDIACGSGHSAAIAS 2745

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYT 311
            NG +Y +G     ++   +     RP L+  L      +V CG     T  LT+ G +Y+
Sbjct: 2746 NGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYS 2805

Query: 312  WGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
            WG  + G LG G  D  ++P   +R+ G      V QV CG + + A+++ G++ TWG G
Sbjct: 2806 WGDGDFGKLGRGGSDGCYTPLAVDRLNG----LGVIQVECGAQFSLALTKYGEVWTWGKG 2861

Query: 368  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                           +LGHGND     PT+V      K + V+ G  H  A+ +
Sbjct: 2862 DYF------------RLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 2903



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 132/266 (49%), Gaps = 23/266 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  +P +    +   ++ +ACG  H+  +   G +Y  GL ++G+
Sbjct: 2700 WGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEYGR 2759

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  + I  +   L  + + + VVQ++ G     + A+T DG +Y WG    G+LG G  
Sbjct: 2760 LGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGS 2819

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 P+   V+ L+G+   Q   G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 2820 DGCYTPL--AVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHV--- 2874

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P L++ L G K+   A G LH   + + G+VY +GD        Q+GN A  
Sbjct: 2875 ------RKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGATS 2924

Query: 279  --RRPSLISKLPYSE--EVVCGGYHT 300
              R+PSL+  L  +    V CG  H+
Sbjct: 2925 VNRKPSLVHDLEDARVNRVSCGSSHS 2950



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 39/417 (9%)

Query: 13   YLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKH 71
            +L  D ++  +    +R   +  Q+    +WG  D  +LG G   S+ + P+      K 
Sbjct: 2564 FLASDWEVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSKIKLPIYSEVLSK- 2621

Query: 72   SLKAL-ACGGAHTLFL-TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-- 127
             LK +   GG+ TLF+ ++ G +YA G    G+LG+ ++     EP  I  L + V++  
Sbjct: 2622 -LKPIHIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDD-NNVCEPKAIPFLSQFVIKKV 2679

Query: 128  -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             + +G  H+ A+T DG+++ WG+  +G+LG G   +  +  P  +E L     +  A G 
Sbjct: 2680 AVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCIS--LDKPKLIEILKSKRIRDIACGS 2737

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              S A+   G++ +WG G  GRLGHG          + ++  P+L++ L G +V   A G
Sbjct: 2738 GHSAAIASNGELYTWGLGEYGRLGHGD---------TITQTRPKLVQALVGQRVVQVACG 2788

Query: 247  F--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCV 302
                 +  +  +G VY +GD    K+     +    P  + +L      +V CG   +  
Sbjct: 2789 SRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLA 2848

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
            LT  GE++TWG  +   LG G+   +  P  V+G      +  V+ G  H  A+++ G++
Sbjct: 2849 LTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQV 2907

Query: 362  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
              WG         ++ H   GQ G+G       P++V+  E+ +  +VSCG +H+ A
Sbjct: 2908 YAWG---------DNDH---GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIA 2952



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 140/315 (44%), Gaps = 26/315 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           T +Y      LG K   C        +R    L  NG+   +  GS E+++ P+    F 
Sbjct: 93  TPFYCDPIAGLGIKQLCCT-------ERSLMILSLNGNAYNMYHGS-ETQY-PLRVHGFS 143

Query: 70  KHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
              +  +A    G H L LT+ GCVY+ G  D G+LG  + + Y    L  S L K +V 
Sbjct: 144 DKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVF 203

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF- 186
           I+ G  +S+A++  GELY WG+ + G+LG G      +  PT V  L G      A G  
Sbjct: 204 IACGSTYSAALSASGELYTWGRGNYGRLGHGN--FDDVLTPTLVTTLKGHTVVHVACGSG 261

Query: 187 -EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
             Q++ VT  G V SWG G  G+LG G          +    TP+++ +L  + V     
Sbjct: 262 DSQTLCVTASGIVFSWGDGDYGKLGRGG---------TDGSKTPKIVDKLLDINVVKVFC 312

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G   SA +  +G VY +G     ++      H R P +I  L     +++  G  H   L
Sbjct: 313 GGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILAL 372

Query: 304 TSGGELYTWGSNENG 318
           T    +Y WG N+ G
Sbjct: 373 TEDQFVYGWGRNDYG 387



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 139/316 (43%), Gaps = 37/316 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C       +K L C     + L+  G  Y              N+ +  E   PLR+
Sbjct: 94  PFYCDPIAGLGIKQLCCTERSLMILSLNGNAY--------------NMYHGSETQYPLRV 139

Query: 119 SGLKKEVVQISTGY---HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   + + +   +    H  A+T DG +Y WG    G+LG G   +     P  +E L 
Sbjct: 140 HGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVS--YDEPKLIESLL 197

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                  A G   S A++  G++ +WG G  GRLGHG    +L         TP L+  L
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVL---------TPTLVTTL 248

Query: 236 EGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +G  V   A  +G   + C+  +G V+ +GD    K+     + ++ P ++ KL      
Sbjct: 249 KGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV 308

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +V CGG  +  LT+ GE+YTWG  +   LG GS + +  P+ ++    +  +  +S G  
Sbjct: 309 KVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIES-LRDKKIKDLSVGTT 367

Query: 352 HTAAISEGKILTWGWG 367
           H  A++E + + +GWG
Sbjct: 368 HILALTEDQFV-YGWG 382



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 136/307 (44%), Gaps = 32/307 (10%)

Query: 124  EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            EV+Q       S+        +Y+WG N   QLG G K +K I +P   E LS +     
Sbjct: 2570 EVLQEQVAIQRSTDTPPQQSAVYVWGLNDKDQLG-GLKGSK-IKLPIYSEVLSKLKPIHI 2627

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
            A G +    V+  GK+ + G G +GRLG G ++++           P+ I  L    +K 
Sbjct: 2628 AGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDNNVC---------EPKAIPFLSQFVIKK 2678

Query: 243  AA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
             A  +G  H+  + ++G+V+ +G+    K+         +P LI  L      ++ CG  
Sbjct: 2679 VAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSG 2738

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AA 355
            H+  + S GELYTWG  E G LG G       P+ VQ    +  V QV+CG +     A 
Sbjct: 2739 HSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVV-QVACGSRDAQTMAL 2797

Query: 356  ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
             ++G + +WG     G F        G+LG G       P  V+    +  +QV CG   
Sbjct: 2798 TTDGCVYSWG----DGDF--------GKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQF 2845

Query: 416  TGALLEY 422
            + AL +Y
Sbjct: 2846 SLALTKY 2852



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ +    P + +  + H++  +ACG   + TL +T +G V++ G  D+
Sbjct: 223 WGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDY 282

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G     +    L   VV++  G   S+A+T  GE+Y WGK    +LG G +
Sbjct: 283 GKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSE 342

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +  P  +E L     K  ++G    +A+T    V  W     GR  +GQ    LG 
Sbjct: 343 --EHVRYPKVIESLRDKKIKDLSVGTTHILALTEDQFVYGW-----GRNDYGQIDPTLGP 395

Query: 221 LRSTSEYTPRL 231
           + S     P L
Sbjct: 396 VVSEPTLCPTL 406



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  GRLGHG          + S   P+LI+ L    +   A G  +
Sbjct: 160 LALTQDGCVYSWGNGDGGRLGHGD---------TVSYDEPKLIESLLDKNIVFIACGSTY 210

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTS 305
           SA +  +G +Y +G     ++     +    P+L++ L       V CG     T  +T+
Sbjct: 211 SAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTA 270

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G +++WG  + G LG G  D   +P+ V      + V +V CG + +AA++  G++ TW
Sbjct: 271 SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVV-KVFCGGQFSAALTAHGEVYTW 329

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G G ++            +LGHG++    +P ++    + K   +S G  H  AL E
Sbjct: 330 GKGDAY------------RLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTE 374


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 171/351 (48%), Gaps = 38/351 (10%)

Query: 79   GGAHTLFL-TETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGY 132
            GG+ +LFL T++G  YA G    G+LG+  S N+     P +I+ L + VV+   + +G 
Sbjct: 2738 GGSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVN---SPHQITALSQHVVRKVAVHSGG 2794

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             H+ A+T DG ++ WG+  +G+LG G   +  +  P  +E L+G   +  A G   S AV
Sbjct: 2795 RHALALTADGRVFSWGEGDDGKLGHGDVTS--LDTPRCIEALNGFRVRDVAAGSNHSAAV 2852

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
            T  G++ +WG G  GRLGHG          + ++ TP+ ++ L G +V   + G     +
Sbjct: 2853 TSSGELYTWGLGEYGRLGHGD---------NLTQLTPKRVESLVGQRVVQVSCGSRDAQT 2903

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGE 308
              + E G VY +GD    K+          P L+ KL       V CG   +  LT  G 
Sbjct: 2904 LALVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGH 2963

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
            +YTWG  +   LG GS   +  P  V+G      V  VS G  H  A+++ G++  WG  
Sbjct: 2964 VYTWGKGDYFRLGHGSDQHVRWPTLVEG-LRGKKVIGVSVGALHCLAVTDAGQVFAWG-- 3020

Query: 368  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                   ++ H   GQ G+G+      PT+V   + +K  +V+CG +H+ A
Sbjct: 3021 -------DNDH---GQQGNGSITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 150/319 (47%), Gaps = 20/319 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P   +A  +H ++ +A   GG H L LT  G V++ G  D G
Sbjct: 2756 GEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDG 2815

Query: 102  QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG  +       P  I  L    V  ++ G +HS+A+T  GELY WG    G+LG G  
Sbjct: 2816 KLGHGDVTSLD-TPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDN 2874

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++ P   +VE L G    Q + G    Q++A+  GG V SWG G  G+LG G      
Sbjct: 2875 LTQLTP--KRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGG----- 2927

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    +P L+ +L G+ V     G   S  +  NG VY +G     ++      H 
Sbjct: 2928 ----SEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV 2983

Query: 279  RRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R P+L+  L   +   V  G  H   +T  G+++ WG N++G  G GSI V   P  VQG
Sbjct: 2984 RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQG 3043

Query: 337  PFSESPVDQVSCGWKHTAA 355
                  + +V+CG  H+ A
Sbjct: 3044 -IDGIKITRVACGSSHSVA 3061



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 135/293 (46%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG    +     P  I  L+ K+VV ++ G  
Sbjct: 3705 AVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCD-RPRIIESLRGKDVVDVACGGA 3763

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+AIT  GELY WGK   G+LG G    ++ P    VE L G      A G    Q+ A
Sbjct: 3764 HSAAITALGELYTWGKGRYGRLGHGDSDDQLKP--KLVEALLGYRVMDVACGSGDAQTCA 3821

Query: 192  VTG--GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            +T   GG V SWG G  G+LG G          S     P  I+ L G+ +     G   
Sbjct: 3822 ITDEEGGTVWSWGDGDYGKLGRGG---------SDGCKIPTKIESLSGLGIIKVECGSQF 3872

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            S  +  NG VY +G     ++      H RRP  +  L   +   +  G  H  V T  G
Sbjct: 3873 SVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQG 3932

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            E+YTWG N+ G LG G+   +  P R+        +++VSCG  HT A S  K
Sbjct: 3933 EVYTWGDNDEGQLGDGTTTGIQKP-RLVAALQNKKINRVSCGSAHTVAWSTCK 3984



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 179/390 (45%), Gaps = 43/390 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P VC A        LA GG  TLF +T  G VYATG    G
Sbjct: 3619 WGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLA-GGEQTLFAITSDGRVYATGYGAGG 3677

Query: 102  QLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI    S  +   LE L+   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 3678 RLGIGGAESVTVPSLLESLQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEGEDGKLGH 3735

Query: 158  GKKAAKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G K    +P   P  +E L G      A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3736 GNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGD-- 3789

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI--DENGRVYIFGDRAVDKML 271
                   S  +  P+L++ L G +V   A  +G   +  I  +E G V+ +GD    K+ 
Sbjct: 3790 -------SDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLG 3842

Query: 272  FQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                +  + P+ I  L      +V CG   +  L++ G +YTWG  +   LG G  + + 
Sbjct: 3843 RGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVR 3902

Query: 330  SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
             P++V        V  +S G  H    ++ G++ TWG             +  GQLG G 
Sbjct: 3903 RPKKVMT-LQGKKVISISTGALHCVVCTDQGEVYTWG------------DNDEGQLGDGT 3949

Query: 389  DVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  P +V   +N K  +VSCG  HT A
Sbjct: 3950 TTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 51/347 (14%)

Query: 92   VYATGLNDFGQLG--------ISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            VY  GLND  QLG        + + + +  SL+P+ ++G  K +            +T  
Sbjct: 2700 VYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPISVAGGSKSLF----------LVTQS 2749

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+ Y  G+ SNG+LGLG   ++ +  P ++  LS    ++ A+  G   ++A+T  G+V 
Sbjct: 2750 GKAYACGEGSNGRLGLGH--SRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVF 2807

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG  +S+          TPR I+ L G +V+  AAG  HSA +  +G +
Sbjct: 2808 SWGEGDDGKLGHGDVTSL---------DTPRCIEALNGFRVRDVAAGSNHSAAVTSSGEL 2858

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +      P  +  L      +V CG     T  L  GG +Y+WG  
Sbjct: 2859 YTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDG 2918

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
            + G LG G  +   SP  V    S   V  V CG + + A++  G + TWG G       
Sbjct: 2919 DFGKLGRGGSEGCSSPCLVDK-LSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYF---- 2973

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +LGHG+D     PT+V      K + VS G  H  A+ +
Sbjct: 2974 --------RLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD 3012



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 145/322 (45%), Gaps = 42/322 (13%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG G + S   P    A     ++ +A G  H+  +T +G +Y  GL ++G+
Sbjct: 2809 WGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGR 2868

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N+   L P R+  L  + VVQ+S G   +   A+   G +Y WG    G+LG G 
Sbjct: 2869 LGHGDNL-TQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG- 2926

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++    P  V+ LSG+       G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 2927 -GSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHV-- 2983

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P L++ L G KV   + G LH   + + G+V+ +GD        Q+GN + 
Sbjct: 2984 -------RWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHG----QQGNGSI 3032

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               RRP+L+  +       V CG  H+           W + E   +          PE 
Sbjct: 3033 TVNRRPTLVQGIDGIKITRVACGSSHS---------VAWTAPEPPSVA--------PPEP 3075

Query: 334  VQGPFSESPVDQVSCGWKHTAA 355
            V  P  + P+   + G   ++A
Sbjct: 3076 VPFPTIKDPLGSTAAGLTESSA 3097



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 168/371 (45%), Gaps = 45/371 (12%)

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTET------GCVYATGLNDFGQLGISENIGYSLEP 115
            PVV S   +H  + L    +H    T++      G +Y  G N  GQLG  E     +  
Sbjct: 3582 PVVFS--HEHDQQLLQWMNSHPEDWTQSWTAVGGGQIYGWGHNHRGQLGGVEGAKVKVPT 3639

Query: 116  L--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            +   +S L+   +Q++ G     AIT DG +Y  G  + G+  LG   A+ + +P+ +E 
Sbjct: 3640 VCEALSALRP--IQLAGGEQTLFAITSDGRVYATGYGAGGR--LGIGGAESVTVPSLLES 3695

Query: 174  LSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L  +F K+ A+  G +  +A++  G+V SWG G  G+LGHG +              PR+
Sbjct: 3696 LQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPC---------DRPRI 3746

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
            I+ L G  V   A G  HSA I   G +Y +G     ++   + +   +P L+  L    
Sbjct: 3747 IESLRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYR 3806

Query: 290  SEEVVCGG--YHTCVLTS--GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +V CG     TC +T   GG +++WG  + G LG G  D    P +++   S   + +
Sbjct: 3807 VMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIES-LSGLGIIK 3865

Query: 346  VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
            V CG + + A+S  G + TWG G  H            +LGHG D     P  V   +  
Sbjct: 3866 VECGSQFSVALSNNGSVYTWGKGDYH------------RLGHGVDEHVRRPKKVMTLQGK 3913

Query: 405  KALQVSCGFNH 415
            K + +S G  H
Sbjct: 3914 KVISISTGALH 3924



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 130/290 (44%), Gaps = 29/290 (10%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S+++    +Y+WG N   QLG G K +K I +P  V+    +     A G +    VT  
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLG-GPKGSK-IKVPQAVDWTVSLQPISVAGGSKSLFLVTQS 2749

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAA-AGFLHSACI 253
            GK  + G G +GRLG G   ++          +P  I  L + V  K+A  +G  H+  +
Sbjct: 2750 GKAYACGEGSNGRLGLGHSRNV---------NSPHQITALSQHVVRKVAVHSGGRHALAL 2800

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYT 311
              +GRV+ +G+    K+   +      P  I  L      +V  G  H+  +TS GELYT
Sbjct: 2801 TADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSSGELYT 2860

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGKILTWGWGGS 369
            WG  E G LG G      +P+RV+    +  V QVSCG +   T A+ EG  L + WG  
Sbjct: 2861 WGLGEYGRLGHGDNLTQLTPKRVESLVGQRVV-QVSCGSRDAQTLALVEGG-LVYSWGD- 2917

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G F        G+LG G       P +V+    +    V CG   + AL
Sbjct: 2918 -GDF--------GKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVAL 2958



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 125/289 (43%), Gaps = 35/289 (12%)

Query: 144  LYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            + + G+N    L L   AA  +++P   + E     F K      +   +V+G  +V  W
Sbjct: 2644 IQLVGRNVGNSLPLDDSAALARLLPPDFEFEQGDSAFNKSQQSVIQPISSVSGAKRVYVW 2703

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G     +LG  + S I           P+ +     ++    A G      + ++G+ Y 
Sbjct: 2704 GLNDKEQLGGPKGSKI---------KVPQAVDWTVSLQPISVAGGSKSLFLVTQSGKAYA 2754

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV------CGGYHTCVLTSGGELYTWGSN 315
             G+ +  ++      +   P  I+ L  S+ VV       GG H   LT+ G +++WG  
Sbjct: 2755 CGEGSNGRLGLGHSRNVNSPHQITAL--SQHVVRKVAVHSGGRHALALTADGRVFSWGEG 2812

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
            ++G LG G +  L +P  ++   +   V  V+ G  H+AA+ S G++ TWG G       
Sbjct: 2813 DDGKLGHGDVTSLDTPRCIEA-LNGFRVRDVAAGSNHSAAVTSSGELYTWGLG------- 2864

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN--HTGALLE 421
                   G+LGHG+++  + P  V      + +QVSCG     T AL+E
Sbjct: 2865 -----EYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVE 2908


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 167/360 (46%), Gaps = 36/360 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+LG G    R  P       +  + + + G  H++ +TE G V+  G N +GQ
Sbjct: 169 WGNNPSGQLGNGQRTQRNAPTRVRGLNQ--VVSASAGAEHSVAVTEDGSVWTWGSNAYGQ 226

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N   ++ P+++ G+  +VV ++     + A+  DG ++ WG NS+G+LG G    
Sbjct: 227 LGDGTNTLRAV-PVQVPGM-SDVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTH 284

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI  +V  LSG+     A G   ++AV   G   SWG    G+LG G   + L  LR
Sbjct: 285 SLLPI--QVPNLSGV--TNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDG---TTLNRLR 337

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P L+  L GV+    + G +H+  +  +G  + +G  +  ++      ++  P 
Sbjct: 338 ------PVLVAGLTGVRAL--SGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPV 389

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L  + E+  GGYHT      G LY WG N  G LG G+      P  VQ P S   
Sbjct: 390 QVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVP--VQVPLSG-- 445

Query: 343 VDQVSCGWKHTAA----ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           V     G+ ++ A    ++  ++        H  F+  GH++ G+LG G       PT V
Sbjct: 446 VRWFGAGYYYSVAERKKVNMAQV--------HTLFAW-GHNTNGELGDGTTTQRTSPTAV 496



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 176/393 (44%), Gaps = 52/393 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+   G LG G+   R  P  VV S   K      A G AH++ L   G V+  G N +
Sbjct: 474 WGHNTNGELGDGTTTQRTSPTAVVVSGIVK-----TAGGSAHSVALGAGGAVWTWGYNAY 528

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG +      + P ++ G+   V+ ++ G +H+ A++ DG +  WG N+ GQLG G  
Sbjct: 529 GQLG-NGTTTQVVTPTQLPGMSG-VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTT 586

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A ++ P    V  L G+    A  G   +VA+   G V +WG+   G+LG G        
Sbjct: 587 ANQLTP--QSVPELDGVTAISA--GSTHTVALKADGTVWAWGSNLYGQLGDG-------- 634

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
              T   +P  +  LE V V IAA G  H+  +  +G ++++G     ++      +   
Sbjct: 635 -TFTHRSSPVQVPSLENV-VSIAA-GHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSV 691

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L ++  +  GGYHT  L + G+++TWG N +G LG  +I   +SP  V G    
Sbjct: 692 PVQVSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPG---L 748

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---- 396
           + V  ++ G   TA +              GT    G++  GQLG G       PT    
Sbjct: 749 TNVIALAAGGYTTAVLKR-----------DGTVWAFGYNPNGQLGDGTTTSRSSPTATLM 797

Query: 397 --IVNFGENVK--------ALQVSCGFNHTGAL 419
             +V+    V         A   +CG+N  G L
Sbjct: 798 NSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQL 830



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 129/284 (45%), Gaps = 19/284 (6%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           HTL +   G ++A G N  GQLG  +    +  P R+ GL  +VV  S G  HS A+T D
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRN-APTRVRGL-NQVVSASAGAEHSVAVTED 213

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G ++ WG N+ GQLG G    + +P+  +V  +S +    AA    ++VA+   G V +W
Sbjct: 214 GSVWTWGSNAYGQLGDGTNTLRAVPV--QVPGMSDVVAVAAA--GSRTVALKADGTVWTW 269

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SG LG G          +T    P  +  L G  V   AAG  H+  + ++G  + 
Sbjct: 270 GINSSGELGDG---------TTTHSLLPIQVPNLSG--VTNIAAGLWHTLAVKKDGSAWS 318

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +G+ A  ++      +  RP L++ L     +  G  HT  L   G  + WG N  G LG
Sbjct: 319 WGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAWGWGYNSAGQLG 378

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
            G+      P +V        +D  + G+   A   +G +  WG
Sbjct: 379 NGTTTNSSIPVQVAALTQAVEID--AGGYHTLARRQDGTLYAWG 420



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 24/296 (8%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           A WG   YG+LG G+  ++  P   S  E   + A++ G  HT+ L   G V+A G N +
Sbjct: 571 AAWGYNAYGQLGNGTTANQLTP--QSVPELDGVTAISAGSTHTVALKADGTVWAWGSNLY 628

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG      +   P+++  L+  VV I+ G+ H+ A+  DG L++WG    GQLGLG  
Sbjct: 629 GQLG-DGTFTHRSSPVQVPSLEN-VVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTT 686

Query: 161 AAKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             + +P+      +SG+    A A G   +VA+   G+V +WG   SG+LG   +++I+ 
Sbjct: 687 TNQSVPVQ-----VSGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLG---DATII- 737

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                  Y+P L+  L  V + +AA G+  +A +  +G V+ FG     ++   +G    
Sbjct: 738 -----QRYSPVLVPGLTNV-IALAAGGYT-TAVLKRDGTVWAFGYNPNGQL--GDGTTTS 788

Query: 280 RPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           R S  + L  S  ++  G  H   L     +   G N  G LG G+     +P +V
Sbjct: 789 RSSPTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQV 844



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 174/385 (45%), Gaps = 47/385 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV         + A+A  G+ T+ L   G V+  G+N  G+
Sbjct: 219 WGSNAYGQLGDGTNTLRAVPVQVPGMSD--VVAVAAAGSRTVALKADGTVWTWGINSSGE 276

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +SL P+++  L   V  I+ G  H+ A+  DG  + WG N+ GQLG G    
Sbjct: 277 LGDGTTT-HSLLPIQVPNLSG-VTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLN 334

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+   V  L+G+  +  + G   +VA+   G    WG   +G+LG+G          
Sbjct: 335 RLRPV--LVAGLTGV--RALSGGVVHTVALKWDGTAWGWGYNSAGQLGNG---------T 381

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+   P  +  L    V+I A G+ H+    ++G +Y +GD     +    GN     S
Sbjct: 382 TTNSSIPVQVAALT-QAVEIDAGGY-HTLARRQDGTLYAWGDNFYGAL--GTGNTTSS-S 436

Query: 283 LISKLPYSEEVVCG-GYHTCV-------LTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           +  ++P S     G GY+  V       +     L+ WG N NG LG G+     SP  V
Sbjct: 437 VPVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAV 496

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                 S + + + G  H+ A+  G  + W W          G+++ GQLG+G     + 
Sbjct: 497 ----VVSGIVKTAGGSAHSVALGAGGAV-WTW----------GYNAYGQLGNGTTTQVVT 541

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           PT +     V  + V+ G NHT AL
Sbjct: 542 PTQLPGMSGV--IDVAAGVNHTVAL 564



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 140/306 (45%), Gaps = 41/306 (13%)

Query: 120 GLKKEVVQ--------ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           G+ +EV++        +S G +H+  +   G L+ WG N +GQLG G++  +    PT+V
Sbjct: 134 GITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQR--NAPTRV 191

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L+ + +  A  G E SVAVT  G V +WG+   G+LG G  +     LR+     P +
Sbjct: 192 RGLNQVVSASA--GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNT-----LRAVPVQVPGM 244

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
                   V +AAAG   +  +  +G V+ +G  +  ++      H+  P  +  L    
Sbjct: 245 SD-----VVAVAAAGS-RTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVT 298

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            +  G +HT  +   G  ++WG+N  G LG G+      P  V G    + V  +S G  
Sbjct: 299 NIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAG---LTGVRALSGGVV 355

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           HT A+  +G    WGW          G++S GQLG+G   +   P  V      +A+++ 
Sbjct: 356 HTVALKWDGT--AWGW----------GYNSAGQLGNGTTTNSSIP--VQVAALTQAVEID 401

Query: 411 CGFNHT 416
            G  HT
Sbjct: 402 AGGYHT 407



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 60/134 (44%), Gaps = 7/134 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  ++  R+ PV+        + ALA GG  T  L   G V+A G N  GQ
Sbjct: 723 WGYNSSGQLGDATIIQRYSPVLVPGLTN--VIALAAGGYTTAVLKRDGTVWAFGYNPNGQ 780

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S      + L   VV +S+G +H   +  D  +   G NS GQLG G    
Sbjct: 781 LGDGTTTSRSSP---TATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQ 837

Query: 163 KVIPIPTKVECLSG 176
           +  P P +V  L G
Sbjct: 838 R--PTPVQVTNLPG 849



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 20/157 (12%)

Query: 259 VYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
           V+ F  +A   ++   GN A+    R  L + + +   V  G YHT  + SGG L+ WG+
Sbjct: 112 VHSFVVKASPMIIDSNGNRAKCGITREVLRNFVQFCPSVSPGVYHTLEVKSGGSLWAWGN 171

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
           N +G LG G     ++P RV+G    + V   S G +H+ A++E G + TW         
Sbjct: 172 NPSGQLGNGQRTQRNAPTRVRG---LNQVVSASAGAEHSVAVTEDGSVWTW--------- 219

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
              G ++ GQLG G +     P  V    +V A+  +
Sbjct: 220 ---GSNAYGQLGDGTNTLRAVPVQVPGMSDVVAVAAA 253



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 18/175 (10%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  H+  +   G ++ +G+    ++   +      P+ +  L        G  H+  +T 
Sbjct: 153 GVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVAVTE 212

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
            G ++TWGSN  G LG G+  +   P  VQ P     V   + G +  A  ++G + TW 
Sbjct: 213 DGSVWTWGSNAYGQLGDGTNTLRAVP--VQVPGMSDVVAVAAAGSRTVALKADGTVWTW- 269

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTGAL 419
                      G +S G+LG G     + P  V    N+  +  ++ G  HT A+
Sbjct: 270 -----------GINSSGELGDGTTTHSLLPIQV---PNLSGVTNIAAGLWHTLAV 310


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+  S ++P +  +    +++ +ACG  HT  +T TG +Y    G ++ 
Sbjct: 310 WGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNA 369

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P R+SG  +  +V  +S G  H++ IT  G+LY +G  + G LG G
Sbjct: 370 GLLGHGSNVSHWI-PKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGTFGVLGHG 428

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---------TGGGKVLSWGAGGSGRL 209
            +  + I  P +VE L G+ T   + G   + AV         T  GK+ +WG G   RL
Sbjct: 429 NR--ETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRL 486

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  SS L          P  +  L       A  G   +  +  +G ++  G  +V  
Sbjct: 487 GHGDRSSKL---------KPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGS-SVYG 536

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L    N  R P L+ +        EVVCG YH  VLT  GE+YTWG   NG LG G I 
Sbjct: 537 QLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIA 596

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
              +P  V+    +  V +++CG   TAAI + K ++
Sbjct: 597 DRKTPTFVEA-LRDRSVKRIACGSGFTAAICQHKSVS 632



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 134/309 (43%), Gaps = 53/309 (17%)

Query: 142 GELYMWG--------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG        +  +        AA  I +P  +E    +     A G + +  VT
Sbjct: 243 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 302

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              +V +WG   SGRLGHG  +SI         + PRL++ L    V+  A G  H+  I
Sbjct: 303 RQAEVFTWGEECSGRLGHGAGTSI---------FQPRLVESLSICNVETIACGEFHTCAI 353

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G++     P  +S  P        V CG +HT ++TS G
Sbjct: 354 TATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSG-PLEGLQVSAVSCGTWHTALITSSG 412

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +LYT+G    G LG G+ + +  P+ V+       +  VSCG  HTAA+ E         
Sbjct: 413 KLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTI-SVSCGVWHTAAVVEVIMAQSNTS 471

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV------NFGENVKALQVSC 411
            GK+ TWG G  +            +LGHG+    + PT V      NF + V    ++ 
Sbjct: 472 SGKLFTWGDGDKY------------RLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTI 519

Query: 412 GFNHTGALL 420
           G   +G + 
Sbjct: 520 GLTTSGHIF 528



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 108/219 (49%), Gaps = 19/219 (8%)

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G +S+      +T    P+ ++    + V   A G  H+A +     V+ +G+    ++
Sbjct: 259 QGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEECSGRL 318

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G    +P L+  L     E + CG +HTC +T+ G+LYTWG  ++  G LG GS +
Sbjct: 319 GHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGS-N 377

Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
           V H  P+RV GP     V  VSCG  HTA I S GK+ T+G     GTF        G L
Sbjct: 378 VSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG----DGTF--------GVL 425

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GHGN     +P  V   + ++ + VSCG  HT A++E +
Sbjct: 426 GHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVI 464



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 53/369 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
           +ACG  H   +T    V+  G    G+LG     G S+ +P  +  L    V  I+ G  
Sbjct: 291 VACGVKHAALVTRQAEVFTWGEECSGRLG--HGAGTSIFQPRLVESLSICNVETIACGEF 348

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ AIT  G+LY WG  ++  G LG G   +  IP   +V   L G+     + G   + 
Sbjct: 349 HTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIP--KRVSGPLEGLQVSAVSCGTWHTA 406

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  GK+ ++G G  G LGHG         R T  Y P+ ++ L+G++    + G  H+
Sbjct: 407 LITSSGKLYTFGDGTFGVLGHGN--------RETISY-PKEVESLKGLRTISVSCGVWHT 457

Query: 251 ACIDE---------NGRVYIFGDRAVDKMLFQEGNHARR------PSLISKLPYS-EEVV 294
           A + E         +G+++ +GD   DK     G+ + +      PSLI    Y+  + V
Sbjct: 458 AAVVEVIMAQSNTSSGKLFTWGD--GDKYRLGHGDRSSKLKPTCVPSLID---YNFHKAV 512

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G ++T GS+  G LG  + D  + P  V+       V +V CG  H A
Sbjct: 513 CGHTLTIGLTTSGHIFTAGSSVYGQLGNPNNDGRY-PRLVEEKLGGGGVVEVVCGAYHVA 571

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            +++ G++ TWG G +            G+LGHG+  D   PT V    +    +++CG 
Sbjct: 572 VLTQSGEVYTWGKGAN------------GRLGHGDIADRKTPTFVEALRDRSVKRIACGS 619

Query: 414 NHTGALLEY 422
             T A+ ++
Sbjct: 620 GFTAAICQH 628


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 150/330 (45%), Gaps = 27/330 (8%)

Query: 41  ALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA--LACGGAHTLFLTETGCVYATGLN 98
           +L G G  GRLG G       P +  +  K  +KA  + CG  H++ ++  G VY  G  
Sbjct: 69  SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128

Query: 99  DFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             G LG     NI   L    ++ LK  V Q+    +HS  +T DG++Y +G   +G+LG
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLK--VTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G  A + +P  T +E L G    Q       +  +T  G+V  WG+G  G+LG G   S
Sbjct: 187 HGDDAYRRLP--TMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNES 244

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                     + P L++ LEG  +K    G+  +A I+  G ++ +G     ++   +  
Sbjct: 245 ---------HFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEE 295

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           +   PSL++ L       + CG  H   ++    LYTWG N  G LG G     H P  V
Sbjct: 296 NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTVV 355

Query: 335 Q----GPFSESP----VDQVSCGWKHTAAI 356
                 P  ++P    V +VSCG  HTA++
Sbjct: 356 ATLLLAPSEDAPPRGRVAKVSCGANHTASL 385



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 42/341 (12%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSN 152
           GL   G+LG  +   Y  +P  +  L K+ ++   +  GY HS  I+  G++Y  G+   
Sbjct: 72  GLGSTGRLGHGDERKYR-DPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYK 130

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG   K    I     V+ L+ +   Q       S+ VT  G+V S+G    GRLGHG
Sbjct: 131 GFLG--HKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLGHG 188

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            ++             P +I+ L G KV        H+A + + G+V+++G    D  L 
Sbjct: 189 DDAY---------RRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGS-GTDGKLG 238

Query: 273 QEGNHAR-RPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           Q  N +   P L+  L     + + CG      +   G L+TWG    G LG G  +   
Sbjct: 239 QGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEENRT 298

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKIL-TWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P  V    +E P+  ++CG  H AAIS+  +L TW            G ++ GQLGHG+
Sbjct: 299 VPSLVTA-LAEVPIRAIACGAGHMAAISDMNVLYTW------------GKNAEGQLGHGD 345

Query: 389 DVDYIHPTIV---------NFGENVKALQVSCGFNHTGALL 420
             D   PT+V         +     +  +VSCG NHT +L+
Sbjct: 346 RHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLV 386



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 40/288 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW- 201
           LY WG  S     +G++A++  P       L  +  + +A    ++ A + G G  +S  
Sbjct: 13  LYTWGDQSL----IGREASEDHPADLPCPVLLHVGAEPSASTSSRTGAQIPGDGAAISTI 68

Query: 202 ---GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDEN 256
              G G +GRLGHG E              P L++ L  +G+K K    G+ HS  I   
Sbjct: 69  SLGGLGSTGRLGHGDERKY---------RDPTLVQSLHKQGIKAKSVVCGYFHSMVISSK 119

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G+VY  G      +  +  N+ R   L+  L   +  +V     H+ V+TS G++Y++G 
Sbjct: 120 GQVYTCGRGYKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGF 179

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
            ++G LG G       P  ++G      V Q +C   H A +++ G++  WG G      
Sbjct: 180 PKHGRLGHGDDAYRRLPTMIEG-LRGKKVVQTTCFGAHNAVLTDAGQVFMWGSG------ 232

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGAL 419
                 + G+LG G++  +  P +V    G+ +K++Q  CG++   A+
Sbjct: 233 ------TDGKLGQGDNESHFAPVLVRALEGKGIKSIQ--CGYDFAAAI 272



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 24/236 (10%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
           H+L +T  G VY+ G    G+LG  ++  Y   P  I GL+ K+VVQ +    H++ +T 
Sbjct: 164 HSLVVTSDGQVYSFGFPKHGRLGHGDD-AYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTD 222

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
            G+++MWG  ++G+LG G   +   P+   V  L G   K    G++ + A+   G + +
Sbjct: 223 AGQVFMWGSGTDGKLGQGDNESHFAPV--LVRALEGKGIKSIQCGYDFAAAINVEGHLFT 280

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGHG E          +   P L+  L  V ++  A G  H A I +   +Y
Sbjct: 281 WGHGLGGRLGHGDEE---------NRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLY 331

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKL---PYSE--------EVVCGGYHTCVLTS 305
            +G  A  ++   + +    P++++ L   P  +        +V CG  HT  L S
Sbjct: 332 TWGKNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVS 387



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 18/148 (12%)

Query: 279 RRPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           R P+L+  L      ++ VVCG +H+ V++S G++YT G    G LG  + + + S   V
Sbjct: 88  RDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYKGFLGHKNQNNIRSFLLV 147

Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
               +   V QV     H+  + S+G++ ++G+               G+LGHG+D    
Sbjct: 148 DA-LASLKVTQVCAARNHSLVVTSDGQVYSFGF------------PKHGRLGHGDDAYRR 194

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLE 421
            PT++      K +Q +C   H   L +
Sbjct: 195 LPTMIEGLRGKKVVQTTCFGAHNAVLTD 222


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/363 (30%), Positives = 169/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  P  I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S GK+  +G G            S GQLG  +    + P
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGKVYAFGLG------------SSGQLGTRSTKSLMLP 346

Query: 396 TIV 398
            +V
Sbjct: 347 QVV 349



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 131/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P ++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P+LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A +K + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S + L   + P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 223 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 17/131 (12%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           ++V CG  HT  LT+ G++Y  GSN+   LG    D+     ++     +  + Q+SCG 
Sbjct: 43  QQVACGHRHTLFLTATGKVYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGS 99

Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQ 408
           +H+ A+S+ G++L+WG             +  GQLGH  + + +  P +V    +   +Q
Sbjct: 100 RHSLALSDWGQVLSWG------------DNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQ 147

Query: 409 VSCGFNHTGAL 419
           ++CG NH+ AL
Sbjct: 148 IACGNNHSLAL 158



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 361
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V QV+CG +HT  ++    
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLT---- 56

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  + G     G +   QLGH  D+    P ++   ++   +Q+SCG  H+ AL +
Sbjct: 57  -------ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSD 107

Query: 422 Y 422
           +
Sbjct: 108 W 108


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 182/399 (45%), Gaps = 41/399 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +    +  A E + ++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C S +  +Q A G   SV +T  G V SWG           
Sbjct: 130 KDDTGRPLRRDIVIPQR--CASKLVVRQVAAGGTHSVVLTREGHVWSWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S   P  ++ LE  +V++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--RVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P+RV     E  V QVSCG  H+ A++ +G++ T+G  G HG     G+      G   
Sbjct: 293 VPQRVNLLVGEDIV-QVSCGGTHSVALTRDGRMYTFG-RGDHGRL---GYGRKVTTGQPM 347

Query: 389 DVDYIHPTIVNFGENVKALQ-----VSCGFNHTGALLEY 422
           +V    P   N  ++  A +     V+ G  HT A++E+
Sbjct: 348 EVPIDIPPPKNLTDSGDAGRWIAKLVASGGRHTLAIVEW 386



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 142/339 (41%), Gaps = 38/339 (11%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           V A G  + GQLGI  N       I  +LEP ++         +  G  +S AI  DG+L
Sbjct: 7   VIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVR-------SVVAGSRNSLAICDDGKL 59

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG N  G LG      K   IP++V+ L+ +   QAA+G    +AV   G+  +WG  
Sbjct: 60  FTWGWNQRGTLGH-PPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 205 GSGRLGHGQE--SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G+ G   E        LR       R   +L    V+  AAG  HS  +   G V+ +
Sbjct: 119 EYGQCGEEPERKDDTGRPLRRDIVIPQRCASKL---VVRQVAAGGTHSVVLTREGHVWSW 175

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           G       + Q       P  +  L     +  G +H   L   G L+ WG+NE G LG 
Sbjct: 176 GQPWPPGDIKQ----ISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGT 231

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
           G       P  VQG    + VD  + GW  TA   +G++  WG  G HG           
Sbjct: 232 GDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG-RGEHGRLG-------- 282

Query: 383 QLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGAL 419
             G  +    + P  VN   GE++  +QVSCG  H+ AL
Sbjct: 283 -FGDNDKSSKMVPQRVNLLVGEDI--VQVSCGGTHSVAL 318


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 157/328 (47%), Gaps = 21/328 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G LGLG +E      P         S++  ACG +HTL LT+ G +++ G ND 
Sbjct: 6   WGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   +   +  P  IS L+  +V  +S G  HS A+T  G+++ WG NS GQLG   
Sbjct: 66  GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIGQLG-HD 124

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    P  ++ ++     Q A G   S+A+T  G++ SWGA G G+LG G       
Sbjct: 125 TDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLG------- 177

Query: 220 FLRSTSE--YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
              +T E   TP L+K L G+ +   A G  HS  + ++G ++ +G     ++   +   
Sbjct: 178 ---TTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLVS 234

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P  +  L       + CG   +  LT  G ++T G+   G LG G+      P R+ 
Sbjct: 235 RCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILP-RMV 293

Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKI 361
                S + Q++CG +HT A   S GKI
Sbjct: 294 FELMGSKITQIACGRRHTLAFVPSRGKI 321



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/300 (33%), Positives = 151/300 (50%), Gaps = 17/300 (5%)

Query: 44  GNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           GN D+G+LG  +  L ++ RP   S+ E + +  ++CG  H+L LT  G V++ G N  G
Sbjct: 61  GNNDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNSIG 119

Query: 102 QLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++     P  I  +  K VVQI++G  HS A+T  GEL+ WG N  GQLGLG  
Sbjct: 120 QLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTT 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             KV+  PT V+ L+GI     A G   S AV+  G +  WG    G+LG          
Sbjct: 180 GEKVV-TPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLND------- 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
               S   P+ +K L  + V+  + G   SA + + G V+  G     ++     ++   
Sbjct: 232 --LVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEIL 289

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P ++ +L  S+  ++ CG  HT     S G++Y +G    G LG+G I   ++P+ V+GP
Sbjct: 290 PRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNYNTPQIVRGP 349



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 142/303 (46%), Gaps = 32/303 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQA 182
           V Q + G  H+  +T DG+L+  G N +GQLG        +P   P  +  L        
Sbjct: 38  VQQAACGTSHTLLLTKDGKLFSCGNNDHGQLG---HDTDCLPNKRPQFISSLENYIVTHV 94

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+V SWG+   G+LGH  +      L++ +  TPR+IK +    V  
Sbjct: 95  SCGTTHSLALTNWGQVFSWGSNSIGQLGHDTD------LQTYT--TPRMIKTIATKTVVQ 146

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGY 298
            A+G  HS  +  +G ++ +G     ++ L   G     P+L+  L   P +  + CGG 
Sbjct: 147 IASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAF-IACGGN 205

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
           H+  ++  G ++ WG N  G LG+  +     P++++       V  +SCG   +A ++ 
Sbjct: 206 HSFAVSKSGAIFGWGKNTFGQLGLNDLVSRCFPQQLKT-LRNLGVRYISCGDDFSAFLTQ 264

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           EG + T G     GTF        GQLGHG   + I P +V      K  Q++CG  HT 
Sbjct: 265 EGGVFTCG----AGTF--------GQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTL 312

Query: 418 ALL 420
           A +
Sbjct: 313 AFV 315



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 130/283 (45%), Gaps = 26/283 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +Y WG   +G+LGLG    + + +P +++       +QAA G   ++ +T  GK+ S G 
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH  +              P+ I  LE   V   + G  HS  +   G+V+ +G
Sbjct: 63  NDHGQLGHDTD--------CLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             ++ ++           P +I  +      ++  G +H+  LT+ GEL++WG+N  G L
Sbjct: 115 SNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYGQL 174

Query: 321 GIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
           G+G+  + + +P  V+   +  P+  ++CG  H+ A+S+ G I  WG      TF     
Sbjct: 175 GLGTTGEKVVTPTLVKS-LAGIPIAFIACGGNHSFAVSKSGAIFGWG----KNTF----- 224

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              GQLG  + V    P  +    N+    +SCG + +  L +
Sbjct: 225 ---GQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQ 264



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL  L SR  P          ++ ++CG   + FLT+ G V+  G   FGQ
Sbjct: 219 WGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQ 278

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA-ITVDGELY 145
           LG        L  +    +  ++ QI+ G  H+ A +   G++Y
Sbjct: 279 LGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 322


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 167/386 (43%), Gaps = 35/386 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G   YG L       R  P   S      +  +ACG   T FL ETG V+  G ND GQ
Sbjct: 16  FGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQ 75

Query: 103 LGISENIGYSLEPLRISGLKKEVVQI--STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            GI          L  + + +++  I  + G  H +AI+  G LY +G NS GQLG G  
Sbjct: 76  CGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG-- 133

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   I  PTK++ L+     + A  +  ++ +T  G + ++G    G+LG          
Sbjct: 134 STNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDD------- 186

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDKMLFQEGNHA 278
                 + P  +       V   A G  H+     NG V  FG  D       +    HA
Sbjct: 187 --GMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHA 244

Query: 279 RRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             PSL++  P    VV    CG YHT  L   G +Y++G N+ G LG G    L  P  +
Sbjct: 245 -SPSLLAA-PLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLI 302

Query: 335 QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +   +++   QV+CG  HT  +SE GK+  +G             ++ GQLG GN +D  
Sbjct: 303 KA-LAKTHAVQVTCGCYHTLVLSEDGKVYPFGR------------NNHGQLGLGNLIDCT 349

Query: 394 HPTIVNFGENVKALQVSCGFNHTGAL 419
            P I+    +   ++V+ GF H+  L
Sbjct: 350 SPQIIASLRDKFVVKVASGFYHSICL 375



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 154/335 (45%), Gaps = 29/335 (8%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G N +G+L  ++ +  +L P  IS     +++ ++ G   ++ +   G+++  G N 
Sbjct: 14  YSFGQNSYGELCHNDTVDRTL-PTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYND 72

Query: 152 NGQLGLGK--KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           +GQ G+G   +   +  +P  V     I   ++A G E   A++  G + ++G    G+L
Sbjct: 73  SGQCGIGSTSRVQSLRLVPALVT--EDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQL 130

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GHG  + I          TP  IK+L    V   A  + H+  +   G +Y FG   + +
Sbjct: 131 GHGSTNPIT---------TPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
           +   +G     P  ++         V CG +HT V  + G +  +G N++G LG G ++D
Sbjct: 182 LGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLD 241

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              SP  +  P     V  ++CG+ HT A++E           HG+    G +  GQLGH
Sbjct: 242 YHASPSLLAAPLDSLVVPSLACGYYHTIALAE-----------HGSVYSFGRNDYGQLGH 290

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+      PT++       A+QV+CG  HT  L E
Sbjct: 291 GHRHHLSEPTLIKALAKTHAVQVTCGCYHTLVLSE 325



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G    G+LG GS      P        + +  +AC   HT+ +T  G +YA G ND GQ
Sbjct: 122 FGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQ 181

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI + +   + P+ ++    + V+ ++ G HH+     +G +  +GKN +GQLG G   
Sbjct: 182 LGIDDGMDRHV-PVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTL 240

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                       L  +     A G+  ++A+   G V S+G    G+LGHG    +    
Sbjct: 241 DYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHL---- 296

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              SE  P LIK L          G  H+  + E+G+VY FG     ++          P
Sbjct: 297 ---SE--PTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSP 351

Query: 282 SLISKL--PYSEEVVCGGYHTCVLTS 305
            +I+ L   +  +V  G YH+  LT+
Sbjct: 352 QIIASLRDKFVVKVASGFYHSICLTA 377



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 29/284 (10%)

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y +G+NS G+L       + +P P  +     +     A G EQ+  +   G V + G  
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTP--ISFCHNVKILDVACGNEQTAFLFETGDVFTCGYN 71

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
            SG+ G G  S +      +    P L+ E   +    +A G  H   I  +G +Y FG 
Sbjct: 72  DSGQCGIGSTSRV-----QSLRLVPALVTE--DIAHIRSANGCEHLTAISRSGALYTFGF 124

Query: 265 RAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            +  ++     N    P+ I  L   +  EV C  +HT V+T  G LY +G N+ G LGI
Sbjct: 125 NSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGI 184

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSG 381
                 H P  +   F+  PV  V+CG  HT  +++ G ++ +G         ++ H   
Sbjct: 185 DDGMDRHVPVPLTY-FNSRPVLAVACGQHHTVVSLTNGGVVAFG---------KNDH--- 231

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQV---SCGFNHTGALLEY 422
           GQLG G  +DY H +       + +L V   +CG+ HT AL E+
Sbjct: 232 GQLGTGYTLDY-HASPSLLAAPLDSLVVPSLACGYYHTIALAEH 274


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 167/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E+     P          ++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 6   WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QI+ G  HS A+T  G++  WG N  GQ+G   
Sbjct: 66  HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               VI +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  + G+ +   A G  HS  I ++  V+ +G     ++   +  +  
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            PS +  +       V CG  ++  LT+ G ++T G+   G LG G+ +    P R+   
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP-RMVIE 294

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S G++ ++G G S            GQLG  N +    P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRNTISQTLP 342

Query: 396 TIV 398
            +V
Sbjct: 343 KVV 345



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+ +LG   L ++ RP+     + + +  +ACG  H++ LTE G + + G ND GQ+
Sbjct: 61  GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G S +N    L  +    + + VVQI+ G +HS A+T  GELY WG N  GQLG+  ++ 
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176

Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K +P    P ++  + GI     A G   S  ++    V  WG    G+LG   E     
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                +   P  +K +  + V+    G  +S  +   G V+  G     ++     N+  
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEM 287

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P ++ +L  S   +V CG  HT  L  SGG +Y++G   +G LG  +      P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347

Query: 337 P 337
           P
Sbjct: 348 P 348



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 29/275 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG  S+GQLGLG    + I +P+++E       +Q A G   ++ +T  G+V + G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH   +             P  I EL+   V   A G  HS  + E G++  +G
Sbjct: 63  NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           D    ++     N       I +   S  VV   CG  H+  LTS GELY+WGSN  G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171

Query: 321 GIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           G+ S  D+ HS  P R+       P+  ++CG  H+  IS+   + +GW          G
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGW----------G 219

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            ++ GQLG  ++ +  +P+ +     +    V+CG
Sbjct: 220 KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           E      PS I   P S  +++ CG  HT  LT+ G++Y  G+N++  LG       H  
Sbjct: 20  ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-------HEL 72

Query: 331 PERVQGPFSESP---VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 386
           P +   P  E     V Q++CG +H+ A++E G+IL+WG             +  GQ+GH
Sbjct: 73  PTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG------------DNDCGQVGH 120

Query: 387 GNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
             D D I  P I+ F  +   +Q++CG NH+ AL
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 162/341 (47%), Gaps = 37/341 (10%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           L + E+G V+      FG+   +E+I     P +      + V IS G  H++ +T +G+
Sbjct: 1   LCVLESGAVFT-----FGKSRFAEDI-----PSKFWFKNDKPVLISCGDEHTAIVTGNGK 50

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LYM+G N+ GQLGLG K    +  PT V+ L    TK A  G   ++  T  G V + G 
Sbjct: 51  LYMFGSNNWGQLGLGSK--NTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGG 108

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG G         RST         +    K+K  AAG   SA + E+G+++++G
Sbjct: 109 NSEGQLGLGDTEE-----RSTFHLISFFTNQH---KIKQLAAGSYTSAAVTEDGQLFVWG 160

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  ++   +      P  +        + CG YH+ ++T  GELYT+G  ENG LG+ 
Sbjct: 161 DNSEGQIGLADEACVSVPCQVDVGKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLL 220

Query: 324 SIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
              + ++  P+ V G   +  V++V+CG +HT  ++E  + T+G G              
Sbjct: 221 PEQLKNNRVPQPVPGIMEK--VNKVACGGEHTVVLTETDVYTFGLG------------QY 266

Query: 382 GQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLGHG  + +   P  V      K   ++CG NHT  + E
Sbjct: 267 GQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE 307



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 143/299 (47%), Gaps = 43/299 (14%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +    K   CG  HTL  TE G VYA G N  G
Sbjct: 53  MFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 112

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +    S    +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL  +
Sbjct: 113 QLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADE 172

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A   +P    V    G      + G+  S  +TG G++ ++G   +G+LG   E      
Sbjct: 173 ACVSVPCQVDV----GKPVSSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQ----- 223

Query: 221 LRSTSEYTPRLIKELEGV--KVKIAAAGFLHSACIDENGRVYIFG--------------D 264
           L++      R+ + + G+  KV   A G  H+  + E   VY FG              +
Sbjct: 224 LKNN-----RVPQPVPGIMEKVNKVACGGEHTVVLTETD-VYTFGLGQYGQLGHGTFIFE 277

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            +V K +     H RR  + +       + CG  HT V+   G ++T+G   +G LG+G
Sbjct: 278 TSVPKSV----KHLRRHKICN-------ITCGENHTAVVAENGLMFTFGDGRHGKLGLG 325



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 157/358 (43%), Gaps = 39/358 (10%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+      ++CG  HT  +T  G +Y  G N++GQLG+      S +P  +  LK E  +
Sbjct: 27  FKNDKPVLISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVS-KPTCVKALKPEKTK 85

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
           ++  G +H+   T  G +Y  G NS GQLGLG    +          L   FT     KQ
Sbjct: 86  LAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEER------STFHLISFFTNQHKIKQ 139

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   S AVT  G++  WG    G++G   E+ +           P  +    G  V 
Sbjct: 140 LAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACV---------SVPCQVD--VGKPVS 188

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPSLISK-LPYSEEVVCGGY 298
             + G+ HSA I  +G +Y FG+    K  +L ++  + R P  +   +    +V CGG 
Sbjct: 189 SISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGGE 248

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           HT VLT   ++YT+G  + G LG G+     S  +         +  ++CG  HTA ++E
Sbjct: 249 HTVVLTE-TDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE 307

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            G + T+G  G HG            LG  N  +   PT+         L V+CG  H
Sbjct: 308 NGLMFTFG-DGRHGKLG---------LGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
           T  G+++T+G N  G LG         P+ V+    E  V Q+ CG  HT A   + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 362 LTWGWG 367
           +++G G
Sbjct: 310 VSFGRG 315



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 37/306 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
             L+  G  + WGSN  G L +   +   +P +   P S        V  +SCG+KHTA 
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ +GK+ T+            G +S GQLGH    +   P +V   E + + Q+ CG +
Sbjct: 251 LTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDCGSD 297

Query: 415 HTGALL 420
           HT A +
Sbjct: 298 HTLAYI 303



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
          Length = 1626

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 171/374 (45%), Gaps = 61/374 (16%)

Query: 43   WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            WG+  YG LG+G   ++     PV    + +  +  +ACG  H++ LT  G VY+ G N 
Sbjct: 818  WGHSSYGCLGVGPHMTKTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNH 876

Query: 100  FGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            +GQLG     G +  P+ +  L  E +V +S G +HS AI+  G+L+ WG    GQLG G
Sbjct: 877  YGQLGTGRR-GQAPYPMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHG 935

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              A      P  ++ L       A  G+  S+ +T  GKV ++G+G  G+LG+G  + I 
Sbjct: 936  --AIDDCEKPKLLKSLENENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKI- 992

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------------R 265
                 TS      + E     +K     + H+  + + GR+Y +G              R
Sbjct: 993  -----TSPVPVYGLPE----PIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKR 1043

Query: 266  AVDKMLFQEGNHAR----------------RPSLISKLPYSEEVV---CGGYHTCVLTSG 306
            A ++++  EG+ A                  P+L+     S ++    CG +H+ V+++ 
Sbjct: 1044 ARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVISTT 1103

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSE---------SPVDQVSCGWKHTAAI 356
            G+LYTWG N +G LG+  I     P   + GP S          S + +V CG   T A+
Sbjct: 1104 GQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVRCGADFTLAL 1163

Query: 357  SEGKILTWGWGGSH 370
                 L WGWG +H
Sbjct: 1164 DAANKL-WGWGSNH 1176



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 154/340 (45%), Gaps = 41/340 (12%)

Query: 107  ENIGYSLEPL-RISGLKKEVVQIST---GYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            E++ YS +P+  +S  + E+   S+   G+ H++ I  + +LY WG +S G LG+G    
Sbjct: 775  ESVSYSHQPISNVSDSENEIEHKSSLGAGWAHAAHIR-NHKLYTWGHSSYGCLGVGPHMT 833

Query: 163  KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K   P P        +   Q A G   S+A+T  G V SWG+   G+LG G+        
Sbjct: 834  KTATPNPVSWFVYIRVEVIQVACGRNHSIALTTNG-VYSWGSNHYGQLGTGR-------- 884

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            R  + Y P L+  L    +   +AG  HS  I  +G+++ +G     ++     +   +P
Sbjct: 885  RGQAPY-PMLVDSLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKP 943

Query: 282  SLISKLPYSEEVVC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             L+  L  +E ++   GGY H+ +LTS G+++T+GS   G LG GS   + SP  V G  
Sbjct: 944  KLLKSLE-NENIISAYGGYSHSIILTSNGKVFTFGSGSFGQLGNGSTTKITSPVPVYG-- 1000

Query: 339  SESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ---LGHGNDVD--- 391
               P+  +   + H  A+S+ G++ TWG       F             L  G+  D   
Sbjct: 1001 LPEPIKCIYTAYFHNLALSDVGRLYTWGSSPQVLRFHAQSQKRARNQLVLNEGDQADDAE 1060

Query: 392  -----------YIHPTIVNFGE-NVKALQVSCGFNHTGAL 419
                       ++ PT+V+    +    Q+ CG +H+  +
Sbjct: 1061 IDALTADDGLLHLSPTLVDTSHISGDIFQMCCGCHHSAVI 1100



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 40/214 (18%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG------ 96
            +G+G +G+LG GS      PV      +  +K +     H L L++ G +Y  G      
Sbjct: 976  FGSGSFGQLGNGSTTKITSPVPVYGLPE-PIKCIYTAYFHNLALSDVGRLYTWGSSPQVL 1034

Query: 97   ---------------LNDFGQLGISENIGYS-------LEPLRI--SGLKKEVVQISTGY 132
                           LN+  Q   +E    +       L P  +  S +  ++ Q+  G 
Sbjct: 1035 RFHAQSQKRARNQLVLNEGDQADDAEIDALTADDGLLHLSPTLVDTSHISGDIFQMCCGC 1094

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV---------ECLSGIFTKQAA 183
            HHS+ I+  G+LY WG N +GQLG+     +++P  T V            SG   K+  
Sbjct: 1095 HHSAVISTTGQLYTWGLNLDGQLGVSGIRERLVPTVTLVGPPSVIVDSSSTSGSLIKEVR 1154

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             G + ++A+    K+  WG+   G+LG   E  +
Sbjct: 1155 CGADFTLALDAANKLWGWGSNHEGQLGKIPEEDL 1188


>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
           DW4/3-1]
          Length = 860

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 175/393 (44%), Gaps = 50/393 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
           WG+  YG+LG G+   R  PV         + ALA GG        AH+L L   G V+A
Sbjct: 218 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 275

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG       +  P+++ GL   V  ++ G  HS A+  DG ++ WG NS+GQ
Sbjct: 276 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
           LG G   A+  P P +V  L+ +    A     +LG   + S+A+   G V +WG   S 
Sbjct: 334 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G G  +         +  TP  + EL G    +  AG LH+  +  +G V+ +GD + 
Sbjct: 392 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 440

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++         +P  +S L     +  G  H+  + S G ++ WG N  G LGIG    
Sbjct: 441 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 500

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              P +  G  S   +  ++ G  H+ A+   G + TW            G ++ GQLG 
Sbjct: 501 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTW------------GSNAYGQLGD 545

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G  +D      V    ++ AL  + G +H+ AL
Sbjct: 546 GTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 576



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ D+G+LG G++ SR  PV  S     +++A+  G AH++ +   G V+  G NDFG
Sbjct: 584 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 641

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P+++SGL   V  ++ G +HS A+  DG L+ WG N+ GQLG G   
Sbjct: 642 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 699

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +   P +V  L+G+    A  G   S+A+   G V  WGA   G+LG G  +      
Sbjct: 700 --IQSTPAQVPGLTGVIALAA--GNGHSLALRTDGTVWGWGANSFGQLGDGTTTP----- 750

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           RST    P L        V    AG  ++  +     V+ +G ++  ++          P
Sbjct: 751 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 804

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +S L     +  G  H   L +   ++ WG N+ G +G G+  ++ +P  V  P
Sbjct: 805 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 860



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 169/378 (44%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G   +R  PV  +     S+ ALA G +H+L L   G V+  G N +GQ
Sbjct: 485 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 542

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  +    ++ GL  ++  ++ G HHS A+  DG +++WG N  GQLG G   +
Sbjct: 543 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 600

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +   +A  G   SVAV   G V  WG    G+LG G          
Sbjct: 601 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 648

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P  +  L GV     A G  HS  +  +G ++ +G   V ++          P+
Sbjct: 649 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 705

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G  H+  L + G ++ WG+N  G LG G+     +P +V G    + 
Sbjct: 706 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 762

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++ G  +T A+ SE  +  W            G  S GQLG G       P  V+  
Sbjct: 763 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTTPVQVSGL 810

Query: 402 ENVKALQVSCGFNHTGAL 419
            +V AL  + G  H  AL
Sbjct: 811 TDVTAL--AAGNAHALAL 826



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 37/347 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     + G G   +R  PV  S  E     AL  G  H + L   G V+A G N  GQ
Sbjct: 385 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 442

Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +     +P+++SGL   +  ++TG  HS A+  DG ++ WG N  GQLG+G  A
Sbjct: 443 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 499

Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            + IP+  T +  +S +     A G   S+A+ G G V +WG+   G+LG G        
Sbjct: 500 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 549

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+T+   P L        +   AAG  HS  +  +G V+++G     ++        + 
Sbjct: 550 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 603

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     V  G  H+  +   G ++ WG+N+ G LG G++     P +V G    
Sbjct: 604 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 660

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           + V  V+ G  H+ A+     L W W          G+++ GQLG+G
Sbjct: 661 TGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 696



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 153/342 (44%), Gaps = 42/342 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV        S+ A+A   AH+L L   G V+A G N +GQ
Sbjct: 168 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 225

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
           LG          P+++ GL   V  ++ G +        HS A+  DG ++ WG NS GQ
Sbjct: 226 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 283

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P    V+ L        A G   S+A+   G V +WG   SG+LG G  
Sbjct: 284 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 338

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
                   +T+  TP  +  L  V + +AA G          HS  +  +G V+ +G   
Sbjct: 339 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 389

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  F +G  A R  P  +S+L     +V G  H  VL S G ++ WG N +G LG G 
Sbjct: 390 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 447

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             V   P +V G    + +  ++ G  H+ A+ S+G I  WG
Sbjct: 448 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 486



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 38/336 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV        S+ ALA G  H+L L + G V+A G N  GQ
Sbjct: 276 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 333

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
           LG          P+++ GL   V+ ++ G           HS A+  DG ++ WG N + 
Sbjct: 334 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 391

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q G G  A +  P+  +V  L+G     A  G   +V +   G V +WG   SG+LG G 
Sbjct: 392 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 446

Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
                         TP   K ++  G+    A A G  HS  +  +G ++ +GD    ++
Sbjct: 447 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 493

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                     P   + L     +  G  H+  L   G ++TWGSN  G LG G+     +
Sbjct: 494 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 553

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             +V G    + +  ++ G  H+ A+ ++G +  WG
Sbjct: 554 AAQVPG---LTDITALAAGNHHSLALRNDGTVWVWG 586


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG+   GRLG G       P +  A    + + +ACG  H+  +T +G ++    G + +
Sbjct: 331 WGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSY 390

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I +   P R+ G  +   V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 391 GLLGHGNDISH-WTPKRVGGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG 449

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  + + +P +VE L G+ T + A G   + AV              GK+ +WG G  G
Sbjct: 450 DK--RSVALPKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKG 507

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L     K  A G   +  +  NGRV+  G    
Sbjct: 508 RLGHGDKEQKL---------VPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY 558

Query: 268 DKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++     +  + P L+  +L   + EE+ CG YH  VLT+  E+YTWG   NG LG G 
Sbjct: 559 GQLGDVRAD-GKLPGLVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGD 617

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           +   ++P  V+    E  V  V+CG   TAAI
Sbjct: 618 VMDRNTPTLVEA-LKEKQVKSVACGSGFTAAI 648



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 175/364 (48%), Gaps = 47/364 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           +ACG  H   +T+ G V+  G    G+LG   ++  +  P  +  L     + ++ G +H
Sbjct: 312 IACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVA-HPKLVEALATTNTEFVACGEYH 370

Query: 135 SSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           S A+T+ G+L+ WG   +S G LG G   +   P   +V   L GI     A G   +  
Sbjct: 371 SCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTP--KRVGGPLEGIRVSSVACGVWHTAL 428

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ ++G G  G LGHG + S+           P+ ++ L+G+K    A G  H+A
Sbjct: 429 VTSAGQLFTFGDGTFGVLGHGDKRSVA---------LPKEVESLKGLKTVRVACGVWHTA 479

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
            + E           +G+++ +GD   DK     G+  ++  P+ ++ L  Y+ ++V CG
Sbjct: 480 AVVEVMVGYSNAGGSSGKLFTWGDG--DKGRLGHGDKEQKLVPTCVAALVDYNFKQVACG 537

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT  G ++T GS+  G LG    D    P  V+G   E+ V++++CG  H A +
Sbjct: 538 HTLTVALTINGRVFTMGSSLYGQLGDVRADG-KLPGLVEGRLWEAFVEEIACGAYHVAVL 596

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + + ++ TWG G +            G+LGHG+ +D   PT+V   +  +   V+CG   
Sbjct: 597 TAKTEVYTWGKGAN------------GRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGF 644

Query: 416 TGAL 419
           T A+
Sbjct: 645 TAAI 648



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 125/285 (43%), Gaps = 22/285 (7%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           G++++WG++    +G G    K   + P  +E    +     A G   +  VT  G+V  
Sbjct: 275 GDVFLWGES----VGSGDGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFC 330

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG    GRLGHG +  +           P+L++ L     +  A G  HS  +  +G ++
Sbjct: 331 WGDESGGRLGHGVDVDVA---------HPKLVEALATTNTEFVACGEYHSCAVTLSGDLF 381

Query: 261 IFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGS 314
            +GD      L   GN      P  +   P        V CG +HT ++TS G+L+T+G 
Sbjct: 382 TWGDGTHSYGLLGHGNDISHWTPKRVGG-PLEGIRVSSVACGVWHTALVTSAGQLFTFGD 440

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFS 374
              G LG G    +  P+ V+       V +V+CG  HTAA+ E  +     GGS G   
Sbjct: 441 GTFGVLGHGDKRSVALPKEVESLKGLKTV-RVACGVWHTAAVVEVMVGYSNAGGSSGKLF 499

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G    G+LGHG+    + PT V    +    QV+CG   T AL
Sbjct: 500 TWGDGDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVAL 544



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 19/206 (9%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T    P+ ++    + V   A G  H+A + + G V+ +GD +  ++          P L
Sbjct: 293 TDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKL 352

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPF 338
           +  L  +  E V CG YH+C +T  G+L+TWG  ++  G LG G+ D+ H +P+RV GP 
Sbjct: 353 VEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGN-DISHWTPKRVGGPL 411

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
               V  V+CG  HTA + S G++ T+G     GTF        G LGHG+      P  
Sbjct: 412 EGIRVSSVACGVWHTALVTSAGQLFTFG----DGTF--------GVLGHGDKRSVALPKE 459

Query: 398 VNFGENVKALQVSCGFNHTGALLEYV 423
           V   + +K ++V+CG  HT A++E +
Sbjct: 460 VESLKGLKTVRVACGVWHTAAVVEVM 485


>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 859

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 175/393 (44%), Gaps = 50/393 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--------AHTLFLTETGCVYA 94
           WG+  YG+LG G+   R  PV         + ALA GG        AH+L L   G V+A
Sbjct: 217 WGDNGYGQLGDGTKAQRTTPVQVLGLA--GVTALAAGGNGTTVAISAHSLALRSDGTVWA 274

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG       +  P+++ GL   V  ++ G  HS A+  DG ++ WG NS+GQ
Sbjct: 275 WGDNSAGQLGDGTTTERA-TPVQVLGL-TSVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGF--EQSVAVTGGGKVLSWGAGGSG 207
           LG G   A+  P P +V  L+ +    A     +LG   + S+A+   G V +WG   S 
Sbjct: 333 LGDGTTTAR--PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G G  +         +  TP  + EL G    +  AG LH+  +  +G V+ +GD + 
Sbjct: 391 QFGDGMPA---------TRTTPVQVSELTGGTALV--AGDLHAVVLKSDGTVWAWGDNSS 439

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
            ++         +P  +S L     +  G  H+  + S G ++ WG N  G LGIG    
Sbjct: 440 GQLGEGVTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITAT 499

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              P +  G  S   +  ++ G  H+ A+   G + TW            G ++ GQLG 
Sbjct: 500 REIPVQATGLAS---ISALAAGDSHSLALRGNGSVWTW------------GSNAYGQLGD 544

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G  +D      V    ++ AL  + G +H+ AL
Sbjct: 545 GTAIDRATAAQVPGLTDITAL--AAGNHHSLAL 575



 Score =  121 bits (303), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 141/296 (47%), Gaps = 19/296 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ D+G+LG G++ SR  PV  S     +++A+  G AH++ +   G V+  G NDFG
Sbjct: 583 VWGSNDFGQLGDGTVTSRKTPVQVSGLS--AMRAVEAGPAHSVAVHLNGTVWVWGNNDFG 640

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG       ++ P+++SGL   V  ++ G +HS A+  DG L+ WG N+ GQLG G   
Sbjct: 641 QLGDGTVTSRAM-PVQVSGLTG-VTAVAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSG 698

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +   P +V  L+G+    A  G   S+A+   G V  WGA   G+LG G  +      
Sbjct: 699 --IQSTPAQVPGLTGVIALAAGNG--HSLALRTDGTVWGWGANSFGQLGDGTTTP----- 749

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           RST    P L        V    AG  ++  +     V+ +G ++  ++          P
Sbjct: 750 RSTPTQVPGL------TNVIALNAGAFYTVALRSERSVWEWGSKSAGQLGDGTVTQKTTP 803

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +S L     +  G  H   L +   ++ WG N+ G +G G+  ++ +P  V  P
Sbjct: 804 VQVSGLTDVTALAAGNAHALALRTDRTVWAWGGNQRGQIGDGTASIMPAPVNVSFP 859



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 169/378 (44%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G   +R  PV  +     S+ ALA G +H+L L   G V+  G N +GQ
Sbjct: 484 WGDNRRGQLGIGITATREIPVQATGLA--SISALAAGDSHSLALRGNGSVWTWGSNAYGQ 541

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I  +    ++ GL  ++  ++ G HHS A+  DG +++WG N  GQLG G   +
Sbjct: 542 LGDGTAIDRATA-AQVPGL-TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTS 599

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LS +   +A  G   SVAV   G V  WG    G+LG G          
Sbjct: 600 RKTPV--QVSGLSAMRAVEA--GPAHSVAVHLNGTVWVWGNNDFGQLGDGTV-------- 647

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P  +  L GV     A G  HS  +  +G ++ +G   V ++          P+
Sbjct: 648 -TSRAMPVQVSGLTGVTA--VAVGVYHSLALRNDGTLWAWGYNNVGQLGNGTSGIQSTPA 704

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G  H+  L + G ++ WG+N  G LG G+     +P +V G    + 
Sbjct: 705 QVPGLTGVIALAAGNGHSLALRTDGTVWGWGANSFGQLGDGTTTPRSTPTQVPG---LTN 761

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++ G  +T A+ SE  +  W            G  S GQLG G       P  V+  
Sbjct: 762 VIALNAGAFYTVALRSERSVWEW------------GSKSAGQLGDGTVTQKTTPVQVSGL 809

Query: 402 ENVKALQVSCGFNHTGAL 419
            +V AL  + G  H  AL
Sbjct: 810 TDVTAL--AAGNAHALAL 825



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 37/347 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     + G G   +R  PV  S  E     AL  G  H + L   G V+A G N  GQ
Sbjct: 384 WGYNLSRQFGDGMPATRTTPVQVS--ELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQ 441

Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  E +     +P+++SGL   +  ++TG  HS A+  DG ++ WG N  GQLG+G  A
Sbjct: 442 LG--EGVTPVRAKPMQVSGLAA-ITALATGDGHSVAVGSDGGIWAWGDNRRGQLGIGITA 498

Query: 162 AKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            + IP+  T +  +S +     A G   S+A+ G G V +WG+   G+LG G        
Sbjct: 499 TREIPVQATGLASISAL-----AAGDSHSLALRGNGSVWTWGSNAYGQLGDGTA-----I 548

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            R+T+   P L        +   AAG  HS  +  +G V+++G     ++        + 
Sbjct: 549 DRATAAQVPGL------TDITALAAGNHHSLALRNDGTVWVWGSNDFGQLGDGTVTSRKT 602

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +S L     V  G  H+  +   G ++ WG+N+ G LG G++     P +V G    
Sbjct: 603 PVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSG---L 659

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           + V  V+ G  H+ A+     L W W          G+++ GQLG+G
Sbjct: 660 TGVTAVAVGVYHSLALRNDGTL-WAW----------GYNNVGQLGNG 695



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 153/342 (44%), Gaps = 42/342 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  PV        S+ A+A   AH+L L   G V+A G N +GQ
Sbjct: 167 WGFNGSGQLGNGTATDRATPVQVPGLT--SVMAVAASEAHSLALRSDGTVWAWGDNGYGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYH--------HSSAITVDGELYMWGKNSNGQ 154
           LG          P+++ GL   V  ++ G +        HS A+  DG ++ WG NS GQ
Sbjct: 225 LGDGTK-AQRTTPVQVLGLAG-VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQ 282

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P    V+ L        A G   S+A+   G V +WG   SG+LG G  
Sbjct: 283 LGDGTTTERATP----VQVLGLTSVTALAAGAFHSLALRDDGTVWAWGNNSSGQLGDGT- 337

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--------FLHSACIDENGRVYIFGDRA 266
                   +T+  TP  +  L  V + +AA G          HS  +  +G V+ +G   
Sbjct: 338 --------TTARPTPVQVPGLTSV-IAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNL 388

Query: 267 VDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             +  F +G  A R  P  +S+L     +V G  H  VL S G ++ WG N +G LG G 
Sbjct: 389 SRQ--FGDGMPATRTTPVQVSELTGGTALVAGDLHAVVLKSDGTVWAWGDNSSGQLGEGV 446

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             V   P +V G    + +  ++ G  H+ A+ S+G I  WG
Sbjct: 447 TPVRAKPMQVSG---LAAITALATGDGHSVAVGSDGGIWAWG 485



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 38/336 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV        S+ ALA G  H+L L + G V+A G N  GQ
Sbjct: 275 WGDNSAGQLGDGTTTERATPVQVLGLT--SVTALAAGAFHSLALRDDGTVWAWGNNSSGQ 332

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG---------YHHSSAITVDGELYMWGKNSNG 153
           LG          P+++ GL   V+ ++ G           HS A+  DG ++ WG N + 
Sbjct: 333 LGDGTTTARP-TPVQVPGL-TSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSR 390

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           Q G G  A +  P+  +V  L+G     A  G   +V +   G V +WG   SG+LG G 
Sbjct: 391 QFGDGMPATRTTPV--QVSELTGGTALVA--GDLHAVVLKSDGTVWAWGDNSSGQLGEG- 445

Query: 214 ESSILGFLRSTSEYTPRLIKELE--GVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
                         TP   K ++  G+    A A G  HS  +  +G ++ +GD    ++
Sbjct: 446 -------------VTPVRAKPMQVSGLAAITALATGDGHSVAVGSDGGIWAWGDNRRGQL 492

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                     P   + L     +  G  H+  L   G ++TWGSN  G LG G+     +
Sbjct: 493 GIGITATREIPVQATGLASISALAAGDSHSLALRGNGSVWTWGSNAYGQLGDGTAIDRAT 552

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             +V G    + +  ++ G  H+ A+ ++G +  WG
Sbjct: 553 AAQVPG---LTDITALAAGNHHSLALRNDGTVWVWG 585


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 164/337 (48%), Gaps = 42/337 (12%)

Query: 43  WGNGDYG-----RLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           WG G  G     R+GLG +E               L+  A G  H+L L   G V++ G 
Sbjct: 5   WGPGPRGPVSRRRVGLGGVE---------------LRQAASGERHSLLLLSNGQVHSCGD 49

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  GQLG       S +  RI  L+   V  +S G  HS A+   G ++ WG  S GQLG
Sbjct: 50  NGRGQLG-QRGAPCSAQLKRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLG 108

Query: 157 LGK-KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G+ K   +IP+  K++ L+ I  KQ + G   S+A++ GG+V SWG+   G+LG G+  
Sbjct: 109 TGEFKETNLIPM--KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGK-- 164

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 +  S+ +P+ ++ L+G+ +   AAG  HS  +  +G  + +G     ++   + 
Sbjct: 165 ------KFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN 218

Query: 276 N---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           N    + +P  IS L       + CG  HT VLT  G+++T+G N  G LG         
Sbjct: 219 NVSGQSYKPYSISALKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSG 278

Query: 331 PERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWG 365
           P+ V+G   +  V Q+ CG  HT A   + GK++++G
Sbjct: 279 PQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 32/265 (12%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P+  +   L G+  +QAA G   S+ +   G+V S G  G G+LG           R   
Sbjct: 12  PVSRRRVGLGGVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKR--- 68

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPS 282
                 I+ LE + V + + G  HS  +   GRV+ +G  +  ++    F+E N    P 
Sbjct: 69  ------IRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLI--PM 120

Query: 283 LISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFS 339
            I  L     ++V CG YH+  L+ GG++++WGSN +G LG+G       SP+RV+    
Sbjct: 121 KIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRS-LD 179

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPT 396
             P+ QV+ G  H+ A+S     ++GW          G ++ GQL  H N+V      P 
Sbjct: 180 GIPLAQVAAGGAHSFALSLSGT-SFGW----------GRNNAGQLALHKNNVSGQSYKPY 228

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            ++  +N+  + +SCG+ HT  L +
Sbjct: 229 SISALKNLGVIYISCGYEHTVVLTQ 253


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 177/388 (45%), Gaps = 59/388 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV         +  L+ G  HT+ L   G V+A G N +GQ
Sbjct: 210 WGDNRYGQLGDGTTTQRAVPV--QVLNLSGVMNLSAGSFHTVALRSDGSVWAWGFNAYGQ 267

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG         +P+++ GL  +V+ +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 268 LGDGTTTS-RFQPVQV-GL-SDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTS 324

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+ +    LSG  T  A  G++ S+ +   G V SWG    G+LG G          
Sbjct: 325 SRVPVQSG---LSGGVTLVA--GYKHSLVLRSDGTVWSWGDNVFGQLGDG---------- 369

Query: 223 STSEYTPRLIKELEGVKVKI-------AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
               + PR       VKV          ++G LHS  +D NG V+ +GD    ++    G
Sbjct: 370 ---TFNPR----SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQL----G 418

Query: 276 NHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           N     SL++    L  S  V  G  HT VL +   ++ WG NE+G LG G++     P 
Sbjct: 419 NGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDRTRPV 478

Query: 333 RVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +V G    S V  VS G  H+ A+ S G +  WG       F+       GQLG G + D
Sbjct: 479 QVAG---LSGVSAVSAGSYHSLALRSNGTVWAWG-------FNRY-----GQLGDGTNTD 523

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + P  V     V A  V+ G +H+ AL
Sbjct: 524 RLQPVQVAGLSGVVA--VAAGDSHSLAL 549



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 174/377 (46%), Gaps = 43/377 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +   PV         + +L  G +H L L   G V+A G N + Q
Sbjct: 110 WGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGSGFSHGLALRSDGTVWAWGDNRYNQ 167

Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   N+G +    P+++ GL   +  ++ GY +S A+  DG ++ WG N  GQLG G  
Sbjct: 168 LG---NVGATRSNLPVQVPGLSGVIAVVAGGY-YSLALRSDGTVWAWGDNRYGQLGDGTT 223

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             + +P+  +V  LSG+    A  G   +VA+   G V +WG    G+LG G        
Sbjct: 224 TQRAVPV--QVLNLSGVMNLSA--GSFHTVALRSDGSVWAWGFNAYGQLGDGT------- 272

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +TS + P  +   +   V    AG  HS  +  +G V+ +GD    ++       +R 
Sbjct: 273 --TTSRFQPVQVGLSD---VLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRV 327

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P + S L     +V G  H+ VL S G +++WG N  G LG G+ +   S  +V    S 
Sbjct: 328 P-VQSGLSGGVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVS-WLSL 385

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
              D VS G  H+  + S G +  WG          D +S  GQLG+G  +D +    V 
Sbjct: 386 GRAD-VSSGQLHSVVLDSNGAVWAWG----------DNYS--GQLGNGTGLDSLVAAPVG 432

Query: 400 FGENVKALQVSCGFNHT 416
            G +V    VS GF HT
Sbjct: 433 LGGSVA---VSAGFKHT 446



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 145/299 (48%), Gaps = 26/299 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S   LA G  H++ +   G V+A G N  GQLG    +  S  P+R++ L   VV ++
Sbjct: 35  RSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD-SPTPVRVTNLSG-VVSVA 92

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G +HS  ++ DG ++ WG N+ GQLG G  +A   P+P +V+ LSG+ +  +  GF   
Sbjct: 93  SGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASAS--PVPVRVQNLSGVVSLGS--GFSHG 148

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G V +WG             + LG + +T    P  +  L GV + + A G+ +
Sbjct: 149 LALRSDGTVWAWGD---------NRYNQLGNVGATRSNLPVQVPGLSGV-IAVVAGGY-Y 197

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGG 307
           S  +  +G V+ +GD    ++   +G   +R  P  +  L     +  G +HT  L S G
Sbjct: 198 SLALRSDGTVWAWGDNRYGQL--GDGTTTQRAVPVQVLNLSGVMNLSAGSFHTVALRSDG 255

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            ++ WG N  G LG G+      P +V      S V  +  G  H+ A+ S+G +  WG
Sbjct: 256 SVWAWGFNAYGQLGDGTTTSRFQPVQV----GLSDVLTLVAGNYHSLAVRSDGAVWAWG 310



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 167/361 (46%), Gaps = 43/361 (11%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+   G+LG G+ L+S    +V +        A++ G  HTL L     V+A G+N+ G
Sbjct: 409 WGDNYSGQLGNGTGLDS----LVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHG 464

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +     P++++GL   V  +S G +HS A+  +G ++ WG N  GQLG G   
Sbjct: 465 QLG-DGTLTDRTRPVQVAGLSG-VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNT 522

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  +V  LSG+     A G   S+A+   G V +WG    G++G G  S      
Sbjct: 523 DRLQPV--QVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSW----- 573

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA--- 278
                + P  ++ +    V   +AG  HS  +  +G V+ +G     ++   +G+ A   
Sbjct: 574 ----RFLP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQL--GDGSTAINK 625

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  ++ L     +  G YH+  L S G ++ WG N +G LG GS+    +P RV G  
Sbjct: 626 PAPVQVAGLSGVVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSG-- 683

Query: 339 SESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             S V  V  G  H+ A  S+G +  WG+ G             GQLG G   D + P  
Sbjct: 684 -LSGVVSVVAGDYHSLARRSDGTVWAWGYNGE------------GQLGDGTRNDTLVPVW 730

Query: 398 V 398
           V
Sbjct: 731 V 731



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 34/295 (11%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
           +G    PL   G +    +++ G +HS  +  DG ++ WG N  GQLG G       P P
Sbjct: 25  LGRVRSPL---GGRSSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDS--PTP 79

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
            +V  LSG+ +   A G   S+ ++  G V +WG   +G+LG+G  S+            
Sbjct: 80  VRVTNLSGVVS--VASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASA---------SPV 128

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P  ++ L GV V + + GF H   +  +G V+ +GD   +++       +  P  +  L 
Sbjct: 129 PVRVQNLSGV-VSLGS-GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPGLS 186

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
               VV GGY++  L S G ++ WG N  G LG G+      P +V    + S V  +S 
Sbjct: 187 GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQV---LNLSGVMNLSA 243

Query: 349 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           G  HT A+ S+G +  W            G ++ GQLG G       P  V   +
Sbjct: 244 GSFHTVALRSDGSVWAW------------GFNAYGQLGDGTTTSRFQPVQVGLSD 286



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 160/360 (44%), Gaps = 38/360 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+   R    V  ++       ++ G  H++ L   G V+A G N  GQ
Sbjct: 358 WGDNVFGQLGDGTFNPR-SSAVKVSWLSLGRADVSSGQLHSVVLDSNGAVWAWGDNYSGQ 416

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +   +  P+ + G     V +S G+ H+  +  D  ++ WG N +GQLG G   
Sbjct: 417 LGNGTGLDSLVAAPVGLGG----SVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLT 472

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+  +V  LSG+    A  G   S+A+   G V +WG    G+LG G         
Sbjct: 473 DRTRPV--QVAGLSGVSAVSA--GSYHSLALRSNGTVWAWGFNRYGQLGDGTN------- 521

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             T    P  +  L GV     AAG  HS  +  +G V+ +G     ++   +G+++ R 
Sbjct: 522 --TDRLQPVQVAGLSGVVA--VAAGDSHSLALRSDGTVWAWGYNFDGQI--GDGSYSWRF 575

Query: 281 -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  +  L     V  GGYH+  L S G ++TWG N +G LG GS   ++ P  VQ    
Sbjct: 576 LPVQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGST-AINKPAPVQVAGL 634

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
              V   S  +      S+G +  WG       F+ D     GQLG G+ ++   P  V+
Sbjct: 635 SGVVSLGSGNYHSLGLRSDGTVWAWG-------FNFD-----GQLGDGSLLNRSTPVRVS 682


>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
            [Oxytricha trifallax]
          Length = 2049

 Score =  122 bits (306), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 120/460 (26%), Positives = 195/460 (42%), Gaps = 85/460 (18%)

Query: 15   KQDIKLGSKLGICKRWISSTLQRRFAAL---WGNGDYGRLGLGSLESRWR---------- 61
            K+++ LGS   I  + +    ++    +    G  + G+LGL  L    +          
Sbjct: 1562 KRNLHLGSYSQILGKEVGGINKQEMCGILFSMGTDNNGQLGLDVLSQDDQHSSHTPSIKV 1621

Query: 62   --PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
              P +  + +   ++ + CG +HT+ +  +G V+  G N  GQLG+ +N    L      
Sbjct: 1622 LYPRMIISLKDEVIREVCCGNSHTMVINMSGQVFVWGANQTGQLGLGDNSPQIL------ 1675

Query: 120  GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
                     S GY HS AIT   ELY+WG  S G  G+G    +  P+       S I T
Sbjct: 1676 ---------SAGYEHSIAITKSNELYIWG--SGGLCGIGTLKQQNAPVKIDFFNKSKILT 1724

Query: 180  KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE----YTPRLIKEL 235
              A  G   +VAVT   +  SWG    G+LG  Q S+I+   +   +     TP+ I +L
Sbjct: 1725 --AVCGGLHTVAVTKDWEAYSWGLTEGGQLGLPQ-STIVKLCQGQGDEPQVLTPQRIPKL 1781

Query: 236  EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM------------LFQEGNHARRPSL 283
            EG+++   A G  HS  + ++G +Y +G     ++            L  E +    P  
Sbjct: 1782 EGLQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQE 1841

Query: 284  ISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG---------IGSIDVLHS-- 330
            I+ L + +  +++CG   T   T  G+LY  G N+ G LG         I S++ +    
Sbjct: 1842 INGLKHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKVKKGK 1901

Query: 331  ---------PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
                     P RV   F    + Q++CG  H+ A+S +G  + W W          G   
Sbjct: 1902 HNQTSDVILPTRVIC-FQGIAIHQIACGESHSLAVSGDGMNMLWAW----------GMFK 1950

Query: 381  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             GQLG G     ++P  V    + +  +++CG  H+ AL+
Sbjct: 1951 NGQLGLGEVTMKLNPRPVQSLCSSQIQRIACGSMHSVALI 1990


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 158/329 (48%), Gaps = 26/329 (7%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLHVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G     ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNNAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
           T  G+++T+G N  G LG         P+ V+    E  V Q+ CG  HT A   + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +++G G   G  S   H   G L   +D+
Sbjct: 310 VSFGRGP--GCASRSPHP--GALAESSDI 334



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 137/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 76/301 (25%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLHVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+    
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKII--- 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
                                                          +V CG YH+  L+
Sbjct: 132 -----------------------------------------------QVACGHYHSVALS 144

Query: 305 SGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
             G++++WG+N +G LG+G       SP+RV+      P+ QV+ G  H+ A+S     +
Sbjct: 145 EDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGHHSFALSLSGT-S 202

Query: 364 WGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           +GWG ++           GQL   G+   V    P  +   + +  + +SCG+ HT  L 
Sbjct: 203 FGWGSNN----------AGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLT 252

Query: 421 E 421
           +
Sbjct: 253 Q 253



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 106/214 (49%), Gaps = 21/214 (9%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N+ G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG-----SGRLGHG 212
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G      S   G  
Sbjct: 272 PTAEKR--GPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAL 328

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
            ESS +  L S         K+L  V+VK   AG
Sbjct: 329 AESSDISCLVSA--------KDLADVQVKHIFAG 354


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 151/332 (45%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +    P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 296 WGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNA 355

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  ++  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 356 GLLGHGTDVSHWI-PKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHG 414

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            K  + +  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 415 DK--ETVFYPREVESLSGLRTIAVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKS 472

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+VY  G   V
Sbjct: 473 RLGHGDKEPRL---------KPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGS-TV 522

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+  KL     EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 523 YGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGD 582

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++   +P  V     E  V  ++CG   TAAI
Sbjct: 583 VEDRKAPTLVDA-LKERHVKNIACGSNFTAAI 613



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 168/363 (46%), Gaps = 45/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQ-ISTGYH 133
           +ACG  H   ++  G V+  G    G+LG    +G  +  P  I  L    +  ++ G  
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLG--HGMGKDVTGPQLIESLAATSIDFVACGEF 334

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ A+T+ GE+Y WG  ++  G LG G   +  IP   ++   L G+     + G   + 
Sbjct: 335 HTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIP--KRISGPLEGLQIASVSCGPWHTA 392

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G++ ++G G  G LGHG + ++         + PR ++ L G++    A G  H+
Sbjct: 393 LITSTGQLFTFGDGTFGVLGHGDKETV---------FYPREVESLSGLRTIAVACGVWHA 443

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
           A I E           +G+++ +GD    ++   +     +P+ +S L       V CG 
Sbjct: 444 AAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGH 503

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G++YT GS   G LG  + D    P  V+   ++  V++++CG  H A + 
Sbjct: 504 SLTVGLTTSGKVYTMGSTVYGQLGNPNADG-KLPCLVEDKLTKDCVEEIACGAYHVAVLT 562

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT+V+  +      ++CG N T
Sbjct: 563 SRNEVFTWGKGAN------------GRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFT 610

Query: 417 GAL 419
            A+
Sbjct: 611 AAI 613



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 133/306 (43%), Gaps = 53/306 (17%)

Query: 142 GELYMWGK---------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++Y+WG+          ++  +G LG ++  +IP P +   +  +     A G + +  
Sbjct: 229 GDVYIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVH--HIACGVKHAAL 286

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           V+  G+V +WG    GRLGHG    + G         P+LI+ L    +   A G  H+ 
Sbjct: 287 VSRQGEVFTWGEASGGRLGHGMGKDVTG---------PQLIESLAATSIDFVACGEFHTC 337

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTS 305
            +   G +Y +GD   +  L   G       P  IS  P        V CG +HT ++TS
Sbjct: 338 AVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQIASVSCGPWHTALITS 396

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
            G+L+T+G    G LG G  + +  P  V+   S      V+CG  H AAI E       
Sbjct: 397 TGQLFTFGDGTFGVLGHGDKETVFYPREVES-LSGLRTIAVACGVWHAAAIVEVIVTHSS 455

Query: 359 -----GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
                GK+ TWG          DG  S  +LGHG+    + PT V+   +    +V+CG 
Sbjct: 456 SSVSSGKLFTWG----------DGDKS--RLGHGDKEPRLKPTCVSALIDHTFHRVACGH 503

Query: 414 NHTGAL 419
           + T  L
Sbjct: 504 SLTVGL 509



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 108/213 (50%), Gaps = 20/213 (9%)

Query: 218 LGFLRSTSE-YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +G+L S S+   P+ ++    + V   A G  H+A +   G V+ +G+ +  ++    G 
Sbjct: 251 IGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGK 310

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
               P LI  L  +  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P
Sbjct: 311 DVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGT-DVSHWIP 369

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ GP     +  VSCG  HTA I S G++ T+G     GTF        G LGHG+  
Sbjct: 370 KRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG----DGTF--------GVLGHGDKE 417

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
              +P  V     ++ + V+CG  H  A++E +
Sbjct: 418 TVFYPREVESLSGLRTIAVACGVWHAAAIVEVI 450


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 25/295 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG GS   R  PV        S+   A    H+L L   G V+A G N++GQ
Sbjct: 110 WGFNGYGQLGDGSTTGRNTPVQVEGL--RSIVGAAAHYDHSLALKSDGTVWAWGRNEYGQ 167

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+R+ GL   VV IS+G+ +S A+  DG ++ WGKN  GQLG G    
Sbjct: 168 LGDGSKTDRHT-PVRVKGLDS-VVAISSGFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQ 225

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V+ L  +     A G   ++A+   G V SWG   +G+LG G +        
Sbjct: 226 SSAPV--QVQGLHSV--TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSD-------- 273

Query: 223 STSEYTPRLIKELEGVKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
               YTP    ++EG    +   AGF HS  +  +G V+ +G+   ++  F     +  P
Sbjct: 274 -MDRYTP---VQVEGFSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGF----GSSTP 325

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             + +L    ++  G  H+  + + G ++ WG N+NG LG G+     +P +VQG
Sbjct: 326 VQVQELDSVVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTARLTPIKVQG 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 168/353 (47%), Gaps = 43/353 (12%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG GS      PV     + HS++A+A GG+H L +   G V+A G N +GQLG    
Sbjct: 66  GQLGNGSTTGSPAPVQVQ--DLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGST 123

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +  P+++ GL+  +V  +  Y HS A+  DG ++ WG+N  GQLG G K  +  P+ 
Sbjct: 124 TGRNT-PVQVEGLRS-IVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPV- 180

Query: 169 TKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
            +V+ L  +    +  G+  S+AV   G V +WG    G+LG+G          +T    
Sbjct: 181 -RVKGLDSVVAISSGFGY--SLAVKSDGTVWAWGKNEYGQLGNGS---------TTQSSA 228

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK 286
           P  ++ L  V     A+G  H+  I  +G V+ +G     ++   +G+   R  P  +  
Sbjct: 229 PVQVQGLHSVTA--VASGDYHNLAIKRDGTVWSWGPNLAGQL--GDGSDMDRYTPVQVEG 284

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
              + +V  G  H+  L S G ++ WG+ +    G GS     +P +VQ    +S VD +
Sbjct: 285 FSSAVDVDAGFGHSLALKSDGTVWAWGNYQFNEWGFGS----STPVQVQE--LDSVVD-I 337

Query: 347 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           + G +H+ A+ ++G +  W W          G +  GQLG G     + P  V
Sbjct: 338 AAGTQHSLAVRNDGTV--WAW----------GKNDNGQLGDGTSTARLTPIKV 378



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 151/316 (47%), Gaps = 24/316 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIG 110
           L L ++      VV +      ++  A G +HTL L   G V+A G    GQLG     G
Sbjct: 19  LPLQAVADESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWG---GGQLGNGSTTG 75

Query: 111 YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            S  P+++  L   V  I+ G  H+ AI  DG ++ WG N  GQLG G    +  P+  +
Sbjct: 76  -SPAPVQVQDLHS-VEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPV--Q 131

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           VE L  I    AA  ++ S+A+   G V +WG    G+LG G +         T  +TP 
Sbjct: 132 VEGLRSIV--GAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSK---------TDRHTPV 180

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
            +K L+ V V I++ GF +S  +  +G V+ +G     ++       +  P  +  L   
Sbjct: 181 RVKGLDSV-VAISS-GFGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQGLHSV 238

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             V  G YH   +   G +++WG N  G LG GS    ++P +V+G FS S VD V  G+
Sbjct: 239 TAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEG-FS-SAVD-VDAGF 295

Query: 351 KHTAAI-SEGKILTWG 365
            H+ A+ S+G +  WG
Sbjct: 296 GHSLALKSDGTVWAWG 311



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 130/292 (44%), Gaps = 40/292 (13%)

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  H+ A+  +G ++ WG    GQLG G       P P +V+ L  +  +  A G   ++
Sbjct: 47  GESHTLALNANGTVWAWG---GGQLGNGSTTGS--PAPVQVQDLHSV--EAIAAGGSHNL 99

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLH 249
           A+   G V +WG  G G+LG G          +T   TP    ++EG++  + AAA + H
Sbjct: 100 AIKSDGTVWAWGFNGYGQLGDGS---------TTGRNTP---VQVEGLRSIVGAAAHYDH 147

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           S  +  +G V+ +G     ++          P  +  L     +  G  ++  + S G +
Sbjct: 148 SLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFGYSLAVKSDGTV 207

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
           + WG NE G LG GS     +P +VQG  S   V  V+ G  H  AI  +G + +WG   
Sbjct: 208 WAWGKNEYGQLGNGSTTQSSAPVQVQGLHS---VTAVASGDYHNLAIKRDGTVWSWG--- 261

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGAL 419
                     +  GQLG G+D+D   P  V  F     A+ V  GF H+ AL
Sbjct: 262 ---------PNLAGQLGDGSDMDRYTPVQVEGFS---SAVDVDAGFGHSLAL 301



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 66/134 (49%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R+ PV    F   S   +  G  H+L L   G V+A G   F +
Sbjct: 260 WGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGTVWAWGNYQFNE 317

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            G       S  P+++  L   VV I+ G  HS A+  DG ++ WGKN NGQLG G   A
Sbjct: 318 WGFG-----SSTPVQVQELDS-VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTA 371

Query: 163 KVIPIPTKVECLSG 176
           ++ PI  KV+   G
Sbjct: 372 RLTPI--KVQGFGG 383



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 29/185 (15%)

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVC 295
           +++AA G  H+  ++ NG V+ +G         Q GN +      P  +  L   E +  
Sbjct: 41  IRMAAGGESHTLALNANGTVWAWGGG-------QLGNGSTTGSPAPVQVQDLHSVEAIAA 93

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           GG H   + S G ++ WG N  G LG GS    ++P +V+G  S   +   +  + H+ A
Sbjct: 94  GGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEGLRS---IVGAAAHYDHSLA 150

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + S+G +  W WG           +  GQLG G+  D   P  V   ++V A  +S GF 
Sbjct: 151 LKSDGTV--WAWG----------RNEYGQLGDGSKTDRHTPVRVKGLDSVVA--ISSGFG 196

Query: 415 HTGAL 419
           ++ A+
Sbjct: 197 YSLAV 201


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 130/290 (44%), Gaps = 16/290 (5%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A++ GG H + L+  G VY+ G  D G+LG    + Y    L    L  E+V I+ G HH
Sbjct: 18  AVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHH 77

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT  G LY WGK   G+LG G    ++   P  VE L        A G    Q++ V
Sbjct: 78  SAAITSAGWLYTWGKGRYGRLGHGDSDDQL--RPKVVEALQDYKVIDVACGSGDAQTLCV 135

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T    V SWG G  G+LG G          S     P  I  L G+ V     G   S  
Sbjct: 136 TDDDNVWSWGDGDYGKLGRGG---------SDGCKVPLKIDSLAGLGVVKVECGSQFSVA 186

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           +  +G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE++
Sbjct: 187 LTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVF 246

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           TWG N+ G LG G+   LH P  V        + +V+CG  HT A S  K
Sbjct: 247 TWGDNDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLAWSTAK 295



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 143/311 (45%), Gaps = 31/311 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           LE ++   +KK  V +S+G  H  A++ +G +Y WG+  +G+LG G K +     P  +E
Sbjct: 6   LESIQHVFIKK--VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVS--YDRPKLIE 61

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L G+     A G   S A+T  G + +WG G  GRLGHG          S  +  P+++
Sbjct: 62  DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD---------SDDQLRPKVV 112

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-- 288
           + L+  KV   A  +G   + C+ ++  V+ +GD    K+     +  + P  I  L   
Sbjct: 113 EALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGL 172

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
              +V CG   +  LT  G +YTWG  +   LG G+ D +  P +V        +  ++ 
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAA-LQGKKIISIAT 231

Query: 349 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  H  A S+ G++ TW            G +  GQLG G       P +V+  +  K  
Sbjct: 232 GSLHCVACSDKGEVFTW------------GDNDEGQLGDGTTSALHRPRLVHALQGKKIT 279

Query: 408 QVSCGFNHTGA 418
           +V+CG  HT A
Sbjct: 280 RVACGSAHTLA 290



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 124/263 (47%), Gaps = 17/263 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+  S  RP +        +  +ACGG H+  +T  G +Y  G   +G+
Sbjct: 38  WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGR 97

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG  ++    L P  +  L+  +V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 98  LGHGDS-DDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRG- 155

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 156 -GSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHV-- 212

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    PR +  L+G K+   A G LH     + G V+ +GD    ++     +   
Sbjct: 213 -------RRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALH 265

Query: 280 RPSLISKLPYSE--EVVCGGYHT 300
           RP L+  L   +   V CG  HT
Sbjct: 266 RPRLVHALQGKKITRVACGSAHT 288



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 13/75 (17%)

Query: 346 VSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           VS G KH  A+S EG + +WG G              G+LGHGN V Y  P ++     V
Sbjct: 19  VSSGGKHCIALSSEGHVYSWGEGDD------------GKLGHGNKVSYDRPKLIEDLLGV 66

Query: 405 KALQVSCGFNHTGAL 419
           + + ++CG +H+ A+
Sbjct: 67  EIVDIACGGHHSAAI 81



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 15/124 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ D G+LG G+  +  RP +  A +   +  +ACG AHTL        ++T      +
Sbjct: 248 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL-------AWSTAKATQSR 300

Query: 103 LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +  S  + Y L + L  S L+  +V +    HH + +     L M+     G +GL K A
Sbjct: 301 MPASTPMEYDLVKDLSYSVLRNRLVLL----HHFAELLCPA-LAMF--PITGHIGLSKLA 353

Query: 162 AKVI 165
             ++
Sbjct: 354 PMLV 357


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
           T  G+++T+G N  G LG         P+ V+    E  V Q+ CG  HT A   + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 362 LTWGWG 367
           +++G G
Sbjct: 310 VSFGRG 315



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 37/306 (12%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
             L+  G  + WGSN  G L +   +   +P +   P S        V  +SCG+KHTA 
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ +GK+ T+            G +S GQLGH    +   P +V   E + + Q+ CG +
Sbjct: 251 LTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLVERIEGLVS-QIDCGSD 297

Query: 415 HTGALL 420
           HT A +
Sbjct: 298 HTLAYI 303



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 366 WGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 425

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  +V  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 426 GLLGHGTDVSHWI-PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 484

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            +  + I  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 485 DR--ENISYPREVESLSGLRTVSVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKN 542

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  I  L        A G   +  +  +GRV+  G   V
Sbjct: 543 RLGHGDKDARL---------EPTCISALIDYNFHRIACGHSLTVGLTTSGRVFTMGS-TV 592

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+  KL     EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 593 YGQLGNPQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGD 652

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++   +P  V+    +  V  ++CG  ++AAI
Sbjct: 653 VEDRKTPTLVEA-LKDRHVKYIACGSNYSAAI 683



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 49/365 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G ++  G    G+LG  + +N+   ++P  +  L    V  ++ G 
Sbjct: 347 IACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNV---VQPCLVEALASSTVDFVACGE 403

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQ 188
            H+ A+T+ GE+Y WG  ++  G LG G   +  IP  I   +E L   F      G   
Sbjct: 404 FHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFV---TCGPWH 460

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  +T  G++ ++G G  G LGHG   +I           PR ++ L G++    A G  
Sbjct: 461 TALITSTGQLFTFGDGTFGVLGHGDRENI---------SYPREVESLSGLRTVSVACGVW 511

Query: 249 HSACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
           H+A I E           +G+++ +GD   +++   + +    P+ IS L  Y+   + C
Sbjct: 512 HTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDYNFHRIAC 571

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TA 354
           G   T  LT+ G ++T GS   G LG    D    P  V+   +   V++++CG  H T 
Sbjct: 572 GHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDG-KLPCLVEDKLAGECVEEIACGAYHVTV 630

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
             S  ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N
Sbjct: 631 LTSRNEVYTWGKGAN------------GRLGHGDVEDRKTPTLVEALKDRHVKYIACGSN 678

Query: 415 HTGAL 419
           ++ A+
Sbjct: 679 YSAAI 683



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 113/219 (51%), Gaps = 26/219 (11%)

Query: 218 LGFLRSTSEYTPR----LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G  ++ S  +PR    L K LE    + V   A G  H+A +   G ++ +G+ +  ++
Sbjct: 315 VGADKNVSYCSPRTDILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRL 374

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G +  +P L+  L  S  + V CG +HTC +T  GE+YTWG  ++  G LG G+ D
Sbjct: 375 GHGVGKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGT-D 433

Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
           V H  P+R+ GP     V  V+CG  HTA I S G++ T+G     GTF        G L
Sbjct: 434 VSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFG----DGTF--------GVL 481

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 482 GHGDRENISYPREVESLSGLRTVSVACGVWHTAAIVEVI 520



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 133/306 (43%), Gaps = 53/306 (17%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+    +  ++G  K  +   P     +P  +E    +   Q A G + +  VT
Sbjct: 299 GDVYIWGEVISENVVKVGADKNVSYCSPRTDILLPKPLESNVVLDVLQIACGVKHAALVT 358

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG    GRLGHG   +++          P L++ L    V   A G  H+  +
Sbjct: 359 RQGEMFTWGEESGGRLGHGVGKNVV---------QPCLVEALASSTVDFVACGEFHTCAV 409

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTS 305
              G +Y +GD   +  L   G       P  I+      ++ +   V CG +HT ++TS
Sbjct: 410 TMAGEIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAF---VTCGPWHTALITS 466

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------- 358
            G+L+T+G    G LG G  + +  P  V+   S      V+CG  HTAAI E       
Sbjct: 467 TGQLFTFGDGTFGVLGHGDRENISYPREVES-LSGLRTVSVACGVWHTAAIVEVIVTQSS 525

Query: 359 -----GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
                GK+ TWG G  +            +LGHG+    + PT ++   +    +++CG 
Sbjct: 526 ASISSGKLFTWGDGDKN------------RLGHGDKDARLEPTCISALIDYNFHRIACGH 573

Query: 414 NHTGAL 419
           + T  L
Sbjct: 574 SLTVGL 579


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 151/306 (49%), Gaps = 22/306 (7%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQIS 129
           ++L   A G  H+L L   G V + G N  GQLG  +      +P RI  L+   V  +S
Sbjct: 23  NTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG-RKGTPRGEQPERIPALETLNVALVS 81

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS A+   G ++ WG  S GQLG+G+       IP K++ L+GI   Q A G   S
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTF-IPKKIKTLAGIKIIQVACGHYHS 140

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           VA++  G+V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  H
Sbjct: 141 VALSEDGQVFSWGTNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGHH 192

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPY--SEEVVCGGYHTCVL 303
           S  +  +G  + +G  +  ++    GN+A     +P  I  L       + CG  HT VL
Sbjct: 193 SFALSLSGTSFGWGSNSAGQLALS-GNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKI 361
           T  G+++T+G N  G LG         P+ V+    E  V Q+ CG  HT A   + G++
Sbjct: 252 TQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVER--IEGLVSQIDCGSDHTLAYIYTTGQV 309

Query: 362 LTWGWG 367
           +++G G
Sbjct: 310 VSFGRG 315



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG        +P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +  P +I  L   +++Q++ G++HS A++ DG+++ WG NS+GQLGLGK+  
Sbjct: 108 GIGEFKETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL------ALSGNNA 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 221 PVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG  HT   + + G++ ++G
Sbjct: 281 LVERIEGLVSQIDCGSDHTLAYIYTTGQVVSFG 313



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 150/308 (48%), Gaps = 41/308 (13%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           ++Q ++G HHS  +  DG +   G NS GQLG  +K       P ++  L  +     + 
Sbjct: 25  LLQAASGEHHSLLLLSDGTVQSCGDNSRGQLG--RKGTPRGEQPERIPALETLNVALVSC 82

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E S+AV   G+V +WGA   G+LG G+      F  +T  + P+ IK L G+K+   A
Sbjct: 83  GKEHSLAVCHKGRVFAWGAASEGQLGIGE------FKETT--FIPKKIKTLAGIKIIQVA 134

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
            G  HS  + E+G+V+ +G  +  ++     F      +R   +  +P ++ V  GG+H+
Sbjct: 135 CGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQ-VAAGGHHS 193

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-----VDQVSCGWKHTAA 355
             L+  G  + WGSN  G L +   +   +P +   P S        V  +SCG+KHTA 
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNN---APVQRYKPVSIGALKTLGVVSISCGYKHTAV 250

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCG 412
           ++ +GK+ T+            G +S GQLGH    +   P +V   E ++ L  Q+ CG
Sbjct: 251 LTQDGKVFTF------------GDNSYGQLGHDPTAEKRGPQLV---ERIEGLVSQIDCG 295

Query: 413 FNHTGALL 420
            +HT A +
Sbjct: 296 SDHTLAYI 303



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/212 (34%), Positives = 107/212 (50%), Gaps = 19/212 (8%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+ +G  +  G N  G
Sbjct: 152 WGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAG 211

Query: 102 QLGISENIG--YSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S N       +P+ I  LK   VV IS GY H++ +T DG+++ +G NS GQLG  
Sbjct: 212 QLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHD 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGG--SGRLGH-GQE 214
             A K    P  VE + G+ + Q   G + ++A +   G+V+S+G G   + R  H G E
Sbjct: 272 PTAEK--RGPQLVERIEGLVS-QIDCGSDHTLAYIYTTGQVVSFGRGPGCASRSPHPGAE 328

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           SS +  L S         K+L  V+VK   AG
Sbjct: 329 SSDISCLVSA--------KDLADVQVKHIFAG 352


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 168/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  V +QI  G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S G++  +G G            S GQLG  +    + P
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLMLP 346

Query: 396 TIV 398
            +V
Sbjct: 347 QVV 349



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +     G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S  D+ H   P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 223 ----GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE       +  + Q+ CG +H+ A+S+ G++L+WG             +  GQLGH  
Sbjct: 84  IPE-----LQDYVIIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHAT 126

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D + +  P +V        +Q++CG NH+ AL
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 361
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V QV+CG +HT  ++    
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLT---- 56

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  + G     G +   QLGH  D+    P ++   ++   +Q+ CG  H+ AL +
Sbjct: 57  -------ATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSD 107

Query: 422 Y 422
           +
Sbjct: 108 W 108


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 184/394 (46%), Gaps = 51/394 (12%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        LA GG  +LF +T  G ++ATG    
Sbjct: 2982 WGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLA-GGEQSLFAVTPDGKLFATGYGSG 3039

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LG+     +++ P  +  L+   V+   +++G  H  A+T +GE+Y WG+  +G+LG 
Sbjct: 3040 GRLGVGGADSWAI-PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGH 3098

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  VE L+G+     A G   S A+T  G VL+WG G  GRLGHG     
Sbjct: 3099 GNRMS--YDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGD---- 3152

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 3153 -----SEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL----- 3202

Query: 276  NHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               R  S   KLPY  E         V CG   +  LT  G +YTW   +   LG GS+D
Sbjct: 3203 --GRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVD 3260

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
             +  P++V        +  ++ G  H  A S+ G++ TW            G +  GQLG
Sbjct: 3261 HVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTW------------GDNDEGQLG 3307

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G       P +V   +    ++V+CG  HT AL
Sbjct: 3308 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 151/340 (44%), Gaps = 30/340 (8%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +   P       ++ +K +A   GG H L LT  G V++ G  + G
Sbjct: 1890 GEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDG 1949

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG         +P  +  L+ K++  ++ G  HS+AI+  GELY WG    G+LG G  
Sbjct: 1950 KLGHGNRTTLD-KPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDN 2008

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A ++ P    V  L+G    Q A G    Q++A+T  G V SWG G  G+LG G      
Sbjct: 2009 ATQLKP--KLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG----- 2061

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S    TP  I+ L G+ V     G   S  +   G V+ +G     ++      H 
Sbjct: 2062 ----SEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV 2117

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R+P  I  L       V  G  H   +T  G++Y WG N++G  G G+  V   P  V G
Sbjct: 2118 RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIG 2177

Query: 337  PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
                  V++V+CG  H+ A          WG  + T  E+
Sbjct: 2178 -LDAVFVNRVACGSSHSIA----------WGLPNATLEEE 2206



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 133/293 (45%), Gaps = 20/293 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL--RISGLKKEVVQISTGY 132
            A+  GG H L LT  G VYA G  + G+LG    + Y    L   ++G+   V  I+ G 
Sbjct: 3068 AVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMN--VADIACGS 3125

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSV 190
             HS+AIT  G +  WGK   G+LG G    ++ P    VE L G      A G    Q++
Sbjct: 3126 AHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRP--QLVEALLGYRAIDIACGSGDAQTL 3183

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S
Sbjct: 3184 CITDDDNVWSWGDGDYGKLGRGG---------SDGCKLPYKIESLAGLGVIKVECGSQFS 3234

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
              + ++G VY +      ++     +H RRP  ++ L   +   +  G  H    +  GE
Sbjct: 3235 VALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGE 3294

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +YTWG N+ G LG G++  +  P R+        + +V+CG  HT A+S  ++
Sbjct: 3295 VYTWGDNDEGQLGDGTVTAIQRP-RLVAALQGKHIVKVTCGSAHTLALSTSQL 3346



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 21/265 (7%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +        ++ +ACG +H+  ++  G +Y  GL ++G+
Sbjct: 1943 WGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGR 2002

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  ++ L  + V+Q++ G   +   A+T DG ++ WG    G+LG G 
Sbjct: 2003 LGHGDN-ATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGG 2061

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                    P ++E LSGI   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 2062 SEGS--DTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHV-- 2117

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-- 277
                     P+ I  L G +V   A G LH   + + G+VY +GD   D      GN   
Sbjct: 2118 -------RKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDN--DHGQQGSGNTFV 2168

Query: 278  ARRPSLISKLP--YSEEVVCGGYHT 300
             ++P+L+  L   +   V CG  H+
Sbjct: 2169 NKKPALVIGLDAVFVNRVACGSSHS 2193



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 165/349 (47%), Gaps = 34/349 (9%)

Query: 79   GGAHTLFLT-ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF+  + G VYA G    G+LG+       L P ++  L + VV+   + +G  H
Sbjct: 1872 GGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPL-PHQLPVLHQYVVKKVAVHSGGKH 1930

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+T+DG+++ WG+  +G+LG G +    +  P  VE L     +  A G   S A++ 
Sbjct: 1931 ALALTLDGKVFSWGEGEDGKLGHGNRT--TLDKPRLVETLRSKKIRDVACGSSHSAAISS 1988

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG  ++ L          P+L+  L G +V   A G     +  
Sbjct: 1989 QGELYTWGLGEYGRLGHGDNATQL---------KPKLVAALAGRRVIQVACGSRDAQTLA 2039

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            + E+G V+ +GD    K+       +  P  I +L      ++ CG   +  LT  GE++
Sbjct: 2040 LTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVW 2099

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G    +  P+ + G      V  V+ G  H  A+++ G++  WG    
Sbjct: 2100 TWGKGDYYRLGHGGDQHVRKPQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWG---- 2154

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G GN      P +V   + V   +V+CG +H+ A
Sbjct: 2155 -----DNDH---GQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 59/351 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V   GLND  QLG            S+ I   L P+ I+G  K +  +            
Sbjct: 1834 VMVWGLNDKEQLGGLKGSKVKVPTFSQTIS-RLRPIHIAGGSKSLFIVGQ---------- 1882

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            +G++Y  G+ +NG+LGLG      +P+P ++  L     K+ A+  G + ++A+T  GKV
Sbjct: 1883 NGKVYACGEGTNGRLGLG--VTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKV 1940

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  +++           PRL++ L   K++  A G  HSA I   G 
Sbjct: 1941 FSWGEGEDGKLGHGNRTTL---------DKPRLVETLRSKKIRDVACGSSHSAAISSQGE 1991

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P L++ L      +V CG     T  LT  G +++WG 
Sbjct: 1992 LYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGD 2051

Query: 315  NENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
             + G LG G     D  H  ER+ G      V Q+ CG + + A++  G++ TWG G  +
Sbjct: 2052 GDFGKLGRGGSEGSDTPHEIERLSG----IGVIQIECGAQFSLALTRAGEVWTWGKGDYY 2107

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG D     P  +      + + V+ G  H  A+ +
Sbjct: 2108 ------------RLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTD 2146



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            W  GD+ RLG GS++   RP   +A +   + ++A G  H +  +++G VY  G ND GQ
Sbjct: 3246 WSKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQ 3305

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
            LG    +     P  ++ L+ K +V+++ G  H+ A++ 
Sbjct: 3306 LG-DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 3343


>gi|383319251|ref|YP_005380092.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320621|gb|AFC99573.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 447

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 147/311 (47%), Gaps = 20/311 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG G+ E+   PV  +      +KA++ G   +L L   G V+A G N +GQ
Sbjct: 94  WGSNSYGELGDGTNENSIEPVQVAGLT--GVKAISAGKGFSLALKGDGSVWAWGSNTYGQ 151

Query: 103 LGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG +  +   SL P+++ GL+  VV IS G  H  A+  +G L+ WG+NS+G LG G   
Sbjct: 152 LGKNPLSFMGSLTPIQVEGLEG-VVSISCGGSHCFALQENGVLWAWGENSHGILGDGTNE 210

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG----QESSI 217
           ++  P+  K++ +      +       ++AV   G V +WG    G+LG G     +   
Sbjct: 211 SQFKPVKPKIKDVKAFDAGE----LSHALAVKEDGSVWAWGFNYKGQLGTGGVSLSDQGR 266

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE--G 275
           +   R    Y P +++ +     K  AAG  HS  +  +G V+ +G  +  ++      G
Sbjct: 267 ISLGREADNYNPDIVRGVS--DAKAVAAGGSHSVALASDGSVWAWGSNSDGQLGLGHAGG 324

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV- 334
           +    P+ +  +     +  G YHT  L   G ++ WGSN +G LG  S     SP  + 
Sbjct: 325 SDVTSPTRVQGIEGVTAIAAGMYHTLALKGDGSVWAWGSNSDGQLGNASFSAASSPVPIL 384

Query: 335 ---QGPFSESP 342
              Q P + SP
Sbjct: 385 IGPQIPTAASP 395



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 129/306 (42%), Gaps = 38/306 (12%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L  + V I+     S A+  DG ++ WG+  +G              P +V+ +SG+  +
Sbjct: 26  LSPQAVAIAASNCTSVALLEDGSVWQWGRVCDG---------VEWSAPQRVD-ISGV--R 73

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVK 239
           Q A G    +A+ G G V +WG+   G LG G  E+SI           P  +  L GVK
Sbjct: 74  QIAAGSGHVLALKGDGTVWAWGSNSYGELGDGTNENSI----------EPVQVAGLTGVK 123

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGG 297
              A  GF  S  +  +G V+ +G     ++     +   +  P  +  L     + CGG
Sbjct: 124 AISAGKGF--SLALKGDGSVWAWGSNTYGQLGKNPLSFMGSLTPIQVEGLEGVVSISCGG 181

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAI 356
            H   L   G L+ WG N +G LG G+ +    P + +       V     G   H  A+
Sbjct: 182 SHCFALQENGVLWAWGENSHGILGDGTNESQFKPVKPK----IKDVKAFDAGELSHALAV 237

Query: 357 SE-GKILTWGWG--GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            E G +  WG+   G  GT      S  G++  G + D  +P IV    + KA  V+ G 
Sbjct: 238 KEDGSVWAWGFNYKGQLGTGGVS-LSDQGRISLGREADNYNPDIVRGVSDAKA--VAAGG 294

Query: 414 NHTGAL 419
           +H+ AL
Sbjct: 295 SHSVAL 300


>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Megachile rotundata]
          Length = 864

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 180/372 (48%), Gaps = 38/372 (10%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   + S F   K  + ++ CG  H+  + ++G ++  G ND+GQLG+      S +P
Sbjct: 92  SRFADNIASHFFIRKDPVVSITCGDEHSAVICQSGRLFVFGSNDWGQLGLGHRNHIS-KP 150

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   T   +++  G +  GQLG G  A   +   P+    
Sbjct: 151 SCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEGQLGRGTSAIGDSSSSPVLVYD 210

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             L+G    Q A G   S+A+   G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 211 AGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 268

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++        +AG+ HSA + E+G VYI G+    K+        +      +LP   
Sbjct: 269 VKQI--------SAGYYHSAFLTESGLVYICGESESGKLGIDVNFSTQITPKQMQLPSPA 320

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
             V CGG+HT VL   G +Y  GSN NG LG+G+ +  LH+P+ + +G      + ++SC
Sbjct: 321 VHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVTELHTPKLLSRGMLQNETISRISC 380

Query: 349 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  HTA ++E GK+ T G  G H           G+LG   + + +H   + F +  K L
Sbjct: 381 GESHTAIVTESGKLFTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRYKEL 426

Query: 408 ---QVSCGFNHT 416
              +V+CG  HT
Sbjct: 427 FVSKVACGGCHT 438



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 161/323 (49%), Gaps = 25/323 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG      +P      +   +  +ACG AHTL  T    ++A G +  G
Sbjct: 130 VFGSNDWGQLGLGHRNHISKPSCVKVLKPEKVTHVACGRAHTLISTGAQKIFACGSDQEG 189

Query: 102 QLGI-SENIG-YSLEPLRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           QLG  +  IG  S  P+ +  +GL   +++Q++ G HHS A+  DG ++ WG N  GQLG
Sbjct: 190 QLGRGTSAIGDSSSSPVLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLG 249

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           L    + ++  PTKV     +  KQ + G+  S  +T  G V   G   SG+LG      
Sbjct: 250 L-PDVSGLVNKPTKVHIPEPV--KQISAGYYHSAFLTESGLVYICGESESGKLGID---- 302

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
            + F   +++ TP+ + +L    V +A  G  H+  + ENG +Y  G  +  ++ L    
Sbjct: 303 -VNF---STQITPKQM-QLPSPAVHVACGGH-HTVVLAENGNIYCTGSNSNGQLGLGTNV 356

Query: 276 NHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS 330
                P L+S+     E +    CG  HT ++T  G+L+T G   +G LG+  + + +H 
Sbjct: 357 TELHTPKLLSRGMLQNETISRISCGESHTAIVTESGKLFTCGDGRHGKLGLEENENNVHE 416

Query: 331 PERVQGPFSESPVDQVSCGWKHT 353
              VQ  + E  V +V+CG  HT
Sbjct: 417 LTFVQR-YKELFVSKVACGGCHT 438


>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
            (RCC1) repeat [Roseburia intestinalis XB6B4]
          Length = 1546

 Score =  122 bits (306), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 47/356 (13%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG  D+G++G G+ ++R++P   +    H + +++ G  ++  +T+ G +Y  G N +G
Sbjct: 762  MWGVNDFGQIGDGTTKNRYKP---TKILDHVV-SVSLGDYYSGAITQDGSLYMWGSNVYG 817

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G     G + +  + + +   V+ +S GY HS AIT DG LYMWG N +GQ+G G   
Sbjct: 818  QIGD----GTTEDRYKPTKILDHVIAVSLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTE 873

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +    PTK+  L  +     +LG   S A+T  G +  WG+   G +G G         
Sbjct: 874  DRY--KPTKI--LDHVIA--VSLGVSHSGAITQDGSLYMWGSNSRGGIGDG--------- 918

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              T+E   +  K L+ V       G  +S  I ++G +Y++G     ++   +G    R 
Sbjct: 919  --TTEVRYKPTKILDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEI--GDGTEEDRY 972

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                 L +   V  G  H+  +T  G LY WG N  G +G G+ +  + P ++       
Sbjct: 973  KPTKILDHVIAVSLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPTKIL-----D 1027

Query: 342  PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
             V  VS G  H+ AI++ G +  WGW            +S GQ+G G       PT
Sbjct: 1028 HVIAVSLGVGHSGAITQDGSLYMWGW------------NSDGQIGDGTTKARYTPT 1071



 Score =  114 bits (286), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 29/296 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG+  YG++G G+ E R++P   +    H + A++ G  H+  +T+ G +Y  G ND G
Sbjct: 810  MWGSNVYGQIGDGTTEDRYKP---TKILDHVI-AVSLGYCHSGAITQDGSLYMWGSNDSG 865

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G     G + +  + + +   V+ +S G  HS AIT DG LYMWG NS G  G+G   
Sbjct: 866  QIGD----GTTEDRYKPTKILDHVIAVSLGVSHSGAITQDGSLYMWGSNSRG--GIGDGT 919

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +V   PTK+  L  +       G   S A+T  G +  WG+   G +G G E       
Sbjct: 920  TEVRYKPTKI--LDHVIAVSLQTG--NSGAITQDGSLYMWGSNVYGEIGDGTEED----- 970

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                 Y P  I +     V   + G  HS  I ++G +Y++G     ++   +G    R 
Sbjct: 971  ----RYKPTKILD----HVIAVSLGDDHSGAITQDGSLYMWGRNYYGEI--GDGTEEDRY 1020

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
                 L +   V  G  H+  +T  G LY WG N +G +G G+    ++P ++  P
Sbjct: 1021 KPTKILDHVIAVSLGVGHSGAITQDGSLYMWGWNSDGQIGDGTTKARYTPTQITIP 1076



 Score =  111 bits (277), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 99/350 (28%), Positives = 160/350 (45%), Gaps = 49/350 (14%)

Query: 74   KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            + L+ G  H+  + + G +Y  G+NDFGQ+G     G +    + + +   VV +S G +
Sbjct: 742  QVLSLGDYHSGVIAQDGSLYMWGVNDFGQIG----DGTTKNRYKPTKILDHVVSVSLGDY 797

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            +S AIT DG LYMWG N  GQ+G G    +    PTK+  L  +     +LG+  S A+T
Sbjct: 798  YSGAITQDGSLYMWGSNVYGQIGDGTTEDRY--KPTKI--LDHVIA--VSLGYCHSGAIT 851

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G +  WG+  SG++G G          +   Y P  I +     V   + G  HS  I
Sbjct: 852  QDGSLYMWGSNDSGQIGDGT---------TEDRYKPTKILD----HVIAVSLGVSHSGAI 898

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             ++G +Y++G  +   +   +G    R      L +   V     ++  +T  G LY WG
Sbjct: 899  TQDGSLYMWGSNSRGGI--GDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWG 956

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
            SN  G +G G+ +  + P ++        V  VS G  H+ AI++ G +  W        
Sbjct: 957  SNVYGEIGDGTEEDRYKPTKIL-----DHVIAVSLGDDHSGAITQDGSLYMW-------- 1003

Query: 373  FSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 421
                G +  G++G G + D   PT I++       + VS G  H+GA+ +
Sbjct: 1004 ----GRNYYGEIGDGTEEDRYKPTKILD-----HVIAVSLGVGHSGAITQ 1044



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 63/282 (22%)

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
           +++  +LG   S  +   G +  WG    G++G G          + + Y P  I +   
Sbjct: 740 YSQVLSLGDYHSGVIAQDGSLYMWGVNDFGQIGDGT---------TKNRYKPTKILD--- 787

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
             V   + G  +S  I ++G +Y++G     ++   +G    R      L +   V  G 
Sbjct: 788 -HVVSVSLGDYYSGAITQDGSLYMWGSNVYGQI--GDGTTEDRYKPTKILDHVIAVSLGY 844

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            H+  +T  G LY WGSN++G +G G+ +  + P ++        V  VS G  H+ AI+
Sbjct: 845 CHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPTKIL-----DHVIAVSLGVSHSGAIT 899

Query: 358 E-GKILTWGWG------------------------------GSHGTFSED------GHSS 380
           + G +  WG                                G+ G  ++D      G + 
Sbjct: 900 QDGSLYMWGSNSRGGIGDGTTEVRYKPTKILDHVIAVSLQTGNSGAITQDGSLYMWGSNV 959

Query: 381 GGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGFNHTGALLE 421
            G++G G + D   PT I++       + VS G +H+GA+ +
Sbjct: 960 YGEIGDGTEEDRYKPTKILD-----HVIAVSLGDDHSGAITQ 996


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 168/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  V +QI  G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 D-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S G++  +G G            S GQLG  +    + P
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLMLP 346

Query: 396 TIV 398
            +V
Sbjct: 347 QVV 349



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +     G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S  D+ H   P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 223 ----GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 258



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE       +  + Q+ CG +H+ A+S+ G++L+WG             +  GQLGH  
Sbjct: 84  IPE-----LQDYVIIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHAT 126

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D + +  P +V        +Q++CG NH+ AL
Sbjct: 127 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 361
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V QV+CG +HT  ++    
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLT---- 56

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  + G     G +   QLGH  D+    P ++   ++   +Q+ CG  H+ AL +
Sbjct: 57  -------ATGKVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSD 107

Query: 422 Y 422
           +
Sbjct: 108 W 108


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 166/363 (45%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E+     P          ++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 6   WGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDH 65

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QI+ G  HS A+T  G++  WG N  GQ+G   
Sbjct: 66  HQLGHELP---TKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQVG-HS 121

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               VI +P  +  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 122 TDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDL-- 179

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  +  + G+ +   A G  HS  I ++  V+ +G     ++   +  +  
Sbjct: 180 ----PHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQNRA 235

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            PS +  +       V CG  ++  LT+ G ++T G+   G LG G  +    P R+   
Sbjct: 236 YPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP-RMVIE 294

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S G++ ++G G S            GQLG  N +    P
Sbjct: 295 LMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS------------GQLGTRNTISQTLP 342

Query: 396 TIV 398
            +V
Sbjct: 343 KVV 345



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 142/301 (47%), Gaps = 20/301 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           GN D+ +LG   L ++ RP+     + + +  +ACG  H++ LTE G + + G ND GQ+
Sbjct: 61  GNNDHHQLG-HELPTK-RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDNDCGQV 118

Query: 104 GIS-ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G S +N    L  +    + + VVQI+ G +HS A+T  GELY WG N  GQLG+  ++ 
Sbjct: 119 GHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV--QSP 176

Query: 163 KVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K +P    P ++  + GI     A G   S  ++    V  WG    G+LG   E     
Sbjct: 177 KDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQLGLNDEQ---- 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                +   P  +K +  + V+    G  +S  +   G V+  G     ++     N+  
Sbjct: 233 -----NRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEM 287

Query: 280 RPSLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P ++ +L  S   +V CG  HT  L  SGG +Y++G   +G LG  +      P+ V G
Sbjct: 288 IPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347

Query: 337 P 337
           P
Sbjct: 348 P 348



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 126/275 (45%), Gaps = 29/275 (10%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           LY WG  S+GQLGLG    + I +P+++E       +Q A G   ++ +T  G+V + G 
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               +LGH   +             P  I EL+   V   A G  HS  + E G++  +G
Sbjct: 63  NDHHQLGHELPTK-----------RPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG 111

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCL 320
           D    ++     N       I +   S  VV   CG  H+  LTS GELY+WGSN  G L
Sbjct: 112 DNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQL 171

Query: 321 GIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           G+ S  D+ HS  P R+       P+  ++CG  H+  IS+   + +GW          G
Sbjct: 172 GVQSPKDLPHSNAPLRLTTILG-IPLATIACGGNHSFLISKSSAV-FGW----------G 219

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            ++ GQLG  ++ +  +P+ +     +    V+CG
Sbjct: 220 KNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCG 254



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 27/154 (17%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           E      PS I   P S  +++ CG  HT  LT+ G++Y  G+N++  LG       H  
Sbjct: 20  ENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNNDHHQLG-------HEL 72

Query: 331 PERVQGPFSESP---VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 386
           P +   P  E     V Q++CG +H+ A++E G+IL+WG             +  GQ+GH
Sbjct: 73  PTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWG------------DNDCGQVGH 120

Query: 387 GNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
             D D I  P I+ F  +   +Q++CG NH+ AL
Sbjct: 121 STDNDVIELPKILRFLVSRTVVQIACGNNHSLAL 154


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 20/329 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G LGLG +E    + P     FE  S+   A G  HTLFLT+ G VY+ G ND+
Sbjct: 4   WGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDY 63

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  +       P  +SGL    ++ ++ G  HS A++  GE++ WG ++ GQLG  +
Sbjct: 64  GQLGHDQP---RKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYGQLG-HQ 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               +  +P  ++ L+     Q A G   SVA+T  G++  WGA   G+LG G       
Sbjct: 120 LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQLGLGT------ 173

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
              +  E TP  +  L G+   + A G  H+  + ++G V+ +G     ++   +    +
Sbjct: 174 --ITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLGLNDTVSKK 231

Query: 280 RPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L  S    + CG   +  LT  G +++ G+   G LG G       P +V   
Sbjct: 232 FPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLE- 290

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTW 364
              S + Q+SCG +H+ A   S G++ ++
Sbjct: 291 LMGSTITQISCGRQHSLAFVPSRGRVYSY 319



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 123/272 (45%), Gaps = 25/272 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   +G+LGLG    + +  P  ++        +AALG   ++ +T  GKV S G+
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH Q               P+L+  L+   +   A G +HS  +   G V+ +G
Sbjct: 61  NDYGQLGHDQPRK-----------RPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWG 109

Query: 264 DRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                ++  Q G   +  P LI  L   +  ++  G  H+  LT+ GE++ WG+N+ G L
Sbjct: 110 SDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFGQL 169

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSS 380
           G+G+I    S        S  P   ++CG  HT A+S+   + +GW          G + 
Sbjct: 170 GLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAV-FGW----------GKNI 218

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            GQLG  + V    PT +    N +   +SCG
Sbjct: 219 NGQLGLNDTVSKKFPTQLRTLRNSRVRFISCG 250



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 25/223 (11%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG+   G LG       LG +     +TP+ +   E   V  AA G  H+  + ++G+VY
Sbjct: 4   WGSTIHGELG-------LGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVY 56

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKL-PYSE-EVVCGGYHTCVLTSGGELYTWGSNENG 318
             G     ++   +    +RP L+S L  YS   V CG  H+  L+  GE+++WGS+  G
Sbjct: 57  SCGSNDYGQLGHDQPR--KRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGSDNYG 114

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
            LG      L    ++    ++  V Q++ G +H+ A++  G+I  WG            
Sbjct: 115 QLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWG------------ 162

Query: 378 HSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
            +  GQLG G    Y   PT V     +    ++CG NHT A+
Sbjct: 163 ANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAV 205



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 42  LWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG  D+G+LGLG++      P    +        +ACG  HT  ++++G V+  G N  
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG+++ +     P ++  L+   V+ IS G   S+ +T+DG ++  G    GQLG G 
Sbjct: 220 GQLGLNDTVSKKF-PTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSW 201
            + ++  +P +V  L G    Q + G + S+A V   G+V S+
Sbjct: 279 TSNEI--LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSY 319


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 147/305 (48%), Gaps = 22/305 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
           +T+G N +G L          P+ ++G      V Q+ C   HT A   + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314

Query: 368 GSHGT 372
            SH +
Sbjct: 315 PSHTS 319



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 35/304 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P P  ++ L+ +     +
Sbjct: 23  ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+   
Sbjct: 81  CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
           + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+   E     +V  GG 
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           H+  L+  G  + WGSN +G L +    V   ++ P  + G      V  +SCG++HTA 
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ EG++ T+G G S G       S  GQ G         P ++  G   +  Q+ C   
Sbjct: 250 LTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQIECASY 296

Query: 415 HTGA 418
           HT A
Sbjct: 297 HTIA 300



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 32/256 (12%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
           L  + V + + G  HS  +   G+V+ +G  +  ++    F+E +    P+ I  L   +
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSC 348
             +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ QV+ 
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAA 187

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNFGENVK 405
           G  H+ A+S     ++GWG +            GQL   GN V      P  +   +N+ 
Sbjct: 188 GGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGALKNLS 236

Query: 406 ALQVSCGFNHTGALLE 421
            + +SCG+ HT  L E
Sbjct: 237 VIYISCGYEHTAVLTE 252



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           PR +K    G+++  AA+G  HS  +  N RVY  GD +  ++  +      RP  I  L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
              + + V CG  H+  +   G+++ WG+   G LGIG   ++   P +++   +   + 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 402
           QVSCG  H+ A+SE G + +W            G +S GQLG G N      P  V   E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 403 NVKALQVSCGFNHTGAL 419
            +   QV+ G  H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSR--NIPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   +V  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + VS G +H  AL
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDVSIGDSHCLAL 680



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 653

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 654 LR------PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSM 694



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V +S G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 650 EATALR-PKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 41.2 bits (95), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVTI--GKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
 gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
          Length = 390

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 170/387 (43%), Gaps = 38/387 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG G LE  + P +          S+  LACGGAH + LT  G V+  G   
Sbjct: 19  WGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTWGRGT 78

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  E +  SL P  +S L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 79  TGQLGHGEMLN-SLHPKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFTCGDGSFGQLGQG 137

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++  P+  KV+  +  F  Q A G   S+ +  G +V  +G+G  G+LG  ++    
Sbjct: 138 NYRSQSTPV--KVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGKRGQLGISRD---- 191

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              ++ S   P++   LE V++   +A   HSA I  +G +Y +G        F   + A
Sbjct: 192 ---KTKSINLPQVTCGLEDVQIVSISANGDHSAAISADGHLYTWGRG------FAGASDA 242

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL-GIGSID-VLHSPERVQG 336
             P L        +   G  H  +LT   E+   G N +G L  +  +  V H PE   G
Sbjct: 243 NFPQLSLSSLRCTKAALGWNHGLLLTGDEEVLMLGGNYHGVLCDLEKMSAVKHRPEDSPG 302

Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
                 +          AA +E   LTWGWG              GQLG GN  D   P 
Sbjct: 303 TALNEVIGLDGVKVVKIAAGAEHSALTWGWG------------EHGQLGLGNTNDQTIPQ 350

Query: 397 IVNFGENVK----ALQVSCGFNHTGAL 419
            V+   +++    +L V CG   T A+
Sbjct: 351 TVSLIPDIQNKEASLNVYCGSGFTFAI 377



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 22/234 (9%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSW 201
           +++ WG  + GQLG GK   + +P    +  LS   +    A G    +A+T GG+V +W
Sbjct: 15  QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTSGGRVFTW 74

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G +G+LGHG+   +L  L       P+ +  L+   +   +AG+ HS  + + G ++ 
Sbjct: 75  GRGTTGQLGHGE---MLNSLH------PKPVSSLQSCVITHVSAGWSHSGFVSDIGLLFT 125

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPY-----SEEVVCGGYHTCVLTSGGELYTWGSNE 316
            GD +  ++   +GN+ R  S   K+ Y       ++ CG  H+ VL +G ++Y +GS +
Sbjct: 126 CGDGSFGQL--GQGNY-RSQSTPVKVDYFANNFVNQIACGMRHSLVLLNGNQVYGFGSGK 182

Query: 317 NGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
            G LGI       ++ P+   G   +  +  +S    H+AAIS +G + TWG G
Sbjct: 183 RGQLGISRDKTKSINLPQVTCG-LEDVQIVSISANGDHSAAISADGHLYTWGRG 235



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 63/131 (48%), Gaps = 16/131 (12%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWK 351
           + CGG H   LTSGG ++TWG    G LG G  ++ LH P+ V        +  VS GW 
Sbjct: 55  LACGGAHVIALTSGGRVFTWGRGTTGQLGHGEMLNSLH-PKPVS-SLQSCVITHVSAGWS 112

Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           H+  +S+ G + T G     G+F        GQLG GN      P  V++  N    Q++
Sbjct: 113 HSGFVSDIGLLFTCG----DGSF--------GQLGQGNYRSQSTPVKVDYFANNFVNQIA 160

Query: 411 CGFNHTGALLE 421
           CG  H+  LL 
Sbjct: 161 CGMRHSLVLLN 171


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 139/289 (48%), Gaps = 28/289 (9%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           GN  YG LG G   S   P    A    S+K  A G G H L LTE G VY+ G ND+ +
Sbjct: 52  GNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCE 111

Query: 103 LGISENIGYSLEPLRI-SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + +    L P  I S L  E VV I+ G HHS A+T  GE+Y WG N +GQ+G G  
Sbjct: 112 LG-NRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTI 170

Query: 161 AAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + V PIP  +   L+G      + G   SVAVT  G+V SWG  G G+LG G       
Sbjct: 171 LSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIG------- 223

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               TS+  P+ +     + ++    G++H+  + + G +Y++G  +  ++     ++  
Sbjct: 224 --NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVW 281

Query: 280 RPSLISKLPYSE-----EVVCGGYH--TCVLTSGGELYTWGSNENGCLG 321
            P   +KL   E     ++    YH  +  ++ G  ++ WG     CLG
Sbjct: 282 IP---TKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ----CLG 323



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 20/292 (6%)

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGY-HHSSAITV 140
           TL +T+   VY  G N +G LG  +    ++ P +I  L  K V   + G   H  A+T 
Sbjct: 39  TLIVTKDDMVYGIGNNTYGCLGTGDTHS-TIYPKKIEALCGKSVKTFAYGKGPHVLALTE 97

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           +G++Y WG N   +LG       + P  IP+    L+  F    A G   S+A+T  G+V
Sbjct: 98  EGKVYSWGYNDYCELGNRSTNEGLTPTLIPS---ALNNEFVVDIACGGHHSLALTNKGEV 154

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENG 257
            +WG   SG++G        G + ST +  P+L+   L G KV   + G   S  + +NG
Sbjct: 155 YAWGHNVSGQVG-------CGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNG 207

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY +G   V ++          P  ++       E+VVCG  HT  L+  G+LY WG+N
Sbjct: 208 EVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGAN 267

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEG-KILTWG 365
             G LG+ +   +  P ++Q P     +D  +  + H + A+SEG +I  WG
Sbjct: 268 SYGQLGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 5/164 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G++G G++ S  +P+   +        +  ++CG + ++ +T+ G VY+ G N 
Sbjct: 157 WGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNG 216

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLGI  N     EP +++   K V++ +  GY H+ A++ +G+LY+WG NS GQLGL 
Sbjct: 217 VGQLGIG-NCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLN 275

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
             +   IP   +V  +  I     +     S+A++ G ++  WG
Sbjct: 276 TDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWG 319



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 108/239 (45%), Gaps = 28/239 (11%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT    V   G    G LG G   S +          P+ I+ L G  VK  A G 
Sbjct: 38  ETLIVTKDDMVYGIGNNTYGCLGTGDTHSTI---------YPKKIEALCGKSVKTFAYGK 88

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVL 303
             H   + E G+VY +G     ++  +  N    P+LI     +E VV   CGG+H+  L
Sbjct: 89  GPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVDIACGGHHSLAL 148

Query: 304 TSGGELYTWGSNENGCLGIGSI--DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
           T+ GE+Y WG N +G +G G+I   V   P+ +    +   V  +SCG   + A+++ G+
Sbjct: 149 TNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLNGKKVVHISCGDSSSVAVTDNGE 208

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           + +WG            H+  GQLG GN      P  V     +   +V CG+ HT AL
Sbjct: 209 VYSWG------------HNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLAL 255



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 10/134 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG+G+  S+  P   + F K  ++ + CG  HTL L++ G +Y  G N +GQ
Sbjct: 212 WGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQ 271

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLGKK 160
           LG++ +    +   L++  + + +   ++ YHH S A++    ++MWG+       LG+ 
Sbjct: 272 LGLNTDSNVWIPTKLQVPEMGRILDIATSHYHHISLAMSEGNRIFMWGQ------CLGQS 325

Query: 161 AAKVIPIPTKVECL 174
               +P  T ++CL
Sbjct: 326 IK--VPTLTPLKCL 337


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 52/364 (14%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
           ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I       V+++  G 
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGE 360

Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI+ K  + G   + 
Sbjct: 361 FHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIYVKAISCGPWHTA 419

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            VT  GK+ ++G G  G LGHG            S   PR ++ L G +   AA G  HS
Sbjct: 420 FVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGCRTIKAACGVWHS 470

Query: 251 ACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISKLPYS--EEVVCG 296
           A +     V +FG+      LF   +G+  R           PS +++L  +  ++V CG
Sbjct: 471 AAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACG 525

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  L+  G++Y  G+ +       S D++ +P  ++G   +S V +V+CG+ H A +
Sbjct: 526 QSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVL 579

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S+ ++ TWG G            S GQLGHG+      PT+V   +  +  +V CG N+
Sbjct: 580 NSKAEVYTWGKG------------SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNY 627

Query: 416 TGAL 419
           T  +
Sbjct: 628 TATI 631



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 37/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F   +++   CG  HT  +T +G +YA G  D   
Sbjct: 323 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 382

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T +G+L+ +G  + G LG G
Sbjct: 383 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 441

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T +AA G   S AV       T  GK+ +WG G  GRLGH
Sbjct: 442 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 499

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G     L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 500 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 550

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +        R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 551 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 602

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
               P  V+       V +V CG  +TA I   K +T
Sbjct: 603 YRCMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 638



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 35/266 (13%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 289 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 341

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
             P+LI E  G  V++A  G  H+  +  +G +Y +GD   +  L   G   +H +   +
Sbjct: 342 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 399

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + ++   Y + + CG +HT  +TS G+L+T+G    G LG G     + P  V+   +  
Sbjct: 400 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 458

Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
              + +CG  H+AA+        S GK+ TWG G              G+LGHG+    +
Sbjct: 459 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG------------DDGRLGHGDIECRL 506

Query: 394 HPTIVNFGENVKALQVSCGFNHTGAL 419
            P+ V   +     QV+CG + T AL
Sbjct: 507 IPSCVTELDTTSFQQVACGQSITVAL 532



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 18/229 (7%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 258 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 317

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 318 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD 377

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
            ++  G LG+GS      P R+ G      V  +SCG  HTA + SEGK+ T+G     G
Sbjct: 378 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG----DG 433

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           TF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 434 TF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 474


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 173/363 (47%), Gaps = 28/363 (7%)

Query: 8   AMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSA 67
           A +K++LK D+ L    G     + +   + F  ++G+ ++G+LGLG+  +  +P    A
Sbjct: 27  APSKFWLKNDVPLRISCGDEHTALVTENGKLF--MFGSNNWGQLGLGTKTTVNKPTCVKA 84

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVV 126
                +K  ACG  HTL  T  G +YA G N+ GQLG+ + N   S   +     +  + 
Sbjct: 85  LRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIK 144

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            ++ G + S+A+T DG LYM G NS GQ+GLGK++  + P    V    G      + G+
Sbjct: 145 MLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSV----GKRVFWVSCGY 200

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G + ++G   SG+LG   E       +  +   P+ + ++    V++A  G
Sbjct: 201 YHSAFVTVDGALYTFGEKDSGKLGLSTE-------KLANHKVPQQVTDIPDRVVQVACGG 253

Query: 247 FLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKLPYS--EEVVCGGYH 299
             H+  + EN  VY FG     ++     +F+    +R P ++        +   CG  H
Sbjct: 254 G-HTVALTEN-EVYSFGLGQFGQLGHGTFIFE----SRLPRVVEHFRKGRVKHAACGENH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE 358
           T ++T  G LYT+G   +G LG+G  +  +  +    P F +  V  V+CG  H   +++
Sbjct: 308 TALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLAK 367

Query: 359 GKI 361
            + 
Sbjct: 368 PRT 370



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G ++  G N++GQLG+      + +P  +  L+ E V+++  G  H
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVN-KPTCVKALRSERVKLTACGRTH 99

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA-----ALGFEQS 189
           +   T  G LY  G N+ GQLGLG    +          L   F KQ      A G   S
Sbjct: 100 TLVFTSRGNLYACGGNNEGQLGLGDCNDRT------SFHLVEFFNKQGPIKMLAAGSNTS 153

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++   G    G++G G+ES+ L         TP+ +    G +V   + G+ H
Sbjct: 154 AALTQDGRLYMRGDNSEGQIGLGKESNAL---------TPQEVSV--GKRVFWVSCGYYH 202

Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG++   K+ L  E   NH + P  ++ +P    +V CGG HT  LT 
Sbjct: 203 SAFVTVDGALYTFGEKDSGKLGLSTEKLANH-KVPQQVTDIPDRVVQVACGGGHTVALTE 261

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
             E+Y++G  + G LG G+        RV   F +  V   +CG  HTA I++  +L   
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTF 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+     +     V+CG
Sbjct: 321 GDGRHGKLG---------LGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 44/262 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P ++ C           G E +  VT  GK+  +G+   G+LG G ++++         
Sbjct: 37  VPLRISC-----------GDEHTALVTENGKLFMFGSNNWGQLGLGTKTTV--------- 76

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-- 284
             P  +K L   +VK+ A G  H+      G +Y  G     ++   + N      L+  
Sbjct: 77  NKPTCVKALRSERVKLTACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEF 136

Query: 285 -SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            +K    + +  G   +  LT  G LY  G N  G +G+G      +P+ V        V
Sbjct: 137 FNKQGPIKMLAAGSNTSAALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVS---VGKRV 193

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVN 399
             VSCG+ H+A ++ +G + T+G   S            G+LG   +    H     + +
Sbjct: 194 FWVSCGYYHSAFVTVDGALYTFGEKDS------------GKLGLSTEKLANHKVPQQVTD 241

Query: 400 FGENVKALQVSCGFNHTGALLE 421
             + V  +QV+CG  HT AL E
Sbjct: 242 IPDRV--VQVACGGGHTVALTE 261


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 161/339 (47%), Gaps = 37/339 (10%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + E+G V+      FG+   +EN+     P +      + + IS G  H+S +T +G+LY
Sbjct: 8   VPESGAVFT-----FGKCKFAENV-----PSKFWFKNDKPLHISCGDEHTSVVTENGKLY 57

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLG G K A  +  PT V+ L     K AA G   ++  T  G V + G   
Sbjct: 58  MFGSNNWGQLGFGSKNA--VNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNS 115

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G         RST        K+    K+K  AAG   SA + E+G++ ++GD 
Sbjct: 116 EGQLGLGDTEE-----RSTFHLISFFTKQH---KIKQLAAGSYTSAVLTEDGQLVMWGDN 167

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +  ++   +  +   P  +        + CG YH+ ++T  GELYT+G  ENG LG+   
Sbjct: 168 SEGQIGLGDKAYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLSPK 227

Query: 326 DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
            + +   P+ V G   +  V +V+CG  HT  ++EG + T+G G              GQ
Sbjct: 228 QLKNHKLPQLVSGISGK--VSKVACGGGHTVVLAEGDVYTFGLG------------QYGQ 273

Query: 384 LGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           LGHG  V +   P  V+     K   ++CG NHT  + E
Sbjct: 274 LGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITE 312



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 144/298 (48%), Gaps = 41/298 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LG GS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 58  MFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTLICTEQGNVYAAGGNSEG 117

Query: 102 QLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+ +    S   L IS   K+  + Q++ G + S+ +T DG+L MWG NS GQ+GLG 
Sbjct: 118 QLGLGDTEERSTFHL-ISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGD 176

Query: 160 KAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           KA   +P    I   V C+S         G+  S  +T  G++ ++G   +G+LG     
Sbjct: 177 KAYVSVPHQVDIGKPVSCIS--------CGYYHSALITQDGELYTFGEPENGKLG----- 223

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             L   +  +   P+L+  + G KV   A G  H+  + E G VY FG       L Q G
Sbjct: 224 --LSPKQLKNHKLPQLVSGISG-KVSKVACGGGHTVVLAE-GDVYTFG-------LGQYG 272

Query: 276 N--------HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                        P  +  L   +   + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 273 QLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGLG 330



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 146/307 (47%), Gaps = 28/307 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           ++CG  HT  +TE G +Y  G N++GQLG       + +P  +  LK E V+++  G +H
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVN-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G NS GQLGLG    +    +I   TK   +     KQ A G   S 
Sbjct: 99  TLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKI-----KQLAAGSYTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G+++ WG    G++G G ++ +           P  +    G  V   + G+ HS
Sbjct: 154 VLTEDGQLVMWGDNSEGQIGLGDKAYV---------SVPHQVDI--GKPVSCISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTSG 306
           A I ++G +Y FG+    K+     Q  NH + P L+S +     +V CGG HT VL  G
Sbjct: 203 ALITQDGELYTFGEPENGKLGLSPKQLKNH-KLPQLVSGISGKVSKVACGGGHTVVLAEG 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
            ++YT+G  + G LG G+     S  +      +  +  ++CG  HTA I+E  ++    
Sbjct: 262 -DVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYTFG 320

Query: 367 GGSHGTF 373
            G HG  
Sbjct: 321 DGRHGKL 327



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F +  + ++ACGG H L  
Sbjct: 319 FGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCHMLVF 364


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 52/364 (14%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GY 132
           ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I       V+++  G 
Sbjct: 299 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGV-CSYVPHPKLIDEFNGSTVELADCGE 357

Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI+ K  + G   + 
Sbjct: 358 FHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIYVKAISCGPWHTA 416

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            VT  GK+ ++G G  G LGHG            S   PR ++ L G +   AA G  HS
Sbjct: 417 FVTSEGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGCRTIKAACGVWHS 467

Query: 251 ACIDENGRVYIFGDRAVDKMLFQ--EGNHARR----------PSLISKLPYS--EEVVCG 296
           A +     V +FG+      LF   +G+  R           PS +++L  +  ++V CG
Sbjct: 468 AAV-----VSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACG 522

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  L+  G++Y  G+ +       S D++ +P  ++G   +S V +V+CG+ H A +
Sbjct: 523 QSITVALSMSGQVYAMGTAD------PSHDIVRAPSCIEGGLGKSFVQEVACGFHHIAVL 576

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S+ ++ TWG G            S GQLGHG+      PT+V   +  +  +V CG N+
Sbjct: 577 NSKAEVYTWGKG------------SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNY 624

Query: 416 TGAL 419
           T  +
Sbjct: 625 TATI 628



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/337 (32%), Positives = 154/337 (45%), Gaps = 37/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F   +++   CG  HT  +T +G +YA G  D   
Sbjct: 320 WGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNA 379

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T +G+L+ +G  + G LG G
Sbjct: 380 GLLGLGSGASH-WKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG 438

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T +AA G   S AV       T  GK+ +WG G  GRLGH
Sbjct: 439 DRIS--TNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGH 496

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G     L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 497 GDIECRL---------IPSCVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSHDI 547

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +        R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 548 V--------RAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 599

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
               P  V+       V +V CG  +TA I   K +T
Sbjct: 600 YRCMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 635



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 35/266 (13%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 286 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPH------- 338

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
             P+LI E  G  V++A  G  H+  +  +G +Y +GD   +  L   G   +H +   +
Sbjct: 339 --PKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 396

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           + ++   Y + + CG +HT  +TS G+L+T+G    G LG G     + P  V+   +  
Sbjct: 397 LGQMEGIYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 455

Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
              + +CG  H+AA+        S GK+ TWG G              G+LGHG+    +
Sbjct: 456 RTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDG------------DDGRLGHGDIECRL 503

Query: 394 HPTIVNFGENVKALQVSCGFNHTGAL 419
            P+ V   +     QV+CG + T AL
Sbjct: 504 IPSCVTELDTTSFQQVACGQSITVAL 529



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 18/229 (7%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 255 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 314

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 315 GQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFHTCAVTASGDLYAWGD 374

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
            ++  G LG+GS      P R+ G      V  +SCG  HTA + SEGK+ T+G     G
Sbjct: 375 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG----DG 430

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           TF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 431 TF--------GALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVV 471


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 174/369 (47%), Gaps = 32/369 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G+ +S+  PV        ++ A+ CGG H++ L   G V+A G N  G+
Sbjct: 179 WGLNEDGQLGDGTNDSQTTPVAVQINALTTITAVDCGGDHSMALDSLGRVWAWGYNGDGE 238

Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           L  G +EN      P+ +  L  +++ IS G  +S A++ DG +  WG NS+GQLG G  
Sbjct: 239 LGGGTTENNSNVPVPVPVPNL-TDIIAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNT 297

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                 +PTK+  L     K  + G   S+AVT  G V +WG    G++G+G++S+    
Sbjct: 298 DQNS--VPTKISSLP--LMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPV 353

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           L       P  ++ L  +    A A F  +  ID  GRV+ +G     ++      ++  
Sbjct: 354 LN------PVQVQGLTDIDAVCAGATFSLALGID--GRVWAWGLNDEGQLGDGTNTNSTT 405

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  ++ L     V CG  H+  + + G++ +WG N+ G LG GS     +P  V G    
Sbjct: 406 PVEVTNLAKISAVACGSDHSLAIRN-GKVKSWGLNDEGQLGDGSTRSSSAPLDVTG---L 461

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
           S +  V+ G  H+ AI S+G I  WG  G             GQLG G +     P  ++
Sbjct: 462 SDIVYVAAGESHSLAITSKGNIYVWGLNGD------------GQLGDGTNRSSRTPKTID 509

Query: 400 FGENVKALQ 408
               V A++
Sbjct: 510 LNLGVTAVE 518



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 40/328 (12%)

Query: 104 GISENIGYSLEPLRISGLKKE--------VVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G     G+S  P R +G + +          QIS G+ HS A+  +G+L+ WG N +GQL
Sbjct: 129 GTQPQPGFSPRP-RPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQL 187

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   ++  P+  ++  L+ I       G + S+A+   G+V +WG  G G LG G   
Sbjct: 188 GDGTNDSQTTPVAVQINALTTITA--VDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTE 245

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           +               I       + I+A G  +S  +  +G V  +G  +  ++     
Sbjct: 246 NNSNVPVPVPVPNLTDI-------IAISAGGE-YSIALSSDGSVLTWGANSDGQLGNGNT 297

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG---SIDVLHSPE 332
           +    P+ IS LP  + +  G  H+  +T  G +Y WG N+ G +G G   + + + +P 
Sbjct: 298 DQNSVPTKISSLPLMKGISAGEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPV 357

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +VQG    + +D V  G   + A+  +G++  W W          G +  GQLG G + +
Sbjct: 358 QVQG---LTDIDAVCAGATFSLALGIDGRV--WAW----------GLNDEGQLGDGTNTN 402

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
              P  V     + A  V+CG +H+ A+
Sbjct: 403 STTPVEVTNLAKISA--VACGSDHSLAI 428



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 139/302 (46%), Gaps = 36/302 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHH 134
           ++ G +H+L L   G ++A GLN+ GQLG   N   +    ++I+ L   +  +  G  H
Sbjct: 160 ISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT-ITAVDCGGDH 218

Query: 135 SSAITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           S A+   G ++ WG N +G+LG G  +    +P+P  V  L+ I    A  G E S+A++
Sbjct: 219 SMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISA--GGEYSIALS 276

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G VL+WGA   G+LG+G          +     P  I  L    +K  +AG  HS  +
Sbjct: 277 SDGSVLTWGANSDGQLGNG---------NTDQNSVPTKISSLP--LMKGISAGEAHSLAV 325

Query: 254 DENGRVYIFGDRAVDKMLFQEG----------NHARRPSLISKLPYSEEVVCGGYHTCVL 303
            E+G VY +G       L  EG          N    P  +  L   + V  G   +  L
Sbjct: 326 TEDGFVYAWG-------LNDEGQIGNGEKSADNPVLNPVQVQGLTDIDAVCAGATFSLAL 378

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
              G ++ WG N+ G LG G+     +P  V    + + +  V+CG  H+ AI  GK+ +
Sbjct: 379 GIDGRVWAWGLNDEGQLGDGTNTNSTTPVEV---TNLAKISAVACGSDHSLAIRNGKVKS 435

Query: 364 WG 365
           WG
Sbjct: 436 WG 437


>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
 gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
          Length = 897

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 147/317 (46%), Gaps = 26/317 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+LGLG ++     +         H++K ++CG  HT+ L + G +Y+ G ND+
Sbjct: 4   WGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGSNDY 63

Query: 101 GQLGISENIGY-----SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GQ G   N        + E +RI+ +       S G +H+ AI     +Y WG NS+GQL
Sbjct: 64  GQTGRQRNNKRFARIDAFESMRITNVS------SNGANHNLAINDKNCIYAWGDNSDGQL 117

Query: 156 GLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           G+  +  K     P +++ LS     Q A G   S+AV   G V SWG+   G+LG    
Sbjct: 118 GVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS- 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                   + S   P+ I +L G  +   AAG  HS  I  +G +  +G  +  ++    
Sbjct: 177 --------NVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGT 228

Query: 275 GNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +    P+ +S L   +     CG  HT VLT  G ++T+G+  +G LG  S+    SP+
Sbjct: 229 NDGVLSPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHCSPQ 288

Query: 333 RVQGPFSESPVDQVSCG 349
            V        V Q++CG
Sbjct: 289 MVVDLMG-IVVTQITCG 304



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 19/262 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQ 102
           G+ DYG+ G      R+  +   AFE   +  ++  GA H L + +  C+YA G N  GQ
Sbjct: 59  GSNDYGQTGRQRNNKRFARI--DAFESMRITNVSSNGANHNLAINDKNCIYAWGDNSDGQ 116

Query: 103 LGISE-NIG-YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+++ N+  +   P +I  L K  VVQ++ G  HS A+  DG ++ WG N  GQLG+  
Sbjct: 117 LGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDS 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             + V   P ++  LSG +  Q A G   S+A+T  G +L+WG    G+LG G    +L 
Sbjct: 177 NVSSV--EPKQILKLSGFYIVQIAAGGAHSLAITNSGALLTWGKNSFGQLGLGTNDGVL- 233

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   +P  +  L    +  AA G  H+A + + G V+ FG  +  ++     +H  
Sbjct: 234 --------SPTCVSSLRSQHIAYAACGEDHTAVLTKEGGVFTFGAGSSGQLGHNSLSHHC 285

Query: 280 RPSLISKLP--YSEEVVCGGYH 299
            P ++  L      ++ CG ++
Sbjct: 286 SPQMVVDLMGIVVTQITCGRFY 307



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 131/289 (45%), Gaps = 27/289 (9%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGF 186
           IS G +H+  +  DG++Y  G N  GQ G  +   +      +++    +  T  ++ G 
Sbjct: 39  ISCGLNHTILLLQDGQIYSCGSNDYGQTGRQRNNKRF----ARIDAFESMRITNVSSNGA 94

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             ++A+     + +WG    G+LG   + ++  F R     TPR IK L    V   A G
Sbjct: 95  NHNLAINDKNCIYAWGDNSDGQLG-VTDQNLKQFYR-----TPRQIKSLSKFAVVQVACG 148

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
             HS  +  +G V+ +G     ++       +  P  I KL   Y  ++  GG H+  +T
Sbjct: 149 QSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGFYIVQIAAGGAHSLAIT 208

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 363
           + G L TWG N  G LG+G+ D + SP  V    S+  +   +CG  HTA ++ EG + T
Sbjct: 209 NSGALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQH-IAYAACGEDHTAVLTKEGGVFT 267

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           +G G            S GQLGH +   +  P +V     +   Q++CG
Sbjct: 268 FGAG------------SSGQLGHNSLSHHCSPQMVVDLMGIVVTQITCG 304



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 127/284 (44%), Gaps = 33/284 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WGK   GQLGLG      I   T V+  +    K  + G   ++ +   G++ S G+
Sbjct: 1   MFAWGKAIEGQLGLGGIDENCILKATHVDLTTNHTIKLISCGLNHTILLLQDGQIYSCGS 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIAAAGFLHSACIDENGRVYIF 262
              G+ G  + +    F R         I   E +++  +++ G  H+  I++   +Y +
Sbjct: 61  NDYGQTGRQRNNK--RFAR---------IDAFESMRITNVSSNGANHNLAINDKNCIYAW 109

Query: 263 GDRA------VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           GD +       D+ L Q     R+   +SK     +V CG  H+  + + G +++WGSN 
Sbjct: 110 GDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVV-QVACGQSHSLAVINDGTVFSWGSNR 168

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
            G LGI S      P+++    S   + Q++ G  H+ AI+  G +LTW           
Sbjct: 169 YGQLGIDSNVSSVEPKQIL-KLSGFYIVQIAAGGAHSLAITNSGALLTW----------- 216

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G +S GQLG G +   + PT V+   +      +CG +HT  L
Sbjct: 217 -GKNSFGQLGLGTNDGVLSPTCVSSLRSQHIAYAACGEDHTAVL 259


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 38/310 (12%)

Query: 121 LKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
            K +V V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     
Sbjct: 32  FKNDVPVHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKV 89

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKE 234
           K AA G   ++  T GG V + G    G+LG G         ++ F   TSE+       
Sbjct: 90  KLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH------- 140

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
               K+K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + 
Sbjct: 141 ----KIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWIS 196

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKH 352
           CG YH+  +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +H
Sbjct: 197 CGYYHSAFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEH 254

Query: 353 TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
           T  ++E  + T+G G              GQLG G  + +   P ++    +     +SC
Sbjct: 255 TVVLTENAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISC 302

Query: 412 GFNHTGALLE 421
           G NHT  + +
Sbjct: 303 GENHTALITD 312



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQVTI--GKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
 gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
           infestans T30-4]
          Length = 611

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 110/212 (51%), Gaps = 16/212 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  DYG+LG+G       P     F +H + A+ACG  +T+     G V A G ND GQL
Sbjct: 197 GCNDYGQLGMGDHSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQL 256

Query: 104 GISENIGYSLEPLRISG-LKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G+       L P R++  L + VV Q+S GYHH++ +T DG +Y +G+N  GQLGLG K 
Sbjct: 257 GLDRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKL 316

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P  VE LS +   Q A G   ++A++  GKV  +     GR  HGQ    LG  
Sbjct: 317 HMARPTP--VESLSRMRITQVACGCYHTLALSDDGKVFPF-----GRNNHGQ----LGLE 365

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            S    +P+LI  L     K  AAGF HS C+
Sbjct: 366 TSMDCLSPQLISTLRN---KPVAAGFYHSVCL 394



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 171/401 (42%), Gaps = 63/401 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLND 99
           +G   YG L LG    R  P        +  K    +ACG   T  L E G V+  G ND
Sbjct: 35  FGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGYND 94

Query: 100 FGQ--LGISENIGYSLEPLRIS-GLKK-EVVQISTGY--HHSSAITVDGELYMWGKNSNG 153
            GQ  +G +E +      LR S GL     V++ +G    H +A+  +G LY  G N  G
Sbjct: 95  SGQCAIGTTERV----PSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRG 150

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGLG   A  +   T VE L+G      A  +  +  V   G + + G    G+LG G 
Sbjct: 151 QLGLG--TATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGD 208

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------D 264
            S  L          PR +       V   A G  ++     +G V  FG         D
Sbjct: 209 HSGHL---------VPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLD 259

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCL 320
           R  + +L         P+ ++  P    VV    CG +HT ++T  G +YT+G N+ G L
Sbjct: 260 RVSEPVLL--------PTRLAP-PLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQL 310

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHS 379
           G+G    +  P  V+   S   + QV+CG  HT A+S +GK+  +            G +
Sbjct: 311 GLGHKLHMARPTPVES-LSRMRITQVACGCYHTLALSDDGKVFPF------------GRN 357

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + GQLG    +D + P +++    ++   V+ GF H+  L+
Sbjct: 358 NHGQLGLETSMDCLSPQLIS---TLRNKPVAAGFYHSVCLV 395



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 36/339 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMW 147
           +++ G N +G+L + +    S  P R+        K VV ++ G   ++ +  +G+++  
Sbjct: 32  LFSFGQNTYGELALGDTNDRS-TPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTC 90

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ--AALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ  +G    + +P       LS   T +  +  G E   A+   G + + G   
Sbjct: 91  GYNDSGQCAIG--TTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNM 148

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-- 263
            G+LG G  +++       +E T  L++EL G +V   A  + H+A + +NG ++  G  
Sbjct: 149 RGQLGLGTATTV-------TEAT--LVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199

Query: 264 DRAVDKMLFQEGNHARRP-SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           D     M    G+   RP     + P    V CG ++T      G +  +G N++G LG+
Sbjct: 200 DYGQLGMGDHSGHLVPRPVDYFFRHPVLA-VACGQHYTVASLRDGGVVAFGKNDHGQLGL 258

Query: 323 GSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
             + + +  P R+  P   + V Q+SCG+ HTA ++E G + T+G             + 
Sbjct: 259 DRVSEPVLLPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFG------------RND 306

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQLG G+ +    PT V     ++  QV+CG  HT AL
Sbjct: 307 YGQLGLGHKLHMARPTPVESLSRMRITQVACGCYHTLAL 345



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 121/290 (41%), Gaps = 38/290 (13%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVTGGGKVLS 200
           L+ +G+N+ G+L LG    +    PT+V+      TK     A G EQ+  +   G V +
Sbjct: 32  LFSFGQNTYGELALGDTNDR--STPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFT 89

Query: 201 WGAGGSGRLGHGQESSILGFLRS---TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
            G   SG+   G    +     S   +S +T RL           +  G  H A +  NG
Sbjct: 90  CGYNDSGQCAIGTTERVPSLRFSPGLSSHHTVRLF----------SGNGSEHLAALCANG 139

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +Y  G     ++           +L+ +L      +V C  +HT ++   G+L+  G N
Sbjct: 140 FLYTVGFNMRGQLGLGTATTVTEATLVEELAGKRVVDVACSYFHTAIVMDNGDLHACGCN 199

Query: 316 ENGCLGIGSIDVLHSPERVQGP---FSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHG 371
           + G LG+G     HS   V  P   F   PV  V+CG  +T A++ +G ++ +G    HG
Sbjct: 200 DYGQLGMGD----HSGHLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKN-DHG 254

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               D  S    L        + P +    +     Q+SCG++HT  + E
Sbjct: 255 QLGLDRVSEPVLLP-----TRLAPPL----DRAVVPQLSCGYHHTAIVTE 295


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 174/367 (47%), Gaps = 47/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACGG H   +T+ G V++ G    G+LG  +  ++   L P  I  L    ++ ++
Sbjct: 311 VQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDV---LHPKLIEALSNTNIELVA 367

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGF 186
            G +HS A+T+ G+LY WG  +   G LG G + +  +P   +V   L GI     + G 
Sbjct: 368 CGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVP--KRVNGPLEGIHVSYISCGP 425

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             +  VT  G++ ++G G  G LGHG   S+           PR ++ L+G++   AA G
Sbjct: 426 WHTAVVTSAGQLFTFGDGTFGALGHGDRKSV---------SLPREVESLKGLRTVRAACG 476

Query: 247 FLHSACIDEN--GRVYIFGDRAVDKMLFQEGNHARR----------PSLISKLPYSE-EV 293
             H+A + E   G        +VD   + +G+  R           P+ ++   ++  +V
Sbjct: 477 VWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHNVCQV 536

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ G +YT GS   G LG    D    P  V+G  SES V++++CG  H 
Sbjct: 537 ACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADG-KLPILVEGKLSESFVEEIACGAYHV 595

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG
Sbjct: 596 AVLTSRTEVYTWGKGAN------------GRLGHGDTDDRNTPTLVEALKDKDVKSIACG 643

Query: 413 FNHTGAL 419
              T A+
Sbjct: 644 TTFTAAI 650



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 156/341 (45%), Gaps = 50/341 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    +++ +ACG  H+  +T +G +Y    G  ++
Sbjct: 333 WGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSCAVTLSGDLYTWGNGTYNY 392

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R++G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 393 GLLGHGNQVSHWV-PKRVNGPLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHG 451

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K + +P +VE L G+ T +AA G   + AV                 + +WG G  
Sbjct: 452 DR--KSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDK 509

Query: 207 GRLGH-GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           GRLGH  +E+ ++    + +E+            V   A G   +  +  +GRVY  G  
Sbjct: 510 GRLGHVDKEAKLVPTCVALAEHN-----------VCQVACGHSLTVALTTSGRVYTMGS- 557

Query: 266 AVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
               +  Q GN    P    KLP          + EE+ CG YH  VLTS  E+YTWG  
Sbjct: 558 ---PVYGQLGN----PQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKG 610

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            NG LG G  D  ++P  V+    +  V  ++CG   TAAI
Sbjct: 611 ANGRLGHGDTDDRNTPTLVEA-LKDKDVKSIACGTTFTAAI 650



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 135/306 (44%), Gaps = 53/306 (17%)

Query: 142 GELYMWGKNS--------NGQLG--LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           G++++WG+ +        N ++G  LG K   + P    +E    +  +  A G   +  
Sbjct: 266 GDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFP--KALESAVVLDVQNIACGGRHAAL 323

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G+V SWG    GRLGHG +S +L          P+LI+ L    +++ A G  HS 
Sbjct: 324 VTKQGEVFSWGEESGGRLGHGVDSDVL---------HPKLIEALSNTNIELVACGEYHSC 374

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS---KLPYSEEVVCGGYHTCVLTSG 306
            +  +G +Y +G+   +  L   GN      P  ++   +  +   + CG +HT V+TS 
Sbjct: 375 AVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 434

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI----- 361
           G+L+T+G    G LG G    +  P  V+       V + +CG  HTAA+ E  +     
Sbjct: 435 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTV-RAACGVWHTAAVVEVMVGNSSS 493

Query: 362 --------LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
                    TWG G              G+LGH +    + PT V   E+    QV+CG 
Sbjct: 494 SNCSSVDLFTWGDGDK------------GRLGHVDKEAKLVPTCVALAEH-NVCQVACGH 540

Query: 414 NHTGAL 419
           + T AL
Sbjct: 541 SLTVAL 546



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++     +    P LI  L 
Sbjct: 300 PKALESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALS 359

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  E V CG YH+C +T  G+LYTWG+     G LG G+      P+RV GP     V 
Sbjct: 360 NTNIELVACGEYHSCAVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVS 419

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +SCG  HTA + S G++ T+G     GTF        G LGHG+      P  V   + 
Sbjct: 420 YISCGPWHTAVVTSAGQLFTFG----DGTF--------GALGHGDRKSVSLPREVESLKG 467

Query: 404 VKALQVSCGFNHTGALLEYV 423
           ++ ++ +CG  HT A++E +
Sbjct: 468 LRTVRAACGVWHTAAVVEVM 487


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 135/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 47  GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQL 106

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 107 GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 219

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 220 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 279

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 280 LIEGIGGRVSQIECASYHTIAYVYTTG 306



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 147/305 (48%), Gaps = 22/305 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     VY+ G N +GQLG   +   +  P  I  L    V  +S G  HS
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQS-TERPEPIQALNDLHVDLVSCGKEHS 86

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G+++ WG  S GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  
Sbjct: 87  VAVCHKGKVFAWGAGSEGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSED 145

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V SWG    G+LG G+ S         S+  P+ +K LEG+ +   AAG  HS  +  
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSL 197

Query: 256 NGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
            G  + +G     ++    GN  +    +P  I  L     +   CG  HT VLT  G++
Sbjct: 198 TGTSFGWGSNRSGQLALS-GNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQV 256

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWG 367
           +T+G N +G L          P+ ++G      V Q+ C   HT A   + G++++ G G
Sbjct: 257 FTFGGNSSGQLQPSPRSGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRG 314

Query: 368 GSHGT 372
            SH +
Sbjct: 315 PSHTS 319



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 35/304 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G HHS  +  +  +Y  G NS GQLG  +  +   P P  ++ L+ +     +
Sbjct: 23  ELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEP--IQALNDLHVDLVS 80

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E SVAV   GKV +WGAG  G+LG G+   I         + P  IK L G+K+   
Sbjct: 81  CGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEI--------SFMPTKIKALAGIKIIQV 132

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGY 298
           + G  HS  + E+G V+ +G  +  ++    G ++R  ++  K+   E     +V  GG 
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGL--GKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDV---LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           H+  L+  G  + WGSN +G L +    V   ++ P  + G      V  +SCG++HTA 
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLSVIYISCGYEHTAV 249

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++ EG++ T+G G S G       S  GQ G         P ++  G   +  Q+ C   
Sbjct: 250 LTEEGQVFTFG-GNSSGQLQPSPRS--GQRG---------PQLIE-GIGGRVSQIECASY 296

Query: 415 HTGA 418
           HT A
Sbjct: 297 HTIA 300



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 98  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 157

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 158 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 218 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 277

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 278 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 312



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 115/256 (44%), Gaps = 32/256 (12%)

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           SGI   QAA G   S+ +    +V S G    G+LG           R  S   P  I+ 
Sbjct: 20  SGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQR---------RDQSTERPEPIQA 70

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE 291
           L  + V + + G  HS  +   G+V+ +G  +  ++    F+E +    P+ I  L   +
Sbjct: 71  LNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFM--PTKIKALAGIK 128

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSC 348
             +V CG YH+  L+  G +++WG N  G LG+G      + P++V+      P+ QV+ 
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKS-LEGIPLAQVAA 187

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV--DYIHPTIVNFGENVK 405
           G  H+ A+S     ++GWG +            GQL   GN V      P  +   +N+ 
Sbjct: 188 GGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKEQIYKPHSIGALKNLS 236

Query: 406 ALQVSCGFNHTGALLE 421
            + +SCG+ HT  L E
Sbjct: 237 VIYISCGYEHTAVLTE 252



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 19/197 (9%)

Query: 229 PRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           PR +K    G+++  AA+G  HS  +  N RVY  GD +  ++  +      RP  I  L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVD 344
              + + V CG  H+  +   G+++ WG+   G LGIG   ++   P +++   +   + 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKA-LAGIKII 130

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIVNFGE 402
           QVSCG  H+ A+SE G + +W            G +S GQLG G N      P  V   E
Sbjct: 131 QVSCGHYHSLALSEDGHVFSW------------GRNSEGQLGLGKNSRSQAIPQKVKSLE 178

Query: 403 NVKALQVSCGFNHTGAL 419
            +   QV+ G  H+ AL
Sbjct: 179 GIPLAQVAAGGTHSFAL 195


>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
 gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
          Length = 451

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 153/306 (50%), Gaps = 26/306 (8%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPL--RISGLKKE 124
           ++  +  ++CG AH+L LT++  V++ G N FGQ G  I E+  YS   +  +I G    
Sbjct: 159 QETRVPQVSCGRAHSLVLTDSEGVFSMGSNTFGQCGRKIVEDEVYSGSHVVHKIEGFDSR 218

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V+Q++ G  HS  +T  G ++  G  ++GQ GLG       P+P   + L+G+  +Q A 
Sbjct: 219 VIQVACGQDHSLFLTDRGSVFACGWGADGQTGLGHHNKASCPVPVGGD-LAGVTVQQVAT 277

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KVKIA 243
             + S+AV+  G+V  WG     +L    ES+ +         +PRL+  L+GV +++ A
Sbjct: 278 YGDCSLAVSTDGQVFGWGNSEYLQLASVTESTQIS--------SPRLL-PLKGVGRIRQA 328

Query: 244 AAGFLHSACIDENGRVYI--FGDRAVDKMLFQEGNHARRPSLI---SKLPYSEEVV---C 295
           A G    A ++E+G V++  FG       L +     R P+     S+   + +V    C
Sbjct: 329 ACGGTQVAVLNEDGDVFVWGFGILGKGPKLSESAIPERVPATFFGRSEFNPTVKVASIRC 388

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H   +T GGEL+ WG N  GCLGIG  D  + P RV  P     V  V+CG  H  A
Sbjct: 389 GLSHFAAVTDGGELFVWGKNVRGCLGIGKHDDQYFPWRVTVP---GHVTDVACGVDHMVA 445

Query: 356 ISEGKI 361
           + +  I
Sbjct: 446 LVKSLI 451


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 163/348 (46%), Gaps = 37/348 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           L+CG  H+  +T  G +Y  G ND+GQLG      Y+ +P  +  LK E V  ++ G +H
Sbjct: 40  LSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYT-KPSVVKKLKPEKVYMVACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + A T  G LY +G   +GQLG G   A+   +P  +E L     K  A G + S A+T 
Sbjct: 99  TIAATESGHLYSFGCGGDGQLGHGD--AEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ +WG+ G G+ G G+++ I            RL   L G KV++ + G+ H A + 
Sbjct: 157 NGELYTWGSCGEGQNGLGEDTEI----------PTRL--HLHG-KVRMVSCGYYHMAVVT 203

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELY 310
           E+G +Y+ G++   K+           S + K+   E+ V    CG   T V+T  G +Y
Sbjct: 204 EDGSLYMCGEKEGGKLGLDH-EQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVY 262

Query: 311 TWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
           T+G    G LG+G S+     PER+   F +     VSCG   TA I++           
Sbjct: 263 TFGQGNQGQLGLGSSMMETEFPERIP-LFEKVKARTVSCGESFTAVITK----------- 310

Query: 370 HGTFSEDGHSSGGQLGHGNDV--DYIHPTIVNFGENVKALQVSCGFNH 415
           HG     G    G+LG G++   +   P  V    N     V+CG  H
Sbjct: 311 HGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCH 358



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 151/317 (47%), Gaps = 24/317 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D+G+LG G+ +S  +P V    +   +  +ACG  HT+  TE+G +Y+ G    GQ
Sbjct: 59  FGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQ 118

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +    S  P  I GL  ++   ++ G   S+AIT +GELY WG    GQ GLG+  
Sbjct: 119 LGHGDAED-SHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDT 177

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                IPT++     +  +  + G+     VT  G +   G    G+LG   E      L
Sbjct: 178 ----EIPTRLHLHGKV--RMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQ-----L 226

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNH 277
            +TS+   + IK +E  +V +AA G   +A + +NG VY FG     ++       E   
Sbjct: 227 DNTSQL--QKIKSIED-QVVVAACGAEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEF 283

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQ 335
             R  L  K+  +  V CG   T V+T  G LYT+G   +G LG+G         PE+V+
Sbjct: 284 PERIPLFEKVK-ARTVSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVK 342

Query: 336 GPFSESPVDQVSCGWKH 352
             F+   V  V+CG  H
Sbjct: 343 -RFNNFTVKMVTCGGCH 358



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 138/300 (46%), Gaps = 27/300 (9%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV +S G  HS+ +T +G+LY +G N  GQLG G    K    P+ V+ L        A 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGN--TKSYTKPSVVKKLKPEKVYMVAC 94

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++A T  G + S+G GG G+LGHG          +   + P++I+ L+  K K  A
Sbjct: 95  GRNHTIAATESGHLYSFGCGGDGQLGHGD---------AEDSHVPKIIEGLDVQKYKHLA 145

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
            G   SA I ENG +Y +G     +     G     P+ +        V CG YH  V+T
Sbjct: 146 CGSDFSAAITENGELYTWGSCGEGQNGL--GEDTEIPTRLHLHGKVRMVSCGYYHMAVVT 203

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
             G LY  G  E G LG+    + ++ +  +    E  V   +CG + TA +++ G + T
Sbjct: 204 EDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSVYT 263

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGND-VDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           +G G              GQLG G+  ++   P  +   E VKA  VSCG + T  + ++
Sbjct: 264 FGQGNQ------------GQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKH 311



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 13/83 (15%)

Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           +  V  +SCG +H+A ++  GK+ T+G             +  GQLGHGN   Y  P++V
Sbjct: 34  DDAVVNLSCGDEHSAVVTANGKLYTFGC------------NDWGQLGHGNTKSYTKPSVV 81

Query: 399 NFGENVKALQVSCGFNHTGALLE 421
              +  K   V+CG NHT A  E
Sbjct: 82  KKLKPEKVYMVACGRNHTIAATE 104


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 27/307 (8%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           L+  A G  H+L L   G +++ G N  GQLG   ++    +P RI  L+   V  +S G
Sbjct: 25  LRQAASGERHSLLLLSNGELHSYGDNSHGQLG-RRDVQRQEQPKRIPALETLRVDLVSCG 83

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+   ++  IP K++ L+ I   Q + G   S+A
Sbjct: 84  KEHSLAVCYKGRVFAWGAGSEGQLGIGE-FNEINLIPRKIKTLTDIKIIQVSCGHHHSLA 142

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G++ +WG+   G+LG G+E          S+ +P+ ++ L+G+ +   AAG  HS 
Sbjct: 143 LSEDGRLFTWGSNSHGQLGLGKECP--------SQASPQRVQFLDGIPLTQVAAGGAHSF 194

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCV 302
            +  +G  + +G  +  ++  ++ N    P + S  P S +         + CG  HT V
Sbjct: 195 ALSLSGASFGWGSNSEGQLALRKKN---VPVVQSSKPCSVDALENLGVVYISCGYEHTAV 251

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGK 360
           LT  G+++T+G N  G LG         P+ V+G   +  V Q+ CG  HT A   + GK
Sbjct: 252 LTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGK 309

Query: 361 ILTWGWG 367
           ++++G G
Sbjct: 310 VVSFGRG 316



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 10/268 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+  +G+LG   ++ + +P    A E   +  ++CG  H+L +   G V+A G    GQ
Sbjct: 47  YGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LGI E    +L P +I  L   +++Q+S G+HHS A++ DG L+ WG NS+GQLGLGK+ 
Sbjct: 107 LGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKEC 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P +V+ L GI   Q A G   S A++  G    WG+   G+L   +++  +  +
Sbjct: 167 PSQAS-PQRVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKN--VPVV 223

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           +S+    P  +  LE + V   + G+ H+A + + G+V+ FG  +  ++ +        P
Sbjct: 224 QSSK---PCSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGP 280

Query: 282 SLISKLP-YSEEVVCGGYHTC--VLTSG 306
            L+  +     ++ CG YHT   V T+G
Sbjct: 281 QLVEGIDGLVSQIDCGSYHTLAYVYTTG 308



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 22/276 (7%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E+ Q ++G  HS  +  +GEL+ +G NS+GQ  LG++  +    P ++  L  +     +
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSYGDNSHGQ--LGRRDVQRQEQPKRIPALETLRVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+ + I           PR IK L  +K+   
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEI--------NLIPRKIKTLTDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + E+GR++ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLT-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAI 356
           +  L+  G  + WGSN  G L +   ++ V+ S +       E+  V  +SCG++HTA +
Sbjct: 193 SFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVL 252

Query: 357 SE-GKILTWGWGGSHGT--FSEDGHSSGGQLGHGND 389
           ++ GK+ T+G G S+G   +S      G QL  G D
Sbjct: 253 TQTGKVFTFG-GNSYGQLGYSPTAGKEGPQLVEGID 287



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 29/250 (11%)

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +QAA G   S+ +   G++ S+G    G+LG               +  P+ I  LE ++
Sbjct: 26  RQAASGERHSLLLLSNGELHSYGDNSHGQLGRRD---------VQRQEQPKRIPALETLR 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSE--EVVCG 296
           V + + G  HS  +   GRV+ +G  +  ++   E N     P  I  L   +  +V CG
Sbjct: 77  VDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCG 136

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
            +H+  L+  G L+TWGSN +G LG+G       SP+RVQ      P+ QV+ G  H+ A
Sbjct: 137 HHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQF-LDGIPLTQVAAGGAHSFA 195

Query: 356 ISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDVDYIH---PTIVNFGENVKALQVSC 411
           +S     ++GWG +          S GQL     +V  +    P  V+  EN+  + +SC
Sbjct: 196 LSLSGA-SFGWGSN----------SEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISC 244

Query: 412 GFNHTGALLE 421
           G+ HT  L +
Sbjct: 245 GYEHTAVLTQ 254



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 16/187 (8%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G +++ AA+G  HS  +  NG ++ +GD +  ++  ++     +P  I  L     + V 
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG  H+  +   G ++ WG+   G LGIG  + ++   R     ++  + QVSCG  H+ 
Sbjct: 82  CGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHHHSL 141

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCG 412
           A+SE G++ TW            G +S GQLG G +      P  V F + +   QV+ G
Sbjct: 142 ALSEDGRLFTW------------GSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAG 189

Query: 413 FNHTGAL 419
             H+ AL
Sbjct: 190 GAHSFAL 196


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG   ++  P         +++ ++       HTL +T  G V++ G  D+
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDY 485

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   N      P  I G  L K VV +S GY HS+A+T DGELY WG+   G+LG  
Sbjct: 486 GKLG-HGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGDFGRLGHS 544

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSI 217
              ++   +PT V+ +SG+   Q A G   ++AV   G+++ S+G G +G+LGHG  + +
Sbjct: 545 DSHSRN--VPTLVKDISGV--GQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRV 600

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L G  ++   AG   S  +   G+V+ +G  +       E   
Sbjct: 601 ---------YRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETT- 650

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERV 334
           + RP LI +L  ++  ++ CG  H   L+   E++ WG+N  G  G G     +  P++V
Sbjct: 651 SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTPVTKPKKV 710

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q++ G  H    TA  ++ +++ W
Sbjct: 711 IG-LEGVSIQQITAGTSHSLAWTAVPTDRQLVAW 743



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 177/389 (45%), Gaps = 44/389 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  G+LE   +P +   F    +  +  G   T  ++  G V A G   +G
Sbjct: 374 VWGSNSSHQLAEGTLEKILQPKLAQGFSDAQM--IEAGQYCTFSVSADGAVKACGKGSYG 431

Query: 102 QLGISENIGYS------LEPLRISGLKKEVVQISTGYH-HSSAITVDGELYMWGKNSNGQ 154
           +LG+ ++   S      LEP R   ++K  V  S G   H+ A+T +GE++ WG    G+
Sbjct: 432 RLGLGDSNNQSMPKKLVLEPPRT--MRK--VSSSKGSDGHTLAVTAEGEVFSWGDGDYGK 487

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G  A +  P   +   L  +    +A G+  S AVT  G++ +WG G  GRLGH   
Sbjct: 488 LGHGNSATQKYPKIIQGPLLGKVVVCVSA-GYRHSAAVTNDGELYTWGEGDFGRLGHSD- 545

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
                   S S   P L+K++ GV     A G  H+  + ++GR V+ FG     K+   
Sbjct: 546 --------SHSRNVPTLVKDISGVGQ--VACGSSHTIAVAQDGRIVWSFGGGDNGKLGHG 595

Query: 274 EGNHARRPSLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           + N   RP +I  L  +    VC G  + + LTS G+++ WG     CLG GS +     
Sbjct: 596 DTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGC--GSCLGCGSSETTSLR 653

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN-D 389
            R+    S + +  +SCG  H  A+S E ++  W            G+++ GQ G G+  
Sbjct: 654 PRLIEELSITKIIDISCGDSHCLALSHENEVFAW------------GNNAMGQCGQGHTS 701

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P  V   E V   Q++ G +H+ A
Sbjct: 702 TPVTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 41/239 (17%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +  + P + SA + + +  L        H+L LTETG V++ G  D+
Sbjct: 3915 GEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDY 3974

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I GL+ +EVVQ++ G+ HS+ +T DG+L+ +G   +G+LG   
Sbjct: 3975 GKLG-HGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQRS 4033

Query: 160  KAAKVIP---------------------------IPTKVECLSGIFTKQAALGFEQSVAV 192
             + K+IP                            P  +  L G+F +  A+G E  +A+
Sbjct: 4034 TSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILAL 4093

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +  G V +WG     +LG G  + +           P L+  L+G  ++  +AG  HS+
Sbjct: 4094 SNTGDVYAWGCNCEAQLGLGHSNPV---------KEPILVTTLQGKNIRQISAGRCHSS 4143



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 157/338 (46%), Gaps = 33/338 (9%)

Query: 88  ETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           +T  VY  G N   QL  G  E I   L+P    G   +   I  G + + +++ DG + 
Sbjct: 368 DTVMVYVWGSNSSHQLAEGTLEKI---LQPKLAQGFS-DAQMIEAGQYCTFSVSADGAVK 423

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWGAG 204
             GK S G+LGLG    + +P    +E    +    ++ G +  ++AVT  G+V SWG G
Sbjct: 424 ACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDG 483

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             G+LGHG          S ++  P++I+  L G  V   +AG+ HSA +  +G +Y +G
Sbjct: 484 DYGKLGHGN---------SATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWG 534

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL-YTWGSNENGCLGI 322
           +    ++   + +    P+L+  +    +V CG  HT  +   G + +++G  +NG LG 
Sbjct: 535 EGDFGRLGHSDSHSRNVPTLVKDISGVGQVACGSSHTIAVAQDGRIVWSFGGGDNGKLGH 594

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSG 381
           G  + ++ P+ ++       + +V  G + + A+ S G++  WG G   G  S +  S  
Sbjct: 595 GDTNRVYRPKVIEA-LHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGCGSSETTS-- 651

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                      + P ++      K + +SCG +H  AL
Sbjct: 652 -----------LRPRLIEELSITKIIDISCGDSHCLAL 678



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 147/338 (43%), Gaps = 53/338 (15%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWGNG +G+L      S   P +  +  +   + + CG   T  +   G V A G   +G
Sbjct: 3864 LWGNGRHGQLADAG-TSASVPTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVGEGSYG 3920

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGY---HHSSAITVDGELYMWGKNSNGQLGL 157
            +LG   N      P  IS L+  VV Q+ T Y    HS A+T  GE++ WG    G+LG 
Sbjct: 3921 RLG-QGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLGH 3979

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G    +    P ++E L G    Q A GF+ S  VT  GK+ ++G+G SGRLG       
Sbjct: 3980 GNSERQR--RPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSGDSGRLGQ------ 4031

Query: 218  LGFLRSTS-EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV---DKMLFQ 273
                RSTS +  P  +  L+G                      +  G R +   D ML  
Sbjct: 4032 ----RSTSNKMIPERVTALDG----------------------HHIGQRLIGLPDAML-- 4063

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              NH  RP +I  L   + E++  G  H   L++ G++Y WG N    LG+G  + +  P
Sbjct: 4064 -KNH-NRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSNPVKEP 4121

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
              V        + Q+S G  H++A +   + T   G S
Sbjct: 4122 ILVTT-LQGKNIRQISAGRCHSSAWTTPALSTRASGCS 4158



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 129/317 (40%), Gaps = 74/317 (23%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            E+Y+WG   +GQL     +A V   PT    LS   T+Q   G   +  V   G VL+ G
Sbjct: 3861 EVYLWGNGRHGQLADAGTSASV---PTLAPSLSQ--TQQVVCGQNCTFLVQANGTVLAVG 3915

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF---LHSACIDENGRV 259
             G  GRLG G    +         YTP +I  L+G  V      +    HS  + E G V
Sbjct: 3916 EGSYGRLGQGNSDDL---------YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEV 3966

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNE 316
            + +GD    K+        RRP  I  L   EEVV   CG  H+ V+T+ G+L+T+GS +
Sbjct: 3967 FSWGDGDYGKLGHGNSERQRRPKQIEGL-QGEEVVQLACGFKHSAVVTADGKLFTFGSGD 4025

Query: 317  NGCLGIGSIDVLHSPERV--------------------------------QGPFSESPVD 344
            +G LG  S      PERV                                +G F    ++
Sbjct: 4026 SGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVF----IE 4081

Query: 345  QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--G 401
             ++ G +H  A+S  G +  WG                 QLG G+      P +V    G
Sbjct: 4082 DIAVGCEHILALSNTGDVYAWGCNCE------------AQLGLGHSNPVKEPILVTTLQG 4129

Query: 402  ENVKALQVSCGFNHTGA 418
            +N++  Q+S G  H+ A
Sbjct: 4130 KNIR--QISAGRCHSSA 4144



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 85/188 (45%), Gaps = 11/188 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V  A     ++ +  G   +L LT  G V+A G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLG 643

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G SE    SL P  I  L   +++ IS G  H  A++ + E++ WG N+ GQ G G  +
Sbjct: 644 CGSSETT--SLRPRLIEELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTS 701

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSV---AVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             V   P KV  L G+  +Q   G   S+   AV    ++++W       L    E S  
Sbjct: 702 TPVTK-PKKVIGLEGVSIQQITAGTSHSLAWTAVPTDRQLVAWHRPFCVDL----EESTF 756

Query: 219 GFLRSTSE 226
            +LRS  E
Sbjct: 757 TYLRSFLE 764



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 105/251 (41%), Gaps = 40/251 (15%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSA 251
            G  +V  WG G  G+L              TS   P L   L   +  +      FL   
Sbjct: 3858 GKSEVYLWGNGRHGQLADA----------GTSASVPTLAPSLSQTQQVVCGQNCTFL--- 3904

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY----HTCVLTSG 306
             +  NG V   G+ +  ++     +    P++IS L  Y    +   Y    H+  LT  
Sbjct: 3905 -VQANGTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTET 3963

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
            GE+++WG  + G LG G+ +    P++++G   E  V Q++CG+KH+A ++ +GK+ T+G
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEGLQGEE-VVQLACGFKHSAVVTADGKLFTFG 4022

Query: 366  WGGS--------------HGTFSEDGHSSGGQLGHGNDV---DYIHPTIVNFGENVKALQ 408
             G S                  + DGH  G +L    D    ++  P I+   E V    
Sbjct: 4023 SGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIED 4082

Query: 409  VSCGFNHTGAL 419
            ++ G  H  AL
Sbjct: 4083 IAVGCEHILAL 4093


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 157/336 (46%), Gaps = 22/336 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  +G+LGLG +E      P         ++K +ACG  HTLFLT +G VYA G ND 
Sbjct: 10  WGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I   L   VVQI+ G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDNDCGQLGQAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               ++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-QDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNTPKEV-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ V   A G  HS  I ++  V+ +G     ++   +     
Sbjct: 184 ----THSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNCGQLGLNDETSRS 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCL--GIGSIDVLHSPERVQ 335
            P+ +  L       V CG   +  LT+ G ++T G+   G L  G G+ ++L    R+ 
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEML---PRMV 296

Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGS 369
                S + QV+CG +HT A+  S G++  +G G S
Sbjct: 297 MELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSS 332



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 35/284 (12%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +T   ELY WG  S+GQLGLG    + I  P++V        KQ A G   ++ +T  G+
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V + G+    +LGH   +             P LI EL    V   A G  HS  + E G
Sbjct: 61  VYACGSNDHSQLGHDLPTK-----------RPLLIPELLDYVVVQIACGSRHSMALSEWG 109

Query: 258 RVYIFGD-------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           +V  +GD       +A D+ + Q     R+  L+SK     ++ CG  H+  LTS GELY
Sbjct: 110 QVLSWGDNDCGQLGQATDQDIVQLPKIVRQ--LVSKTVV--QIACGNNHSLALTSCGELY 165

Query: 311 TWGSNENGCLGIGSI-DVLHSPERVQ-GPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           +WGSN  G LG+ +  +V HS + V+       PV  ++CG  H+  IS+   + +GW  
Sbjct: 166 SWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAV-FGW-- 222

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                   G ++ GQLG  ++    +PT +     +    V+CG
Sbjct: 223 --------GRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACG 258



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS +   P S  ++V CG  HT  LTS G +Y  GSN++  LG  + +   L 
Sbjct: 24  EDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE +     +  V Q++CG +H+ A+SE G++L+WG             +  GQLG   
Sbjct: 84  IPELL-----DYVVVQIACGSRHSMALSEWGQVLSWG------------DNDCGQLGQAT 126

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D D +  P IV    +   +Q++CG NH+ AL
Sbjct: 127 DQDIVQLPKIVRQLVSKTVVQIACGNNHSLAL 158



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 3/130 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LGL    SR  P          ++ +ACG   ++FLT  G V+  G   +GQ
Sbjct: 222 WGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKA 161
           LG        L  + +  +   + Q++ G  H+ A+    G +Y +G  S+GQ  LG ++
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQ--LGTRS 339

Query: 162 AKVIPIPTKV 171
            K + +P  V
Sbjct: 340 TKSLTLPQVV 349



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 361
           +T+G ELY WG+  +G LG+G I+        Q P++ +S + QV+CG +HT  ++    
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLT---- 56

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  S G     G +   QLGH  D+    P ++    +   +Q++CG  H+ AL E
Sbjct: 57  -------SSGRVYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHSMALSE 107

Query: 422 Y 422
           +
Sbjct: 108 W 108


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 134/267 (50%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  +G+LG    +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 4   GDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQL 63

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ DG ++ WG+NS GQLGLGK  +
Sbjct: 64  GIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKN-S 122

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +   IP KV+ L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 123 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQL------ALSGNKV 176

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H+A + E G+V+ FG  +  ++     +  R P 
Sbjct: 177 KEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQ 236

Query: 283 LISKL-PYSEEVVCGGYHTC--VLTSG 306
           LI  +     ++ C  YHT   V T+G
Sbjct: 237 LIEGIGGRVSQIECASYHTIAYVYTTG 263



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 138/287 (48%), Gaps = 22/287 (7%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNS 151
           Y+ G N +GQLG   +      P  I  L    V  +S G  HS A+   G+++ WG  S
Sbjct: 1   YSCGDNSWGQLGQRRDQSTE-RPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGS 59

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG+G+   ++  +PTK++ L+GI   Q + G   S+A++  G V SWG    G+LG 
Sbjct: 60  EGQLGIGE-FKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G+ S         S+  P+ +K LEG+ +   AAG  HS  +   G  + +G     ++ 
Sbjct: 119 GKNSR--------SQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLA 170

Query: 272 FQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              GN  +    +P  I  L     +   CG  HT VLT  G+++T+G N +G L     
Sbjct: 171 L-SGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 229

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTWGWGGSH 370
                P+ ++G      V Q+ C   HT A   + G++++ G G SH
Sbjct: 230 SGQRGPQLIEGIGGR--VSQIECASYHTIAYVYTTGQVVSLGRGPSH 274



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 12/224 (5%)

Query: 43  WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G   E  + P    A     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 55  WGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEG 114

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+ +N      P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 115 QLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGN 174

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + I  P  +  L  +     + G+E +  +T  G+V ++G   SG+L     S   G
Sbjct: 175 KVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRG 234

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                    P+LI+ + G   +I  A +   A +   G+V   G
Sbjct: 235 ---------PQLIEGIGGRVSQIECASYHTIAYVYTTGQVVSLG 269



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 19/211 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           LG  R  S   P  I+ L  + V + + G  HS  +   G+V+ +G  +  ++   E   
Sbjct: 11  LGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKE 70

Query: 278 -ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PER 333
            +  P+ I  L   +  +V CG YH+  L+  G +++WG N  G LG+G      + P++
Sbjct: 71  ISFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQK 130

Query: 334 VQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLG-HGNDV-- 390
           V+      P+ QV+ G  H+ A+S     ++GWG +            GQL   GN V  
Sbjct: 131 VKS-LEGIPLAQVAAGGTHSFALSLTGT-SFGWGSNR----------SGQLALSGNKVKE 178

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               P  +   +N+  + +SCG+ HT  L E
Sbjct: 179 QIYKPHSIGALKNLSVIYISCGYEHTAVLTE 209


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 176/384 (45%), Gaps = 36/384 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG           +C A    +L+ +   GG  TLF LT  G VYATG    
Sbjct: 3624 WGHNHRGQLGGVEGAKVKTATICDALT--ALRPVQIVGGEQTLFALTSDGKVYATGYGAG 3681

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  I  L+  +V    +++G  H  A+T  G+++ WG+  +G+LG 
Sbjct: 3682 GRLGIGGTESVS-TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGH 3740

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G KA  +   P  +E L        A G   S  +T  G++ +WG G  GRLGHG     
Sbjct: 3741 GSKA--LCERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGD---- 3794

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+ ++EL G  V   A  +G   + C+  +G V+ +GD    K+     
Sbjct: 3795 -----SEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGS 3849

Query: 276  NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L  +   +V CG   +  LT+ G +YTWG  +   LG GS D +  P+ 
Sbjct: 3850 DGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQA 3909

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V QV+ G  H  A ++ G++ TW            G +  GQLG G+    
Sbjct: 3910 VQGALQGKRVIQVAVGSLHCVACTDSGEVFTW------------GDNDEGQLGDGSTNAI 3957

Query: 393  IHPTIVNFGENVKALQVSCGFNHT 416
              P +V   +  K  +V+CG  HT
Sbjct: 3958 QRPKLVASLKGKKMNRVACGSAHT 3981



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/321 (31%), Positives = 149/321 (46%), Gaps = 22/321 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFG 101
            G G  GRLGLG   +  +P   +    + +K +A   GG H L LT  G V++ G  + G
Sbjct: 2710 GEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDG 2769

Query: 102  QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +LG    I Y   P  +  LK K +  ++ G  HS+A+T  GELY WG    G+LG G  
Sbjct: 2770 KLGHGNKISYD-RPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN 2828

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++   P +V  LS     Q A G    Q++A+T    V SWG G  G+LG G      
Sbjct: 2829 VPQL--KPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG----- 2881

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P+ ++ L   +V     G   S  + +NG+V+ +G     ++     +H 
Sbjct: 2882 ----SDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV 2937

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            R P ++ +L      +V  G  H   +T  GE+Y WG N++G  G G+  V   P  V+G
Sbjct: 2938 RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRG 2997

Query: 337  PFSESPVDQVSCGWKHTAAIS 357
                  +  V+CG  H+ A S
Sbjct: 2998 ---LEAITNVACGSSHSVAWS 3015



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 135/272 (49%), Gaps = 23/272 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  S  RP +  + +   ++ +ACG +H+  +T +G +Y  G  ++G+
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGR 2822

Query: 103  LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N+   L+P ++  L  E VVQ++ G   +   A+T    +Y WG    G+LG G 
Sbjct: 2823 LGHGDNVP-QLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGG 2881

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                   +P  VE L+     Q   G + S+A++  GKV +WG G   RLGHG +S +  
Sbjct: 2882 SDGS--SLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHV-- 2937

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN--- 276
                     P++++EL    V   + G LH   + + G VY +GD        Q+GN   
Sbjct: 2938 -------RWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHG----QQGNGNT 2986

Query: 277  -HARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
               R+P+++  L     V CG  H+   +S G
Sbjct: 2987 TVNRKPAIVRGLEAITNVACGSSHSVAWSSTG 3018



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 162/348 (46%), Gaps = 53/348 (15%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            V+  GLND  QLG            SE I  +L+P+ I+G  K +  +S           
Sbjct: 2654 VFVWGLNDKDQLGGLKGSKIKEPKFSEVIS-NLKPMNIAGGSKSLFIVSH---------- 2702

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            DG+++  G+ +NG+LGLG       P P  +  LS  F K+ A+  G   ++A+T  G+V
Sbjct: 2703 DGKVFACGEGTNGRLGLGHSHNVAQPKP--LTDLSPYFIKKVAVHSGGRHALALTIDGRV 2760

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG +          S   P+L++ L+  +++  A G  HSA +  +G 
Sbjct: 2761 FSWGEGEDGKLGHGNK---------ISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGE 2811

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGS 314
            +Y +G     ++   +     +P  +  L +    +V CG     T  LT    +Y+WG 
Sbjct: 2812 LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLALTERHWVYSWGD 2871

Query: 315  NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
             + G LG G  D    P+ V+   S+  V QV CG + + A+S+ GK+ TWG G      
Sbjct: 2872 GDFGKLGKGGSDGSSLPQNVETLNSQQ-VIQVECGAQFSLALSKNGKVWTWGKGDYF--- 2927

Query: 374  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                     +LGHG+D     P +V    +   +QVS G  H  A+ +
Sbjct: 2928 ---------RLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTD 2966



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 134/285 (47%), Gaps = 25/285 (8%)

Query: 139  TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
             ++ ++++WG N   QLG G K +K I  P   E +S +     A G +    V+  GKV
Sbjct: 2649 NIECKVFVWGLNDKDQLG-GLKGSK-IKEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             + G G +GRLG G   ++    +  ++ +P  IK     KV + + G  H+  +  +GR
Sbjct: 2707 FACGEGTNGRLGLGHSHNV-AQPKPLTDLSPYFIK-----KVAVHSGG-RHALALTIDGR 2759

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
            V+ +G+    K+         RP L+  L      +V CG  H+  +TS GELYTWGS E
Sbjct: 2760 VFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGE 2819

Query: 317  NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISEGKILTWGWGGSHGTFS 374
             G LG G       P++V+   S   V QV+CG +   T A++E +   + WG   G F 
Sbjct: 2820 YGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTE-RHWVYSWGD--GDF- 2874

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                   G+LG G       P  V    + + +QV CG   + AL
Sbjct: 2875 -------GKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL 2912



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 132/336 (39%), Gaps = 82/336 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G ++ WG N  GQLG G + AKV                                     
Sbjct: 3619 GVIHGWGHNHRGQLG-GVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATG 3677

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E L  +   Q A+  G +  +A+T  G V SWG G  G+
Sbjct: 3678 YGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGK 3737

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG ++             P+LI+ L    V   A G  HSACI  +G +Y +G     
Sbjct: 3738 LGHGSKALC---------ERPKLIESLRDKHVVSVACGGAHSACITASGELYTWGKGRYG 3788

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P  + +L      +V CG     T  ++  G +++WG  + G LG G 
Sbjct: 3789 RLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGG 3848

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P+++      + V +V CG + + A++  G + TWG G  H            +
Sbjct: 3849 SDGCKFPQKIDS-LQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYH------------R 3895

Query: 384  LGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHTGA 418
            LGHG++     P  V    +  + +QV+ G  H  A
Sbjct: 3896 LGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVA 3931



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 113/258 (43%), Gaps = 31/258 (12%)

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +AA    +  + EC  GI  +  +    +++      KV  WG     +LG  + S I  
Sbjct: 2620 EAANYRFLAQETECKLGIVNQMGSPSMRENIEC----KVFVWGLNDKDQLGGLKGSKI-- 2673

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+  + +  +K    A G      +  +G+V+  G+    ++     ++  
Sbjct: 2674 -------KEPKFSEVISNLKPMNIAGGSKSLFIVSHDGKVFACGEGTNGRLGLGHSHNVA 2726

Query: 280  RPSLISKL-PYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +P  ++ L PY  + V    GG H   LT  G +++WG  E+G LG G+      P+ V+
Sbjct: 2727 QPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVE 2786

Query: 336  GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                   +  V+CG  H+AA+ S G++ TWG G              G+LGHG++V  + 
Sbjct: 2787 S-LKCKRIRDVACGSSHSAAVTSSGELYTWGSG------------EYGRLGHGDNVPQLK 2833

Query: 395  PTIVNFGENVKALQVSCG 412
            P  V    + + +QV+CG
Sbjct: 2834 PKQVRALSHERVVQVACG 2851



 Score = 38.1 bits (87), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
            WG+ D G+LG GS  +  RP + ++ +   +  +ACG AHT+
Sbjct: 3941 WGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACGSAHTV 3982


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 152/312 (48%), Gaps = 38/312 (12%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           SGL +  V IS G  HSS + VDG+L++WGK   G+LG G++    +P  T    L  I 
Sbjct: 89  SGLTE--VGISCGLFHSS-LVVDGKLWIWGKGDGGRLGFGQEYPAFLP--TLNPNLDSI- 142

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +  ALG   SVA++  G+V +WG GG G LGH              E  PR+++     
Sbjct: 143 -RSTALGGVHSVALSSLGQVFTWGYGGFGALGHSVYHR---------ELLPRMVEGSWNA 192

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-------FQEGNHARRPSLISKLPYSE 291
           K++  A    H+A I E+G +Y +G    D  L         EG     PS +  LP   
Sbjct: 193 KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPV 252

Query: 292 EVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             V CGG+ T VLT  G+L+ WG+N N  LG G       P+ +     +  + Q++ G 
Sbjct: 253 AAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPS-LQDVRIIQIASGG 311

Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
            H+ A+++ GK+L+WG+G              GQLGH +  +   PT++    +   + +
Sbjct: 312 YHSLALTDDGKVLSWGYG------------QHGQLGHSSIENQKIPTVIEALADEHVIYI 359

Query: 410 SCGFNHTGALLE 421
           +CG + + A+ +
Sbjct: 360 ACGGSSSAAITD 371



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 23/290 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G     + P +    +  S+++ A GG H++ L+  G V+  G   FG
Sbjct: 113 IWGKGDGGRLGFGQEYPAFLPTLNPNLD--SIRSTALGGVHSVALSSLGQVFTWGYGGFG 170

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNS-NGQLGLGK 159
            LG S      L P  + G    ++  I+T   H++AIT  GELY WG++  +G+LGLG 
Sbjct: 171 ALGHSV-YHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGP 229

Query: 160 KAAKV----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + IP+KV+ L       +  GF   V +T  G++ +WGA  +  LG G + 
Sbjct: 230 NCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMV-LTQEGQLWNWGANSNYELGRGDK- 287

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                      + P+ I  L+ V++   A+G  HS  + ++G+V  +G     ++     
Sbjct: 288 --------VGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSI 339

Query: 276 NHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
            + + P++I  L   E V+   CGG  +  +T  G+LY WG+ ++  LG+
Sbjct: 340 ENQKIPTVIEAL-ADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV 388



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 122/255 (47%), Gaps = 20/255 (7%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           S+L + F   WG G +G LG         P +        ++ +A  G HT  +TE+G +
Sbjct: 156 SSLGQVFT--WGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGEL 213

Query: 93  YATGLND-FGQLGISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
           Y  G +   G+LG+  N G +       P ++  L   V  +S G   +  +T +G+L+ 
Sbjct: 214 YTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWN 273

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG NSN +LG G K     P P  +  L  +   Q A G   S+A+T  GKVLSWG G  
Sbjct: 274 WGANSNYELGRGDKVGGWKPQP--IPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQH 331

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH   SSI       ++  P +I+ L    V   A G   SA I +NG++Y++G+ A
Sbjct: 332 GQLGH---SSI------ENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGN-A 381

Query: 267 VDKMLFQEGNHARRP 281
            D  L   G    +P
Sbjct: 382 KDSQLGVPGLPETQP 396



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 67/133 (50%), Gaps = 3/133 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG      LG G     W+P    + +   +  +A GG H+L LT+ G V + G    GQ
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQ 333

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG S +I     P  I  L  E V+ I+ G   S+AIT +G+LYMWG   + QLG+    
Sbjct: 334 LGHS-SIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGV-PGL 391

Query: 162 AKVIPIPTKVECL 174
            +  P+P +V+ L
Sbjct: 392 PETQPLPVEVKFL 404



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 17/184 (9%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP----------RL----IKELEGVKVKI 242
           ++LSWG G SG+LG G E   L      + + P          RL    ++   G+    
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            + G  HS+ +  +G+++I+G     ++ F +   A  P+L   L        GG H+  
Sbjct: 96  ISCGLFHSSLV-VDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDSIRSTALGGVHSVA 154

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
           L+S G+++TWG    G LG         P  V+G ++   +  ++    HTAAI+E G++
Sbjct: 155 LSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAK-IRHIATAGTHTAAITESGEL 213

Query: 362 LTWG 365
            TWG
Sbjct: 214 YTWG 217


>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Nomascus leucogenys]
          Length = 704

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 161/321 (50%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTRNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  H L  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWGKNS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAAVTEDGRLFMWGKNSEGQIGL--KNVPNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+L  G  S +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKL--GLPSQLLGNHR-----TPQLVSEIPEKVIQVARGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +   G +YT+G++ +G LG+G
Sbjct: 310 IRDIGLMYTFGNSRHGKLGLG 330



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 30/306 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTRNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
               T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  ILVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           AVT  G++  WG    G++G     ++           P+ +    G  V   + G+ HS
Sbjct: 154 AVTEDGRLFMWGKNSEGQIGLKNVPNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V  GG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPSQLLGNH-RTPQLVSEIPEKVIQVARGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I + G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALIRDIGLMYTFG 320

Query: 366 WGGSHG 371
               HG
Sbjct: 321 -NSRHG 325


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 167/334 (50%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   ++   +    FE H S+K ++       HTL  T  G V++ G  D
Sbjct: 428 GKGSYGRLGLGDSNNQ-STLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A+T DGELY WG+   G+LG G
Sbjct: 487 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHG 546

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++   IPT V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 547 DSNSRN--IPTLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 602

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++I+ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 603 ---------YKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 652

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 653 ALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 712

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 713 SG-LDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 161/344 (46%), Gaps = 39/344 (11%)

Query: 85  FLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG 142
            ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAPSFSDAQTIEAGQYCTFVISTDG 422

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSW 201
            +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SW
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVY 260
           G G  G+LGHG          ST +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y
Sbjct: 483 GDGDYGKLGHGNS--------STQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELY 533

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGC 319
            +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG 
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGK 593

Query: 320 LGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           LG G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S 
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSS 649

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  +             + P ++      + + +S G +H  +L
Sbjct: 650 EATA-------------LRPKLIEELAATRIVDISIGDSHCLSL 680



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 116/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  +TE G +Y  G  DFG
Sbjct: 482 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFG 541

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 542 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 598

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  +E L G+F ++   G + S+A+T  G+V +WG G     G  + +++   
Sbjct: 599 -TNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATAL--- 654

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                   P+LI+EL   ++   + G  H   +  +  VY +G+ ++
Sbjct: 655 -------RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSM 694



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 643

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    +V IS G  H  +++ D E+Y WG NS GQ G G   
Sbjct: 644 LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNST 703

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L GI  +Q + G   S+A T      +V++W
Sbjct: 704 GPITK-PKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 535 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 592

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  I  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 593 KLGHGDT-NRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 649

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    ++++   +V +WG    G+ G G        
Sbjct: 650 EATAL-RPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGN------- 701

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+G+ ++  +AG  HS
Sbjct: 702 --STGPITKPKKVSGLDGIAIQQISAGTSHS 730



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 18/174 (10%)

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           + E   VY++G  +  +++        +P L      ++ +  G Y T V+++ G +   
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQYCTFVISTDGSVRAC 427

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW---KHTAAI-SEGKILTWGWGG 368
           G    G LG+G  +   + +++      S + +VS       HT A  +EG++ +WG G 
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRS-IKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 486

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGALLE 421
                        G+LGHGN     +P ++      K +  VS G+ H+ A+ E
Sbjct: 487 Y------------GKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 139/320 (43%), Gaps = 19/320 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G LG G+   R  PV        ++ A+A G  HTL LT TG + A G N FG+
Sbjct: 111 WGNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGE 170

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       + EP+ ++      +  I+ G  HS A+T  G +  WGKN+ GQLG G  A
Sbjct: 171 LGDGTTTARN-EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA 229

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V+   G      A G   S A+T  G VL+WG   SG++G G         
Sbjct: 230 NSTTPV--DVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQVGDGT-------- 279

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +T   TP  +    G  V   A G  HS  +   G V  +G  +  ++       +  P
Sbjct: 280 -TTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338

Query: 282 SLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             +  LP    +       G H+  LTS G +  WG N +G LG G+     +P  V  P
Sbjct: 339 VDV-NLPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRSTPVDVNLP 397

Query: 338 FSESPVDQVSCGWKHTAAIS 357
              + V  +  G  H+ A++
Sbjct: 398 PGTT-VTAIDNGDDHSMALT 416



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 161/383 (42%), Gaps = 32/383 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+G+LG G+      PV        ++ A+A   A++  LT TG V A G N  G+
Sbjct: 59  WGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNNTGGE 118

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N   +  P+ +       V  I+ G  H+ A+T  G L  WG N  G+LG G   
Sbjct: 119 LGDGTNTDRT-TPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAWGGNGFGELGDGTTT 177

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A+  P+P  V    G      A G   S+A+T  G VL+WG    G+LG G  +      
Sbjct: 178 ARNEPVPVNVPA--GTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNA------ 229

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +  TP  +    G  V   A G  +S  +   G V  +G  +  ++   +G    R 
Sbjct: 230 ---NSTTPVDVDLPPGTTVTAIAGGGSNSFALTSAGTVLAWGLNSSGQV--GDGTTTDRS 284

Query: 282 SLIS-KLPYSEEV--VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           + +   LP    V  + GG  H+  LTS G +  WG N +G LG G+     +P  V  P
Sbjct: 285 TPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVNLP 344

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
              +     +    H+ A+ S G IL WG             +S G+LG G   +   P 
Sbjct: 345 PDTTITAITAHDGSHSLALTSTGTILAWGL------------NSSGELGDGTTTNRSTPV 392

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
            VN         +  G +H+ AL
Sbjct: 393 DVNLPPGTTVTAIDNGDDHSMAL 415



 Score = 38.9 bits (89), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 48/120 (40%), Gaps = 18/120 (15%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           + TWG N+ G LG G+     +P  V  P   +            A  S G +L W    
Sbjct: 56  VLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAW---- 111

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQV----SCGFNHTGALLEY 422
                   G+++GG+LG G + D   P  V    G  V A+ V    +     TGALL +
Sbjct: 112 --------GNNTGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTSTGALLAW 163


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 175/418 (41%), Gaps = 63/418 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P            A++ GG ++L L   G V A G N +GQ
Sbjct: 69  WGDNASGQLGDGTTTQRSSPTAVPGLA--GAVAVSAGGEYSLALLGDGTVRAWGNNTYGQ 126

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +   P  + GL   VV I+ G +H+ A+  DG +  WG N+ GQLG G    
Sbjct: 127 LG-DGTTPHRASPGAVPGLSG-VVAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQ 184

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   V  L+G+    A  G   S+AV   G V +WG    GRLG G          
Sbjct: 185 RRTPV--AVLGLTGVVAIAA--GENHSLAVLADGTVRAWGNNTYGRLGDGT--------- 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T   +P L+  L GV     AAG  HS  +  +G V  +G  A  ++          P 
Sbjct: 232 TTQRTSPVLVSSLTGVTAI--AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPV 289

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L    E+  GG H+  L + G    WGSN +G LG G++    SP  V    S + 
Sbjct: 290 AVPGLTGVTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVS---SLTG 346

Query: 343 VDQVSCGWKHT-AAISEGKILTWG-------------------------------WGGSH 370
           V  +S G  H+ A +++G    WG                                GG H
Sbjct: 347 VTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTGVAALAAGGYH 406

Query: 371 -------GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  GT    GH++ GQLG G+      P +V     V +L  + G++H+ ALL 
Sbjct: 407 SLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGVVSL--TAGYDHSLALLS 462



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 187/426 (43%), Gaps = 71/426 (16%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG+   G+LG G++ +R  PV+ S+     + AL+ GG H+L L   G   A G N 
Sbjct: 316 ARAWGSNVSGQLGDGTVSNRTSPVLVSSLT--GVTALSAGGNHSLALLADGTARAWGANV 373

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG       +L P+ + GL   V  ++ G +HS A+  +G +  WG N+ GQLG G 
Sbjct: 374 SGQLGDGTTTQRTL-PVGLPGLTG-VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGS 431

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------- 212
            A +  P+   V  L+G+ +  A  G++ S+A+   G V +WG   SG+LG G       
Sbjct: 432 TAQRTAPV--VVPALTGVVSLTA--GYDHSLALLSDGTVRAWGNNASGQLGDGTTNQRGT 487

Query: 213 --QESSI---------------------------------LGFLRSTSEYTPRLIKELEG 237
             Q S +                                 LG   +++ +TP  +  L  
Sbjct: 488 PVQVSGLTNVVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTSNRWTPVAVSGLTN 547

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V V IAA G  +S  +  NG V  +G      +      ++  P  +  +     +  G 
Sbjct: 548 V-VAIAAGGD-YSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTPKAVPGVTNVVAIAAGA 605

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
            H   L + G +Y WG N+ G LG G+    ++P +V G    + V  ++ GW H+ A+ 
Sbjct: 606 NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPG---LTNVVAIATGWDHSLALR 662

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNH 415
           ++G +  WG+  +             QLG G+  +Y   P  V    NV A  V+ G N 
Sbjct: 663 ADGTVYAWGYNYAR------------QLGDGSTANYRQTPAPVPGLTNVVA--VTAGGNQ 708

Query: 416 TGALLE 421
           + ALL 
Sbjct: 709 SLALLS 714



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 152/347 (43%), Gaps = 35/347 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA G AH+L  T  G V A G N  GQLG       S  P  + GL   V  +S G  +S
Sbjct: 50  LASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRS-SPTAVPGLAGAVA-VSAGGEYS 107

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG +  WG N+ GQLG G    +    P  V  LSG+    A  G   ++A+   
Sbjct: 108 LALLGDGTVRAWGNNTYGQLGDGTTPHRA--SPGAVPGLSGVVAIAA--GNNHALALLSD 163

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G          +T   TP  +  L GV V I AAG  HS  +  
Sbjct: 164 GTVRAWGYNAYGQLGDGT---------TTQRRTPVAVLGLTGV-VAI-AAGENHSLAVLA 212

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V  +G+    ++          P L+S L     +  G  H+  + + G +  WG N
Sbjct: 213 DGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSLTGVTAIAAGANHSLAVLADGTVRAWGYN 272

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFS 374
            +G LG G+     +P  V G    + V ++S G  H+ A +++G    W          
Sbjct: 273 ASGRLGDGTTTQRATPVAVPG---LTGVTEISAGGGHSLALLADGTARAW---------- 319

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             G +  GQLG G   +   P +V+    V AL  S G NH+ ALL 
Sbjct: 320 --GSNVSGQLGDGTVSNRTSPVLVSSLTGVTAL--SAGGNHSLALLA 362



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 141/338 (41%), Gaps = 55/338 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG GS   R  PVV  A     + +L  G  H+L L   G V A G N  GQ
Sbjct: 419 WGHNTYGQLGDGSTAQRTAPVVVPALT--GVVSLTAGYDHSLALLSDGTVRAWGNNASGQ 476

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTG-YHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG          P+++SGL   VV +S G  +H+ A+  DG +  WG N NGQLG G  +
Sbjct: 477 LG-DGTTNQRGTPVQVSGLTN-VVALSGGKLYHALALLSDGTVRAWGYNMNGQLGDGSTS 534

Query: 162 AKVIPIPTKVECLSGIFTKQA-ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES----- 215
            +  P+      +SG+    A A G + S+A+   G V SWG G  G LG   ++     
Sbjct: 535 NRWTPV-----AVSGLTNVVAIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYSPTP 589

Query: 216 ------------------------------------SILGFLRSTSEYTPRLIKELEGVK 239
                                                 LG   +    TP  +  L  V 
Sbjct: 590 KAVPGVTNVVAIAAGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLTNV- 648

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
           V IA  G+ HS  +  +G VY +G     ++      N+ + P+ +  L     V  GG 
Sbjct: 649 VAIAT-GWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGN 707

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +  L S G ++ WG N +G LG GS     +P  V G
Sbjct: 708 QSLALLSSGAVHAWGDNSHGELGNGSTLTPPAPVAVTG 745



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 134/309 (43%), Gaps = 35/309 (11%)

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            PLR SG     V++++G  HS   T DG +  WG N++GQLG G    +    PT V  
Sbjct: 38  RPLR-SG-SPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQR--SSPTAVPG 93

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+G     A  G E S+A+ G G V +WG    G+LG G          +    +P  + 
Sbjct: 94  LAGAVAVSA--GGEYSLALLGDGTVRAWGNNTYGQLGDGT---------TPHRASPGAVP 142

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
            L GV V I AAG  H+  +  +G V  +G  A  ++        R P  +  L     +
Sbjct: 143 GLSGV-VAI-AAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTPVAVLGLTGVVAI 200

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             G  H+  + + G +  WG+N  G LG G+     SP  V    S + V  ++ G  H+
Sbjct: 201 AAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVS---SLTGVTAIAAGANHS 257

Query: 354 -AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            A +++G +  WG+  S            G+LG G       P  V     V   ++S G
Sbjct: 258 LAVLADGTVRAWGYNAS------------GRLGDGTTTQRATPVAVPGLTGVT--EISAG 303

Query: 413 FNHTGALLE 421
             H+ ALL 
Sbjct: 304 GGHSLALLA 312


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 147/301 (48%), Gaps = 19/301 (6%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DYG+LG    +   RP V +A +  S++ ++CG  H L + +   V++ G +D GQL
Sbjct: 59  GSNDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116

Query: 104 GISENIG--YSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G +   G   S  P  +  L   ++VQ++ G  HS A++ DG ++ WG NS+GQLG+G  
Sbjct: 117 GHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIG-- 174

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + K  P P ++  L+GI   Q   G   S  ++  G V  +G    G+LG G        
Sbjct: 175 STKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGD------- 227

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +     P  +K L  +KV   + G  H+A +  +G V  FG  +  ++     NH   
Sbjct: 228 --TGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEAL 285

Query: 281 PSLISKLPYSE--EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           P  + +L   E  ++ CG  HT   + S G +Y++G   NG LG       ++P  V GP
Sbjct: 286 PRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGP 345

Query: 338 F 338
           F
Sbjct: 346 F 346



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 164/338 (48%), Gaps = 27/338 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK-----HSLKALACGGAHTLFLTETGCVYATGL 97
           WG    G LGLG +E     V+ +  E+      +++ ++CG  HT+F+   G VY  G 
Sbjct: 4   WGAARNGELGLGGIEED---VILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           ND+GQLG  ++ G+   P  I+ L  + + Q+S G +H+  +    +++ WG +  GQLG
Sbjct: 61  NDYGQLG--QDKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLG 117

Query: 157 LGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              +A       P  V+ LS +   Q A G + S+A++  G++ SWG    G+LG G   
Sbjct: 118 HTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGS-- 175

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  + ++  P+ +  L G+      AG  HS  + ++G V+ FG     ++   + 
Sbjct: 176 -------TKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQLGLGDT 228

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
              + P+ +  L   +   + CG  HT VLT  G + T+G+   G LG  S +    P +
Sbjct: 229 GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNNHEALPRK 288

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE--GKILTWGWGGS 369
           V        V Q++CG  HT A  E  G+I ++G GG+
Sbjct: 289 V-FELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGN 325



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 28/306 (9%)

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           G  K + ++S G  H+  +  +G +Y  G N  GQLG  K   +    PT +  L     
Sbjct: 31  GATKAMREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQDKGHKR----PTVITALDTQSI 86

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           +Q + G   ++ V    +V SWG    G+LGH  E+         +   PR++KEL  ++
Sbjct: 87  QQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHTLEAG------GNNSRRPRMVKELSSLQ 140

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVCG 296
           +   A G  HS  +  +GR++ +G+ +  ++      +  +P  ++ L   P+ + +V G
Sbjct: 141 IVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQ-IVAG 199

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G H+ VL+  G ++ +G N  G LG+G       P  V+       V  +SCG +HTA +
Sbjct: 200 GSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKS-LRSLKVTHISCGEEHTAVL 258

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + +G +LT+G G            S GQLGH ++     P  V     ++  Q++CG  H
Sbjct: 259 TLDGGVLTFGAG------------SYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMH 306

Query: 416 TGALLE 421
           T A +E
Sbjct: 307 TMAYVE 312



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 136/281 (48%), Gaps = 28/281 (9%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           ++ WG   NG+LGLG     VI  P +    +    ++ + G + +V V   G V + G+
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LG  +     G  R      P +I  L+   ++  + G  H+  +++  +V+ +G
Sbjct: 61  NDYGQLGQDK-----GHKR------PTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109

Query: 264 DRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
                ++   L   GN++RRP ++ +L   +  +V CGG H+  L++ G +++WG+N +G
Sbjct: 110 YDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGNNSHG 169

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
            LGIGS      P+ +    +  P  Q+  G  H+  +S+   + +G+G    TF     
Sbjct: 170 QLGIGSTKNQPKPQELTS-LTGIPFCQIVAGGSHSFVLSKSGAV-FGFG--RNTF----- 220

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              GQLG G+  D  +PT V    ++K   +SCG  HT  L
Sbjct: 221 ---GQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 94/170 (55%), Gaps = 5/170 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  +G+LG+GS +++ +P   ++        +  GG+H+  L+++G V+  G N FGQ
Sbjct: 163 WGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQ 222

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +  G    P  +  L+  +V  IS G  H++ +T+DG +  +G  S GQLG     
Sbjct: 223 LGLGDT-GDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG 210
            +   +P KV  L G+   Q A G   ++A V   G++ S+G GG+G+LG
Sbjct: 282 HEA--LPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 137/267 (51%), Gaps = 11/267 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    ++  +P    A     +  ++CG  H++ +   G V+A G    GQL
Sbjct: 46  GDNSLGQLGQKREQNTEQPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    +L P+RI  L   +++Q+S G++HS A++ DG+++ WGKNS GQLGLG +++
Sbjct: 106 GIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSS 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV  L GI   Q A G   S A++  G    WG+   G+L    E+S +   +
Sbjct: 166 SQAS-PQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISK 224

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G+ H+A + ++G+V+ FGD +  ++        R P 
Sbjct: 225 ------PHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQ 278

Query: 283 LISKLP-YSEEVVCGGYHTC--VLTSG 306
           L+  +     ++ CG YHT   V T+G
Sbjct: 279 LVEGIKGQVSKIECGSYHTIAYVYTTG 305



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 28/303 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           A G  H+L L     VY+ G N  GQLG   E      EP++  G   ++  +S G  HS
Sbjct: 27  ASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQALG-TLDIDLVSCGKEHS 85

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++  +P +++ L GI   Q + G   S+A++  
Sbjct: 86  IAVCHKGRVFAWGAGSEGQLGIGE-FKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSED 144

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG G +SS        S+ +P+ +  LEG+ +   AAG  HS  +  
Sbjct: 145 GQVFSWGKNSQGQLGLGMQSS--------SQASPQKVTSLEGIPLAQVAAGGSHSFALSL 196

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSG 306
            G  Y +G  +V ++     N   +   ISK P+S +         + CG  HT VLT  
Sbjct: 197 TGTSYGWGSNSVGQLALSGENSTVQ---ISK-PHSIDALKNLGVIYISCGYEHTAVLTKD 252

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA--ISEGKILTW 364
           G+++T+G N +G L          P+ V+G   +  V ++ CG  HT A   + G++++ 
Sbjct: 253 GQVFTFGDNSSGQLQNNPRGKRRGPQLVEG--IKGQVSKIECGSYHTIAYVYTTGQVVSL 310

Query: 365 GWG 367
           G G
Sbjct: 311 GHG 313



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 24/287 (8%)

Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
           S +P R++G    E++Q ++G  HS  +  +  +Y  G NS GQLG  ++     P P  
Sbjct: 9   SRQPRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEP-- 66

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           ++ L  +     + G E S+AV   G+V +WGAG  G+LG G+   I           P 
Sbjct: 67  IQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEI--------NLMPM 118

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL-- 287
            IK L G+K+   + G  HS  + E+G+V+ +G  +  ++ L  + +    P  ++ L  
Sbjct: 119 RIKTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEG 178

Query: 288 -PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPV 343
            P + +V  GG H+  L+  G  Y WGSN  G L +    S   +  P  +        V
Sbjct: 179 IPLA-QVAAGGSHSFALSLTGTSYGWGSNSVGQLALSGENSTVQISKPHSIDA-LKNLGV 236

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED--GHSSGGQLGHG 387
             +SCG++HTA ++ +G++ T+G   S G    +  G   G QL  G
Sbjct: 237 IYISCGYEHTAVLTKDGQVFTFG-DNSSGQLQNNPRGKRRGPQLVEG 282



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E    P+         +  ++CG  H+L L+E G V++ 
Sbjct: 93  RVFA--WGAGSEGQLGIGEFKEINLMPMRIKTLGGIKIIQVSCGHYHSLALSEDGQVFSW 150

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+         P +++ L+   + Q++ G  HS A+++ G  Y WG NS GQ
Sbjct: 151 GKNSQGQLGLGMQSSSQASPQKVTSLEGIPLAQVAAGGSHSFALSLTGTSYGWGSNSVGQ 210

Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L G+ +   I  P  ++ L  +     + G+E +  +T  G+V ++G   SG+L +  
Sbjct: 211 LALSGENSTVQISKPHSIDALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNP 270

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                G         P+L++ ++G   KI    +   A +   G+V   G
Sbjct: 271 RGKRRG---------PQLVEGIKGQVSKIECGSYHTIAYVYTTGQVVSLG 311



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++    G+   QAA G   S+ +    +V S G    G+LG  +E       ++T + 
Sbjct: 12  PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKRE-------QNTEQ- 63

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLI 284
            P  I+ L  + + + + G  HS  +   GRV+ +G  +  ++    F+E N    P  I
Sbjct: 64  -PEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEIN--LMPMRI 120

Query: 285 SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSES 341
             L      +V CG YH+  L+  G++++WG N  G LG+G       SP++V       
Sbjct: 121 KTLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTS-LEGI 179

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           P+ QV+ G  H+ A+S     ++GWG  S G  +  G +S  Q+   + +D +       
Sbjct: 180 PLAQVAAGGSHSFALSLTGT-SYGWGSNSVGQLALSGENSTVQISKPHSIDAL------- 231

Query: 401 GENVKALQVSCGFNHTGAL 419
            +N+  + +SCG+ HT  L
Sbjct: 232 -KNLGVIYISCGYEHTAVL 249



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 62/133 (46%), Gaps = 17/133 (12%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +   G  H+ +L S   +Y+ G N  G LG         PE +Q       +D VSCG +
Sbjct: 25  QAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQA-LGTLDIDLVSCGKE 83

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQ 408
           H+ A+  +G++  WG G            S GQLG G   +++ +   I   G  +K +Q
Sbjct: 84  HSIAVCHKGRVFAWGAG------------SEGQLGIGEFKEINLMPMRIKTLG-GIKIIQ 130

Query: 409 VSCGFNHTGALLE 421
           VSCG  H+ AL E
Sbjct: 131 VSCGHYHSLALSE 143


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 167/351 (47%), Gaps = 41/351 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 415
             G HG            LG  N  ++  PT+  NF   +  L V+CG  H
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACGGCH 360



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 167/351 (47%), Gaps = 41/351 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNH 415
             G HG            LG  N  ++  PT+  NF   +  L V+CG  H
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACGGCH 360



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGL--PNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 154/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G ++   +P +  +    S+  +ACG  HT  +T TG +Y    G ++ 
Sbjct: 305 WGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNA 364

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+SG  +  +V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 365 GLLGHGSDVSHWI-PKRVSGPLEGLQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHG 423

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + I  P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 424 DR--ENISYPKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 481

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V+  G   V
Sbjct: 482 RLGHGDKEPRL---------KPTCVPALIDYDFHKVACGHSITVGLTTSGQVFSMGS-TV 531

Query: 268 DKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L       + P L+    + E   EV CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 532 YGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGD 591

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++   +P  V+    +  V  ++CG  +TAAI
Sbjct: 592 VEDRKTPTLVEA-LKDRHVKYIACGSNYTAAI 622



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 169/364 (46%), Gaps = 47/364 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G+LG  + +++   ++P  +  L    +  ++ G 
Sbjct: 286 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDV---IQPRMVESLAASSIGFVACGE 342

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T+ GELY WG  ++  G LG G   +  IP   +V   L G+       G   +
Sbjct: 343 FHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIP--KRVSGPLEGLQVTSVTCGPWHT 400

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   +I           P+ ++ L G++    A G  H
Sbjct: 401 ALVTSMGQLFTFGDGTFGALGHGDRENI---------SYPKEVESLSGLRTIAVACGVWH 451

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCG 296
           +A + E           +G+++ +GD   +++   +     +P+ +  L  Y   +V CG
Sbjct: 452 TAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACG 511

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G++++ GS   G LG  S D    P  V+       V++VSCG  H   +
Sbjct: 512 HSITVGLTTSGQVFSMGSTVYGQLGNPSADG-KIPCLVEDKLFGESVEEVSCGAYHVVVL 570

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N+
Sbjct: 571 TSKNEVYTWGKGAN------------GRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNY 618

Query: 416 TGAL 419
           T A+
Sbjct: 619 TAAI 622



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/201 (33%), Positives = 102/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PR ++    + +   A G  H+A +   G V+ +G+ +  ++         +P ++  L 
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLA 331

Query: 289 YSEE--VVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            S    V CG +HTC +T  GELYTWG  ++  G LG GS DV H  P+RV GP     V
Sbjct: 332 ASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGS-DVSHWIPKRVSGPLEGLQV 390

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             V+CG  HTA + S G++ T+G     GTF        G LGHG+  +  +P  V    
Sbjct: 391 TSVTCGPWHTALVTSMGQLFTFG----DGTF--------GALGHGDRENISYPKEVESLS 438

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ + V+CG  HT A++E +
Sbjct: 439 GLRTIAVACGVWHTAAVVEVI 459



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 25/178 (14%)

Query: 254 DENGRVYIFGDRAVDKMLF--QEGNHAR---RPSLISKLPYSEEVV-------CGGYHTC 301
           D  G VYI+G+   D ++    E N +    R  ++   P    +V       CG  H  
Sbjct: 235 DALGDVYIWGEIVGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIHHIACGVRHAA 294

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
           ++T  GE++TWG    G LG G +  +  P  V+   + S +  V+CG  HT A++  G+
Sbjct: 295 LVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVES-LAASSIGFVACGEFHTCAVTITGE 353

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHTG 417
           + TWG          DG  + G LGHG+DV +  P  V+   E ++   V+CG  HT 
Sbjct: 354 LYTWG----------DGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTA 401


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 166/341 (48%), Gaps = 30/341 (8%)

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
           V++ G N +G+LG  +     S E  RI  L+ KE++QI  G  H+  +T DG+++  G 
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           N NGQ G G   + + +  IP K++  SG     A  G E ++ V+  G+V + G    G
Sbjct: 622 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 678

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
           +LGHG          +TSE  P++I+ LE   V++ +  + H+  AC D N   +Y FG 
Sbjct: 679 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 729

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++   +    + P  +  L   +   V CG YHT V+T+ G+ + +G N+ G LGI
Sbjct: 730 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI 789

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF----SEDGH 378
            +++   +P +V+G        ++ CG+ HT A+  G  L       +G      S    
Sbjct: 790 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASS 849

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +S  QL       + +  +++  E    ++++CG  HT A+
Sbjct: 850 TSNLQLQQQR---FSNARLIDELEGKDIVRIACGCYHTIAV 887



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 28/234 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG      R  P    A     + ++ACG  HT+ +T +G  +A G ND+GQ
Sbjct: 727 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQ 786

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LGI + +   L P+++ G   ++E ++I  GY+H+ A+     L+ +G+N  GQLGLG+ 
Sbjct: 787 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 845

Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            A          +       ++ L G    + A G   ++AV+  G +  +G    G+LG
Sbjct: 846 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 905

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI------DENGR 258
            G          +T    P  I +  G +V + AAGF H+  +      D+N R
Sbjct: 906 TGD---------TTERVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKEDDKNER 950



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 160/396 (40%), Gaps = 44/396 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G   SR       A ++  +  +  G  HT+ LT  G V+  G ND GQ 
Sbjct: 568 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 627

Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G   +  + +  E P   SG  +       G  H+  ++ DG +   G N  GQLG G  
Sbjct: 628 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 685

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
            ++   +P  +  L     +  +  +  +V     G    + ++G    G+LGH      
Sbjct: 686 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 739

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ ++ L   ++   A G  H+  +  +G+ + FG     ++      +
Sbjct: 740 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMEN 794

Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV------- 327
              P  +   L   E  E+ CG YHT  L SG  L+ +G N+ G LG+G  +        
Sbjct: 795 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 854

Query: 328 ----LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                 S  R+        + +++CG  HT A+S+  ++          F  + H   GQ
Sbjct: 855 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY--------VFGRNNH---GQ 903

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           LG G+  + ++P  ++     +   V+ GF HT  L
Sbjct: 904 LGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVL 939



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
           G+LG G+  S   P +  + E   ++ ++C   HT+   E G +   Y  G ND+GQLG 
Sbjct: 678 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 737

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +++I   +     +   +++V ++ G +H+  +T  G+ + +GKN  GQLG+     ++ 
Sbjct: 738 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLA 797

Query: 166 PIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
           P+  +      ECL      +   G+  ++A+  G  + ++G    G+LG G+   SS  
Sbjct: 798 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 851

Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++  RLI ELEG  +   A G  H+  + +NG +Y+FG     ++   +   
Sbjct: 852 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 911

Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
              P  I          V  G YHT VLT G E
Sbjct: 912 RVYPFPIDDFVGKRVALVAAGFYHTVVLTGGKE 944



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  +G  DYG+LG+ ++E++  PV V    E+     + CG  HT+ L     ++A G N
Sbjct: 776 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 835

Query: 99  DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
           D+GQLG+     S      L+  R S  +       K++V+I+ G +H+ A++ +G +Y+
Sbjct: 836 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 895

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +G+N++GQLG G    +V P P  ++   G      A GF  +V +TGG +
Sbjct: 896 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRVALVAAGFYHTVVLTGGKE 944


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 155/325 (47%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      + V IS G  H++ +T +G+LYM+G N  GQLGLG 
Sbjct: 34  FGKSNFAENI-----PSKFWFRNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 88

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  PT V+ L    TK A  G   ++  T  G + + G  G G+LG G       
Sbjct: 89  K--NTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEGQLGLGDTEERTT 146

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  AAG   SA + E+G+++++GD +  ++   +  +  
Sbjct: 147 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVS 198

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGP 337
            P  +        + CG YH+  +T  GELYT+G  ENG LG+    + +S  P+ V G 
Sbjct: 199 VPCQVDVGKPISSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 258

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 396
             +  V++V+CG +HT  ++E  + T+G G              GQLGHG  +     P 
Sbjct: 259 MEK--VNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFKTSVPK 304

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V      K   ++CG +HT  + E
Sbjct: 305 SVKHLRKCKIRNITCGESHTAVIAE 329



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/293 (35%), Positives = 152/293 (51%), Gaps = 24/293 (8%)

Query: 22  SKLGICKR--WISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALAC 78
           +KL +C R   +  T      A  GNG+ G+LGLG  E R    + S F  +H +K LA 
Sbjct: 106 TKLAVCGRNHTLVYTENGNMYAAGGNGE-GQLGLGDTEERTTFHLISFFTNQHKIKQLAA 164

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G   +  +TE G ++  G N  GQ+G+++    S+ P ++  + K +  IS GY+HS+ I
Sbjct: 165 GSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSV-PCQVD-VGKPISSISCGYYHSAFI 222

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGG 196
           T DGELY +G+  NG+LGL  +  K   +P  V    GI  K  + A G E +V +T  G
Sbjct: 223 TGDGELYTFGEPENGKLGLLPEQLKNSRVPQPV---LGIMEKVNKVACGGEHTVVLTETG 279

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V ++G G  G+LGHG        L  TS   P+ +K L   K++    G  H+A I EN
Sbjct: 280 -VYTFGLGQYGQLGHGT------LLFKTS--VPKSVKHLRKCKIRNITCGESHTAVIAEN 330

Query: 257 GRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHTCVLTS 305
           G ++ FGD    K+   E N A +  P+L S  L ++  +V CGG H  V  +
Sbjct: 331 GLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 383



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 146/296 (49%), Gaps = 37/296 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLGS  +  +P    A +    K   CG  HTL  TE G +YA G N  G
Sbjct: 75  MFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHTLVYTENGNMYAAGGNGEG 134

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL 
Sbjct: 135 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 192

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    + +P +V+    I +   + G+  S  +TG G++ ++G   +G+LG   E    
Sbjct: 193 DKT--YVSVPCQVDVGKPISS--ISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 245

Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
             L+++    P L I E    KV   A G  H+  + E G VY F     G      +LF
Sbjct: 246 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 298

Query: 273 QEG-----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +        H R+  + +       + CG  HT V+   G ++T+G   +G LG+G
Sbjct: 299 KTSVPKSVKHLRKCKIRN-------ITCGESHTAVIAENGLMFTFGDGRHGKLGLG 347



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 163/348 (46%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           ++CG  HT  +T  G +Y  G ND+GQLG+ S+N  +  +P  +  LK E  +++  G +
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVH--KPTCVKALKPEKTKLAVCGRN 114

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T +G +Y  G N  GQLGLG    +     T    +S  FT     KQ A G   
Sbjct: 115 HTLVYTENGNMYAAGGNGEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 168

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S AVT  G++  WG    G++G   ++           Y     +   G  +   + G+ 
Sbjct: 169 SAAVTEDGQLFVWGDNSEGQIGLADKT-----------YVSVPCQVDVGKPISSISCGYY 217

Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
           HSA I  +G +Y FG+    K  +L ++  ++R P  ++  +    +V CGG HT VLT 
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 277

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +YT+G  + G LG G++    S  +      +  +  ++CG  HTA I+E G + T+
Sbjct: 278 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMFTF 336

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G  G HG            LG  N  +   P + +   +   L V+CG
Sbjct: 337 G-DGRHGKLG---------LGEENFANQFDPALCSNFLSFTVLLVACG 374


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 165/341 (48%), Gaps = 30/341 (8%)

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
           V++ G N +G+LG  +     S E  RI  L+ KE++QI  G  H+  +T DG+++  G 
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFE--RIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 150 NSNGQLGLG--KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           N NGQ G G   + + +  IP K++  SG     A  G E ++ V+  G+V + G    G
Sbjct: 433 NDNGQCGQGGTARVSHLSEIP-KMD--SGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS--ACIDEN-GRVYIFGD 264
           +LGHG          +TSE  P++I+ LE   V++ +  + H+  AC D N   +Y FG 
Sbjct: 490 QLGHGN---------TTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGR 540

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
               ++   +    + P  +  L   +   V CG YHT V+T  G+ + +G N+ G LGI
Sbjct: 541 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGI 600

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF----SEDGH 378
            +++   +P +V+G        ++ CG+ HT A+  G  L       +G      S    
Sbjct: 601 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASS 660

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +S  QL       + +  +++  E    ++++CG  HT A+
Sbjct: 661 TSNLQLQQQR---FSNARLIDELEGKDIVRIACGCYHTIAV 698



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 19/273 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---YATGLNDFGQLGI 105
           G+LG G+  S   P +  + E   ++ ++C   HT+   E G +   Y  G ND+GQLG 
Sbjct: 489 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGH 548

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +++I   +     +   +++V ++ G +H+  +TV G+ + +GKN  GQLG+     ++ 
Sbjct: 549 NDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLA 608

Query: 166 PIPTK-----VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE--SSIL 218
           P+  +      ECL      +   G+  ++A+  G  + ++G    G+LG G+   SS  
Sbjct: 609 PVQVRGGLERQECL------EIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTS 662

Query: 219 GFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                   ++  RLI ELEG  +   A G  H+  + +NG +Y+FG     ++   +   
Sbjct: 663 NLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTE 722

Query: 278 ARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
              P  I          V  G YHT VLT G E
Sbjct: 723 RVYPFPIDDFVGKRIALVAAGFYHTVVLTGGKE 755



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/396 (24%), Positives = 160/396 (40%), Gaps = 44/396 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G   SR       A ++  +  +  G  HT+ LT  G V+  G ND GQ 
Sbjct: 379 GQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYNDNGQC 438

Query: 104 GI--SENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G   +  + +  E P   SG  +       G  H+  ++ DG +   G N  GQLG G  
Sbjct: 439 GQGGTARVSHLSEIPKMDSGSSQ--AHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNT 496

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG---KVLSWGAGGSGRLGHGQESSI 217
            ++   +P  +  L     +  +  +  +V     G    + ++G    G+LGH      
Sbjct: 497 TSE--SVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHND---- 550

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ ++ L   ++   A G  H+  +  +G+ + FG     ++      +
Sbjct: 551 -----SIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMEN 605

Query: 278 ARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV------- 327
              P  +   L   E  E+ CG YHT  L SG  L+ +G N+ G LG+G  +        
Sbjct: 606 QLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQ 665

Query: 328 ----LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
                 S  R+        + +++CG  HT A+S+  ++          F  + H   GQ
Sbjct: 666 LQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMY--------VFGRNNH---GQ 714

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           LG G+  + ++P  ++     +   V+ GF HT  L
Sbjct: 715 LGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 22/223 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  DYG+LG      R  P    A     + ++ACG  HT+ +T +G  +A G ND+GQ
Sbjct: 538 FGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQ 597

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LGI + +   L P+++ G   ++E ++I  GY+H+ A+     L+ +G+N  GQLGLG+ 
Sbjct: 598 LGI-DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS 656

Query: 161 AA----------KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            A          +       ++ L G    + A G   ++AV+  G +  +G    G+LG
Sbjct: 657 NASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLG 716

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G          +T    P  I +  G ++ + AAGF H+  +
Sbjct: 717 TGD---------TTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 92/171 (53%), Gaps = 15/171 (8%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           A  +G  DYG+LG+ ++E++  PV V    E+     + CG  HT+ L     ++A G N
Sbjct: 587 AFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRN 646

Query: 99  DFGQLGI-----SENIGYSLEPLRISGLK-------KEVVQISTGYHHSSAITVDGELYM 146
           D+GQLG+     S      L+  R S  +       K++V+I+ G +H+ A++ +G +Y+
Sbjct: 647 DYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYV 706

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +G+N++GQLG G    +V P P  ++   G      A GF  +V +TGG +
Sbjct: 707 FGRNNHGQLGTGDTTERVYPFP--IDDFVGKRIALVAAGFYHTVVLTGGKE 755


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 169/368 (45%), Gaps = 47/368 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CG  H + +T+ G  ++ G    G+LG       S  P  I   K   V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
            +HS A+T  G+LY WG  +     LG ++     IP KV C  + G+     + G   +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG  S  +         TPR ++   G+K    A G  H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478

Query: 250 SACIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--E 292
           +A + E             +G ++ +GD   DK     G++  R  P  I+ L      E
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDG--DKGKLGHGDNKPRLAPQCITALVDKSFSE 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V C    T  LT+ G +YT GSN  G LG    + + SP  V+    +S V+++SCG  H
Sbjct: 537 VACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEISCGSHH 595

Query: 353 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            A + S  ++ TWG G              GQLGHG+  +   PT+V+   + +  ++ C
Sbjct: 596 VAVLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDKQVKRIVC 643

Query: 412 GFNHTGAL 419
           G N + A+
Sbjct: 644 GSNFSAAI 651



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 144/333 (43%), Gaps = 32/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+      P +   F+  +++ +ACG  H+  +T +G +Y    G    
Sbjct: 332 WGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++ GL +   V  +S G  H++ IT  G L+ +G  + G LG G
Sbjct: 392 GLLGHRSEASHWI-PKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
            ++  + P   +VE  +G+ T + A G   + AV                G + +WG G 
Sbjct: 451 DRSGCITP--REVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGD 508

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG     L          P+ I  L        A  +  +  +   GRVY  G  
Sbjct: 509 KGKLGHGDNKPRLA---------PQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSN 559

Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++     N      +   L  S  EE+ CG +H  VLTS  E+YTWG  ENG LG G
Sbjct: 560 VYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHG 619

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             +   +P  V     +  V ++ CG   +AAI
Sbjct: 620 DCENKCTPTLVD-ILRDKQVKRIVCGSNFSAAI 651



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 43/272 (15%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E    +  +  + G   ++ VT  G+  SWG    GRLGHG E+ +          
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNH---ARRP 281
            P+LIK  +G+ V++ A G  HS  +  +G +Y +GD A    L     E +H    +  
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVC 409

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L+  L  S  V CG +HT ++TS G L+T+G    G LG G      +P  V+  F+  
Sbjct: 410 GLMEGLRVS-HVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVET-FNGL 467

Query: 342 PVDQVSCGWKHTAAISE--------------GKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              +V+CG  HTAA+ E              G + TWG G              G+LGHG
Sbjct: 468 KTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDK------------GKLGHG 515

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++   + P  +    +    +V+C +  T AL
Sbjct: 516 DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 17/201 (8%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V+  + G  H+  + + G  + +G+ A  ++          P LI   
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNF 357

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                E + CG YH+C +TS G+LYTWG  +  +G LG  S      P++V G      V
Sbjct: 358 KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRV 417

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             VSCG  HTA I S G++ T+G     GTF        G LGHG+    I P  V    
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFG----DGTF--------GALGHGDRSGCITPREVETFN 465

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            +K L+V+CG  HT A++E +
Sbjct: 466 GLKTLKVACGVWHTAAVVELM 486


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2732 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2791

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 2792 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 2850

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 2851 GH--------FSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2961

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2962 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3008

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3009 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3045



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 163/353 (46%), Gaps = 29/353 (8%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 3797 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 3854

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 3855 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 3912

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 3913 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 3963

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 3964 CLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAV 4023

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---KILTWG- 365
            YTWG  +   LG GS D +  P +VQG      V  ++ G  H    +E    K+  WG 
Sbjct: 4024 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGL 4082

Query: 366  --WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
              W    G     G +  GQLG G       P +V   +  K  +V+CG  HT
Sbjct: 4083 PRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 130/267 (48%), Gaps = 23/267 (8%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++  +     +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I+
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPTMIA 505

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV I+ G  +S+AITVDGELY WG+ + G+LG G    +  P+   V  L
Sbjct: 506 AFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 563

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 564 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 614

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 615 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 674

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +V  G  H   LT  GE+++WGSN+ 
Sbjct: 675 VDVAVGSTHCLALTDDGEVHSWGSNDK 701



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2770 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRH 2829

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2830 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKAKRIRDIACGSSHSAAITS 2887

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 2888 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 2938

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2939 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2998

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2999 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3053

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3054 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 2788 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 2846

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 2847 DGKLGHFSRMNCD-KPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 2905

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 2906 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2960

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 2961 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3014

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3015 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3074

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILT 363
            QG      + +V+CG  H+ A +   + T
Sbjct: 3075 QG-LEGQKITRVACGSSHSVAWTTVDVTT 3102



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 2842 WGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 2901

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 2902 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 2959

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 2960 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3016

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3017 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3066

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3067 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3097



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C +     +  + C     L L+ +G VY                  +L P+ I  L
Sbjct: 405 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 453

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G      +  PT +   +G  
Sbjct: 454 SSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPTMIAAFNG-- 509

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S A+T  G++ +WG G  GRLGHG          S  + TP L
Sbjct: 510 -KQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGS---------SEDQTTPML 559

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 560 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 619

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD V+
Sbjct: 620 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD-VA 678

Query: 348 CGWKHTAAIS-EGKILTWG 365
            G  H  A++ +G++ +WG
Sbjct: 679 VGSTHCLALTDDGEVHSWG 697



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 129/280 (46%), Gaps = 34/280 (12%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 3927

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 3928 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 3985

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +     P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 3986 -GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4042

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF----------------- 262
                     PR ++ L+G KV   A G LH  C  E+GR+ +F                 
Sbjct: 4043 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTW 4095

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
            GD    ++     N  +RP L++ L   +   V CG  HT
Sbjct: 4096 GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + +AF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 482 WGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAAITVDGELYTWGR 540

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +    + GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 600

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 601 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 658

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L+  L+G KV   A G  H   + ++G V+ +G
Sbjct: 659 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWG 697



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2724 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2781

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GK+ + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2833

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 2834 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYS 2893

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2894 WGLGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2949

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2950 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2991



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 4/164 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P++ +A +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 538 WGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 597

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 598 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             + +  P  ++ L G      A+G    +A+T  G+V SWG+ 
Sbjct: 658 --EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 699



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 137/332 (41%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3757 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3815

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 3816 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3875

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 3876 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 3926

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 3927 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 3986

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D   +P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3987 SDGCKTPMKIDS-LTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4033

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4034 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4065



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P +I    G +    V   A 
Sbjct: 471 LALSSNGEVFSWGCGDGGRLGHGD---------TTYLEEPTMIAAFNGKQAGKHVVHIAC 521

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 522 GSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 581

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ V+    +  + +V CG + + A++ +G+
Sbjct: 582 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQ 640

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G +             +LGHG D     P +++  +  K + V+ G  H  AL 
Sbjct: 641 VYTWGKGDNQ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALT 688

Query: 421 E 421
           +
Sbjct: 689 D 689



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ +   P  +  L+ K+VV ++ G  H  A+T DGE++ WG N   Q    L
Sbjct: 652 LGHGTDEHVRF---PKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTL 708

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 709 FSNKKQPKALP 719



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHT 353
           G H   L+S GE+++WG  + G LG G    L  P  +    G  +   V  ++CG  ++
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 526

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ +G++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 527 AAITVDGELYTWGRGNY------------GRLGHGSSEDQTTPMLVTALKGLKVVDVACG 574



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTL 84
            WG+ D G+LG G+  +  RP + +A +   +  +ACG AHTL
Sbjct: 4095 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136


>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
 gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
          Length = 508

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 102/332 (30%), Positives = 155/332 (46%), Gaps = 43/332 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D+ +LG G+ E+R  PV      +  +KA+A GG  +L L + G V++ G ND+ Q
Sbjct: 202 WGRNDWAQLGDGTKETRHAPVDVMHLARFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQ 261

Query: 103 LGISENIGYSLE--PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK- 159
           LG  +  G++    P+++ GL   V  +  G  HS A+  DG ++ WG    GQLG G  
Sbjct: 262 LGAGD-TGFNAHTIPVKVEGLSG-VTAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTN 319

Query: 160 ---KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
               AA V+P       LSG+  K  + G+  S+A+   G V SWG    G+LG G    
Sbjct: 320 SDHNAAAVVP------GLSGV--KAVSAGYRHSLALLRDGTVWSWGYNAQGQLGDGT--- 368

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLH----SACIDENGRVYIFGDRAVDKM 270
                 +T+  TP  +  L G    IAA  +   H    S  + E+G V+ +G    D  
Sbjct: 369 ------NTNRNTPVKVASLGGRVKAIAASSSNVFHDPSFSLALLEDGTVWSWGTN--DWH 420

Query: 271 LFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              +G +  R  P  +S L   + +  GG H+  L   G ++ WG+N++G +G G     
Sbjct: 421 QLGDGTNTSRNTPVKVSDLSGVKAIAPGGRHSLALLKDGTVWGWGANDHGQVGTGD---- 476

Query: 329 HSPERVQGPFSESPVDQVSC----GWKHTAAI 356
            +P+R   P     +  V      GW   AA+
Sbjct: 477 GTPDRYAAPVKIEGISHVKAIAAGGWHSIAAL 508



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 185/435 (42%), Gaps = 62/435 (14%)

Query: 16  QDIKLGSKLGI-CKRWISSTLQRRFAA-----------------LWGNGDYGRLGLGSLE 57
           QD   GS       +W+S T    FA                  +WG  D+G LG G+ +
Sbjct: 105 QDTSTGSTWVFPAGQWLSDTATHTFAGELLGSGEVVAPTLWQGWVWGQNDHGELGDGTNK 164

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEP 115
            R+ P      ++  + A+  GG  +L L   G V++ G ND+ QL  G  E     ++ 
Sbjct: 165 RRFAPSPMPYLDQVGVSAIDGGGWFSLALLNDGSVWSWGRNDWAQLGDGTKETRHAPVDV 224

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           + ++  +  V  I+ G   S A+  DG ++ WG N   QLG G        IP KVE LS
Sbjct: 225 MHLA--RFGVKAIAAGGWTSLALLKDGTVWSWGANDWRQLGAGDTGFNAHTIPVKVEGLS 282

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G+      +G   S+A+   G V SWG G  G+LG G  S               ++  L
Sbjct: 283 GV--TAVDIGGWHSLALREDGTVWSWGHGHQGQLGDGTNS---------DHNAAAVVPGL 331

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-------- 287
            GVK    +AG+ HS  +  +G V+ +G  A  ++      +   P  ++ L        
Sbjct: 332 SGVKA--VSAGYRHSLALLRDGTVWSWGYNAQGQLGDGTNTNRNTPVKVASLGGRVKAIA 389

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
             S  V      +  L   G +++WG+N+   LG G+    ++P +V      S V  ++
Sbjct: 390 ASSSNVFHDPSFSLALLEDGTVWSWGTNDWHQLGDGTNTSRNTPVKVS---DLSGVKAIA 446

Query: 348 CGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD--YIHPTIVNFGENV 404
            G +H+ A + +G +  WGWG           +  GQ+G G+     Y  P  +    +V
Sbjct: 447 PGGRHSLALLKDGTV--WGWGA----------NDHGQVGTGDGTPDRYAAPVKIEGISHV 494

Query: 405 KALQVSCGFNHTGAL 419
           KA+  + G++   AL
Sbjct: 495 KAI-AAGGWHSIAAL 508


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
            +WG  D  +LG G   S+ +  V S F          GG+ +LF+ +  G +YA G    
Sbjct: 2898 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2956

Query: 101  GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G+LG+  S N+ Y   P  I  L + V++   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2957 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3013

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3014 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3069

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+LIK L G ++   A G     +  + + G V+ +GD    K+   
Sbjct: 3070 -------NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 3122

Query: 274  EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  I +L   E  ++ CG   +  LT  GE++TWG  +   LG GS   +  P
Sbjct: 3123 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 3182

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              ++    +  V  V+ G  H  A+++ G++  WG         ++ H   GQ G+G  +
Sbjct: 3183 TVIES-LKDKKVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGTTI 3229

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P +V+  E+V   +V+CG +H+ A
Sbjct: 3230 VNRKPALVHGLEDVHINRVACGSSHSIA 3257



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G VYATG    G
Sbjct: 3875 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3933

Query: 102  QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI       +   LE ++   +KK  + +++G  H  A++ D ++Y WG+  +G+LG 
Sbjct: 3934 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3991

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + A     P  +E L G      A G   S A+T  G++ +WG G  GRLGHG     
Sbjct: 3992 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 4045

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+LI+EL G KV   A  +G   + CI ++  V+ +GD    K+     
Sbjct: 4046 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4100

Query: 276  NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ + +  P++
Sbjct: 4101 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 4160

Query: 334  VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S EG++ TW            G +  GQLG       
Sbjct: 4161 VAA-LQGKKIISIATGSLHCVACSDEGEVFTW------------GDNDEGQLGDDTTNAI 4207

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K   V+CG  HT A
Sbjct: 4208 QRPRLVSALQGKKITNVACGSAHTLA 4233



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3005 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 3064

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +NI   L+P  I  L    +VQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3065 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 3122

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+ +   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 3123 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 3179

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P +I+ L+  KV   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3180 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3228

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
               R+P+L+  L   +   V CG  H+   T
Sbjct: 3229 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 3259



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 52/351 (14%)

Query: 89   TGC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
             GC V+  GLND  QLG          +  +    L P+ I+G  K +  +S        
Sbjct: 2892 VGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH------- 2944

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG   +  +P P  +  LS    K+ A+  G + ++A+T  
Sbjct: 2945 ---EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLD 2999

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   ++           P++I+ L   K++  A G  HSA I  
Sbjct: 3000 GKVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITS 3050

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
            +G +Y +G     ++   +     +P LI  L      +V CG     T  LT  G +++
Sbjct: 3051 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 3110

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
            WG  + G LG G  +  + P  ++   +   V Q+ CG + + A+++ G++ TWG G   
Sbjct: 3111 WGDGDFGKLGRGGSEGCNIPHNIER-LNALEVVQIECGAQFSLALTKTGEVWTWGKGDYF 3169

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG+D     PT++   ++ K + V+ G  H  A+ +
Sbjct: 3170 ------------RLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 3208



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 37/356 (10%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P  C    + ++K + C     L LT+TG V+         +  S +     E   +SG+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFF--------MYYSSDTQCPQEMTGLSGI 513

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
               +       H  A+T D E+Y WG    G+LG G  + K    PT ++ L G     
Sbjct: 514 NMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTK--EEPTLIQALKGKDIID 571

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G   S A++  G + +WG G  GRLGHG     L         TP +I  L    + 
Sbjct: 572 VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCL---------TPTMISALSDEHII 622

Query: 242 IAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
             A G  + H+ CI   G+VY +GD    K+     + ++ P LI KL   +  +V CG 
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGA 682

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             +  L+  G +YTWG  E   LG  + + +  PE V+    +  V  VS G  H  A++
Sbjct: 683 QFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEV-LRDRKVVGVSLGVSHVLALT 741

Query: 358 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           + G++  +GWG +             Q+   +++    P ++   +  K + V CG
Sbjct: 742 DQGEV--YGWGKNENK----------QICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 20/261 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   ++  P +  A +   +  + CGG ++  ++  G +Y  G  ++G+
Sbjct: 539 WGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGR 598

Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTG--YHHSSAITVDGELYMWGKNSNGQLGL 157
           L  G +E+    L P  IS L  E +++++ G  Y H+  IT  G++Y WG    G+LG 
Sbjct: 599 LGHGTAED---CLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGR 655

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G        +P  +E L  +   Q   G + SVA++  G V +WG G   +LGH  E ++
Sbjct: 656 GGSDGS--KLPRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENV 713

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                      P +++ L   KV   + G  H   + + G VY +G     ++       
Sbjct: 714 ---------RFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELF 764

Query: 278 ARRPSLISKLPYSEEV-VCGG 297
            ++P LI  L   + V VC G
Sbjct: 765 VQQPRLIEALKGQKVVGVCCG 785



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 105/220 (47%), Gaps = 16/220 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G+ E    P + SA     +  +ACG   AHTL +T  G VY+ G  D+
Sbjct: 591 WGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDY 650

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G  L P  I  L+  ++VQ+  G   S A++ DG +Y WGK    +  LG 
Sbjct: 651 GKLGRGGSDGSKL-PRLIEKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWK--LGH 707

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              + +  P  VE L        +LG    +A+T  G+V  WG   + ++    E  +  
Sbjct: 708 PTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFV-- 765

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGR 258
                    PRLI+ L+G KV     G   S A  D+N R
Sbjct: 766 -------QQPRLIEALKGQKVVGVCCGPAQSFAWTDDNER 798



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 34/300 (11%)

Query: 127  QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
            Q STG   S   TV   +++WG N   QLG G K +KV  +P + + LS ++    A G 
Sbjct: 2882 QDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAGGS 2936

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA-- 244
            +    V+  GK+ + G G +GRLG G  +++           PR I  L    +K  A  
Sbjct: 2937 KSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVAVH 2987

Query: 245  AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            +G  H+  +  +G+V+ +G+    K+      +  +P +I  L   +  ++ CG  H+  
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047

Query: 303  LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEG 359
            +TS GELYTWG  E G LG G       P+ ++       V QV+CG +     A   EG
Sbjct: 3048 ITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIV-QVACGSRDAQTLALTDEG 3106

Query: 360  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             + +WG     G F        G+LG G       P  +     ++ +Q+ CG   + AL
Sbjct: 3107 WVFSWG----DGDF--------GKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLAL 3154



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 137/335 (40%), Gaps = 81/335 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IP---------------------------------- 166
            G +Y WG N  GQLG G + AKV IP                                  
Sbjct: 3870 GTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3928

Query: 167  ----------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                            +PT +E +  +F K+ A+  G +  +A++    V SWG G  G+
Sbjct: 3929 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3988

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG         R   E TP+LI+ L+G ++   A G  HSA I   G++Y +G     
Sbjct: 3989 LGHGN--------RLACE-TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 4039

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P LI +L   +  +V CG     T  +T    +++WG  + G LG G 
Sbjct: 4040 RLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4099

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P++++   +   V +V CG + + A++  G + TWG G  H            +
Sbjct: 4100 SDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH------------R 4146

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            LGHG       P  V   +  K + ++ G  H  A
Sbjct: 4147 LGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA 4181



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 20/216 (9%)

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGF-LHSACIDENGRVYIFGDRAVDKM 270
           Q   +     S+    P+ +  L G+  +KIAA     H   + ++  VY +G+    ++
Sbjct: 488 QTGKVFFMYYSSDTQCPQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRL 547

Query: 271 LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              + +    P+LI  L   +  +V CGG ++  +++ G LYTWG    G LG G+ +  
Sbjct: 548 GHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDC 607

Query: 329 HSPERVQGPFSESPVDQVSCG--WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +P  +    S+  + +V+CG  + HT  I S+GK+ +WG  G +G     G S G +L 
Sbjct: 608 LTPTMISA-LSDEHIIKVACGSFYAHTLCITSQGKVYSWG-DGDYGKLGRGG-SDGSKL- 663

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    P ++   +NVK +QV CG   + AL E
Sbjct: 664 ---------PRLIEKLQNVKIVQVYCGAQFSVALSE 690


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  120 bits (302), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 31/253 (12%)

Query: 90   GCVYATGLNDFGQLG---------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAIT 139
            G +++ G N  GQ+G         +S+ I  +  P  I  LK  +V  ++ GY HS AIT
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNF-PKLIVPLKDTIVTSVACGYQHSVAIT 1558

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
              G +  WG NS+ QLGLG+K+   +P PT +  L+ I  +  + G E ++A+   G+V 
Sbjct: 1559 YAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNI--QSVSCGSEHTLALDYIGQVF 1616

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G LGHG E             +P++I+ L+G+ V     G LHS  + +N +V
Sbjct: 1617 SWGNGEGGLLGHGNEDVCP---------SPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667

Query: 260  YIFGDR-----AVDKMLF-QEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELY 310
            Y +G        +DK LF  E  +   P  +          ++  G  H+  L   G++Y
Sbjct: 1668 YSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVY 1727

Query: 311  TWGSNENGCLGIG 323
             WG N NG +G+G
Sbjct: 1728 GWGYNMNGQIGLG 1740



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 98/362 (27%), Positives = 157/362 (43%), Gaps = 36/362 (9%)

Query: 73   LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE-PLRISGLKKEVVQISTG 131
            + ++ACG  H++ +T  G V A G N   QLG+ E    S+  P  I  L   +  +S G
Sbjct: 1544 VTSVACGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTN-IQSVSCG 1602

Query: 132  YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
              H+ A+   G+++ WG    G LG G +   V P P  +E L G+       G   S+ 
Sbjct: 1603 SEHTLALDYIGQVFSWGNGEGGLLGHGNE--DVCPSPKIIEALKGLNVDFIVCGGLHSLV 1660

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY--TPRLIK-ELEGVKVKIAAAGFL 248
            +T   +V SWG    G+LG  ++        +   Y  TP+ +K  LEGV V   AAG  
Sbjct: 1661 LTKNRQVYSWGRNEGGQLGIDKK-----LFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEA 1715

Query: 249  HSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH-TCVLT 304
            HS  +  NG+VY +G   +  +   +  +      P LI KL   E++ C G + +  L 
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQLG 1775

Query: 305  SGGELYTWGSNENGCLG-------IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
               E     S  N  L          ++  +  P+++   F + PV  VSCG  H+ A+ 
Sbjct: 1776 LEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDC-FHQIPVLHVSCGHNHSLALV 1834

Query: 357  --SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
                   + + WG       + G    G+ G  + V    P  + + ++V    ++CG  
Sbjct: 1835 VADTKHYMLFAWG-----MHKHGQLGIGETGQNSSV----PRPITYLQDVTTYSMACGSY 1885

Query: 415  HT 416
            H+
Sbjct: 1886 HS 1887



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 91/335 (27%), Positives = 145/335 (43%), Gaps = 29/335 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+  + +LGLG       P         ++++++CG  HTL L   G V++ G  + G 
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGL 1625

Query: 103  LGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG   N      P  I  LK   V  I  G  HS  +T + ++Y WG+N  GQLG+ KK 
Sbjct: 1626 LG-HGNEDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKL 1684

Query: 162  AK----VIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                   +  P +V+  L G+   Q A G   S+A+   G+V  WG   +G++G G ++ 
Sbjct: 1685 FTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTD 1744

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRVYIFGDRAVDKMLFQ 273
                  +   Y P+LI +L  ++ KI   G   S  +    E  ++    +  +D+   Q
Sbjct: 1745 ------TYPVYEPQLIPKLNKIE-KIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQ 1797

Query: 274  EGNHARRPSLISK-------LPYSEEVVCGGYHTCVL----TSGGELYTWGSNENGCLGI 322
            +   A     I K       +P    V CG  H+  L    T    L+ WG +++G LGI
Sbjct: 1798 DQKRAVTDVFIPKKMDCFHQIPVL-HVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGI 1856

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            G      S  R      +     ++CG  H+  ++
Sbjct: 1857 GETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVA 1891



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 23/234 (9%)

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G + SWG    G++G+  +       +      P+LI  L+   V   A G+ HS  I  
Sbjct: 1500 GVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITY 1559

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRP--SLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
             G V  +GD +  ++   E + +  P  + I  L   + V CG  HT  L   G++++WG
Sbjct: 1560 AGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPALTNIQSVSCGSEHTLALDYIGQVFSWG 1619

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGT 372
            + E G LG G+ DV  SP+ ++       VD + CG  H+  +++ + + +W        
Sbjct: 1620 NGEGGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQVYSW-------- 1670

Query: 373  FSEDGHSSGGQLG-----HGNDVDYI-HPTIVNFG-ENVKALQVSCGFNHTGAL 419
                G + GGQLG       N+  Y+  P  V    E V  +Q++ G  H+ AL
Sbjct: 1671 ----GRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGVIQIAAGEAHSLAL 1720


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 156/337 (46%), Gaps = 36/337 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +   F+  +++   CG  HT  +T +G +YA G  D   
Sbjct: 328 WGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNA 387

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG+     +  +P+RI G  +   V  IS G  H++ +T  G+L+ +G  + G LG G
Sbjct: 388 GLLGLGSGASH-WKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG 446

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-------TGGGKVLSWGAGGSGRLGH 211
            + +    IP +VE L+G  T + A G   S AV       +  GK+ +WG G  G+LGH
Sbjct: 447 DRIS--TNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGH 504

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--DRAVDK 269
           G  +S L          P  + EL+    +  A G   +  +  +G+VY  G  D + D 
Sbjct: 505 GDIASRL---------IPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPSQDD 555

Query: 270 MLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++       R PS I       + +EV CG +H  VL S  E+YTWG   NG LG G  +
Sbjct: 556 VV-------RAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 608

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
               P  V+       V +V CG  +TA I   K +T
Sbjct: 609 YRRMPTLVKA-LKGKQVRKVVCGSNYTATICLHKPIT 644



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 172/376 (45%), Gaps = 51/376 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P V  +      ++++CG  + + +T+ G +Y+ G    G+LG      Y   P  I   
Sbjct: 295 PKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGV-CSYVPHPKLIDEF 353

Query: 122 KKEVVQIST-GYHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
               V+++  G  H+ A+T  G+LY WG   ++ G LGLG  A+   P+    + + GI 
Sbjct: 354 DGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQ-MEGIN 412

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            +  + G   +  VT  GK+ ++G G  G LGHG            S   PR ++ L G 
Sbjct: 413 VRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDR---------ISTNIPREVEALNGC 463

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ----------EGNHARR--PSLISK 286
           +    A G  HSA +     V +FG+ +    LF            G+ A R  P  +++
Sbjct: 464 RTIRTACGVWHSAAV-----VSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTE 518

Query: 287 LPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           L  +  ++V CG   T  L+  G++Y  G+ +         DV+ +P  ++G   +S V 
Sbjct: 519 LDTTSFQQVACGQSITVALSMSGQVYAMGTADPS-----QDDVVRAPSCIEGGLGKSFVQ 573

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
           +V+CG+ H A + S+ ++ TWG G            S GQLGHG+      PT+V   + 
Sbjct: 574 EVACGYHHIAVLNSKAEVYTWGKG------------SNGQLGHGDTEYRRMPTLVKALKG 621

Query: 404 VKALQVSCGFNHTGAL 419
            +  +V CG N+T  +
Sbjct: 622 KQVRKVVCGSNYTATI 637



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 118/266 (44%), Gaps = 35/266 (13%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++    +  +  + G   +V VT  G++ SWG    GRLGHG  S +         
Sbjct: 294 LPKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPH------- 346

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
             P+LI E +G  V++A  G  H+  +  +G +Y +GD   +  L   G+ A     +  
Sbjct: 347 --PKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRI 404

Query: 287 LPYSE-----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           L   E      + CG +HT  +TS G+L+T+G    G LG G     + P  V+   +  
Sbjct: 405 LGQMEGINVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHGDRISTNIPREVEA-LNGC 463

Query: 342 PVDQVSCGWKHTAAI--------SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
              + +CG  H+AA+        S GK+ TWG G              G+LGHG+    +
Sbjct: 464 RTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDG------------DDGKLGHGDIASRL 511

Query: 394 HPTIVNFGENVKALQVSCGFNHTGAL 419
            P  V   +     QV+CG + T AL
Sbjct: 512 IPLSVTELDTTSFQQVACGQSITVAL 537



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 108/229 (47%), Gaps = 18/229 (7%)

Query: 198 VLSWGAG-GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           V  WG   G G LG G   S       T  + P+++K    +  +  + G  ++  + + 
Sbjct: 263 VFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQ 322

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS 314
           G++Y +G+ +  ++     ++   P LI +   S  E   CG +HTC +T+ G+LY WG 
Sbjct: 323 GQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDLYAWGD 382

Query: 315 NEN--GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
            ++  G LG+GS      P R+ G      V  +SCG  HTA + S GK+ T+G     G
Sbjct: 383 GDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG----DG 438

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           TF        G LGHG+ +    P  V      + ++ +CG  H+ A++
Sbjct: 439 TF--------GALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVV 479


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 163/325 (50%), Gaps = 31/325 (9%)

Query: 44   GNGDYGRLGLGSLES--RWRPVVCSAFEKHSLKALACGGA---HTLFLTETGCVYATGLN 98
            G G YGRLG G+ +   R RP+  +A +   +  LA       H+L LTETG V++ G  
Sbjct: 3462 GEGSYGRLGQGNSDDLPRLRPI--TALQGFVVTELATSTGLEGHSLALTETGEVFSWGDG 3519

Query: 99   DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            D+G+LG   N      P +I  L+ ++V+ ++ G+ HS+ +TVDG+L+ +G +  G+LGL
Sbjct: 3520 DYGKLG-HGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGL 3578

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESS 216
            G  + K   +P +V  L  I  +  A G   +V VT   + V ++G G  G+LG G    
Sbjct: 3579 GNTSNK--KLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG---- 3632

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 R+T++ TP+ +     + +K    G   +  + + G+VY  G    + +   +  
Sbjct: 3633 -----RTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQ 3687

Query: 277  HARR-PSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP-- 331
            HA   P  +  L   + E++  G  H   LT  G++++WG++ +G LG+G       P  
Sbjct: 3688 HADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCL 3747

Query: 332  -ERVQGPFSESPVDQVSCGWKHTAA 355
               +QG      + Q+S G  H+AA
Sbjct: 3748 ISSLQG----KGIRQISAGHNHSAA 3768



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 180/392 (45%), Gaps = 45/392 (11%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            A  WG G +G+L   S     +P + S+F K   K + CG   T  +   G V A G   
Sbjct: 3409 AYTWGGGRHGQLA-ESGRLVLQPTLTSSFSKA--KQIHCGHNSTFVIEHDGTVLACGEGS 3465

Query: 100  FGQLGISENIGYSLEPLR-ISGLKKEVVQ---ISTGYH-HSSAITVDGELYMWGKNSNGQ 154
            +G+LG  +     L  LR I+ L+  VV     STG   HS A+T  GE++ WG    G+
Sbjct: 3466 YGRLG--QGNSDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGK 3523

Query: 155  LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
            LG G    +    P ++E L G      A G + S  VT  GK+ ++GA   GRLG G  
Sbjct: 3524 LGHGNSERQ--RRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNT 3581

Query: 215  SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKMLFQ 273
            S+         +  P  +  L+ + V++ A G  H+  +  +   V+ FG+    ++   
Sbjct: 3582 SN---------KKLPAQVTALQPIMVELIACGANHTVVVTTDRESVWTFGEGEYGQLGLG 3632

Query: 274  EGNHARRPSLI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                   P  +   SKL   +++ CG   T  LT  G++Y+ G N   C GI  +D  H+
Sbjct: 3633 RTTAKMTPQYVDAFSKLNI-KKICCGARFTLALTKEGKVYSCGHNR--CNGIFEVDTQHA 3689

Query: 331  ---PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
               P++V    SE  ++ ++ G++H  A++ EG +  W WG          + + GQLG 
Sbjct: 3690 DYYPQQVMA-LSEQFIEDIAAGYEHALALTKEGDV--WSWG----------NDTDGQLGL 3736

Query: 387  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            G  +    P +++  +     Q+S G NH+ A
Sbjct: 3737 GQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 33/323 (10%)

Query: 46  GDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDFGQ 102
           G+YGRLGLG   ++ RP +     +  +K L        HTL +   G +Y+ G  D+G+
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGK 500

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   ++      L +  ++ +VV QI+ GY HS+AIT +G LY WG    G+LG G   
Sbjct: 501 LGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNH 560

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           ++   IPT V+ ++G+ +      F   ++      V S+GAG +G+LGHG  S +    
Sbjct: 561 SR--SIPTLVKDITGVGSVSCGSSFTVVIS-QDATTVWSFGAGDNGKLGHGDTSRV---- 613

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI--------FGDRAVDKMLFQ 273
                Y P++I  L+G+ ++        S  +   G+V++        +G      ++ +
Sbjct: 614 -----YRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATFLVPK 668

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VLHSPE 332
             +  +   +I       ++  G  H   LT   ++Y+WG+N +G  G+G+ +  +  P 
Sbjct: 669 RLDEFQDLQII-------DIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPR 721

Query: 333 RVQGPFSESPVDQVSCGWKHTAA 355
           +V G F    + Q+S G  H+ A
Sbjct: 722 KVTG-FDNHVIYQISVGTSHSIA 743



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 141/325 (43%), Gaps = 35/325 (10%)

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QL  S      L P ++  + +E+++  T       ++   E Y WG   +GQL    ++
Sbjct: 3368 QLITSTKENEILPPWKL-AMDREIIEWVTDRPQDWKMSAKCEAYTWGGGRHGQLA---ES 3423

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +++  PT     S    KQ   G   +  +   G VL+ G G  GRLG G         
Sbjct: 3424 GRLVLQPTLTSSFSK--AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGN-------- 3473

Query: 222  RSTSEYTPRL--IKELEG-VKVKIAAAGFL--HSACIDENGRVYIFGDRAVDKMLFQEGN 276
               S+  PRL  I  L+G V  ++A +  L  HS  + E G V+ +GD    K+      
Sbjct: 3474 ---SDDLPRLRPITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSE 3530

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              RRP  I  L   +   V CG  H+ ++T  G+L+T+G+++ G LG+G+      P +V
Sbjct: 3531 RQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQV 3590

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                    V+ ++CG  HT  ++  +   W +G   G +        GQLG G     + 
Sbjct: 3591 TA-LQPIMVELIACGANHTVVVTTDRESVWTFG--EGEY--------GQLGLGRTTAKMT 3639

Query: 395  PTIVNFGENVKALQVSCGFNHTGAL 419
            P  V+    +   ++ CG   T AL
Sbjct: 3640 PQYVDAFSKLNIKKICCGARFTLAL 3664



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 34   TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
            T  R     +G G+YG+LGLG   ++  P    AF K ++K + CG   TL LT+ G VY
Sbjct: 3612 TTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVY 3671

Query: 94   ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSN 152
            + G N    +   +       P ++  L ++ ++ I+ GY H+ A+T +G+++ WG +++
Sbjct: 3672 SCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTD 3731

Query: 153  GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            GQLGLG+   +    P  +  L G   +Q + G   S A T         A  S R    
Sbjct: 3732 GQLGLGQTLPQ--REPCLISSLQGKGIRQISAGHNHSAAWT--------VAPASIRKAMA 3781

Query: 213  QESSI-LGFLRSTSEYTPRLIKELEGVKVKI 242
              SS+ LG      E  P +   L G+ +++
Sbjct: 3782 TSSSLELGL----PERIPEIYGSLAGIDIQL 3808



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 142/316 (44%), Gaps = 65/316 (20%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP--IPTKVECLSGIF-----------TKQAALGFE 187
           +  +Y+WG NS+ QLG+ +    +IP   P+      G +            +   + FE
Sbjct: 404 ESHVYVWGSNSSYQLGISEPEKMLIPHLTPSFANSEQGNYGRLGLGDSSNQNRPKLIRFE 463

Query: 188 Q----------------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
                            ++A+   G++ SWG G  G+LGHG            ++ +P+L
Sbjct: 464 HECKIKNLVSSKGSDGHTLAIASDGRIYSWGDGDYGKLGHGNH---------VTQKSPKL 514

Query: 232 IK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPY 289
           I   ++G  V+  A G+ HSA I   G +Y +GD    + L    NH+R  P+L+  +  
Sbjct: 515 ILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGR-LGHGDNHSRSIPTLVKDITG 573

Query: 290 SEEVVCGGYHTCVLTSGG-ELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQ 345
              V CG   T V++     ++++G+ +NG LG G    ++ P+    +QG      + +
Sbjct: 574 VGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGHGDTSRVYRPKVISNLQGLL----IRK 629

Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGEN 403
           V C  + + A++  G++  WG              SG  LG+G  D  ++ P  ++  ++
Sbjct: 630 VCCASQSSLALTSIGQVFVWG--------------SGPCLGYGQADATFLVPKRLDEFQD 675

Query: 404 VKALQVSCGFNHTGAL 419
           ++ + ++ G NH  AL
Sbjct: 676 LQIIDIAVGDNHCLAL 691



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 22/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   ++ +A G  H+  +T  G +Y  G  D+G
Sbjct: 493 WGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYG 552

Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDG-ELYMWGKNSNGQLGL 157
           +LG  +N   S     I  L K++     +S G   +  I+ D   ++ +G   NG+LG 
Sbjct: 553 RLGHGDNHSRS-----IPTLVKDITGVGSVSCGSSFTVVISQDATTVWSFGAGDNGKLGH 607

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G  +   +  P  +  L G+  ++     + S+A+T  G+V  WG+G    LG+GQ  + 
Sbjct: 608 GDTSR--VYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC--LGYGQADA- 662

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
             FL       P+ + E + +++   A G  H   +  +  VY +G+ A
Sbjct: 663 -TFL------VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNA 704



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     +RP V S  +   ++ + C    +L LT  G V+  G      
Sbjct: 597 FGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPC-- 654

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +     L P R+   +  +++ I+ G +H  A+T D ++Y WG N++GQ GLG   
Sbjct: 655 LGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNN 714

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           + V+ +P KV         Q ++G   S+A T 
Sbjct: 715 SPVL-LPRKVTGFDNHVIYQISVGTSHSIAWTA 746



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 9/214 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG+GDYGRLG G   SR  P +        + +++CG + T+ +++    V++ G  D G
Sbjct: 546 WGDGDYGRLGHGDNHSRSIPTLVKDIT--GVGSVSCGSSFTVVISQDATTVWSFGAGDNG 603

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +       P  IS L+  ++ ++      S A+T  G++++WG  S   LG G+ 
Sbjct: 604 KLGHGDT-SRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWG--SGPCLGYGQA 660

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  + +P +++    +     A+G    +A+T    V SWG   SG+ G G  +S +  
Sbjct: 661 DATFL-VPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNNNSPVLL 719

Query: 221 LRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACI 253
            R  + +   +I ++  G    IA        CI
Sbjct: 720 PRKVTGFDNHVIYQISVGTSHSIAWTALPTDRCI 753



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 71/142 (50%), Gaps = 4/142 (2%)

Query: 2    LGRSLTAMTKYYLKQDIKLGSKLGIC--KRWISSTLQRRFAALWGNGDYGRLGLGSLESR 59
            LGR+   MT  Y+    KL  K   C  +  ++ T + +  +   N   G   + +  + 
Sbjct: 3631 LGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNGIFEVDTQHAD 3690

Query: 60   WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
            + P    A  +  ++ +A G  H L LT+ G V++ G +  GQLG+ + +    EP  IS
Sbjct: 3691 YYPQQVMALSEQFIEDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQR-EPCLIS 3749

Query: 120  GLK-KEVVQISTGYHHSSAITV 140
             L+ K + QIS G++HS+A TV
Sbjct: 3750 SLQGKGIRQISAGHNHSAAWTV 3771


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 169/368 (45%), Gaps = 47/368 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           ++ ++CG  H + +T+ G  ++ G    G+LG       S  P  I   K   V+ I+ G
Sbjct: 310 VQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVS-HPKLIKNFKGMNVELIACG 368

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC--LSGIFTKQAALGFEQS 189
            +HS A+T  G+LY WG  +     LG ++     IP KV C  + G+     + G   +
Sbjct: 369 EYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKV-CGLMEGLRVSHVSCGPWHT 427

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG  S  +         TPR ++   G+K    A G  H
Sbjct: 428 ALITSAGRLFTFGDGTFGALGHGDRSGCI---------TPREVETFNGLKTLKVACGVWH 478

Query: 250 SACIDE-------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--E 292
           +A + E             +G ++ +GD   DK     G++  R  P  I+ L      E
Sbjct: 479 TAAVVELMSGLDSRPSDAPSGTLFTWGDG--DKGKLGHGDNKPRLAPQCITALVDKSFSE 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V C    T  LT+ G +YT GSN  G LG    + + SP  V+    +S V+++SCG  H
Sbjct: 537 VACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGM-SPICVEDYLVDSTVEEISCGSHH 595

Query: 353 TAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            A + S  ++ TWG G              GQLGHG+  +   PT+V+   + +  ++ C
Sbjct: 596 VAVLTSRTEVYTWGKG------------ENGQLGHGDCENKCTPTLVDILRDKQVKRIVC 643

Query: 412 GFNHTGAL 419
           G N + A+
Sbjct: 644 GSNFSAAI 651



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 144/333 (43%), Gaps = 32/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G+      P +   F+  +++ +ACG  H+  +T +G +Y    G    
Sbjct: 332 WGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSS 391

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P ++ GL +   V  +S G  H++ IT  G L+ +G  + G LG G
Sbjct: 392 GLLGHRSEASHWI-PKKVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHG 450

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-------------GGGKVLSWGAGG 205
            ++  + P   +VE  +G+ T + A G   + AV                G + +WG G 
Sbjct: 451 DRSGCITP--REVETFNGLKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGD 508

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGHG     L          P+ I  L        A  +  +  +   GRVY  G  
Sbjct: 509 KGKLGHGDNKPRLA---------PQCITALVDKSFSEVACSYAMTVALTTTGRVYTMGSN 559

Query: 266 AVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++     N      +   L  S  EE+ CG +H  VLTS  E+YTWG  ENG LG G
Sbjct: 560 VYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAVLTSRTEVYTWGKGENGQLGHG 619

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             +   +P  V     +  V ++ CG   +AAI
Sbjct: 620 DCENKCTPTLVD-ILRDKQVKRIVCGSNFSAAI 651



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 121/272 (44%), Gaps = 43/272 (15%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E    +  +  + G   ++ VT  G+  SWG    GRLGHG E+ +          
Sbjct: 299 PKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDV---------S 349

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNH---ARRP 281
            P+LIK  +G+ V++ A G  HS  +  +G +Y +GD A    L     E +H    +  
Sbjct: 350 HPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVC 409

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L+  L  S  V CG +HT ++TS G L+T+G    G LG G      +P  V+  F+  
Sbjct: 410 GLMEGLRVS-HVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVET-FNGL 467

Query: 342 PVDQVSCGWKHTAAISE--------------GKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              +V+CG  HTAA+ E              G + TWG G              G+LGHG
Sbjct: 468 KTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDK------------GKLGHG 515

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++   + P  +    +    +V+C +  T AL
Sbjct: 516 DNKPRLAPQCITALVDKSFSEVACSYAMTVAL 547



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 97/201 (48%), Gaps = 17/201 (8%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V+  + G  H+  + + G  + +G+ A  ++          P LI   
Sbjct: 298 TPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNF 357

Query: 288 P--YSEEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPV 343
                E + CG YH+C +TS G+LYTWG  +  +G LG  S      P++V G      V
Sbjct: 358 KGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPKKVCGLMEGLRV 417

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             VSCG  HTA I S G++ T+G     GTF        G LGHG+    I P  V    
Sbjct: 418 SHVSCGPWHTALITSAGRLFTFG----DGTF--------GALGHGDRSGCITPREVETFN 465

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            +K L+V+CG  HT A++E +
Sbjct: 466 GLKTLKVACGVWHTAAVVELM 486


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GNPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGNPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
 gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
           DW4/3-1]
          Length = 864

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 192/401 (47%), Gaps = 52/401 (12%)

Query: 6   LTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC 65
           ++A++    +Q +  GS   +  R   + L       WG  + G+LG GS ++R  PV  
Sbjct: 56  ISALSLSNTQQGVSAGSYHSLLLRSTGAVL------AWGQNNSGQLGDGSTQNRTLPV-- 107

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---------SENIGYSLEPL 116
           +     S+KA++ GG+++L +   G V+A G N+ GQLG          SE   + + P+
Sbjct: 108 NVLGLPSIKAISAGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPV 167

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
            I  +      +S G +HS A+  DG+L+ WG N+ GQLG G  A ++ P+   +    G
Sbjct: 168 SIV-IPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANRLAPVSVNIP--GG 224

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                 A G+  S+A+   G+V +WG   SG++G+G  ++ L         TP ++    
Sbjct: 225 AIA--IAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQL---------TPVVVA-FP 272

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV 294
           G  + +A  G  HS  +  NG V+ +G  A +     +G++A R  P  +  +  + +V 
Sbjct: 273 GSAIAVAGGGS-HSLVVLSNGTVWSWG--ANNAGQLGDGSNATRVSPIQVPGIGVATKVA 329

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            GGY +  +TS G +++WG N  G LG GS+     P  +    + S    +S G+ H+ 
Sbjct: 330 AGGYFSLAITSDG-VWSWGQNTRGQLGNGSLANSSVPVFIT---ATSNALALSGGYHHSL 385

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
            +  G  + W W          G ++ GQLG G  VD + P
Sbjct: 386 ILRPGCPI-WAW----------GFNAYGQLGDGTLVDRLAP 415



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 38/354 (10%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
            ++ + ++ G  H+L L  TG V A G N+ GQLG       +L P+ + GL   +  IS
Sbjct: 62  SNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTL-PVNVLGLPS-IKAIS 119

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLG---LGKKAAKVIPIPTKVECLSGIFTKQAAL-- 184
            G  +S A+  DG+++ WG N++GQLG   LG   +       +V  +S +    AA   
Sbjct: 120 AGGSYSLAVGADGKVWAWGANNSGQLGTGYLGNGKSGSEYADFQVTPVSIVIPGGAAAVS 179

Query: 185 -GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S+A+   GK+ +WGA   G+LG G          +T+     +   + G  + IA
Sbjct: 180 GGLNHSLALAKDGKLWAWGANTYGQLGDG----------TTANRLAPVSVNIPGGAIAIA 229

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG-YHTCV 302
           A G+ HS  I  +GRV+ +G R     +   G   +   ++   P S   V GG  H+ V
Sbjct: 230 A-GWYHSLAIARDGRVWAWG-RNNSGQVGNGGTANQLTPVVVAFPGSAIAVAGGGSHSLV 287

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           + S G +++WG+N  G LG GS     SP +V G    +   +V+ G   + AI+   + 
Sbjct: 288 VLSNGTVWSWGANNAGQLGDGSNATRVSPIQVPGIGVAT---KVAAGGYFSLAITSDGVW 344

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           +W            G ++ GQLG+G+  +   P  +    N  AL +S G++H+
Sbjct: 345 SW------------GQNTRGQLGNGSLANSSVPVFITATSN--ALALSGGYHHS 384



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 133/290 (45%), Gaps = 33/290 (11%)

Query: 117 RISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            IS L     Q  +S G +HS  +   G +  WG+N++GQLG G    + +P+   V  L
Sbjct: 55  EISALSLSNTQQGVSAGSYHSLLLRSTGAVLAWGQNNSGQLGDGSTQNRTLPV--NVLGL 112

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
             I  K  + G   S+AV   GKV +WGA  SG+LG G     LG  +S SEY    +  
Sbjct: 113 PSI--KAISAGGSYSLAVGADGKVWAWGANNSGQLGTG----YLGNGKSGSEYADFQVTP 166

Query: 235 LEGVKVKIAAA---GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYS 290
           +  V    AAA   G  HS  + ++G+++ +G     ++   +G  A R + +S  +P  
Sbjct: 167 VSIVIPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQL--GDGTTANRLAPVSVNIPGG 224

Query: 291 EEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              +  G YH+  +   G ++ WG N +G +G G      +P  V  P S      V+ G
Sbjct: 225 AIAIAAGWYHSLAIARDGRVWAWGRNNSGQVGNGGTANQLTPVVVAFPGSAI---AVAGG 281

Query: 350 WKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             H+   +S G + +W            G ++ GQLG G++   + P  V
Sbjct: 282 GSHSLVVLSNGTVWSW------------GANNAGQLGDGSNATRVSPIQV 319



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 5/129 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG GS  +R  P+        +   +A GG  +L +T  G V++ G N  GQ
Sbjct: 297 WGANNAGQLGDGSNATRVSPIQVPGIGVAT--KVAAGGYFSLAITSDG-VWSWGQNTRGQ 353

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + ++  S  P+ I+     +  +S GYHHS  +     ++ WG N+ GQLG G    
Sbjct: 354 LG-NGSLANSSVPVFITATSNALA-LSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVD 411

Query: 163 KVIPIPTKV 171
           ++ P+  ++
Sbjct: 412 RLAPVQAEI 420


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 160/321 (49%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVSNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+       P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFE----TSEPKVIENIRDQTISYISCGENHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           +T  G +YT+G   +G LG+G
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLG 330



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|163847891|ref|YP_001635935.1| chromosome condensation regulator RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222525767|ref|YP_002570238.1| chromosome condensation regulator RCC1 [Chloroflexus sp. Y-400-fl]
 gi|163669180|gb|ABY35546.1| regulator of chromosome condensation RCC1 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449646|gb|ACM53912.1| regulator of chromosome condensation RCC1 [Chloroflexus sp.
           Y-400-fl]
          Length = 790

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 176/384 (45%), Gaps = 40/384 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  PV  +  E   + A+A G  HT  LT +G V   G N  GQ
Sbjct: 193 WGDNSSGQLGDGTTNDRNTPVDVAGLES-GVAAIAAGEGHTCALTTSGGVKCWGDNLEGQ 251

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I   + P+ ++GL+ +V  I+ G+ H+ A+T  G +  WG NS+GQLG G    
Sbjct: 252 LG-GGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTMTE 310

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+   +   SG+    A  G   + A+T GG V  WG    G+LG+           
Sbjct: 311 RNVPVGV-IGLESGVTAITAGGG--HTCALTTGGGVKCWGNNFYGQLGN----------- 356

Query: 223 STSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             + + P +  ++ G+ + +   AAG  H+  +  +G V  +G      +   +G    R
Sbjct: 357 -VTAHQPGIPVDVAGLGIGVVAIAAGGAHTCALTTSGGVKCWGYNY--DVQLGDGTTTAR 413

Query: 281 PSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +       +VV    GG HTC LT+ G +  WG N N  LG G++   ++P  V G 
Sbjct: 414 STPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMIDRNTPVDVIGL 473

Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
            S   V  ++ G  HT A++    +  W            G +  GQLGHG    Y  P 
Sbjct: 474 GSR--VTAITAGGNHTCALTTSDGVKCW------------GSNLYGQLGHGTMNFYGTPV 519

Query: 397 IVNFGENVKALQVSCGFNHTGALL 420
            V  G N     ++ G+ HT AL+
Sbjct: 520 DV-IGLNGDVTAIAAGWWHTCALM 542



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 176/428 (41%), Gaps = 79/428 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G++  R  PV     E   + A+A GG+HT  LT  G V   G N  GQ
Sbjct: 91  WGDNSSGQLGDGTMNDRNTPVDVVGLES-GVAAIAAGGSHTCALTTNGGVKCWGANVSGQ 149

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I YS  P+ +  L + V  I+ G+ H+ A+T  G +  WG NS+GQLG G    
Sbjct: 150 LGNETQIPYS-APVDVVELGRGVFDITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTND 208

Query: 163 KVIPIPTK------------------------VEC----------------------LSG 176
           +  P+                           V+C                      ++G
Sbjct: 209 RNTPVDVAGLESGVAAIAAGEGHTCALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAG 268

Query: 177 IFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           + +  AA+  G+E + A+T  G V  WG   SG+LG G           T    P  +  
Sbjct: 269 LESDVAAIAVGWEHTCALTTVGGVRCWGNNSSGQLGDGTM---------TERNVPVGVIG 319

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEV 293
           LE     I A G  H+  +   G V  +G+    ++     +    P  ++ L      +
Sbjct: 320 LESGVTAITAGGG-HTCALTTGGGVKCWGNNFYGQLGNVTAHQPGIPVDVAGLGIGVVAI 378

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             GG HTC LT+ G +  WG N +  LG G+     +P  V G   ES V  ++ G  HT
Sbjct: 379 AAGGAHTCALTTSGGVKCWGYNYDVQLGDGTTTARSTPVDVSG--LESDVVTITAGGAHT 436

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSC 411
            A+ + G +  W            G +   QLG G  +D   P  ++  G  V A  ++ 
Sbjct: 437 CALTTSGGVKCW------------GRNFNFQLGDGTMIDRNTPVDVIGLGSRVTA--ITA 482

Query: 412 GFNHTGAL 419
           G NHT AL
Sbjct: 483 GGNHTCAL 490



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 172/382 (45%), Gaps = 37/382 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN  YG+LG  +      PV  +      + A+A GGAHT  LT +G V   G N   Q
Sbjct: 346 WGNNFYGQLGNVTAHQPGIPVDVAGLGI-GVVAIAAGGAHTCALTTSGGVKCWGYNYDVQ 404

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +SGL+ +VV I+ G  H+ A+T  G +  WG+N N QLG G    
Sbjct: 405 LGDGTTTARS-TPVDVSGLESDVVTITAGGAHTCALTTSGGVKCWGRNFNFQLGDGTMID 463

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +  P+      + G+ ++  A+  G   + A+T    V  WG+   G+LGHG     + F
Sbjct: 464 RNTPVD-----VIGLGSRVTAITAGGNHTCALTTSDGVKCWGSNLYGQLGHGT----MNF 514

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                  TP  +  L G  V   AAG+ H+  +  +G V  +G  A D     +G  + R
Sbjct: 515 YG-----TPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWG--ANDSGQLGDGTRSDR 566

Query: 281 --PSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             P  +S L      +  G +HTC LT+ G +  WGSN +  LG  ++   + P  V G 
Sbjct: 567 SIPVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQPYIPVDVFGL 626

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
           +S   V  ++ G  HT A++ G      WGG++           GQLG G       P  
Sbjct: 627 WSG--VTAITAGLHHTCALTTGSAQVQCWGGNY----------DGQLGDGTTNLRRFPQT 674

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V  G       ++ G  HT AL
Sbjct: 675 V-IGLEGSETAIAAGGAHTCAL 695



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 150/329 (45%), Gaps = 26/329 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG     +LG G++  R  PV         + A+  GG HT  LT +  V   G N +GQ
Sbjct: 448 WGRNFNFQLGDGTMIDRNTPVDVIGLGSR-VTAITAGGNHTCALTTSDGVKCWGSNLYGQ 506

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + +   P+ + GL  +V  I+ G+ H+ A+  DG +  WG N +GQLG G ++ 
Sbjct: 507 LG-HGTMNFYGTPVDVIGLNGDVTAIAAGWWHTCALMTDGGVKCWGANDSGQLGDGTRSD 565

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           + IP+      +SG+ +  AA+  G   + A+T  G V  WG+  S +LG+         
Sbjct: 566 RSIPVD-----VSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGN--------- 611

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG--RVYIFGDRAVDKMLFQEGNHA 278
           +     Y P  +  L      I A   LH  C    G  +V  +G     ++     N  
Sbjct: 612 ITVGQPYIPVDVFGLWSGVTAITAG--LHHTCALTTGSAQVQCWGGNYDGQLGDGTTNLR 669

Query: 279 RRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           R P  +  L  SE  +  GG HTC LT  G +  WG N  G LG GS+    +P  V   
Sbjct: 670 RFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI-- 727

Query: 338 FSESPVDQVSCGWKHTAAISEGK-ILTWG 365
             ES VD ++ G+ HT A++  K +  WG
Sbjct: 728 RLESNVDAIAAGFFHTCALTTDKGVKCWG 756



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 138/297 (46%), Gaps = 18/297 (6%)

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST 130
            ++ A+A G  HT  LT  G V   G N  GQLG    +     P+ + GL+  V  I+ 
Sbjct: 67  RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLG-DGTMNDRNTPVDVVGLESGVAAIAA 125

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G  H+ A+T +G +  WG N +GQLG   +     P+   VE   G+F   A  G+E + 
Sbjct: 126 GGSHTCALTTNGGVKCWGANVSGQLGNETQIPYSAPVDV-VELGRGVFDITA--GWEHTC 182

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T GG V  WG   SG+LG G          +    TP  +  LE   V   AAG  H+
Sbjct: 183 ALTTGGGVKCWGDNSSGQLGDGT---------TNDRNTPVDVAGLES-GVAAIAAGEGHT 232

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGEL 309
             +  +G V  +GD    ++          P  ++ L      +  G+ HTC LT+ G +
Sbjct: 233 CALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAGLESDVAAIAVGWEHTCALTTVGGV 292

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             WG+N +G LG G++   + P  V G   ES V  ++ G  HT A++  G +  WG
Sbjct: 293 RCWGNNSSGQLGDGTMTERNVPVGVIG--LESGVTAITAGGGHTCALTTGGGVKCWG 347



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 135/299 (45%), Gaps = 30/299 (10%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           + +  I+TG +H+ A+T  G +  WG NS+GQLG G    +  P+   V   SG+     
Sbjct: 67  RNITAIATGRYHTCALTTGGGVKCWGDNSSGQLGDGTMNDRNTPVDV-VGLESGV--AAI 123

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G   + A+T  G V  WGA  SG+LG+  E+ I           P  + EL G  V  
Sbjct: 124 AAGGSHTCALTTNGGVKCWGANVSGQLGN--ETQI-------PYSAPVDVVEL-GRGVFD 173

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTC 301
             AG+ H+  +   G V  +GD +  ++     N    P  ++ L      +  G  HTC
Sbjct: 174 ITAGWEHTCALTTGGGVKCWGDNSSGQLGDGTTNDRNTPVDVAGLESGVAAIAAGEGHTC 233

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
            LT+ G +  WG N  G LG G+I    +P  V G   ES V  ++ GW+HT A++  G 
Sbjct: 234 ALTTSGGVKCWGDNLEGQLGGGTIYSHITPVDVAG--LESDVAAIAVGWEHTCALTTVGG 291

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +  W            G++S GQLG G   +   P  V  G       ++ G  HT AL
Sbjct: 292 VRCW------------GNNSSGQLGDGTMTERNVPVGV-IGLESGVTAITAGGGHTCAL 337



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 21/285 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G++     PV         + A+A G  HT  L   G V   G ND GQ
Sbjct: 499 WGSNLYGQLGHGTMNFYGTPVDVIGLNG-DVTAIAAGWWHTCALMTDGGVKCWGANDSGQ 557

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P+ +SGL   V  I+ G  H+ A+T  G +  WG NS+ QLG      
Sbjct: 558 LGDGTRSDRSI-PVDVSGLGSGVAAITAGLFHTCALTTSGGVKCWGSNSSWQLGNITVGQ 616

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVT-GGGKVLSWGAGGSGRLGHGQESSILG 219
             IP+      + G+++   A+  G   + A+T G  +V  WG    G+LG G  +    
Sbjct: 617 PYIPVD-----VFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN---- 667

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            LR      P+ +  LEG +  IAA G  H+  +  +G +  +GD    ++     +   
Sbjct: 668 -LRRF----PQTVIGLEGSETAIAAGG-AHTCALTVSGGMKCWGDNFYGQLGDGSMHDRS 721

Query: 280 RPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTWGSNENGCLGIG 323
            P  + +L  + + +  G+ HTC LT+   +  WG N    LG G
Sbjct: 722 TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDG 766



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 62/125 (49%), Gaps = 2/125 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      E  S  A+A GGAHT  LT +G +   G N +GQ
Sbjct: 653 WGGNYDGQLGDGTTNLRRFPQTVIGLEG-SETAIAAGGAHTCALTVSGGMKCWGDNFYGQ 711

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P+ +  L+  V  I+ G+ H+ A+T D  +  WG N   QLG G+   
Sbjct: 712 LGDGSMHDRS-TPVDVIRLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGRPLW 770

Query: 163 KVIPI 167
           + +P+
Sbjct: 771 RSVPV 775



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 81/220 (36%), Gaps = 51/220 (23%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+   R  PV  S      + A+  G  HT  LT +G V   G N   Q
Sbjct: 550 WGANDSGQLGDGTRSDRSIPVDVSGLGS-GVAAITAGLFHTCALTTSGGVKCWGSNSSWQ 608

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKKA 161
           LG +  +G    P+ + GL   V  I+ G HH+ A+T    ++  WG N +GQLG G   
Sbjct: 609 LG-NITVGQPYIPVDVFGLWSGVTAITAGLHHTCALTTGSAQVQCWGGNYDGQLGDGTTN 667

Query: 162 AKVIP------------------------IPTKVECLSGIFTKQ---------------- 181
            +  P                        +   ++C    F  Q                
Sbjct: 668 LRRFPQTVIGLEGSETAIAAGGAHTCALTVSGGMKCWGDNFYGQLGDGSMHDRSTPVDVI 727

Query: 182 --------AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
                    A GF  + A+T    V  WG     +LG G+
Sbjct: 728 RLESNVDAIAAGFFHTCALTTDKGVKCWGDNFYAQLGDGR 767


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 89  TGCVYATGLNDFGQLGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           +G +Y+ G N +G+LG  ++I  + L  + + G   ++ Q+++G    + +T DG +   
Sbjct: 320 SGELYSCGQNSYGELGTGDDIERHQLTSISLCGWD-DIRQVASGNETLAVLTNDGVVLTC 378

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAALGFEQSVAVTGGGKVLSWGAGG 205
           G N +GQ G G    +V+ +   V+ L     K   A+ G E  +A+T  G   SWG   
Sbjct: 379 GLNKSGQCGQGHFDERVMML-RPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYND 437

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LGH           +T  + P+LI+ L+  K++ A+  + HSA I ++G +Y FG  
Sbjct: 438 RGQLGHEN--------LTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMN 489

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              ++      H   P L+     +E   V CG YHT + T+ G L+  G N+ G LG+G
Sbjct: 490 DCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLG 549

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
               +     V  P     V  V+ G+ H+  ++           S  TFS  G +  GQ
Sbjct: 550 HNRQIKVASLVSLP--NEMVSYVASGYYHSVVVT----------NSGRTFSF-GRNDYGQ 596

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           LG GN V    P +V    N + ++ +CG  HT  L E
Sbjct: 597 LGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSE 634



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 169/390 (43%), Gaps = 39/390 (10%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G   YG LG G    R +    S      ++ +A G      LT  G V   GLN  GQ 
Sbjct: 327 GQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLTCGLNKSGQC 386

Query: 104 G---ISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G     E +   L P++ +   + + +  S G  H  A+T  G  Y WG N  GQLG   
Sbjct: 387 GQGHFDERV-MMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHEN 445

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG--HGQESSI 217
              KV  +P  +E L     + A++ +  S  +T  G++ ++G    G+LG  H Q  S 
Sbjct: 446 LTTKV-HVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQS- 503

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                     TP+L+K  EG ++ + A G  H+      G ++  G     ++       
Sbjct: 504 ----------TPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQ 553

Query: 278 ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            +  SL+S LP      V  G YH+ V+T+ G  +++G N+ G LGIG+  V  +   V 
Sbjct: 554 IKVASLVS-LPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGN-KVHQNVPNVV 611

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
              + + + + +CG  HT  +SE G++  +            G ++ GQLG+    D + 
Sbjct: 612 ALSANTRMVRATCGCYHTVLLSEQGQVFVF------------GRNNKGQLGNRGSADALL 659

Query: 395 PTIVNF---GENVKALQVSCGFNHTGALLE 421
           P  +       + + + V+ GF  T  ++E
Sbjct: 660 PVPLKVRPEKNSRRCVDVAAGFYTTSLIVE 689



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 146/321 (45%), Gaps = 22/321 (6%)

Query: 49  GRLGLGSLESR---WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G+ G G  + R    RPV     ++    A + G  H + LT++G  Y+ G ND GQLG 
Sbjct: 384 GQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLG- 442

Query: 106 SENIGYSLE-PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
            EN+   +  P  I  LK K++   S  YHHS+ IT  GELY +G N  GQLGL     +
Sbjct: 443 HENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQ 502

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P  V+   G      A G   ++  T  G + + G    G+LG G    I    + 
Sbjct: 503 --STPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQI----KV 556

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
            S      +  L    V   A+G+ HS  +  +GR + FG     ++      H   P++
Sbjct: 557 AS------LVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNV 610

Query: 284 ISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLG-IGSID-VLHSPERVQGPFS 339
           ++    +  V   CG YHT +L+  G+++ +G N  G LG  GS D +L  P +V+   +
Sbjct: 611 VALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 670

Query: 340 ESPVDQVSCGWKHTAAISEGK 360
                 V+ G+  T+ I E K
Sbjct: 671 SRRCVDVAAGFYTTSLIVERK 691



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 13/218 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G  D G+LGL   + +  P +   FE   +  +ACG  HT+  T TG ++A G ND+GQ
Sbjct: 486 FGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQ 545

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+  N    +  L +S   + V  +++GY+HS  +T  G  + +G+N  GQLG+G K  
Sbjct: 546 LGLGHNRQIKVASL-VSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVH 604

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGF- 220
           +   +P  V   +     +A  G   +V ++  G+V  +G    G+LG+ G   ++L   
Sbjct: 605 Q--NVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVP 662

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
           L+   E   R   ++        AAGF  ++ I E  R
Sbjct: 663 LKVRPEKNSRRCVDV--------AAGFYTTSLIVERKR 692


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 168/364 (46%), Gaps = 32/364 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  PL I  L+  VV QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHELP---TKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHA 278
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++ L  E N A
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEANRA 239

Query: 279 RRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+  
Sbjct: 240 -YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVM 297

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S + QV+CG +HT A+  S G++  +G G            S GQLG  +    + 
Sbjct: 298 ELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLML 345

Query: 395 PTIV 398
           P +V
Sbjct: 346 PQVV 349



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+ +LG   L ++ RP++    + + +  ++CG  H+L L+E G V + G ND GQL
Sbjct: 65  GSNDHSQLG-HELPTK-RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCGQL 122

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   K 
Sbjct: 123 GHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E+      
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEA------ 236

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 237 ---NRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 131/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   V   + G  HS  + E G+V  +
Sbjct: 66  SNDHSQLGHELPTK-----------RPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S  D+ H   P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 223 ----GRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACG 258



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 77/152 (50%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN++  LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSNDHSQLGHELPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE       +  V Q+SCG +H+ A+SE G++L+WG             +  GQLGH  
Sbjct: 84  IPE-----LQDYVVIQISCGSRHSLALSEWGQVLSWG------------DNDCGQLGHAT 126

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D + +  P +V    +   +Q++CG NH+ AL
Sbjct: 127 DKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 16/122 (13%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V QV+CG +HT  ++  GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGK 60

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           +   G          + HS   QLGH  ++    P ++   ++   +Q+SCG  H+ AL 
Sbjct: 61  VYACG---------SNDHS---QLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALS 106

Query: 421 EY 422
           E+
Sbjct: 107 EW 108


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 171/362 (47%), Gaps = 40/362 (11%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
           +++++ACG  H   +T+ G V++ G  + G+LG   +   S +P  I  L    V+ I+ 
Sbjct: 233 NVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVS-DPKIIDSLASTPVKTIAF 291

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLS-GIFTKQAALGFEQ 188
           G  ++ A++V GELY WG+  +  LG GK   +  P  P K+   S GI   + A G   
Sbjct: 292 GAKYTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWH 350

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  ++  GK+ ++G G  G LGHG   S++          P+ ++ L G + K  A G  
Sbjct: 351 TAIISSLGKLYTYGYGTFGVLGHGDTHSVVH---------PKEVESLRGSRAKSVACGPW 401

Query: 249 HSACIDEN----------GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
           H+A I E           G+++ +GD    K+          P+ +  L   +  +V CG
Sbjct: 402 HTAAIVETSGTLKSSAPGGKLFTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCG 461

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T VLT  G ++T GS E+G LG    D   S   V+GP     V  +SCG  H A +
Sbjct: 462 MSLTAVLTITGVVFTIGSKEHGQLGNSRSDNT-SICMVEGPLKTEFVKDISCGSSHVAVL 520

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           +  GK+ TWG G            + GQLG G+ VD   PT+V   E+ +   ++C  N 
Sbjct: 521 TMNGKVFTWGKG------------TEGQLGLGDYVDRSSPTLVEALEDKQVDSIACSSNF 568

Query: 416 TG 417
           T 
Sbjct: 569 TA 570



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 127/294 (43%), Gaps = 40/294 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++++WG         G   A  I +P  ++    +  +  A G + +  VT  G+V SWG
Sbjct: 198 DIFVWGDVLGRMSDHGHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWG 257

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
               GRLGH    S+           P++I  L    VK  A G  ++  +  +G +Y +
Sbjct: 258 EENGGRLGHKTSDSV---------SDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEW 308

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNE 316
           G+  +  + F +    R P    KL  + +      + CG +HT +++S G+LYT+G   
Sbjct: 309 GE-GIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGYGT 367

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------GKILTWG 365
            G LG G    +  P+ V+     S    V+CG  HTAAI E           GK+ TWG
Sbjct: 368 FGVLGHGDTHSVVHPKEVES-LRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWG 426

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G            GG+LGH N    + PT V    +    QVSCG + T  L
Sbjct: 427 DAG------------GGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVL 468



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 143/332 (43%), Gaps = 37/332 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG  + GRLG  + +S   P +  +     +K +A G  +T  ++ +G +Y    G++  
Sbjct: 256 WGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHSL 315

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G  G ++       P ++        V++I+ G  H++ I+  G+LY +G  + G LG G
Sbjct: 316 G-FGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGYGTFGVLGHG 374

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
              + V P   +VE L G   K  A G   + A+            GGK+ +WG  G G+
Sbjct: 375 DTHSVVHP--KEVESLRGSRAKSVACGPWHTAAIVETSGTLKSSAPGGKLFTWGDAGGGK 432

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH  + S L          P  ++ L        + G   +A +   G V+  G +   
Sbjct: 433 LGHTNKKSKL---------VPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHG 483

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     + I       K  + +++ CG  H  VLT  G+++TWG    G LG+
Sbjct: 484 QL----GNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGL 539

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G      SP  V+    +  VD ++C    TA
Sbjct: 540 GDYVDRSSPTLVEA-LEDKQVDSIACSSNFTA 570



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 102/209 (48%), Gaps = 19/209 (9%)

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           G + +T+   PRL+K  + + V+  A G  H+A + + G+V+ +G+    ++  +  +  
Sbjct: 213 GHVPATNISLPRLLKSSQILNVQSIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSV 272

Query: 279 RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P +I  L  +  + +  G  +TC ++  GELY WG   +  LG G      SP     
Sbjct: 273 SDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHS-LGFGKNQCQRSPWFPHK 331

Query: 337 PFSESP---VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
             S S    V +++CG  HTA IS  GK+ T+G+G    TF        G LGHG+    
Sbjct: 332 LISTSDGISVLKIACGQWHTAIISSLGKLYTYGYG----TF--------GVLGHGDTHSV 379

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
           +HP  V      +A  V+CG  HT A++E
Sbjct: 380 VHPKEVESLRGSRAKSVACGPWHTAAIVE 408


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 174/360 (48%), Gaps = 61/360 (16%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL--ACGG-AHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V SA +   +  L  +CG   H++ LTE+G V++ G  D+
Sbjct: 1177 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY 1236

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQI-----------------------STGYHHSS 136
            G+LG   N      P +I  L+ +EVVQ+                       S G+ HS+
Sbjct: 1237 GKLG-HGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSA 1295

Query: 137  AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVT 193
             +T DG+L+ +G    G+LGLG  + K   +P +V  L G    Q    A G   ++ V+
Sbjct: 1296 VVTADGKLFTFGNGDYGRLGLGNTSNK--KLPERVAALEGYQIGQVANVACGLNHTLVVS 1353

Query: 194  GGGKVL-SWGAGGSGRLGHGQESSILGFLRSTSEY------TPRLIKELE-----GVKVK 241
              G ++ ++G G  G+LG G  ++     +S+ +       +P L +EL+     G+ +K
Sbjct: 1354 ADGMMVWAFGDGDYGKLGLGNSTA-----KSSPQVWAVILQSPTLCQELKVDVLCGISIK 1408

Query: 242  IAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY 298
              A G   S  + ++GRV+ FG DR +     +  NH  RP  +  L   + ++V  G  
Sbjct: 1409 KVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNH-NRPQQLPALSGVHVQDVAVGAE 1467

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHTAA 355
            HT  L+S G++Y WGSN  G LG+G  + +  P  V   QG      + QVS G  H+AA
Sbjct: 1468 HTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKH----IHQVSAGRCHSAA 1523



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 139/306 (45%), Gaps = 53/306 (17%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFE-----------------------KHSLKALACG 79
            WG+GDYG+LG G+ + + RP    A +                        H    ++CG
Sbjct: 1231 WGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCG 1290

Query: 80   GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK----KEVVQISTGYHHS 135
              H+  +T  G ++  G  D+G+LG+       L P R++ L+     +V  ++ G +H+
Sbjct: 1291 FKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGQVANVACGLNHT 1349

Query: 136  SAITVDGEL-YMWGKNSNGQLGLGKKAAKVIP--------IPT-----KVECLSGIFTKQ 181
              ++ DG + + +G    G+LGLG   AK  P         PT     KV+ L GI  K+
Sbjct: 1350 LVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIKK 1409

Query: 182  AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
             A G + SVA+T  G+V ++   G  RL    ES      R+ +   P+ +  L GV V+
Sbjct: 1410 VACGTQFSVALTKDGRVFTF---GQDRLIGLPES------RARNHNRPQQLPALSGVHVQ 1460

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYH 299
              A G  H+  +   G VY +G  +  ++     NH R P++++ L   +  +V  G  H
Sbjct: 1461 DVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVSAGRCH 1520

Query: 300  TCVLTS 305
            +   T+
Sbjct: 1521 SAAWTA 1526



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 174/428 (40%), Gaps = 81/428 (18%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            LWG G +G+L      +   P    +F +   + + CG   T  +   G V A G   +G
Sbjct: 1126 LWGAGRHGQLAEAG-RNILVPTTAPSFSQA--QQVVCGQNCTFVIQPNGTVLACGEGSYG 1182

Query: 102  QLGISENIGYSLEPLRISGLKKEVV-QISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
            +LG   +    +  + IS L+  VV Q+ T      HS A+T  GE++ WG    G+LG 
Sbjct: 1183 RLGQGNSDDLHVLTV-ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGH 1241

Query: 158  GKKAAKVIPIPTKVECLSGI-----------------------FTKQAALGFEQSVAVTG 194
            G    +  P   ++E L G                           Q + GF+ S  VT 
Sbjct: 1242 GNSDRQRRP--RQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVVTA 1299

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV-KIA--AAGFLHSA 251
             GK+ ++G G  GRLG G  S+         +  P  +  LEG ++ ++A  A G  H+ 
Sbjct: 1300 DGKLFTFGNGDYGRLGLGNTSN---------KKLPERVAALEGYQIGQVANVACGLNHTL 1350

Query: 252  CIDENGR-VYIFGDRAVDKMLFQEGNHARR------------PSLISKLPYS-------E 291
             +  +G  V+ FGD    K+    GN   +            P+L  +L          +
Sbjct: 1351 VVSADGMMVWAFGDGDYGKLGL--GNSTAKSSPQVWAVILQSPTLCQELKVDVLCGISIK 1408

Query: 292  EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            +V CG   +  LT  G ++T+G +    L        + P+++    S   V  V+ G +
Sbjct: 1409 KVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPA-LSGVHVQDVAVGAE 1467

Query: 352  HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
            HT A+S  G +  WG             +S GQLG G+      PT+V   +     QVS
Sbjct: 1468 HTLALSSTGDVYAWG------------SNSEGQLGLGHTNHVREPTVVTMLQGKHIHQVS 1515

Query: 411  CGFNHTGA 418
             G  H+ A
Sbjct: 1516 AGRCHSAA 1523



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 69/176 (39%), Gaps = 40/176 (22%)

Query: 271  LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            L + G +   P+       +++VVCG   T V+   G +   G    G LG G+ D LH 
Sbjct: 1135 LAEAGRNILVPTTAPSFSQAQQVVCGQNCTFVIQPNGTVLACGEGSYGRLGQGNSDDLHV 1194

Query: 331  PERVQGPFSESPVDQV--SCGWK-HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 386
               +        V Q+  SCG   H+ A++E G++ +WG G              G+LGH
Sbjct: 1195 LTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDY------------GKLGH 1241

Query: 387  GNDVDYIHPT---------IVNFGENVKA--------------LQVSCGFNHTGAL 419
            GN      P          +V  G    A              LQ+SCGF H+  +
Sbjct: 1242 GNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHSAVV 1297


>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
 gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 747

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 180/385 (46%), Gaps = 53/385 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV  +  +  ++  ++ G  H L L   G  +A G N FGQ
Sbjct: 224 WGDNRYGQLGDGTTVRRAAPVRVANLD--AVTHISAGAYHALALRADGTAWAWGYNAFGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  +L P+ I GL  E   +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTTVQRTL-PVLI-GLT-ETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+      ++G  T  A  GF  SVA+   G   SWG    G+LG            
Sbjct: 339 SAVPLH---AGMTGGVTLVA--GFRHSVALGADGTAWSWGDNVFGQLGD----------- 382

Query: 223 STSEYTPRLIK-ELEGVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             + + PR+   ++ G+ +  A A  G LH+  +  NGR++ +GD    ++    GN  +
Sbjct: 383 --TTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQL----GNGTQ 436

Query: 280 RPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           + S +  LP +      V  G  HT  L   G +++WG+N+ G LG G+     +P +V 
Sbjct: 437 QNSSL-PLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRTDRSTPVQVP 495

Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           G    + V  ++ G  H+ A+ S G +  WGWG           +  GQLG G  VD   
Sbjct: 496 G---LTGVTSIATGDYHSLALRSNGTV--WGWG----------FNRYGQLGDGTTVDRTQ 540

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           P  V+   N+  + ++ G  H+ AL
Sbjct: 541 PVQVSGLTNI--VSIAAGGGHSLAL 563



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 152/365 (41%), Gaps = 39/365 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           R    +W  GD     LGS      PV         + A+  GG+ +L L   G V+A G
Sbjct: 166 RADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWG 225

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            N +GQLG    +     P+R++ L   V  IS G +H+ A+  DG  + WG N+ GQLG
Sbjct: 226 DNRYGQLGDGTTV-RRAAPVRVANLDA-VTHISAGAYHALALRADGTAWAWGYNAFGQLG 283

Query: 157 LGKKAAKVIPIPTKVECLSGIF-TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G    + +P+      L G+  T+    G   S+AV   G V +WG     +LG G   
Sbjct: 284 DGTTVQRTLPV------LIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNL- 336

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                   TS   P       GV +    AGF HS  +  +G  + +GD    ++     
Sbjct: 337 --------TSSAVPLHAGMTGGVTL---VAGFRHSVALGADGTAWSWGDNVFGQLGDTTF 385

Query: 276 NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                P  ++ L     +   G  HT +L + G L+ WG N  G LG G+      P   
Sbjct: 386 QPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPL-- 443

Query: 335 QGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             P + + +  VS G +HTAA+  +G + +W            G +  GQLG G   D  
Sbjct: 444 --PVNLTGITSVSSGHRHTAALRLDGTVWSW------------GTNQYGQLGDGTRTDRS 489

Query: 394 HPTIV 398
            P  V
Sbjct: 490 TPVQV 494



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 136/294 (46%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+   R  PV         + ++A G  H+L L   G V+  G N +GQ
Sbjct: 472 WGTNQYGQLGDGTRTDRSTPVQVPGLT--GVTSIATGDYHSLALRSNGTVWGWGFNRYGQ 529

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  + +P+++SGL   +V I+ G  HS A+  DG ++ +G N +GQLG G +  
Sbjct: 530 LGDGTTVDRT-QPVQVSGLTN-IVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTW 587

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +   L  + +  A  G   S+A+   G V +WG   SG+LG G          
Sbjct: 588 TILPV--QAVGLGNVVSLAA--GKMYSLALRADGTVWAWGYNASGQLGVGT--------- 634

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  +  L    +    AG  HS  +  +G V+ +G     ++     ++   P 
Sbjct: 635 TQGSAVPLQVSGLS--AITSITAGTYHSLALRSDGWVWAWGFNFEGQLGNGTSDNRLTPG 692

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           L+  +  +  +  G  H+  + + G L+ WG N +G LG G       P +VQG
Sbjct: 693 LVVSMSNATAIFAGDLHSLAVRADGTLWAWGLNSHGQLGTGDTVEAWFPVQVQG 746



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 151/326 (46%), Gaps = 29/326 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+ + +  PV  +     S  ++A G  ++L L E G V+A G N  GQ
Sbjct: 74  WGFNRLGQLGDGTTQDKAAPVQVAGVA--SAVSVAAGDQYSLALDENGDVWAWGDNASGQ 131

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +    +P R+SGL + V  +++G+ H+ A+  DG ++ WG N + QLG      
Sbjct: 132 LG-DGTLTPRAQPRRVSGLTQGV-SLASGFAHAVALRADGTVWAWGDNRSNQLGSATLTR 189

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +PIP  V  LS I    A  G   S+A+   G V +WG    G+LG G          
Sbjct: 190 SPVPIP--VPGLSDIVAVVA--GGSSSLALRADGTVWAWGDNRYGQLGDGT--------- 236

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
           +     P  +  L+   V   +AG  H+  +  +G  + +G  A  ++   +G   +R  
Sbjct: 237 TVRRAAPVRVANLD--AVTHISAGAYHALALRADGTAWAWGYNAFGQL--GDGTTVQRTL 292

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P LI  L  +  VV G YH+  + + G ++ WG N    LG G++     P         
Sbjct: 293 PVLIG-LTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGV 351

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWG 365
           + V     G++H+ A+ ++G   +WG
Sbjct: 352 TLV----AGFRHSVALGADGTAWSWG 373



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 167/396 (42%), Gaps = 63/396 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG  + + R  PV  +        A   G  HT+ L   G ++A G N+ GQ
Sbjct: 372 WGDNVFGQLGDTTFQPRMAPVQVTGLALGRADA-TSGQLHTVMLGANGRLWAWGDNNQGQ 430

Query: 103 LGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       SL  P+ ++G    +  +S+G+ H++A+ +DG ++ WG N  GQLG G + 
Sbjct: 431 LGNGTQQNSSLPLPVNLTG----ITSVSSGHRHTAALRLDGTVWSWGTNQYGQLGDGTRT 486

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG------QES 215
            +  P+  +V  L+G+     A G   S+A+   G V  WG    G+LG G      Q  
Sbjct: 487 DRSTPV--QVPGLTGV--TSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV 542

Query: 216 SILGF---------------LRS------------------TSEYTPRLIKELEGVKVKI 242
            + G                LRS                  T  +T   ++ +    V  
Sbjct: 543 QVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGTRTWTILPVQAVGLGNVVS 602

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            AAG ++S  +  +G V+ +G  A  ++       +  P  +S L     +  G YH+  
Sbjct: 603 LAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAVPLQVSGLSAITSITAGTYHSLA 662

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           L S G ++ WG N  G LG G+ D   +P  V    S S    +  G  H+ A+     L
Sbjct: 663 LRSDGWVWAWGFNFEGQLGNGTSDNRLTPGLV---VSMSNATAIFAGDLHSLAVRADGTL 719

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            W W          G +S GQLG G+ V+   P  V
Sbjct: 720 -WAW----------GLNSHGQLGTGDTVEAWFPVQV 744



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 126/282 (44%), Gaps = 20/282 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y +LG G+L S   P+        +L A   G  H++ L   G  ++ G N FGQ
Sbjct: 323 WGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVA---GFRHSVALGADGTAWSWGDNVFGQ 379

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P++++GL       ++G  H+  +  +G L+ WG N+ GQLG G +  
Sbjct: 380 LG-DTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQN 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+P  +  ++ + +     G   + A+   G V SWG    G+LG G          
Sbjct: 439 SSLPLPVNLTGITSVSS-----GHRHTAALRLDGTVWSWGTNQYGQLGDGTR-------- 485

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L GV     A G  HS  +  NG V+ +G     ++         +P 
Sbjct: 486 -TDRSTPVQVPGLTGVTS--IATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQPV 542

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +S L     +  GG H+  L S G ++ +G N +G LG G+
Sbjct: 543 QVSGLTNIVSIAAGGGHSLALRSDGTVWAFGYNFDGQLGNGT 584



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/329 (27%), Positives = 139/329 (42%), Gaps = 46/329 (13%)

Query: 78  CGGAHTLFLTETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSS 136
            GG   L    T C V A    D     + +  G  L P+R++           G +HS 
Sbjct: 14  LGGLLALVSVTTACGVDAVQERDSATETVRQRAGARLPPVRLA----------VGQYHSL 63

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGG 195
           A+  +G ++ WG N  GQLG G    K  P+      ++G+ +    A G + S+A+   
Sbjct: 64  AVHSEGTVFAWGFNRLGQLGDGTTQDKAAPVQ-----VAGVASAVSVAAGDQYSLALDEN 118

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACID 254
           G V +WG   SG+LG G           T    PR +  L +GV +   A+GF H+  + 
Sbjct: 119 GDVWAWGDNASGQLGDGTL---------TPRAQPRRVSGLTQGVSL---ASGFAHAVALR 166

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            +G V+ +GD   +++       +  P  +  L     VV GG  +  L + G ++ WG 
Sbjct: 167 ADGTVWAWGDNRSNQLGSATLTRSPVPIPVPGLSDIVAVVAGGSSSLALRADGTVWAWGD 226

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           N  G LG G+     +P RV    +   V  +S G  H  A+ ++G    W         
Sbjct: 227 NRYGQLGDGTTVRRAAPVRVA---NLDAVTHISAGAYHALALRADGTAWAW--------- 274

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
              G+++ GQLG G  V    P ++   E
Sbjct: 275 ---GYNAFGQLGDGTTVQRTLPVLIGLTE 300



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 135/294 (45%), Gaps = 28/294 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           LA G  H+L +   G V+A G N  GQLG       +  P++++G+    V ++ G  +S
Sbjct: 55  LAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQDKA-APVQVAGV-ASAVSVAAGDQYS 112

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS-GIFTKQAALGFEQSVAVTG 194
            A+  +G+++ WG N++GQLG G    +    P +V  L+ G+     A GF  +VA+  
Sbjct: 113 LALDENGDVWAWGDNASGQLGDGTLTPRA--QPRRVSGLTQGV---SLASGFAHAVALRA 167

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG   S +LG    S+ L     T    P  +  L  +   +  AG   S  + 
Sbjct: 168 DGTVWAWGDNRSNQLG----SATL-----TRSPVPIPVPGLSDIVAVV--AGGSSSLALR 216

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
            +G V+ +GD    ++   +G   RR  P  ++ L     +  G YH   L + G  + W
Sbjct: 217 ADGTVWAWGDNRYGQL--GDGTTVRRAAPVRVANLDAVTHISAGAYHALALRADGTAWAW 274

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G N  G LG G+      P  +    +E+    V  G  H+ A+ ++G +  WG
Sbjct: 275 GYNAFGQLGDGTTVQRTLPVLIG--LTETRT--VVAGNYHSLAVRTDGAVWAWG 324


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 173/372 (46%), Gaps = 58/372 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  HT  +T  G V++ G    G+LG  +  ++ +   P  I  L    VQ ++
Sbjct: 125 VQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            G +HS A+T  G+LY WG  ++  G LG G   +   P       L G+     A G  
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGP-LEGVRVSSVACGPW 240

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +V VT  G++ S+G G  G LGHG   S            PR ++ L+G+K   AA G 
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291

Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
            H+A + E            +G+++ +GD   +++   +      P+ ++ L      +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFS--ESPVDQVSC 348
            CG   T  LT+ G LYT GS   G LG         P+   R+ G      + +++VSC
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGRTLIEEVSC 403

Query: 349 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  H AA+ S+G + TWG G +            G+LGHG+  D   PT+V    + +  
Sbjct: 404 GAYHVAALTSKGDVCTWGKGAN------------GRLGHGDAEDRDVPTLVEALRDKQVK 451

Query: 408 QVSCGFNHTGAL 419
           +VSCG + T A+
Sbjct: 452 KVSCGSSFTSAI 463



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 130/302 (43%), Gaps = 45/302 (14%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           V GEL+MWG+   G  G+ KK          +P  V  L  +  +Q A G   +  VT  
Sbjct: 83  VFGELWMWGEGI-GDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTRQ 141

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    GRLGHG ++ +           P+LI  L    V+  A G  HS  + +
Sbjct: 142 GEVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQ 192

Query: 256 NGRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
           +G +Y +GD   +  L   GN       +R     +      V CG +HT ++TS G+L+
Sbjct: 193 SGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLF 252

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------ 358
           ++G    G LG G       P  V+         + +CG  HTAA+ E            
Sbjct: 253 SFGDGTFGVLGHGDRKSASMPREVES-LKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSL 311

Query: 359 -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            GK+ TWG G  +            +LGHG+    + PT V    +    QV+CG + T 
Sbjct: 312 SGKLFTWGDGDKN------------RLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTV 359

Query: 418 AL 419
           AL
Sbjct: 360 AL 361



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 113/233 (48%), Gaps = 21/233 (9%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++  WG G    +G G  +  L     T  + PR ++ L  + V+  A G  H+A +  
Sbjct: 85  GELWMWGEG----IGDGGVTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHTALVTR 140

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
            G V+ +G+ +  ++          P LI  L  S  + V CG YH+C +T  G+LYTWG
Sbjct: 141 QGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSCAVTQSGDLYTWG 200

Query: 314 --SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
             ++  G LG G+     +P+RV GP     V  V+CG  HT  + S G++ ++G     
Sbjct: 201 DGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFSFG----D 256

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GTF        G LGHG+      P  V   + +K L+ +CG  HT A++E +
Sbjct: 257 GTF--------GVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAVVEVM 301



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG G  E +  P   +A   H+ + +ACG + T+ LT TG +Y  G   +GQ
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQ 377

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +  G     LR+   +  + ++S G +H +A+T  G++  WGK +NG+LG G   A
Sbjct: 378 LGDPQATGRLPGVLRLG--RTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGD--A 433

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +   +PT VE L     K+ + G   + A+
Sbjct: 434 EDRDVPTLVEALRDKQVKKVSCGSSFTSAI 463


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 28/356 (7%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVPVHLSCGDEHSAVVTGNNKLY--MFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG N+ GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL  K    + +P +V    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGL--KNVTNVCVPQQVTI--GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   +  +LG  R     TP+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQ--LLGNHR-----TPQLVSEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCV 302
           +  + EN  VY      FG   +   LF+  +    P +I  +       + CG  HT +
Sbjct: 255 TVVLTENA-VYTFGLGQFGQLGLGTFLFETSD----PKVIENIRDQTISYISCGESHTAL 309

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVL-HSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +T  G +YT+G   +G LG+G  +   H    +   FS   V  V+CG  H    +
Sbjct: 310 ITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCHMVVFA 365



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 165/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G             T+   P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIG---------LKNVTNVCVPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFSRFIVKL-VACG 357



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 148/304 (48%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  +  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +   +   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG +HT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSDPKVIENIRDQTISYISCGESHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 168/341 (49%), Gaps = 41/341 (12%)

Query: 44  GNGDYGRLGLG--SLESRWRPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLNDF 100
           G G YGRLGLG  + +S  + +V    +    + +      HTL LT  GC+++ G  D+
Sbjct: 340 GKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIFSWGDGDY 399

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G+LG   ++ +   P  I G   ++ VV +S GY HS+ +T +G+L+ WG+   G+LGLG
Sbjct: 400 GKLGHGSSLTHK-SPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLG 458

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG-KVLSWGAGGSGRLGHGQESSI 217
              ++ +P+  K    +G        G   ++ +   G  V S+GAG +G+LGHG  S +
Sbjct: 459 DNTSRNVPVLVKDIASAG----SVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRV 514

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV------DKML 271
                    Y P++I+ + G+      AG  +S  ++++G+V+ +G  A       D   
Sbjct: 515 ---------YRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDATF 565

Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID-VL 328
                   +P+LI +L ++   ++  G  H   LT   E+Y WG+N  G  G+G  +  +
Sbjct: 566 M-------KPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSPI 618

Query: 329 HSPERVQGPFSESPVDQVSCGWKH----TAAISEGKILTWG 365
             P +VQ   +   + Q+S G  H    TA  S+  +++W 
Sbjct: 619 SVPTQVQQ-LNNVTIHQISAGTSHSIAYTAMPSDRHVISWS 658



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 60/366 (16%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY- 132
           + L  G   T  ++  GCV + G   +G+LG+ ++   S     +    + + +IS+   
Sbjct: 318 QMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKG 377

Query: 133 --HHSSAITVDGELYMWGKNSNGQLG----LGKKAAKVI--PIPTK-VECLSGIFTKQAA 183
              H+ A+T +G ++ WG    G+LG    L  K+ K+I  P+  + V C+S        
Sbjct: 378 SDGHTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSA------- 430

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G+  S  VT  G++ +WG G  GRLG G          +TS   P L+K+       IA
Sbjct: 431 -GYRHSACVTQEGQLFTWGEGDYGRLGLGD---------NTSRNVPVLVKD-------IA 473

Query: 244 AAGFL-----HSACIDENG-RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVC 295
           +AG +     H+  + ++G  V+ FG     K+   + +   RP +I  +      ++  
Sbjct: 474 SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCA 533

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  ++  L   G++++WG     CLG GS D       +    + + V  ++ G  H  A
Sbjct: 534 GSQYSLALNDSGQVFSWGC--GACLGCGSPDATFMKPTLIDELTFTRVVDITSGDGHCMA 591

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQ--LGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           ++   ++  W            G+++ GQ  LGH N    + PT V    NV   Q+S G
Sbjct: 592 LTHNNEVYCW------------GNNAMGQCGLGHTNSPISV-PTQVQQLNNVTIHQISAG 638

Query: 413 FNHTGA 418
            +H+ A
Sbjct: 639 TSHSIA 644



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 92/236 (38%), Gaps = 58/236 (24%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV---------- 92
           WG GDYGRLGLG   SR  PV+       S  ++ CG +HTL L + G            
Sbjct: 447 WGEGDYGRLGLGDNTSRNVPVLVKDIA--SAGSVVCGSSHTLVLAQDGLTVWSFGAGDNG 504

Query: 93  --------------------------------YATGLNDFGQ---------LGISENIGY 111
                                           Y+  LND GQ         LG       
Sbjct: 505 KLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLGCGSPDAT 564

Query: 112 SLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK 170
            ++P  I  L    VV I++G  H  A+T + E+Y WG N+ GQ GLG   +  I +PT+
Sbjct: 565 FMKPTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNSP-ISVPTQ 623

Query: 171 VECLSGIFTKQAALGFEQSVAVTG---GGKVLSWGAGGSGRLGHGQESSILGFLRS 223
           V+ L+ +   Q + G   S+A T       V+SW       L       +  FL S
Sbjct: 624 VQQLNNVTIHQISAGTSHSIAYTAMPSDRHVISWSRPYCVDLSESTFKKMNNFLSS 679



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 24/231 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG GS  +   P ++     +  +  ++ G  H+  +T+ G ++  G  D+G
Sbjct: 394 WGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYG 453

Query: 102 QLGISENIGYSLEPLRISGLKKEVV---QISTGYHHSSAITVDGELYMW--GKNSNGQLG 156
           +LG+ +N   +     +  L K++     +  G  H+  +  DG L +W  G   NG+LG
Sbjct: 454 RLGLGDNTSRN-----VPVLVKDIASAGSVVCGSSHTLVLAQDG-LTVWSFGAGDNGKLG 507

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G  +   +  P  +E ++G+   +   G + S+A+   G+V SWG G    LG G   +
Sbjct: 508 HGDTSR--VYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGAC--LGCGSPDA 563

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
              F++      P LI EL   +V    +G  H   +  N  VY +G+ A+
Sbjct: 564 --TFMK------PTLIDELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAM 606



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 125/288 (43%), Gaps = 33/288 (11%)

Query: 121 LKKEVVQISTGYHHSSAITV-------DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           L ++VV +S  Y  S   T        + ++Y WG NS+ QL   +  +  I  P KV+ 
Sbjct: 256 LMEQVVSLSEEYAISCTETATKSVDMNNCDVYAWGSNSSHQLA--ELGSDKIVFPKKVKS 313

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
                ++    G   + AV+G G V S G G  GRLG G +S+    L++     P+ I+
Sbjct: 314 FGN--SQMLEAGQYCTFAVSGDGCVRSCGKGSYGRLGLG-DSNNQSTLKTIVFDPPQTIR 370

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
           ++   K    + G  H+  +   G ++ +GD    K+        + P +I        V
Sbjct: 371 KISSSK---GSDG--HTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIV 425

Query: 294 VC--GGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           VC   GY H+  +T  G+L+TWG  + G LG+G     + P  V+   S      V CG 
Sbjct: 426 VCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASAG---SVVCGS 482

Query: 351 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            HT  +++  +  W +G              G+LGHG+      P ++
Sbjct: 483 SHTLVLAQDGLTVWSFGA----------GDNGKLGHGDTSRVYRPKVI 520



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 15/122 (12%)

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
           HT  LT+ G +++WG  + G LG GS     SP+ ++GP +   V  VS G++H+A ++ 
Sbjct: 381 HTLALTTEGCIFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQ 440

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           EG++ TWG G              G+LG G++     P +V   +   A  V CG +HT 
Sbjct: 441 EGQLFTWGEGDY------------GRLGLGDNTSRNVPVLVK--DIASAGSVVCGSSHTL 486

Query: 418 AL 419
            L
Sbjct: 487 VL 488


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 170/369 (46%), Gaps = 41/369 (11%)

Query: 55  SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           S+E +   ++   F K     L            +G V+      FG+   +ENI     
Sbjct: 65  SVEEKRETMIYDDFRKKD--ELRANTYRKFRTRHSGAVFT-----FGKSKFAENI----- 112

Query: 115 PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
           P +       + Q+S G  H++ +T + +LYM G N+ GQLGLG K    +  PT V+ L
Sbjct: 113 PSKFWLRNDTLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKT--TVNKPTCVKAL 170

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                K AA G   ++  T GG V + G    G+LG G       F    S +T R    
Sbjct: 171 KPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTF-HQISFFTSRY--- 226

Query: 235 LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEV 293
               K+K  +AG   SA + E+G +Y++GD +  ++ L  E N      ++   P S  V
Sbjct: 227 ----KIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSW-V 281

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWK 351
            CG YH+ ++T+ GELYT+G  ENG LG+ S  + +   P+ V G      V+QV+CG  
Sbjct: 282 SCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPG--ISGKVNQVACGGG 339

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 410
           HT A++E  + T+G G              GQLG G  + +   P +V      K   V+
Sbjct: 340 HTVALTEEDVYTFGLG------------EFGQLGLGTCIFETSVPKVVEHLRKQKIHYVA 387

Query: 411 CGFNHTGAL 419
           CG NHT  +
Sbjct: 388 CGENHTALI 396



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 39/297 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           + G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +     + ++ Q+S G + S+A+T DGELYMWG NS GQ+GL  +
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   +P       + G      + G+  S  VT  G++ ++G   +G+LG   E      
Sbjct: 264 SNVCVP----CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENGKLGLSSE------ 313

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRA 266
            +  +   P+L+  + G KV   A G  H+  + E   VY FG              + +
Sbjct: 314 -QLKNHRIPQLVPGISG-KVNQVACGGGHTVALTEED-VYTFGLGEFGQLGLGTCIFETS 370

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           V K++     H R+     K+ Y   V CG  HT +++  G +YT+G   +G LG+G
Sbjct: 371 VPKVV----EHLRK----QKIHY---VACGENHTALISDTGLMYTFGDGRHGKLGLG 416



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 159/351 (45%), Gaps = 39/351 (11%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST- 130
           +L  L+CG  HT F+T    +Y  G N++GQLG+      + +P  +  LK E V+ +  
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKFAAC 180

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALG 185
           G +H+   T  G +Y  G NS+GQLGLG    +     T    +S  FT     KQ + G
Sbjct: 181 GRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEER-----TTFHQIS-FFTSRYKIKQLSAG 234

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G++  WG    G++G   ES++    R            + G  V   + 
Sbjct: 235 SNTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV-----------VIGKPVSWVSC 283

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTC 301
           G+ HSA +  +G +Y FG+    K+     Q  NH R P L+  +     +V CGG HT 
Sbjct: 284 GYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNH-RIPQLVPGISGKVNQVACGGGHTV 342

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            LT   ++YT+G  E G LG+G+     S  +V     +  +  V+CG  HTA IS+  +
Sbjct: 343 ALTEE-DVYTFGLGEFGQLGLGTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGL 401

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           +     G HG            LG  N  +   PT+ +         V+CG
Sbjct: 402 MYTFGDGRHGKLG---------LGEENFTNQFIPTLCSNFLRFSVHLVACG 443



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 112/247 (45%), Gaps = 31/247 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           Q + G E +  VTG  K+   G+   G+LG G ++++           P  +K L+  KV
Sbjct: 125 QLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTV---------NKPTCVKALKPEKV 175

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLPYSEEVVCGG 297
           K AA G  H+    E G VY  G  +  ++     +E     + S  +     +++  G 
Sbjct: 176 KFAACGRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGS 235

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             +  LT  GELY WG N  G +G+ S   +  P RV       PV  VSCG+ H+A ++
Sbjct: 236 NTSAALTEDGELYMWGDNSEGQIGLASESNVCVPCRV---VIGKPVSWVSCGYYHSALVT 292

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFN 414
            +G++ T+G                G+LG  ++    H  P +V  G + K  QV+CG  
Sbjct: 293 TDGELYTFG------------EPENGKLGLSSEQLKNHRIPQLVP-GISGKVNQVACGGG 339

Query: 415 HTGALLE 421
           HT AL E
Sbjct: 340 HTVALTE 346



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 12/209 (5%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G++GL S  +   P  C       +  ++CG  H+  +T  G +Y  G  + G
Sbjct: 249 MWGDNSEGQIGLASESNVCVP--CRVVIGKPVSWVSCGYYHSALVTTDGELYTFGEPENG 306

Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG+ SE +     P  + G+  +V Q++ G  H+ A+T + ++Y +G    GQLGLG  
Sbjct: 307 KLGLSSEQLKNHRIPQLVPGISGKVNQVACGGGHTVALT-EEDVYTFGLGEFGQLGLGTC 365

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +   +P  VE L        A G   +  ++  G + ++G G  G+LG G+E+     
Sbjct: 366 IFET-SVPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEEN----- 419

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
              T+++ P L        V + A G  H
Sbjct: 420 --FTNQFIPTLCSNFLRFSVHLVACGGCH 446



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + S+  +ACGG H L  
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCHMLVF 450


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL-TETGCVYATGLNDF 100
            +WG  D  +LG G   S+ +  V S F          GG+ +LF+ +  G +YA G    
Sbjct: 2059 VWGLNDKDQLG-GMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEGTN 2117

Query: 101  GQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
            G+LG+  S N+ Y   P  I  L + V++   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2118 GRLGLGHSNNVPY---PRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 2174

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 2175 GHGNRLN--LDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 2230

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+LIK L G ++   A G     +  + + G V+ +GD    K+   
Sbjct: 2231 -------NITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 2283

Query: 274  EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  I +L   E  ++ CG   +  LT  GE++TWG  +   LG GS   +  P
Sbjct: 2284 GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKP 2343

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              ++    +  V  V+ G  H  A+++ G++  WG         ++ H   GQ G+G  +
Sbjct: 2344 TVIES-LKDKKVIHVAVGALHCLAVTDTGQVYAWG---------DNDH---GQQGNGTTI 2390

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P +V+  E+V   +V+CG +H+ A
Sbjct: 2391 VNRKPALVHGLEDVHINRVACGSSHSIA 2418



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G VYATG    G
Sbjct: 3036 WGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLV-GGEQTLFAVTADGKVYATGYGAGG 3094

Query: 102  QLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI       +   LE ++   +KK  + +++G  H  A++ D ++Y WG+  +G+LG 
Sbjct: 3095 RLGIGGTDSVLVPTLLESIQHVFIKK--IAVNSGGKHCLALSADNDVYSWGEGDDGKLGH 3152

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + A     P  +E L G      A G   S A+T  G++ +WG G  GRLGHG     
Sbjct: 3153 GNRLA--CETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGD---- 3206

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+LI+EL G KV   A  +G   + CI ++  V+ +GD    K+     
Sbjct: 3207 -----SEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 3261

Query: 276  NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ + +  P++
Sbjct: 3262 DGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKK 3321

Query: 334  VQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S EG++ TW            G +  GQLG       
Sbjct: 3322 VAA-LQGKKIISIATGSLHCVACSDEGEVFTW------------GDNDEGQLGDDTTNAI 3368

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V+  +  K   V+CG  HT A
Sbjct: 3369 QRPRLVSALQGKKITNVACGSAHTLA 3394



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 25/271 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +  +P +  A     ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 2166 WGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEYGR 2225

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +NI   L+P  I  L    +VQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2226 LGHGDNIT-QLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG- 2283

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+ +   Q   G + S+A+T  G+V +WG G   RLGHG +  +  
Sbjct: 2284 -GSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHV-- 2340

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P +I+ L+  KV   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2341 -------RKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 2389

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHTCVLT 304
               R+P+L+  L   +   V CG  H+   T
Sbjct: 2390 IVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 52/351 (14%)

Query: 89   TGC-VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
             GC V+  GLND  QLG          +  +    L P+ I+G  K +  +S        
Sbjct: 2053 VGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSH------- 2105

Query: 138  ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
               +G+LY  G+ +NG+LGLG   +  +P P  +  LS    K+ A+  G + ++A+T  
Sbjct: 2106 ---EGKLYACGEGTNGRLGLGH--SNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLD 2160

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV SWG G  G+LGHG   ++           P++I+ L   K++  A G  HSA I  
Sbjct: 2161 GKVFSWGEGEDGKLGHGNRLNL---------DKPKMIEALRSKKIRDIACGSSHSAAITS 2211

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYT 311
            +G +Y +G     ++   +     +P LI  L      +V CG     T  LT  G +++
Sbjct: 2212 SGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFS 2271

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSH 370
            WG  + G LG G  +  + P  ++   +   V Q+ CG + + A+++ G++ TWG G   
Sbjct: 2272 WGDGDFGKLGRGGSEGCNIPHNIER-LNALEVVQIECGAQFSLALTKTGEVWTWGKGDYF 2330

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                        +LGHG+D     PT++   ++ K + V+ G  H  A+ +
Sbjct: 2331 ------------RLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTD 2369



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 137/302 (45%), Gaps = 34/302 (11%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            V Q STG   S   TV   +++WG N   QLG G K +KV  +P + + LS ++    A 
Sbjct: 2041 VAQDSTGEPSS---TVGCRVFVWGLNDKDQLG-GMKGSKV-KLPVQSDFLSQLWPIHIAG 2095

Query: 185  GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
            G +    V+  GK+ + G G +GRLG G  +++           PR I  L    +K  A
Sbjct: 2096 GSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNV---------PYPRPIPFLSQYVIKKVA 2146

Query: 245  --AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              +G  H+  +  +G+V+ +G+    K+      +  +P +I  L   +  ++ CG  H+
Sbjct: 2147 VHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHS 2206

Query: 301  CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAIS 357
              +TS GELYTWG  E G LG G       P+ ++       V QV+CG +     A   
Sbjct: 2207 AAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIV-QVACGSRDAQTLALTD 2265

Query: 358  EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            EG + +WG     G F        G+LG G       P  +     ++ +Q+ CG   + 
Sbjct: 2266 EGWVFSWG----DGDF--------GKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSL 2313

Query: 418  AL 419
            AL
Sbjct: 2314 AL 2315



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 137/335 (40%), Gaps = 81/335 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IP---------------------------------- 166
            G +Y WG N  GQLG G + AKV IP                                  
Sbjct: 3031 GTIYGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATG 3089

Query: 167  ----------------IPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                            +PT +E +  +F K+ A+  G +  +A++    V SWG G  G+
Sbjct: 3090 YGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGK 3149

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG         R   E TP+LI+ L+G ++   A G  HSA I   G++Y +G     
Sbjct: 3150 LGHGN--------RLACE-TPKLIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYG 3200

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P LI +L   +  +V CG     T  +T    +++WG  + G LG G 
Sbjct: 3201 RLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 3260

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P++++   +   V +V CG + + A++  G + TWG G  H            +
Sbjct: 3261 SDGCKVPKKIES-LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYH------------R 3307

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            LGHG       P  V   +  K + ++ G  H  A
Sbjct: 3308 LGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVA 3342


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 139/275 (50%), Gaps = 28/275 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A     ++ +ACGG+H+  +   G +Y  GL ++G+
Sbjct: 3026 WGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGR 3085

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L P  +  L+ + V+Q++ G   +   A+T  G +Y WG    G+LG G 
Sbjct: 3086 LGHGDNT-TQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG 3144

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 +P P  +E L+G+   Q   G + S+A+T  G+V +WG G   RLGHG ++ +  
Sbjct: 3145 SEGCSVPHP--IERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV-- 3200

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P+L++ L+G KV   A G LH   + +NG+VY +GD        Q+GN   
Sbjct: 3201 -------RKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHG----QQGNSTT 3249

Query: 279  ---RRPSLISKLP--YSEEVVCGGYHT---CVLTS 305
               R+P+L+  L       V CG  H+   C L S
Sbjct: 3250 TVNRKPALVQGLEGCKISRVACGSSHSIAWCTLDS 3284



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 136/296 (45%), Gaps = 18/296 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG   N      P  I  L+ KEVV I+ G  
Sbjct: 4027 AINSGGKHCLALSAEGEVYSWGEGEDGKLG-HGNRSPCDRPRAIESLRGKEVVDIAAGGA 4085

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+ IT  GELY WGK   G+LG G    +  P    V+ L G      A G    Q++ 
Sbjct: 4086 HSACITSTGELYSWGKGRYGRLGHGDSEDQTKP--KLVDALKGYRVTDVACGSGDAQTLC 4143

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I  L+G+ V     G   S 
Sbjct: 4144 ITDDDSVWSWGDGDYGKLGRGG---------SDGCKVPMKIDALQGLGVIKVECGSQFSV 4194

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP   + L   +   + CG  H    T  GE+
Sbjct: 4195 ALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEV 4254

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
            YTWG N+ G LG G+ + +  P R+        +++V+CG  H+ A S  K +  G
Sbjct: 4255 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHSLAWSTNKPVNAG 4309



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 126/249 (50%), Gaps = 17/249 (6%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
           G+H L LT  G VY+ G  DFG+LG  + +     P+ I+ L  K VV ++ G HHS+AI
Sbjct: 487 GSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCD-SPMLINELHGKSVVNVACGSHHSAAI 545

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGG 196
           T  GEL+ WG+ S G+LGLG  + + I  P  V  L G+     A G    Q++A+   G
Sbjct: 546 TASGELFTWGRGSFGRLGLG--STEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTG 603

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V SWG G  G+LG G          S     P+L+ +L+G+ V     G  +SA + +N
Sbjct: 604 SVYSWGDGEYGKLGRGG---------SEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKN 654

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGS 314
           G V+ +G+    K+      H R P  +  L   +   +  G +H    T  GEL +WG 
Sbjct: 655 GAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGR 714

Query: 315 NENGCLGIG 323
           N+ G LG G
Sbjct: 715 NDKGQLGEG 723



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 166/363 (45%), Gaps = 49/363 (13%)

Query: 74   KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-----VQI 128
            K + CG       T+   V+  GLND  QLG     G     ++  G+ + +     VQI
Sbjct: 2901 KKVKCGSGVKDIQTQ---VFVWGLNDKDQLG-----GPKGSKIKTPGINETLSTLKCVQI 2952

Query: 129  STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GF 186
              G      +T DG+L+  G+ +NG+LGLG  A  V P P ++  LS    K+ A+  G 
Sbjct: 2953 VGGSKSLFCVTQDGKLFACGEATNGRLGLGISAGNV-PQPRQLTSLSQYVIKKVAVHSGG 3011

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
              ++A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L   +V+  A G
Sbjct: 3012 RHAMALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALRSKRVRDIACG 3062

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCV 302
              HSA I  NG +Y +G     ++   +     RP L+  L      +V  G     T  
Sbjct: 3063 GSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLA 3122

Query: 303  LTSGGELYTWGSNENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
            LT  G +Y+WG  + G LG G  +   V H  ER+ G      V Q+ CG + + A+++ 
Sbjct: 3123 LTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNG----VGVCQIECGAQFSLALTKS 3178

Query: 359  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            G++ TWG G               +LGHG D     P +V   +  K   V+ G  H  +
Sbjct: 3179 GQVWTWGKGDYF------------RLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLS 3226

Query: 419  LLE 421
            +L+
Sbjct: 3227 VLD 3229



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 150/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +  +P   ++  ++ +K +A   GG H + LT  G V++ G  D 
Sbjct: 2972 GEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3031

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  L+ K V  I+ G  HS+AI  +G+LY WG    G+LG G 
Sbjct: 3032 GKLGHFSRMNCD-KPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGD 3090

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P    V+ L G    Q ALG    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3091 NTTQLRP--KLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGG---- 3144

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P  I+ L GV V     G   S  + ++G+V+ +G     ++      H
Sbjct: 3145 -----SEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3199

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P L+  L   +   V  G  H   +   G++Y WG N++G  G  +  V   P  VQ
Sbjct: 3200 VRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVNRKPALVQ 3259

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3260 G-LEGCKISRVACGSSHSIA 3278



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 170/387 (43%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         PV C          L  GG  TLF +T  G V ATG    G
Sbjct: 3941 WGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQL-IGGEQTLFSITGDGKVCATGYGAGG 3999

Query: 102  QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LGI      +   L   I  +    V I++G  H  A++ +GE+Y WG+  +G+LG G 
Sbjct: 4000 RLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4059

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++      P  +E L G      A G   S  +T  G++ SWG G  GRLGHG       
Sbjct: 4060 RSP--CDRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGD------ 4111

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               S  +  P+L+  L+G +V   A  +G   + CI ++  V+ +GD    K+     + 
Sbjct: 4112 ---SEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDG 4168

Query: 278  ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER-- 333
             + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P R  
Sbjct: 4169 CKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCT 4228

Query: 334  -VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             +QG      +  ++CG  H  A ++ G++ TWG             +  GQLG G    
Sbjct: 4229 TLQG----KKIVSIACGSLHCVACTDAGEVYTWG------------DNDEGQLGDGTTNA 4272

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  H+ A
Sbjct: 4273 IQRPRLVAALQGKKINRVACGSAHSLA 4299



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 151/338 (44%), Gaps = 33/338 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G ++  G N  GQLG  E     L P+    L     VQ+  G     +IT DG++   
Sbjct: 3935 SGQIWGWGHNHRGQLGGVEGAKVKL-PVSCETLATMRPVQLIGGEQTLFSITGDGKVCAT 3993

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+LG+G   +  +  PT +E +  +F ++ A+  G +  +A++  G+V SWG G 
Sbjct: 3994 GYGAGGRLGIGGTDS--VATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGE 4051

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR I+ L G +V   AAG  HSACI   G +Y +G  
Sbjct: 4052 DGKLGHGNRSPC---------DRPRAIESLRGKEVVDIAAGGAHSACITSTGELYSWGKG 4102

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      +V CG     T  +T    +++WG  + G LG
Sbjct: 4103 RYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLG 4162

Query: 322  IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
             G  D    P ++        V +V CG + + A+++ G + TWG G  H          
Sbjct: 4163 RGGSDGCKVPMKIDA-LQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYH---------- 4211

Query: 381  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
              +LGHG +     P      +  K + ++CG  H  A
Sbjct: 4212 --RLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 19/226 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD+G+LG G   +   P++ +     S+  +ACG  H+  +T +G ++  G   FG+
Sbjct: 502 WGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITASGELFTWGRGSFGR 561

Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL 157
           LG+  +E+I   L P  +SGL    VV ++  +G   + A+   G +Y WG    G+LG 
Sbjct: 562 LGLGSTEDI---LTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGR 618

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G   ++    P  V+ L G+   +   G + S AV   G V +WG G   +LGHG E  +
Sbjct: 619 G--GSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHV 676

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                      PR ++ L G  V   + G  H     E G +  +G
Sbjct: 677 ---------RFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWG 713



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 106/240 (44%), Gaps = 33/240 (13%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+T  G V SWG G  G+LGHG          + +  +P LI EL G  V   A G  H
Sbjct: 491 LALTSEGDVYSWGNGDFGKLGHGD---------TVTCDSPMLINELHGKSVVNVACGSHH 541

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGG--YHTCVLTS 305
           SA I  +G ++ +G  +  ++          P+L+S L      +V CG     T  L  
Sbjct: 542 SAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALAD 601

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
            G +Y+WG  E G LG G  +   +P   +++QG      V +V CG +++AA+ + G +
Sbjct: 602 TGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG----LDVTRVYCGPQYSAAVCKNGAV 657

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            TWG G             G +LGHG +     P  V          +S G +H  A  E
Sbjct: 658 FTWGNG------------EGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE 705



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 46/262 (17%)

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G++A++V+    KV+C SG+   Q               +V  WG     +LG  + S I
Sbjct: 2892 GQRASQVMA--KKVKCGSGVKDIQT--------------QVFVWGLNDKDQLGGPKGSKI 2935

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML---FQE 274
                      TP + + L  +K      G     C+ ++G+++  G+ A +  L      
Sbjct: 2936 ---------KTPGINETLSTLKCVQIVGGSKSLFCVTQDGKLFACGE-ATNGRLGLGISA 2985

Query: 275  GNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            GN  +   L S   Y  + V    GG H   LT  G++++WG  ++G LG  S      P
Sbjct: 2986 GNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3045

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              ++   S+  V  ++CG  H+AAI S G + TWG G              G+LGHG++ 
Sbjct: 3046 RLIEALRSKR-VRDIACGGSHSAAIISNGDLYTWGLG------------EYGRLGHGDNT 3092

Query: 391  DYIHPTIVNFGENVKALQVSCG 412
              + P +V   E  + +QV+ G
Sbjct: 3093 TQLRPKLVKALEGQRVIQVALG 3114



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 73/178 (41%), Gaps = 54/178 (30%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G +GRLGLGS E    P + S     ++  +ACG   A T+ L +TG VY+ G  ++
Sbjct: 554 WGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEY 613

Query: 101 GQLG---------------------------------ISEN-------------IGYSLE 114
           G+LG                                 + +N             +G+  E
Sbjct: 614 GKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTE 673

Query: 115 -----PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
                P ++  L  K V  +S G HH  A T +GEL  WG+N  GQLG G    K  P
Sbjct: 674 EHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLKAEP 731



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 19/193 (9%)

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PY 289
           + ++E +K+   + G  H   +   G VY +G+    K+   +      P LI++L    
Sbjct: 473 LADIEIIKLAAHSEGS-HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              V CG +H+  +T+ GEL+TWG    G LG+GS + + +P  V G    + VD V+CG
Sbjct: 532 VVNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVD-VACG 590

Query: 350 W--KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
                T A+++ G + +WG          DG    G+LG G       P +V+  + +  
Sbjct: 591 SGDAQTIALADTGSVYSWG----------DGEY--GKLGRGGSEGCKAPKLVDKLQGLDV 638

Query: 407 LQVSCGFNHTGAL 419
            +V CG  ++ A+
Sbjct: 639 TRVYCGPQYSAAV 651


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 186/407 (45%), Gaps = 37/407 (9%)

Query: 33  STLQRRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           + L R  A L WG+G+ G+LG+G  + +      +A + +++ A+  G  ++L + + G 
Sbjct: 2   APLPRPAAVLAWGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGR 61

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           ++  G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG N
Sbjct: 62  LFTWGWNQRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGGWHCLAVDDKGRAYAWGGN 121

Query: 151 SNGQLGL-------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
             GQ G        G +A +   IPT   C   +  +Q A G   SV +T  G V +WG 
Sbjct: 122 EYGQCGEEPERKEDGTRALRR-DIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWG- 179

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                     +    G ++  S  TP  ++ LE  KV + A G  H+  + E+  ++ +G
Sbjct: 180 ----------QPWPPGDIKQIS--TPVRVQGLE--KVMMIAVGAFHNLALSEDAVLWAWG 225

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +    ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG
Sbjct: 226 NNEYGQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLG 285

Query: 322 IGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 379
            G     H  P +VQ    E  V QVSCG  H+ A+ S+G+I ++G  G HG     G+ 
Sbjct: 286 FGDDKSSHMVPLKVQLLDGEDIV-QVSCGGTHSVALTSDGRIFSYG-RGDHGRL---GYG 340

Query: 380 SGGQLGHGNDVDY-IHPTIVNFGEN--VKALQVSCGFNHTGALLEYV 423
                GH  +V   + P   + G +   +A  V+CG  HT A++ + 
Sbjct: 341 RKVTTGHPMEVPLNLPPPKTSAGPDGLWQANFVACGGRHTLAIVTWT 387


>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
 gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
          Length = 440

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 144/297 (48%), Gaps = 22/297 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G  +YG++G  + E    P       K  +K +A G  H+L + E G V+A G N++GQL
Sbjct: 43  GRNNYGQIGDSTYEDHNTPYHVERLPK--IKIIARGYDHSLAIDEQGRVWAWGRNNYGQL 100

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G +  I ++   L ++   ++ + +  G+ H+ A+  DG ++ WG N  G+LG G +   
Sbjct: 101 GSAIPIDFNTPQLVVN--HRDFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHS 158

Query: 164 VIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             P   +      L GI  K  ++G+  ++A+   G+V SWG+   G LGH        F
Sbjct: 159 QYPRSVVKKDKTTLQGI-VKIVSVGY-HTLALDKNGEVYSWGSNDFGELGH--------F 208

Query: 221 LRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                 Y  ++    EG++ +K  A G+ HS  I+ENG ++++G     ++     +H  
Sbjct: 209 HNVIQHYAEKV----EGLQNIKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFN 264

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               I  LP   ++ CG +H+  +   G+++ WG+N  G LG         P+++ G
Sbjct: 265 SIVKIDSLPPMVKIACGSWHSLAIDETGQVWGWGNNRYGMLGTKDTISYTYPKKIPG 321



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 26/245 (10%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
           +  G  H+  +  DG+++  G+N+ GQ  +G    +    P  VE L  I  K  A G++
Sbjct: 23  VDAGNGHAIVLDKDGKVFTMGRNNYGQ--IGDSTYEDHNTPYHVERLPKI--KIIARGYD 78

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL-IKELEGVKVKIAAAG 246
            S+A+   G+V +WG    G+LG    S+I          TP+L +   + + V+    G
Sbjct: 79  HSLAIDEQGRVWAWGRNNYGQLG----SAI-----PIDFNTPQLVVNHRDFISVE---GG 126

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTC 301
             H+  + E+G V+ +G     ++      H++ P  + K   +      ++V  GYHT 
Sbjct: 127 HWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTL 186

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GK 360
            L   GE+Y+WGSN+ G LG     + H  E+V+G      +  ++ GW H+ AI+E G+
Sbjct: 187 ALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEGL---QNIKSIAVGWHHSVAINENGE 243

Query: 361 ILTWG 365
           +  WG
Sbjct: 244 LFMWG 248



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 40/243 (16%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE--YTPRLIKELEGVKVKIAAA 245
            ++ +   GKV + G    G++G            ST E   TP  ++ L   K+KI A 
Sbjct: 29  HAIVLDKDGKVFTMGRNNYGQIG-----------DSTYEDHNTPYHVERLP--KIKIIAR 75

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HS  IDE GRV+ +G     ++          P L+        V  G +HT  L  
Sbjct: 76  GYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHRDFISVEGGHWHTVALKE 135

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHTAAISEGKIL 362
            G ++TWG N  G LG G+ +    P  V        +  V  VS G+   A    G++ 
Sbjct: 136 DGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTLALDKNGEVY 195

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCGFNHTGA 418
           +WG             +  G+LGH       H  I ++ E V+ LQ    ++ G++H+ A
Sbjct: 196 SWG------------SNDFGELGH------FHNVIQHYAEKVEGLQNIKSIAVGWHHSVA 237

Query: 419 LLE 421
           + E
Sbjct: 238 INE 240


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 17/323 (5%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG  + G+L +G  E  S   P   S  ++  +K ++CG  HTL +T+ G +Y+ G N++
Sbjct: 7   WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66

Query: 101 GQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LG S+     +   +  L  S    +V+Q + G   S  IT  GE++ WG+N  GQLG
Sbjct: 67  GELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRNDKGQLG 126

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            GK + +    P  ++ L+     Q   G    +A+T  G++ SWG    G+LG G   S
Sbjct: 127 RGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQLGLGSSHS 186

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                      TP+ I  L G+ +   A+G  HS  +  +  V+ +G  +  ++   +  
Sbjct: 187 F--------HDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGWGKNSFGQLGLNDEY 238

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P+L   L   +   + CG  HT  LT  G ++++G+   G LG  S      P+RV
Sbjct: 239 DKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRV 298

Query: 335 QGPFSESPVDQVSCGWKHTAAIS 357
                 S + QV+CG +HT A S
Sbjct: 299 ME-LMGSVISQVACGRRHTVAFS 320



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 129/284 (45%), Gaps = 34/284 (11%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG++++GQL +G      I  P +V  L  +  K+ + G + ++ VT  GK+ S G+   
Sbjct: 7   WGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEY 66

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LGH +  S     R+ S     L+  L  ++V  AA G   S  I   G V+ +G   
Sbjct: 67  GELGHSKPRS-----RAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWGRN- 120

Query: 267 VDKMLFQEGN----HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
            DK     G       R+P L+  L      ++ CG  H   LT  G L++WG N+ G L
Sbjct: 121 -DKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWGCNKYGQL 179

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW-----GWGGSHGTFSE 375
           G+GS    H   +        P+ Q++ G  H+       ILTW     GW         
Sbjct: 180 GLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSF------ILTWSRAVFGW--------- 224

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G +S GQLG  ++ D  HPT+     N K + +SCG +HT AL
Sbjct: 225 -GKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVAL 267



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LGL     +  P +C +     +  ++CG  HT+ LT+ G V++ G   FGQ
Sbjct: 224 WGKNSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQ 283

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITV-DGELYMWGKNSNGQLGLGKK 160
           LG +      L P R+  L   V+ Q++ G  H+ A +   G++Y +G   +GQLGLG  
Sbjct: 284 LGHNSTQNEIL-PKRVMELMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDT 342

Query: 161 AAKVIPIP 168
           +A+  P P
Sbjct: 343 SARNSPFP 350



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 28/162 (17%)

Query: 272 FQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG------ 323
           F E      P  +S+L   +  E+ CG  HT ++T  G+LY+ GSNE G LG        
Sbjct: 19  FSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRA 78

Query: 324 -SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            SIDV+     +    S   V Q + G + +  I+  G++ +WG             +  
Sbjct: 79  VSIDVV----ELVSSLSSMQVIQAAGGSEFSLVITTAGEVFSWG------------RNDK 122

Query: 382 GQLGHG--NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GQLG G  +  +   P ++        +Q++CG NH  AL +
Sbjct: 123 GQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTD 164


>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
          Length = 1048

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 170/362 (46%), Gaps = 35/362 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LGLGS E+             S+ ++A G  HT++LT T  VY+ G N+FGQ
Sbjct: 4   WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++      P  ++G   +E+  ++ G   S AI   G L+ WG++ NG+L   + +
Sbjct: 63  LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +  K+   S +   Q A G +  +A+T  G +LSWG+   G+LG G  SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HA 278
                  P +I  L    +    AG  HS  +  +G ++ +G     ++    GN     
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQL--GHGNSDSFQ 226

Query: 279 RRPSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P L+  L + E V    G  H+   T  G +++WG   NG LG  S+  +  P+++  
Sbjct: 227 SSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIM- 285

Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               + V Q+ CG +HT ++++ + L  G+          G +S  QLG  ND     P 
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDKRKLL-GF----------GLNSNNQLGTHNDTSARLPI 334

Query: 397 IV 398
            +
Sbjct: 335 TI 336



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 35/336 (10%)

Query: 92  VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y  G ND+GQLG+ SEN+  S  P  I    + V+ I++G  H+  +T   ++Y  G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG  K   +    P+ V           A G   S+A+   G +  WG   +G L 
Sbjct: 59  EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             Q+S           + P+L+ ++    V   A G  H   + E G +  +G     ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164

Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L         P++I+ L   P S+ +  G YH+ VL+  G L+TWG N  G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
              S  R+        V  V+ G +H+   +  G + +WG GG+            GQLG
Sbjct: 224 SFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN------------GQLG 271

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           H +  +   P  +         Q+ CG  HT +L +
Sbjct: 272 HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD 307



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  ++G+LG G+ +S +  P +        +  +A G  H++  T  G V++ G    G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++    +P +I  L    V QI  G  H+ ++T   +L  +G NSN QLG    
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327

Query: 161 AAKVIPIPTKV 171
            +  +PI   +
Sbjct: 328 TSARLPITIPI 338


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 38/398 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ G+LG+G  E +    V +A E + ++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 129

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               GK   + I IP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 130 KDDTGKTLRRDIVIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG----------- 176

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S   P  ++ LE  KVK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 177 QPWPPGDIKQIS--VPVRVQGLE--KVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTG 232

Query: 274 EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D     
Sbjct: 233 DTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKM 292

Query: 331 -PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P++V     E  V Q+SCG  H+ A++ +G++ ++G  G HG        + GQ     
Sbjct: 293 VPQKVNLLAGEDIV-QLSCGGTHSVALTQDGRMFSFG-RGDHGRLGYGKKVTTGQPVE-V 349

Query: 389 DVDYIHPTIVNFGENVK----ALQVSCGFNHTGALLEY 422
             D   P  ++  E  +    A  V+CG  HT A++E+
Sbjct: 350 PTDIPPPKSLSGTEEAEGHWIAKLVACGGRHTLAIVEW 387



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 143/343 (41%), Gaps = 42/343 (12%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + A G  + GQLGI  N       +  +LEP ++         +  G  +S AI  DG+L
Sbjct: 7   LIAWGAGEDGQLGIGINEEKEWVCVVNALEPYKVR-------SVVAGSRNSLAICDDGKL 59

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           + WG N  G LG   +  K   IP++V+ L+ +   QAA+G    +AV   G+  +WG  
Sbjct: 60  FTWGWNQRGTLGHPAET-KTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGGN 118

Query: 205 GSGRLGHGQE------SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             G+ G   E       ++   +       P+L+       V+  AAG  HS  +   G 
Sbjct: 119 EYGQCGEEPERKDDTGKTLRRDIVIPQRCAPKLV-------VRQVAAGGTHSVVLTREGH 171

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           V+ +G       + Q       P  +  L   + +  G +H   L   G L+ WG+NE G
Sbjct: 172 VWTWGQPWPPGDIKQ----ISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYG 227

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
            LG G       P  VQG    + VD  + GW  TA   +G++  WG  G HG       
Sbjct: 228 QLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWG-RGEHGRLG---- 282

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                 G  +    + P  VN       +Q+SCG  H+ AL +
Sbjct: 283 -----FGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTHSVALTQ 320


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 157/337 (46%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     L  L  +      VQI  G      +T +G++Y  G+ +
Sbjct: 3466 VFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACGEAT 3525

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG     V  +P ++  LS    K+ A+  G   S+A+T  GKV SWG G  G+L
Sbjct: 3526 NGRLGLGITTGTV-SVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDGKL 3584

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +V+  A G  HSA I  NG +Y +G     +
Sbjct: 3585 GH--------FSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGR 3635

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P  +  L +    +V CG     T  LT  G++Y+WG  + G LG G  
Sbjct: 3636 LGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGS 3695

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P  V     +  V Q+ CG + + A+++ G++ TWG G               +L
Sbjct: 3696 EGCNVPHEVDR-LRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYF------------RL 3742

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG D     P IV   +  K + V+ G  H  A+ +
Sbjct: 3743 GHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTD 3779



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 178/384 (46%), Gaps = 33/384 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG        +PV C A        L  GG  TLF +T  G V+ATG    G
Sbjct: 4466 WGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLV-GGEQTLFAVTAEGKVFATGYGAGG 4524

Query: 102  QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            +LG+  +E++ +  +   I  +  + + +++G  H  A++ +GE+Y WG+  +G+LG G 
Sbjct: 4525 RLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGN 4584

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            ++      P  ++ L G      A G   S  +T  G++ +WG G  GRLGHG       
Sbjct: 4585 RSP--CDRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGD------ 4636

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
               S  +  P+L++ L+  +V   A  +G   + CI ++  V+ +GD    K+     + 
Sbjct: 4637 ---SEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDG 4693

Query: 278  ARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +V 
Sbjct: 4694 CKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVS 4753

Query: 336  GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               ++  +D V+CG  H  A ++ G++ +W            G +  GQLG G       
Sbjct: 4754 ALQNKKVID-VACGSLHCVACTDTGEVFSW------------GDNDEGQLGDGTTNAIQR 4800

Query: 395  PTIVNFGENVKALQVSCGFNHTGA 418
            P +V      K  +V+CG  H+ A
Sbjct: 4801 PRLVASLLGKKINRVACGSAHSLA 4824



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 170/360 (47%), Gaps = 38/360 (10%)

Query: 72   SLKALAC----GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
            +L AL C    GG+ +LF +T+ G VYA G    G+LG+    G    P +I+ L + V+
Sbjct: 3493 NLSALRCVQIVGGSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVI 3552

Query: 127  Q---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            +   + +G  HS A+T DG+++ WG+  +G+LG   +       P  +E L     +  A
Sbjct: 3553 KKVAVHSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWN--CDKPRLIEALKSKRVRDIA 3610

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G   S A+T  G + +WG G  GRLGHG          +T++  P+ +K L   +V   
Sbjct: 3611 CGSSHSAAITSNGDLYTWGLGEYGRLGHGD---------NTTQLKPKQVKALAHERVVQV 3661

Query: 244  AAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
            A G     +  + + G+VY +GD    K+          P  + +L   +  ++ CG   
Sbjct: 3662 ACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQF 3721

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE- 358
            +  LT  G+++TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ 
Sbjct: 3722 SLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEG-LKGKKIVHVAVGALHCLAVTDS 3780

Query: 359  GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            G++  WG         ++ H   GQ G+G       P +V   E  K  +V+CG +H+ A
Sbjct: 3781 GQVFAWG---------DNDH---GQQGNGTTTVNRKPALVVL-EGYKISKVACGSSHSIA 3827



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 160/310 (51%), Gaps = 35/310 (11%)

Query: 2    LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRW- 60
            + R +T++++Y +K   K+    G       +T  + F+  WG GD G+LG     SRW 
Sbjct: 3540 VPRQITSLSQYVIK---KVAVHSGGRHSLALTTDGKVFS--WGEGDDGKLGHF---SRWN 3591

Query: 61   --RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
              +P +  A +   ++ +ACG +H+  +T  G +Y  GL ++G+LG  +N    L+P ++
Sbjct: 3592 CDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNT-TQLKPKQV 3650

Query: 119  SGLKKE-VVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
              L  E VVQ++ G   +   A+T +G++Y WG    G+LG G   ++   +P +V+ L 
Sbjct: 3651 KALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRG--GSEGCNVPHEVDRLR 3708

Query: 176  GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                 Q   G + S+A+T  G+V +WG G   RLGHG ++ +           P++++ L
Sbjct: 3709 DQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHV---------RKPQIVEGL 3759

Query: 236  EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA----RRPSLISKLPYS- 290
            +G K+   A G LH   + ++G+V+ +GD        Q+GN      R+P+L+    Y  
Sbjct: 3760 KGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHG----QQGNGTTTVNRKPALVVLEGYKI 3815

Query: 291  EEVVCGGYHT 300
             +V CG  H+
Sbjct: 3816 SKVACGSSHS 3825



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 39/352 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ +AC     L L++ G VY         +    ++  +L+ L   G  +EV++I++  
Sbjct: 577 VQQIACSERCCLILSKAGKVY---------MLYYTSLSPTLQQLNGFG-DREVIRIASHP 626

Query: 133 H--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
              H   +T DGE++ WG    G+LG G         P  +  LSG    +   G   SV
Sbjct: 627 DGKHYMGLTSDGEVFSWGNGDGGKLGHGDYQNH--EEPALITGLSGKQVAKICCGSSYSV 684

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFL 248
           A+T  G+V SWG G  GRLGHG          S  + TP L+K  +G ++   A  +G  
Sbjct: 685 ALTSNGEVYSWGKGNFGRLGHGS---------SEDQTTPMLLKFFKGHRIVDVACGSGDA 735

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSG 306
            +  + ++G VY +GD    K+     +  + P +I KL   +   V CG   +  LT  
Sbjct: 736 QTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKS 795

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G +YTWG  +N  LG G+ D    P++++   S   V  ++ G  H  AI+E   L +GW
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDGEL-YGW 853

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                     G +  GQLG+ +  ++  PT++   E    + V+CG   T A
Sbjct: 854 ----------GRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG +  +   P   ++  ++ +K +A   GG H+L LT  G V++ G  D 
Sbjct: 3522 GEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDD 3581

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG         +P  I  LK K V  I+ G  HS+AIT +G+LY WG    G+LG G 
Sbjct: 3582 GKLGHFSRWNCD-KPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGD 3640

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   +V+ L+     Q A G    Q++A+T  GKV SWG G  G+LG G     
Sbjct: 3641 NTTQLKP--KQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFGKLGRGG---- 3694

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P  +  L   KV     G   S  + ++G+V+ +G     ++      H
Sbjct: 3695 -----SEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAH 3749

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G+++ WG N++G  G G+  V   P  V 
Sbjct: 3750 VRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTTTVNRKPALVV 3809

Query: 336  GPFSESPVDQVSCGWKHTAA 355
                   + +V+CG  H+ A
Sbjct: 3810 --LEGYKISKVACGSSHSIA 3827



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 15/220 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
            WG G YGRLG G  E + RP +  A + + +  +ACG   A TL +T+   V++ G  D+
Sbjct: 4624 WGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDY 4683

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   + G  + P++I  L+ + V+++  G   S A+T  G +Y WGK    +LG G 
Sbjct: 4684 GKLGRGGSDGCKV-PMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG- 4741

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +   +  P KV  L        A G    VA T  G+V SWG    G+LG G  ++I  
Sbjct: 4742 -SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDGTTNAI-- 4798

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
                     PRL+  L G K+   A G  HS     N  V
Sbjct: 4799 -------QRPRLVASLLGKKINRVACGSAHSLAWSTNKAV 4831



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 139/335 (41%), Gaps = 81/335 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVI------------PI---------------------- 167
            G+++ WG N  GQLG G   AKV             PI                      
Sbjct: 4461 GQIWGWGHNHRGQLG-GVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATG 4519

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT++E +  +F K+ A+  G +  +A++  G+V SWG G  G+
Sbjct: 4520 YGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGK 4579

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I  L G +V   AAG  HSACI  NG +Y +G     
Sbjct: 4580 LGHGNRSPC---------DRPRVIDSLRGKEVVDIAAGGAHSACITANGELYTWGKGRYG 4630

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     RP L+  L      ++ CG     T  +T    +++WG  + G LG G 
Sbjct: 4631 RLGHGDSEDQPRPKLVEALKSYRVVDMACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4690

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P +++       V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4691 SDGCKVPMKIET-LQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYH------------R 4737

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            LGHG+D     P  V+  +N K + V+CG  H  A
Sbjct: 4738 LGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 15/270 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD G+LG G  ++   P + +      +  + CG ++++ LT  G VY+ G  +FG+
Sbjct: 643 WGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYSWGKGNFGR 702

Query: 103 L--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           L  G SE+    +      G +   V   +G   + A+T  G +Y WG    G+LG G  
Sbjct: 703 LGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGN 762

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                  P  +E L G    +   G + S+A+T  G V +WG G + RLGHG E      
Sbjct: 763 DG--CKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHA--- 817

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   P+ I+ L   KVK  A G LH   I E+G +Y +G     ++     ++   
Sbjct: 818 ------RHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTE 871

Query: 281 PSLISKLPYSEE--VVCGGYHTCVLTSGGE 308
           P+LI  +       V CG   T   TSGG+
Sbjct: 872 PTLIGGMEGKNIIGVACGPTQTFAWTSGGQ 901



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 130/285 (45%), Gaps = 26/285 (9%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +   ++ WG N   QLG G K +K I +PT  + LS +   Q   G +    VT  GKV 
Sbjct: 3462 IQTNVFCWGLNDKDQLG-GPKGSK-IKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVY 3519

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            + G   +GRLG G  +  +   R  +  +  +IK     KV + + G  HS  +  +G+V
Sbjct: 3520 ACGEATNGRLGLGITTGTVSVPRQITSLSQYVIK-----KVAVHSGG-RHSLALTTDGKV 3573

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
            + +G+    K+      +  +P LI  L      ++ CG  H+  +TS G+LYTWG  E 
Sbjct: 3574 FSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEY 3633

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFS 374
            G LG G       P++V+   +   V QV+CG +     A   EGK+ +WG     G F 
Sbjct: 3634 GRLGHGDNTTQLKPKQVKA-LAHERVVQVACGSRDAQTLALTDEGKVYSWG----DGDF- 3687

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                   G+LG G       P  V+   + K  Q+ CG   + AL
Sbjct: 3688 -------GKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLAL 3725


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNNEG 117

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL  K
Sbjct: 118 QLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGL--K 175

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++  +G   +G+LG   +  +LG 
Sbjct: 176 NVSNVCVPQQVTI--GKPVSWISCGYYHSAFVTTDGELYVFGEPENGKLGLPNQ--LLGN 231

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
            R     TP+L+ E+    +++A  G  H+  + EN  VY      FG   +   LF+  
Sbjct: 232 HR-----TPQLVSEIPEKVIQVACGG-EHTVVLTENA-VYTFGLGQFGQLGLGTFLFE-- 282

Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P +I  +       + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 283 --TSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 149/304 (49%), Gaps = 37/304 (12%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V +S G  HS+ +T + +LYM+G N+ GQLGLG K+A  I  PT V+ L     K AA G
Sbjct: 38  VHLSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSA--ISKPTCVKALKPEKVKLAACG 95

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKV 240
              ++  T GG V + G    G+LG G         ++ F   TSE+           K+
Sbjct: 96  RNHTLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFF--TSEH-----------KI 142

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K  +AG   SA + E+GR++++GD +  ++  +  ++   P  ++       + CG YH+
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHS 202

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISE 358
             +T+ GELY +G  ENG LG+   + L    R     SE P  V QV+CG +HT  ++E
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLP--NQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTE 260

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTG 417
             + T+G G              GQLG G  + +   P ++    +     +SCG NHT 
Sbjct: 261 NAVYTFGLG------------QFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTA 308

Query: 418 ALLE 421
            + +
Sbjct: 309 LITD 312



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 166/348 (47%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +    VI   T    +     KQ + G   S 
Sbjct: 99  TLVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKI-----KQLSAGSNTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  G++  WG    G++G    S++           P+ +    G  V   + G+ HS
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLKNVSNVC---------VPQQV--TIGKPVSWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y+FG+    K+       GNH R P L+S++P    +V CGG HT VLT  
Sbjct: 203 AFVTTDGELYVFGEPENGKLGLPNQLLGNH-RTPQLVSEIPEKVIQVACGGEHTVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +YT+G  + G LG+G+     S  +V     +  +  +SCG  HTA I++ G + T+G
Sbjct: 262 A-VYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDIGLMYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
             G HG            LG  N  ++  PT+  NF   +  L V+CG
Sbjct: 321 -DGRHGKLG---------LGLENFTNHFIPTLCSNFLRFIVKL-VACG 357


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 179/379 (47%), Gaps = 41/379 (10%)

Query: 50  RLGLGSLESRWRP--VVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGI 105
           R G G L    RP  V  + F K +    A  G       + +TG V+      FG+   
Sbjct: 6   RWGTGGLGQYLRPNRVAPAVFPKQAQIPFAAFGMAEPESLVPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP  I       +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPSDI-------IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T+ GELYT+G  ENG LG+ +  +++  SP+RV G      V
Sbjct: 226 VGKPISWISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG--IPDKV 283

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 402
            QV+CG  HT  ++E  +  +G G              GQLG G  + +   P I++  +
Sbjct: 284 IQVACGGGHTVVLTEKVVYAFGLG------------QFGQLGLGTFLFETSEPKIIDRIK 331

Query: 403 NVKALQVSCGFNHTGALLE 421
           + K   +SCG NHT  + +
Sbjct: 332 DQKISHISCGENHTALMTD 350



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 160/329 (48%), Gaps = 41/329 (12%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K D+ +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDVPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE--------NIGYSLEPLRISGL 121
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +         IG+   P  I   
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGF-FTPSDI--- 179

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G     
Sbjct: 180 ---IKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISW 232

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G+  S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    ++
Sbjct: 233 ISCGYYHSAFVTTDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPDKVIQ 285

Query: 242 IAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVV 294
           +A  G  H+  + E   VY      FG   +   LF+       P +I ++   +   + 
Sbjct: 286 VACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIDRIKDQKISHIS 339

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 340 CGENHTALMTDIGLMYTFGDGRHGKLGLG 368



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 158/349 (45%), Gaps = 43/349 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPSDIIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVC---------IPHEV--TVGKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTTDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPDKVIQVACGGGHTVVLTE 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA +++ G + T+
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTF 357

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
           G  G HG            LG  N  +   PT+  NF +    L ++CG
Sbjct: 358 G-DGRHGKLG---------LGMENFTNQFFPTLCSNFLKFTVQL-IACG 395



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 109/252 (43%), Gaps = 45/252 (17%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G     PS I K     ++ 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIGFFT--PSDIIK-----QLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V       P+  +SCG+ H+A
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT---VGKPISWISCGYYHSA 241

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSC 411
            ++ +G++ T+G                G+LG  N   +++  P  V  G   K +QV+C
Sbjct: 242 FVTTDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPDKVIQVAC 288

Query: 412 GFNHTGALLEYV 423
           G  HT  L E V
Sbjct: 289 GGGHTVVLTEKV 300


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 149/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K +ACG  HTL  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDG 117

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  +  P+     + ++ Q+S G + S+A+T +GEL+MWG NS GQ+GL  K
Sbjct: 118 QLGLGDTEGRNTFYPISFFTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGL--K 175

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++ ++G   +G+LG  +E  I   
Sbjct: 176 NVTNVCVPHQVTI--GKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLI--- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +  TP+L+  +    +++A  G  H+  + E   VY      FG   +   +F+  
Sbjct: 231 ----NHKTPQLVTRIPEKVIQVACGGG-HTVVLTET-IVYTFGLGQFGQLGLGTFIFE-- 282

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P  I  +   +   + CG  HT ++T  G +YT+G    G LG+G
Sbjct: 283 --TSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDGRYGKLGLG 330



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 146/298 (48%), Gaps = 21/298 (7%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+ ++ G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTIN-KPTCVKALKPEKVKYVACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +   T +G +Y  G N++GQLGLG    +    P      S    KQ + G   S A+T 
Sbjct: 99  TLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF-FTSQHKIKQLSAGSNTSAALTE 157

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++  WG    G++G    +++           P  +    G  +   + G+ HSA + 
Sbjct: 158 NGELFMWGDNSEGQIGLKNVTNVC---------VPHQV--TIGKPISWISCGYYHSAFVT 206

Query: 255 ENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELY 310
            +G +Y FG+    K+   E    NH + P L++++P    +V CGG HT VLT    +Y
Sbjct: 207 MDGELYTFGECENGKLGLPEELLINH-KTPQLVTRIPEKVIQVACGGGHTVVLTETI-VY 264

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           T+G  + G LG+G+     S  +      +  +  +SCG  HTA I+E G++ T+G G
Sbjct: 265 TFGLGQFGQLGLGTFIFETSEPKAIEYIKDHKISSISCGENHTALITELGRMYTFGDG 322



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 150/324 (46%), Gaps = 30/324 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 17  FGKTKFAENI-----PSKFWFKNDVPTYLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    I  PT V+ L     K  A G   ++  T  G V + G    G+LG G       
Sbjct: 72  KT--TINKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNT 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  +AG   SA + ENG ++++GD +  ++  +   +  
Sbjct: 130 FY-PISFFTSQH-------KIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPF 338
            P  ++       + CG YH+  +T  GELYT+G  ENG LG+   + + H   ++    
Sbjct: 182 VPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPEELLINHKTPQLVTRI 241

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 397
            E  V QV+CG  HT  ++E  + T+G G              GQLG G  + +   P  
Sbjct: 242 PEK-VIQVACGGGHTVVLTETIVYTFGLG------------QFGQLGLGTFIFETSEPKA 288

Query: 398 VNFGENVKALQVSCGFNHTGALLE 421
           + + ++ K   +SCG NHT  + E
Sbjct: 289 IEYIKDHKISSISCGENHTALITE 312



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 44/264 (16%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +PT + C           G E +  VTG  K+  +G+   G+LG G +++I         
Sbjct: 36  VPTYLSC-----------GDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTI--------- 75

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHARRP-SL 283
             P  +K L+  KVK  A G  H+    E G VY  G     ++     EG +   P S 
Sbjct: 76  NKPTCVKALKPEKVKYVACGRNHTLVSTEEGNVYATGGNNDGQLGLGDTEGRNTFYPISF 135

Query: 284 ISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
            +     +++  G   +  LT  GEL+ WG N  G +G+ ++  +  P +V       P+
Sbjct: 136 FTSQHKIKQLSAGSNTSAALTENGELFMWGDNSEGQIGLKNVTNVCVPHQVT---IGKPI 192

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVN 399
             +SCG+ H+A ++ +G++ T+G                G+LG   ++   H T   +  
Sbjct: 193 SWISCGYYHSAFVTMDGELYTFG------------ECENGKLGLPEELLINHKTPQLVTR 240

Query: 400 FGENVKALQVSCGFNHTGALLEYV 423
             E  K +QV+CG  HT  L E +
Sbjct: 241 IPE--KVIQVACGGGHTVVLTETI 262



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 17/83 (20%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT----G 96
           +G+G YG+LGLG  +  +++ P +C  F +  ++ +ACGG H +       ++AT     
Sbjct: 319 FGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCHMV-------IFATPRLGS 371

Query: 97  LNDFGQLGISENIGYSLEPLRIS 119
            N+F    +S+   YS  PL  S
Sbjct: 372 ANEF----VSDEPNYSYFPLSSS 390


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 161/364 (44%), Gaps = 29/364 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S+ +   PV+ S  +  +   ++ G  H+L +   G  YA G N  G+
Sbjct: 73  WGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHSLAVGSDGNAYAWGRNTDGR 132

Query: 103 LGISENIGYSLEPLRISGLKKEVVQIS---TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   + G S+  L  +G     V IS    G  HS A+  +G++Y WG N +GQLG G 
Sbjct: 133 LGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGT 192

Query: 160 KAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             A  +P+      + +G+   Q + G   S+A+   GK  +WG    G+LG G  S   
Sbjct: 193 TLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSIS--- 249

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
              R+ +   P L+    GV     +AG LHS  +  +G+ Y +G+    ++       +
Sbjct: 250 ---RTPA---PALVSAPAGVSFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSS 303

Query: 279 RRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P L+S +      +V  G  H+  + + G  Y WG N NG LG  +I     P  V  
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTA 363

Query: 337 PFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P   +   ++  G  H+  A S+    TW            G +S GQLG+G     + P
Sbjct: 364 PDGVT-FTRIEAGGLHSLTAASDENTYTW------------GANSFGQLGNGTSDGSLVP 410

Query: 396 TIVN 399
             ++
Sbjct: 411 VAIS 414



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 155/371 (41%), Gaps = 61/371 (16%)

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV 126
           +F   S+ AL+      L +  +G  +A     FG        G +     +SG+   VV
Sbjct: 3   SFRVASVVALSA-----LLVGMSGSAFAAPAETFGS-------GPTAGGTTVSGVLPGVV 50

Query: 127 --QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
             Q+S G +HS A+  DG +Y WG NS+GQLG        +P+   V    G+   Q + 
Sbjct: 51  FTQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPV--LVSTPDGVTFTQVSA 108

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE---LEGVKVK 241
           G + S+AV   G   +WG    GRLG+G          ST    P L+       GV + 
Sbjct: 109 GADHSLAVGSDGNAYAWGRNTDGRLGNGT---------STGSSVPLLVSAGAVPSGVTIS 159

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----------- 290
              AG  HS  +  NG +Y +G         + G      +L S +P             
Sbjct: 160 QVMAGGFHSLAVGSNGDIYSWGYN-------RSGQLGDGTTLASSVPLKVSAGAVPAGVT 212

Query: 291 -EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             +V  G  H+  + S G+ Y WG    G LGIGSI    +P  V  P   S   QVS G
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVS-FTQVSAG 271

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H+ A+ S+GK   W            G++  GQLG+      + P +V+    +   Q
Sbjct: 272 DLHSLAVGSDGKAYAW------------GNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQ 319

Query: 409 VSCGFNHTGAL 419
           VS G +H+ A+
Sbjct: 320 VSAGADHSLAI 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 153/346 (44%), Gaps = 25/346 (7%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           ++ G  H+L +   G +YA G N  GQLG +  +  S+  L  +       Q+S G  HS
Sbjct: 54  VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL-SGIFTKQAALGFEQSVAVTG 194
            A+  DG  Y WG+N++G+LG G      +P+      + SG+   Q   G   S+AV  
Sbjct: 114 LAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAVGS 173

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G + SWG   SG+LG G   +    L+ ++   P       GV     +AG  HS  I 
Sbjct: 174 NGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP------AGVTFSQVSAGDRHSLAIG 227

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYT 311
            NG+ Y +G+    ++     +    P+L+S  P      +V  G  H+  + S G+ Y 
Sbjct: 228 SNGKTYAWGEARGGQLGIGSISRTPAPALVSA-PAGVSFTQVSAGDLHSLAVGSDGKAYA 286

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           WG+N++G LG  +     +P  V  P     V QVS G  H+ AI ++G    WG     
Sbjct: 287 WGNNDSGQLGNATTTSSLAPVLVS-PMGGLAVTQVSAGADHSLAIGADGNAYAWGL---- 341

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                   +  GQLG+        P +V   + V   ++  G  H+
Sbjct: 342 --------NVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHS 379


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 180/406 (44%), Gaps = 55/406 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E        +A +  ++ A+  G  ++L +   G ++  G N  G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135

Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
              G +A  + IPIP +  C   +  +Q A G   SV +T  G V +WG           
Sbjct: 136 KEDGTRALRRDIPIPQR--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE   VK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G     H  
Sbjct: 239 DTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 298

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V+    E  + QVSCG  H+ A++ +G++ ++G  G H           G+LG+G  
Sbjct: 299 PQKVELLAGED-IIQVSCGGTHSVALTRDGRMFSYG-RGDH-----------GRLGYGRK 345

Query: 390 VDYIHPTIV------------NFGENVKALQVSCGFNHTGALLEYV 423
           V   HP  V            + G   +A  V+CG  HT A+  + 
Sbjct: 346 VTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATWT 391



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 146/333 (43%), Gaps = 25/333 (7%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQ-ISTGYHHSSAITVDGELYMW 147
            V A G  + GQLG+    GY  E     ++ L    V  +  G  +S AI  DG L+ W
Sbjct: 12  AVLAWGSGEDGQLGMG---GYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  G LG   +  K    P  V+ L+G+   QAA+G    +AV   G+  +WG    G
Sbjct: 69  GWNQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G   E    G  R+     P   +    +KV+  AAG  HS  + ++G V+ +G    
Sbjct: 128 QCGEEAERKEDG-TRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              + Q       P  +  L   + +  G +H   LT  G L+ WG+NE G LG G    
Sbjct: 187 PGDIKQ----ISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQP 242

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              P RV+G    S VD  + GW  TA   EG++  WG  G H           G+LG G
Sbjct: 243 RSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWG-RGEH-----------GRLGFG 290

Query: 388 ND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +D   ++ P  V        +QVSCG  H+ AL
Sbjct: 291 DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVAL 323


>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
          Length = 1199

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 169/360 (46%), Gaps = 31/360 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LGLGS E+             S+ ++A G  HT++LT T  VY+ G N+FGQ
Sbjct: 4   WGKNDYGQLGLGS-ENMLISCPSPIDANQSVISIASGLRHTVYLTSTRKVYSCGSNEFGQ 62

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  ++      P  ++G   +E+  ++ G   S AI   G L+ WG++ NG+L   + +
Sbjct: 63  LGQQKS---QCRPSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELMCKQDS 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +  K+   S +   Q A G +  +A+T  G +LSWG+   G+LG G  SS + FL
Sbjct: 120 LHEPKLLDKIMHWSVV---QVACGAQHCIALTEEGTILSWGSNTQGQLGLG--SSEIEFL 174

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-QEGNHARR 280
                  P +I  L    +    AG  HS  +  +G ++ +G     ++      +    
Sbjct: 175 E------PTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQSS 228

Query: 281 PSLISKLPYSEEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P L+  L + E V    G  H+   T  G +++WG   NG LG  S+  +  P+++    
Sbjct: 229 PRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNGQLGHNSMANVTQPKKIMELM 288

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             + V Q+ CG +HT ++++ + L  G+          G +S  QLG  ND     P  +
Sbjct: 289 GTT-VCQICCGRRHTISLTDKRKL-LGF----------GLNSNNQLGTHNDTSARLPITI 336



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 146/336 (43%), Gaps = 35/336 (10%)

Query: 92  VYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           +Y  G ND+GQLG+ SEN+  S  P  I    + V+ I++G  H+  +T   ++Y  G N
Sbjct: 1   MYGWGKNDYGQLGLGSENMLISC-PSPIDA-NQSVISIASGLRHTVYLTSTRKVYSCGSN 58

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             GQLG  K   +    P+ V           A G   S+A+   G +  WG   +G L 
Sbjct: 59  EFGQLGQQKSQCR----PSLVTGFGAEEIFHVAAGDFFSIAIAESGLLFGWGRSLNGELM 114

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             Q+S           + P+L+ ++    V   A G  H   + E G +  +G     ++
Sbjct: 115 CKQDSL----------HEPKLLDKIMHWSVVQVACGAQHCIALTEEGTILSWGSNTQGQL 164

Query: 271 -LFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L         P++I+ L   P S+ +  G YH+ VL+  G L+TWG N  G LG G+ D
Sbjct: 165 GLGSSEIEFLEPTIIASLNAFPISQ-ICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSD 223

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
              S  R+        V  V+ G +H+   +  G + +WG GG+            GQLG
Sbjct: 224 SFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGN------------GQLG 271

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           H +  +   P  +         Q+ CG  HT +L +
Sbjct: 272 HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTD 307



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 3/131 (2%)

Query: 43  WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  ++G+LG G+ +S +  P +        +  +A G  H++  T  G V++ G    G
Sbjct: 209 WGKNNWGQLGHGNSDSFQSSPRLVKTLRHQEVVFVAMGEEHSVCRTRNGGVFSWGHGGNG 268

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG   ++    +P +I  L    V QI  G  H+ ++T   +L  +G NSN QLG    
Sbjct: 269 QLG-HNSMANVTQPKKIMELMGTTVCQICCGRRHTISLTDKRKLLGFGLNSNNQLGTHND 327

Query: 161 AAKVIPIPTKV 171
            +  +PI   +
Sbjct: 328 TSARLPITIPI 338


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+T +G++Y  G+ +
Sbjct: 1770 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEAT 1829

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 1830 NGRLGLGLSSG-TIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1888

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 1889 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939

Query: 270  MLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 1999

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2000 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2046

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ E
Sbjct: 2047 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTE 2083



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +IS L   VV+   + +G  H
Sbjct: 1808 GGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRH 1867

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1868 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1925

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 1926 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVVQVACGSRDAQTLA 1976

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 1977 LTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2036

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A++E G++  WG    
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWG---- 2091

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2092 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 164/350 (46%), Gaps = 36/350 (10%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 2803 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 2860

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GELY WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 2861 HCLALSSEGELYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 2918

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L++ L+G +V   A  +G   + 
Sbjct: 2919 ASGELYTWGKGRYGRLGHGD---------SEDQLKPKLVEALQGHRVIDVACGSGDAQTL 2969

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 2970 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 3029

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            YTWG  +   LG GS D +  P +VQG      V  ++ G  H    +E G++ TW    
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 3084

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                    G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 3085 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 132/291 (45%), Gaps = 18/291 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G +Y+ G  + G+LG   N      P  I  L+  EVV I+ G  
Sbjct: 2854 AVNSGGKHCLALSSEGELYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 2912

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
            HS+ IT  GELY WGK   G+LG G    ++ P    VE L G  +       G  Q++ 
Sbjct: 2913 HSACITASGELYTWGKGRYGRLGHGDSEDQLKP--KLVEALQGHRVIDVACGSGDAQTLC 2970

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I  L G+ V     G   S 
Sbjct: 2971 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMKIDSLTGLGVVKVECGSQFSV 3021

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP  +  L   +   +  G  H    T  GE+
Sbjct: 3022 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 3081

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            YTWG N+ G LG G+ + +  P R+        +++V+CG  HT A S  K
Sbjct: 3082 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 3131



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    SA   + +K +A   GG H + LT  G V++ G  D
Sbjct: 1826 GEATNGRLGLG-LSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 1884

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 1885 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 1943

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 1944 DNTTQLRPKLVKV--LLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGG--- 1998

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 1999 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 2052

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G+++ WG N++G  G G+  V   P  V
Sbjct: 2053 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLV 2112

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILT 363
            QG      + +V+CG  H+ A +   + T
Sbjct: 2113 QG-LEGQKITRVACGSSHSVAWTTVDVTT 2140



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G +Y  G   +G+
Sbjct: 2874 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGR 2933

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 2934 LGHGDSED-QLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 2991

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 2992 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 3048

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 3049 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 3101

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 3102 RPRLVAALQGKKINRVACGSAHT 3124



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 1880 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 1939

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   VVQ++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 1940 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG-- 1997

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 2054

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + E G+V+ +GD        Q+GN    
Sbjct: 2055 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHG----QQGNGTTT 2104

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 2105 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2135



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  S  +  ++K     KV + + G  H+  +  
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 1873

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 1874 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 1934 LGEYGRLGHGDNTTQLRPKLVKVLLGHRVV-QVACGSRDAQTLALTDEGMVFSWG----D 1988

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 1989 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2029



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 136/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 2763 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 2821

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F ++ A+  G +  +A++  G++ SWG    G+
Sbjct: 2822 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGK 2881

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G +Y +G     
Sbjct: 2882 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKGRYG 2932

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 2933 RLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 2992

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 2993 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3039

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3040 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3071



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 3032 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 3091

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 3092 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 3126


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGL +  +  +P    A +   +   +CG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  +   P K++   G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +      P+ +  L G KVKI + G  H+  + E   VY FG     ++     +F+  
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              + P  +  L       V CG  HT V+T  G LYT+G   +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      +   IS G  H+  +T +G+LY++G N+ GQLGL  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDKPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       A+ G   ++  T  GK+ S G    G+LG G  S    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   T   IK+L        +AG   SA +  +G+++++GD +  ++  ++     
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
            P  I        + CG YH+  +T  GELYT+G  ENG LG+ S  +     P+RV G 
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGL 243

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 396
             +  V  VSCG +HT A++E ++ T+G G              GQLGHG  + +   P 
Sbjct: 244 SGK--VKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFIFETQLPK 289

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V+       L V+CG NHT  + +
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITD 314



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 26/304 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  S G +H
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
           +   T  G+LY  G NS GQLGLG  + +     T  + +S   T    KQ + G   S 
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G+LG  +E+            TP+ I    G  +   + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
           A + ++G +Y FG+    K+          ++P  +S L    ++V CGG HT  +T   
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
           E+YT+G  + G LG G+        +     ++  +  V+CG  HTA I++  +L     
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGD 323

Query: 368 GSHG 371
           G HG
Sbjct: 324 GRHG 327



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L       V+AT     
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373

Query: 101 GQLGISENI 109
            ++ I++ +
Sbjct: 374 SEMMINDEL 382


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 157/327 (48%), Gaps = 37/327 (11%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K+DI +    G     I++   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 54  SKFWFKKDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 111

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
              +K +ACG  HTL LT  G VYATG N+ GQLG+    E   + L     S  K  + 
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 169

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           Q+S G + S+A+T DGEL+MWG NS GQ+GL       +P    V    G      + G+
Sbjct: 170 QLSAGSNTSAALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTV----GKPISWISCGY 225

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S  VT  G++ ++G   SG+LG       L      +   P+L+  +    +++A  G
Sbjct: 226 YHSAFVTTEGELYTFGEPESGKLG-------LPPKLLVNHKVPQLVPGISEKVIQVACGG 278

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGN--------HARRPSLISKLPYSE--EVVCG 296
             H+  + E   VY FG       L Q G             P +I  +   +   V CG
Sbjct: 279 G-HTVVLTEKA-VYTFG-------LGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCG 329

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIG 323
             HT ++T  G LYT+G   +G LG+G
Sbjct: 330 ENHTALITESGLLYTFGDGRHGKLGLG 356



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 166/344 (48%), Gaps = 47/344 (13%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ++G V+      FG+   +ENI     P +    K   + +S G  H++  T + +L+
Sbjct: 34  IEDSGAVFT-----FGKTKFAENI-----PSKFWFKKDIPISLSCGDEHTAITTGNNKLF 83

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG KA   +  PT ++ L     K  A G   ++ +TGGGKV + G   
Sbjct: 84  MFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNHTLVLTGGGKVYATGGNN 141

Query: 206 SGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G+LG G         ++ F   TS++           K+K  +AG   SA + E+G ++
Sbjct: 142 EGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGELF 188

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           ++GD +  ++  Q   +   P  ++       + CG YH+  +T+ GELYT+G  E+G L
Sbjct: 189 MWGDNSEGQIGLQNITNMCVPHQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKL 248

Query: 321 GIG-SIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
           G+   + V H  P+ V G  SE  V QV+CG  HT  ++E  + T+G G           
Sbjct: 249 GLPPKLLVNHKVPQLVPG-ISEK-VIQVACGGGHTVVLTEKAVYTFGLG----------- 295

Query: 379 SSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              GQLG G    +   P ++   ++ K   V CG NHT  + E
Sbjct: 296 -QFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALITE 338



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 161/358 (44%), Gaps = 45/358 (12%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+K    +L+CG  HT   T    ++  G N++GQLG+      + +P  I  LK E V+
Sbjct: 58  FKKDIPISLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVN-KPTCIKALKPEKVK 116

Query: 128 -ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
            ++ G +H+  +T  G++Y  G N+ GQLGLG    +          L   FT     KQ
Sbjct: 117 FVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDER------SAFHLISFFTSQHKIKQ 170

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  G++  WG    G++G             T+   P  +    G  + 
Sbjct: 171 LSAGSNTSAALTEDGELFMWGDNSEGQIG---------LQNITNMCVPHQV--TVGKPIS 219

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---C 295
             + G+ HSA +   G +Y FG+    K+        NH + P L+  +  SE+V+   C
Sbjct: 220 WISCGYYHSAFVTTEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVAC 276

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           GG HT VLT    +YT+G  + G LG+G+     S  +V     +  +  V CG  HTA 
Sbjct: 277 GGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTAL 335

Query: 356 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
           I+E  +L     G HG            LG  N  +   PT+  NF + +  L V+CG
Sbjct: 336 ITESGLLYTFGDGRHGKLG---------LGMENFANQFLPTLCSNFLKYIVHL-VACG 383



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 127/291 (43%), Gaps = 52/291 (17%)

Query: 147 WG-KNSNGQLGLGK-KAAKVIP--------IPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           WG ++S      GK K A+ IP        IP  + C           G E +   TG  
Sbjct: 32  WGIEDSGAVFTFGKTKFAENIPSKFWFKKDIPISLSC-----------GDEHTAITTGNN 80

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           K+  +G+   G+LG G ++++           P  IK L+  KVK  A G  H+  +   
Sbjct: 81  KLFMFGSNNWGQLGLGSKATV---------NKPTCIKALKPEKVKFVACGRNHTLVLTGG 131

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWG 313
           G+VY  G     ++   + +      LIS        +++  G   +  LT  GEL+ WG
Sbjct: 132 GKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTEDGELFMWG 191

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT 372
            N  G +G+ +I  +  P +V       P+  +SCG+ H+A ++ EG++ T+G   S   
Sbjct: 192 DNSEGQIGLQNITNMCVPHQVT---VGKPISWISCGYYHSAFVTTEGELYTFGEPES--- 245

Query: 373 FSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    G+LG      V++  P +V  G + K +QV+CG  HT  L E
Sbjct: 246 ---------GKLGLPPKLLVNHKVPQLVP-GISEKVIQVACGGGHTVVLTE 286



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P +CS F K+ +  +ACGG H L       V+AT     
Sbjct: 345 FGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHML-------VFAT----- 392

Query: 101 GQLGISENI 109
            +LG++E+I
Sbjct: 393 PRLGMAEDI 401


>gi|403370898|gb|EJY85318.1| hypothetical protein OXYTRI_16821 [Oxytricha trifallax]
          Length = 821

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 55/346 (15%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTL-FLTETGCVYATGLNDFGQLGISENIGYSLEP---- 115
           +P +  A E   +  L+CG +H+  +  E+G VY  GL   G+LG +EN G   EP    
Sbjct: 150 QPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLG-NENEGVVQEPQVLE 208

Query: 116 -LRIS-GLKKEVVQISTGYHHSSAI----------TVDGELYMWGKNSNGQLGLGKKAA- 162
            L+I+  +K +V+QIS G +H+ A+          T   +L++WG N   QLG+  +A  
Sbjct: 209 CLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGMDNQADG 268

Query: 163 ---------------KVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSWGAG 204
                          ++ P P + +  +  ++ Q       +  S A+T  G V +WG+G
Sbjct: 269 NNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNVYTWGSG 328

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             GRLG         ++    +  P+++KEL G +V   + G+ H A I E G+V+ +G 
Sbjct: 329 EFGRLG---------YMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSWG- 378

Query: 265 RAVDKML----FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           R ++  L        +  R  S +  + +  ++ CG  HT  LT+ GE+Y+WG  +    
Sbjct: 379 RGINGQLGHGSVLNEDQVRPVSALQNI-HIIDISCGESHTLALTNKGEVYSWGGGQ--LG 435

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
            +G  D L     ++    E  + Q+S G +H++A++ +GK+ TWG
Sbjct: 436 QLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALTDDGKLFTWG 481



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 140/317 (44%), Gaps = 50/317 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFL----------T 87
           WG G  GRLG  +      P V    +     K  +  ++CG  HTL L          T
Sbjct: 185 WGLGLNGRLGNENEGVVQEPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGET 244

Query: 88  ETGCVYATGLNDFGQLGISE---------------NIGYSLEPLRIS------GLKKEVV 126
               ++  G ND  QLG+                 ++ + L+P              +++
Sbjct: 245 SQNKLFVWGNNDKLQLGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLI 304

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALG 185
            +   Y++S+A+T +G +Y WG    G+ G LG    K  P P  ++ L+G    + +LG
Sbjct: 305 GVHASYYYSAALTSNGNVYTWGS---GEFGRLGYMDIKKQPQPKVLKELTGFQVTRISLG 361

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
           +    A+T  G+V SWG G +G+LGHG   S+L      +E   R +  L+ + +   + 
Sbjct: 362 YYHGAAITEQGQVFSWGRGINGQLGHG---SVL------NEDQVRPVSALQNIHIIDISC 412

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-EEVVCGGYHTCVLT 304
           G  H+  +   G VY +G   + ++   +      P  ++ L  +  ++  G  H+  LT
Sbjct: 413 GESHTLALTNKGEVYSWGGGQLGQLGHGDFLRQSLPIKVANLEDNIAQISAGKRHSSALT 472

Query: 305 SGGELYTWGSNENGCLG 321
             G+L+TWGSNE G LG
Sbjct: 473 DDGKLFTWGSNEYGQLG 489



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 161/357 (45%), Gaps = 73/357 (20%)

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGE--LYMWGKNSNGQLG----------LGKKA 161
           P R+  L+K  + Q+  G   +  IT   E  ++ WG N N +LG          +   +
Sbjct: 85  PERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSS 144

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHG-----QES 215
            +++  PT V+ L        + G   S A +   G V  WG G +GRLG+      QE 
Sbjct: 145 IQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQEP 204

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----NGRVYIFGDRAVDKML 271
            +L  L+   E   ++++   G    +A    +     +E      +++++G+   DK+ 
Sbjct: 205 QVLECLKIAMEIKMKVLQISCGENHTLA---LIQMPPQNEGETSQNKLFVWGNN--DKLQ 259

Query: 272 F-----QEGNH-----ARRPSLISKLP------------YSEEVV---CGGYHTCVLTSG 306
                  +GN+     AR  S+  +L             YS +++      Y++  LTS 
Sbjct: 260 LGMDNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSN 319

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
           G +YTWGS E G LG   +D+   P+ +V    +   V ++S G+ H AAI+E G++ +W
Sbjct: 320 GNVYTWGSGEFGRLGY--MDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITEQGQVFSW 377

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGN--DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G              GQLGHG+  + D + P  V+  +N+  + +SCG +HT AL
Sbjct: 378 GRG------------INGQLGHGSVLNEDQVRP--VSALQNIHIIDISCGESHTLAL 420



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 30/149 (20%)

Query: 292 EVVCGGYHTCVLTSGGE--LYTWGSNENGCLG------------IGSIDVLHSPERVQGP 337
           +V+CG   T  +T   E  +++WGSN+N  LG              SI ++  P  V+  
Sbjct: 98  QVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSSSSIQIVKQPTIVKA- 156

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
                +D +SCG  H+ A S    L +GWG              G+LG+ N+     P +
Sbjct: 157 LENQKIDGLSCGTSHSFAWSNESGLVYGWG----------LGLNGRLGNENEGVVQEPQV 206

Query: 398 -----VNFGENVKALQVSCGFNHTGALLE 421
                +     +K LQ+SCG NHT AL++
Sbjct: 207 LECLKIAMEIKMKVLQISCGENHTLALIQ 235



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/300 (23%), Positives = 119/300 (39%), Gaps = 56/300 (18%)

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGK--VLSWGAGGSGRLGHGQESSILGFLRS 223
           P P +V  L      Q   G +Q+  +T   +  V SWG+  + +LGH         + S
Sbjct: 83  PRPERVLALEKYNINQVICGSDQTFCITKSPENHVFSWGSNQNAKLGHSYYKPSPNNVSS 142

Query: 224 TS---EYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           +S      P ++K LE  K+   + G  HS A  +E+G VY +G     ++  +     +
Sbjct: 143 SSIQIVKQPTIVKALENQKIDGLSCGTSHSFAWSNESGLVYGWGLGLNGRLGNENEGVVQ 202

Query: 280 RPSLISKLPYSEEV-------VCGGYHTCVL----------TSGGELYTWGSNENGCLGI 322
            P ++  L  + E+        CG  HT  L          TS  +L+ WG+N+   LG+
Sbjct: 203 EPQVLECLKIAMEIKMKVLQISCGENHTLALIQMPPQNEGETSQNKLFVWGNNDKLQLGM 262

Query: 323 -----GSIDVLHSPERVQGPFSESP------VDQ---------VSCGWKHTAAI-SEGKI 361
                G+ + + S   +  P    P       D          V   + ++AA+ S G +
Sbjct: 263 DNQADGNNEDMQSAREISVPHQLDPDPFQHDTDNKNYSNQLIGVHASYYYSAALTSNGNV 322

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            TWG G              G+LG+ +      P ++      +  ++S G+ H  A+ E
Sbjct: 323 YTWGSG------------EFGRLGYMDIKKQPQPKVLKELTGFQVTRISLGYYHGAAITE 370


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 171/387 (44%), Gaps = 57/387 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+   R  PV  ++ +     +   G  H L L   G V+A G N +GQ
Sbjct: 224 WGDNRYGQLGDGTTVRRITPVQVASLDSVVSVS--VGAYHALALRADGTVWAWGHNAYGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N   + +P+ +S    +V  +  G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTNTQRT-QPVSVS--LTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+P +     G+       G+  SVA+   G   SWG    G+LG            
Sbjct: 339 S--PLPLQAGMTGGV---TLVAGYRHSVALGADGTAWSWGDNVFGQLGD----------- 382

Query: 223 STSEYTPRLIK-ELEGVKVKIAAA--GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             + + PR+   ++ G+ +  A A  G LH+  +  NGR++ +GD        Q+G    
Sbjct: 383 --TTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDN-------QQGQLGN 433

Query: 280 RPSLISKLPYSEEV-----VCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                S LP    +     V  GY HT  L S G ++TWG N  G LG G++    +P +
Sbjct: 434 GTQQDSSLPLPVNLTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDRPTPVQ 493

Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++ G  H+ A+ S G +  WG             +  GQLG G  VD 
Sbjct: 494 VVG---LGGVTAIATGDNHSLALRSNGTVWAWG------------FNRYGQLGDGTAVDR 538

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGAL 419
             P   +   N+ A  ++ G +H+ AL
Sbjct: 539 RQPVQASGLSNIVA--IAAGGSHSLAL 563



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 169/379 (44%), Gaps = 41/379 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+L SR  P   SA     + +LA G AH L L   G V+A G N   Q
Sbjct: 124 WGDNASGQLGDGTLTSRLLPQRVSALSN--VVSLASGFAHVLALRADGTVWAWGDNRNNQ 181

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S  PL++ GL   VV +  G   S A+  DG L+ WG N  GQLG G    
Sbjct: 182 LG-DGTLTRSSVPLQVPGLSG-VVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTTVR 239

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L        ++G   ++A+   G V +WG    G+LG G          
Sbjct: 240 RITPV--QVASLD--SVVSVSVGAYHALALRADGTVWAWGHNAYGQLGDG---------- 285

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP- 281
           + ++ T  +   L  V+  +  AG  HS  +  +G V+ +GD    ++    GN    P 
Sbjct: 286 TNTQRTQPVSVSLTDVRTLV--AGNYHSLAVRTDGAVWAWGDNRYRQL--GTGNLTSSPL 341

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            L + +     +V G  H+  L + G  ++WG N  G LG  + +   +P +V G  +  
Sbjct: 342 PLQAGMTGGVTLVAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSG-LALG 400

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
             D  S G  HT  + + G++  W            G +  GQLG+G   D   P  VN 
Sbjct: 401 RADATS-GQLHTVMLGANGRLWAW------------GDNQQGQLGNGTQQDSSLPLPVNL 447

Query: 401 GENVKALQVSCGFNHTGAL 419
                 + V+ G+ HT AL
Sbjct: 448 ---TDVISVASGYRHTAAL 463



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 171/382 (44%), Gaps = 45/382 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG  + E R  PV  S        A   G  HT+ L   G ++A G N  GQ
Sbjct: 372 WGDNVFGQLGDTTFEPRMAPVQVSGLALGRADA-TSGQLHTVMLGANGRLWAWGDNQQGQ 430

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       SL PL ++    +V+ +++GY H++A+  DG ++ WG N  GQLG G    
Sbjct: 431 LGNGTQQDSSL-PLPVN--LTDVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTD 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L G+     A G   S+A+   G V +WG    G+LG G          
Sbjct: 488 R--PTPVQVVGLGGV--TAIATGDNHSLALRSNGTVWAWGFNRYGQLGDGT--------- 534

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P     L  + V IAA G  HS  +  +G V+ FG         Q GN  R  +
Sbjct: 535 AVDRRQPVQASGLSNI-VAIAAGGS-HSLALRSDGTVWAFGY----NFDGQLGNGTRTWT 588

Query: 283 LIS----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           L+      L     +  G  ++  L + G ++ WG N +G LG+G+      P +V G  
Sbjct: 589 LVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQGSAQPLQVPG-- 646

Query: 339 SESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
             S +  ++ G  H+ A+ S+G +  WG       F+ +G     QLG+G     + P +
Sbjct: 647 -LSGITSIAAGSYHSLALRSDGWVWAWG-------FNFEG-----QLGNGTSTPRLSPGL 693

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V    N  A+ +  G  H+ A+
Sbjct: 694 VAGMSN--AVAIIAGDQHSLAM 713



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 138/294 (46%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G++  R  PV         + A+A G  H+L L   G V+A G N +GQ
Sbjct: 472 WGMNRFGQLGEGTVTDRPTPVQVVGLG--GVTAIATGDNHSLALRSNGTVWAWGFNRYGQ 529

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +    +P++ SGL   +V I+ G  HS A+  DG ++ +G N +GQLG G +  
Sbjct: 530 LGDGTAVDRR-QPVQASGLSN-IVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTW 587

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +   LS + +  A  G   S+A+   G V +WG   SG+LG G          
Sbjct: 588 TLVPV--QAVGLSSVVSLAA--GSLYSLALRADGTVWAWGYNASGQLGVGT--------- 634

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +     P  +  L G+     AAG  HS  +  +G V+ +G     ++          P 
Sbjct: 635 TQGSAQPLQVPGLSGITS--IAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPRLSPG 692

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           L++ +  +  ++ G  H+  + + G ++ WG N  G LG G       P +VQG
Sbjct: 693 LVAGMSNAVAIIAGDQHSLAMKADGTVWAWGLNIKGQLGTGDTTEAWFPVQVQG 746



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 164/379 (43%), Gaps = 41/379 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+L     P+         + A+  GG+ +L L   G ++A G N +GQ
Sbjct: 174 WGDNRNNQLGDGTLTRSSVPLQVPGLS--GVVAVVAGGSSSLALRADGTLWAWGDNRYGQ 231

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   + P++++ L   V   S G +H+ A+  DG ++ WG N+ GQLG G    
Sbjct: 232 LGDGTTV-RRITPVQVASLDSVVSV-SVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQ 289

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+   +  +  +       G   S+AV   G V +WG     +LG G          
Sbjct: 290 RTQPVSVSLTDVRTLVA-----GNYHSLAVRTDGAVWAWGDNRYRQLGTGNL-------- 336

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS   P       GV +    AG+ HS  +  +G  + +GD    ++          P 
Sbjct: 337 -TSSPLPLQAGMTGGVTL---VAGYRHSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPV 392

Query: 283 LISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            +S L     +   G  HT +L + G L+ WG N+ G LG G+      P     P + +
Sbjct: 393 QVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPL----PVNLT 448

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  V+ G++HTAA+ S+G + TW            G +  GQLG G   D   P  V  
Sbjct: 449 DVISVASGYRHTAALRSDGTVWTW------------GMNRFGQLGEGTVTDRPTPVQVVG 496

Query: 401 GENVKALQVSCGFNHTGAL 419
              V A  ++ G NH+ AL
Sbjct: 497 LGGVTA--IATGDNHSLAL 513



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 148/317 (46%), Gaps = 30/317 (9%)

Query: 54  GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
           G+   R   V   A E+     LA G  H+L +   G V+A G N  GQLG   +   + 
Sbjct: 33  GAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKA- 91

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P++++GL  +V  ++ G  +S A+  DG ++ WG N++GQLG G   +++  +P +V  
Sbjct: 92  SPVQVAGLT-QVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRL--LPQRVSA 148

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           LS + +   A GF   +A+   G V +WG   + +LG G           T    P  + 
Sbjct: 149 LSNVVSL--ASGFAHVLALRADGTVWAWGDNRNNQLGDGTL---------TRSSVPLQVP 197

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE 291
            L GV   +  AG   S  +  +G ++ +GD    ++   +G   RR  P  ++ L    
Sbjct: 198 GLSGVVAVV--AGGSSSLALRADGTLWAWGDNRYGQL--GDGTTVRRITPVQVASLDSVV 253

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD--QVSCG 349
            V  G YH   L + G ++ WG N  G LG G+     + +R Q P S S  D   +  G
Sbjct: 254 SVSVGAYHALALRADGTVWAWGHNAYGQLGDGT-----NTQRTQ-PVSVSLTDVRTLVAG 307

Query: 350 WKHTAAI-SEGKILTWG 365
             H+ A+ ++G +  WG
Sbjct: 308 NYHSLAVRTDGAVWAWG 324



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 153/357 (42%), Gaps = 36/357 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y +LG G+L S   P+   A     +  L  G  H++ L   G  ++ G N FGQ
Sbjct: 323 WGDNRYRQLGTGNLTSS--PLPLQAGMTGGVT-LVAGYRHSVALGADGTAWSWGDNVFGQ 379

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P+++SGL       ++G  H+  +  +G L+ WG N  GQLG G +  
Sbjct: 380 LG-DTTFEPRMAPVQVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQD 438

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
             +P+P  +  +  +     A G+  + A+   G V +WG    G+LG G          
Sbjct: 439 SSLPLPVNLTDVISV-----ASGYRHTAALRSDGTVWTWGMNRFGQLGEGTV-------- 485

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T   TP  +  L GV     A G  HS  +  NG V+ +G     ++        R+P 
Sbjct: 486 -TDRPTPVQVVGLGGVTA--IATGDNHSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPV 542

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             S L     +  GG H+  L S G ++ +G N +G LG G+      P +  G    S 
Sbjct: 543 QASGLSNIVAIAAGGSHSLALRSDGTVWAFGYNFDGQLGNGTRTWTLVPVQAVG---LSS 599

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           V  ++ G  ++ A+ ++G +  W            G+++ GQLG G       P  V
Sbjct: 600 VVSLAAGSLYSLALRADGTVWAW------------GYNASGQLGVGTTQGSAQPLQV 644



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 32/290 (11%)

Query: 119 SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
           +G +   V+++ G +HS A+  DG ++ WG N  GQLG G    K  P+  +V  L+ + 
Sbjct: 46  AGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPV--QVAGLTQVT 103

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           +   A G + S+A+   G V +WG   SG+LG G           TS   P+ +  L   
Sbjct: 104 S--VAAGDQYSLALDADGAVWAWGDNASGQLGDGTL---------TSRLLPQRVSALS-- 150

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
            V   A+GF H   +  +G V+ +GD   +++       +  P  +  L     VV GG 
Sbjct: 151 NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVPGLSGVVAVVAGGS 210

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
            +  L + G L+ WG N  G LG G+     +P +V    S   V  VS G  H  A+ +
Sbjct: 211 SSLALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVA---SLDSVVSVSVGAYHALALRA 267

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           +G +  W            GH++ GQLG G +     P  V+   +V+ L
Sbjct: 268 DGTVWAW------------GHNAYGQLGDGTNTQRTQPVSVSL-TDVRTL 304


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGL +  +  +P    A +   +   +CG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K+
Sbjct: 120 QLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKE 179

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  +   P K++   G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 180 A--IYSTPQKIDI--GKPISWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPS 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEG 275
            +      P+ +  L G KVKI + G  H+  + E   VY FG     ++     +F+  
Sbjct: 229 DKLKKHKKPQRVSGLSG-KVKIVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFE-- 284

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              + P  +  L       V CG  HT V+T  G LYT+G   +G LG+G
Sbjct: 285 --TQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLG 332



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 152/325 (46%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          IS G  H+  +T +G+LY++G N+ GQLGL  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDRPAHISCGDEHTVLVTGNGKLYVFGSNNWGQLGL-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       A+ G   ++  T  GK+ S G    G+LG G  S    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   T   IK+L        +AG   SA +  +G+++++GD +  ++  ++     
Sbjct: 132 FQEISFFNTQYKIKQL--------SAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYS 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGP 337
            P  I        + CG YH+  +T  GELYT+G  ENG LG+ S  +     P+RV G 
Sbjct: 184 TPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGL 243

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 396
             +  V  VSCG +HT A++E ++ T+G G              GQLGHG  +     P 
Sbjct: 244 SGK--VKIVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFIFETQLPK 289

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V+       L V+CG NHT  + +
Sbjct: 290 AVDVLTKKTILYVTCGENHTAVITD 314



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 146/304 (48%), Gaps = 26/304 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  S G +H
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAIS-KPTCVKALKSEKVVFASCGRNH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT----KQAALGFEQSV 190
           +   T  G+LY  G NS GQLGLG  + +     T  + +S   T    KQ + G   S 
Sbjct: 101 TLLYTEQGKLYSSGGNSEGQLGLGDTSGR-----TSFQEISFFNTQYKIKQLSAGSNTSA 155

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G+LG  +E+            TP+ I    G  +   + G+ HS
Sbjct: 156 ALTVDGKLFMWGDNSEGQLGLEKEAIY---------STPQKID--IGKPISWISCGYYHS 204

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEG--NHARRPSLISKLPYSEEVV-CGGYHTCVLTSGG 307
           A + ++G +Y FG+    K+          ++P  +S L    ++V CGG HT  +T   
Sbjct: 205 AFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE-K 263

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG 367
           E+YT+G  + G LG G+        +     ++  +  V+CG  HTA I++  +L     
Sbjct: 264 EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGD 323

Query: 368 GSHG 371
           G HG
Sbjct: 324 GRHG 327



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 9/69 (13%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L       V+AT     
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHML-------VFATPRPKE 373

Query: 101 GQLGISENI 109
            ++ I++ +
Sbjct: 374 SEMMINDEL 382


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 173/379 (45%), Gaps = 36/379 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+           PV     E  ++ A+A G   +L +   G V+A G+N+ G
Sbjct: 115 IWGHTNYGQRKSDVYRDFTTPVKVK--ELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHG 172

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LGI   +  S  P+++ GLK +VV +S G +HS A+  DG ++ WG N +G+LG     
Sbjct: 173 ELGIGS-LKPSAVPVKVKGLK-DVVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTE 230

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
              + +P +V+ LS +    A  GF  S+A+   G V  WG G   + G    S      
Sbjct: 231 DYTVSVPVRVKGLSDVIAISAG-GF-HSIALNKDGAVWIWGGGIIEKNGKIDNS------ 282

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                Y P  I+ L   KV   AAG+ HS  + ++G V+++G  +   +    G H+   
Sbjct: 283 -----YIPVRIRWLN--KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLL 335

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-LHSPERVQGPFSE 340
             +  L     V  G  H+  LT  G ++ WG+N  G LG  +    L+ P +V+     
Sbjct: 336 VQVKGLKNVVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL--- 392

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
             V  ++ G  HT AI     + W WG ++           GQLG+G       PT V  
Sbjct: 393 DNVVAIATGGSHTLAIKRDGTV-WSWGANN----------KGQLGNGTYKSSYIPTCVKG 441

Query: 401 GENVKALQVSCGFNHTGAL 419
             N  A+ V  G  H+ A+
Sbjct: 442 LNN--AVLVEAGSQHSLAV 458



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 188/422 (44%), Gaps = 71/422 (16%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+  YG LG    E  +  V     +  ++ A+A G  H++ LT+ G ++A G N FG
Sbjct: 315 VWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVAVAAGRLHSVALTKNGTIWAWGNNAFG 372

Query: 102 QLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG  EN  +SL  P ++  L   VV I+TG  H+ AI  DG ++ WG N+ GQLG G  
Sbjct: 373 QLG-RENNSFSLNLPYKVKWLD-NVVAIATGGSHTLAIKRDGTVWSWGANNKGQLGNG-- 428

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG------------------ 202
             K   IPT V+ L+     +A  G + S+AV   G V  WG                  
Sbjct: 429 TYKSSYIPTCVKGLNNAVLVEA--GSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPL 486

Query: 203 -------------AGGSGRL----------GHGQESSILGFLRSTSEYTPRLIKELEGVK 239
                        AGG   +          G G +     F  S+     +LI+ L+ +K
Sbjct: 487 PIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIR-LDNIK 545

Query: 240 -VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
            V+  AAG+ HS  +  +G V+ +GD  +D    +  N + +P  I  L    +V  G Y
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKK-KYLNFSEKPVKIKGLSGVVKVAAGKY 604

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
           H+  L   G +++WG N  G LG G+ +    P RV+G    + V  ++ G  H+ A+  
Sbjct: 605 HSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL---NNVVAIAAGDYHSMALKK 661

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           +G +  W            G +  GQLG  N      P  V   +NV A  ++ G  H+ 
Sbjct: 662 DGTVWVW------------GSNIRGQLGRRNIEFSTVPLKVEKLDNVVA--IAAGDTHSV 707

Query: 418 AL 419
           AL
Sbjct: 708 AL 709



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 187/383 (48%), Gaps = 46/383 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+ +    PV     +   + A++ G  H+L L + G V+  G  ++GQ
Sbjct: 66  WGYNGFGQLGNGTYKDSCIPVRVKGLK--DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQ 123

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
                   ++  P+++  L K +V I+ G+  S A+  DG ++ WG N++G+LG+G  + 
Sbjct: 124 RKSDVYRDFT-TPVKVKEL-KNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIG--SL 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           K   +P KV+ L  +    A  G   S+A+   G V SWG    G LG+          R
Sbjct: 180 KPSAVPVKVKGLKDVVAVSA--GLYHSLALKRDGTVWSWGYNEDGELGN----------R 227

Query: 223 STSEYT---PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
            T +YT   P  +K L  V + I+A GF HS  ++++G V+I+G   ++K    + +++ 
Sbjct: 228 PTEDYTVSVPVRVKGLSDV-IAISAGGF-HSIALNKDGAVWIWGGGIIEKN--GKIDNSY 283

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLHSPERVQGP 337
            P  I  L     +  G  H+  L   G ++ WG N  G LG  +G     HS   VQ  
Sbjct: 284 IPVRIRWLNKVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGE----HSFLLVQVK 339

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 396
             ++ V  V+ G  H+ A+++   + W W          G+++ GQLG  N+   ++ P 
Sbjct: 340 GLKNVV-AVAAGRLHSVALTKNGTI-WAW----------GNNAFGQLGRENNSFSLNLPY 387

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
            V + +NV A  ++ G +HT A+
Sbjct: 388 KVKWLDNVVA--IATGGSHTLAI 408



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 25/206 (12%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           +++++A G  H+L +   G V++ G  D       + + +S +P++I GL   VV+++ G
Sbjct: 546 NVRSIAAGYFHSLAVRTDGTVWSWG--DTNLDNKKKYLNFSEKPVKIKGLSG-VVKVAAG 602

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            +HS A+  DG ++ WG N+ GQLG G +    +P+  +V+ L+ +     A G   S+A
Sbjct: 603 KYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPV--RVKGLNNVVA--IAAGDYHSMA 658

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT--PRLIKELEGVKVKIAAAGFLH 249
           +   G V  WG+   G+LG           R   E++  P  +++L+ V V I AAG  H
Sbjct: 659 LKKDGTVWVWGSNIRGQLG-----------RRNIEFSTVPLKVEKLDNV-VAI-AAGDTH 705

Query: 250 SACIDENGRVYIFG---DRAVDKMLF 272
           S  + ++G V+++G   DR + K + 
Sbjct: 706 SVALKKDGTVWVWGIECDRDLSKEIL 731



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 35/300 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           +V+    G  H+ AI  DG ++ WG N  GQLG G      IP+  +V+ L  +    A 
Sbjct: 43  KVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPV--RVKGLKDVVAVSA- 99

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   S+A+   G V  W     G   +GQ  S     R  +  TP  +KEL+ + V I 
Sbjct: 100 -GTFHSLALKKDGSVWIW-----GHTNYGQRKS--DVYRDFT--TPVKVKELKNI-VAI- 147

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           AAG+  S  +  +G V+ +G     ++       +  P  +  L     V  G YH+  L
Sbjct: 148 AAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGLKDVVAVSAGLYHSLAL 207

Query: 304 TSGGELYTWGSNENGCLGIGSID--VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
              G +++WG NE+G LG    +   +  P RV+G    S V  +S G  H+ A+++   
Sbjct: 208 KRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGL---SDVIAISAGGFHSIALNKDGA 264

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           + W WGG  G   ++G           D  YI P  + +    K + ++ G+ H+ AL +
Sbjct: 265 V-WIWGG--GIIEKNGKI---------DNSYI-PVRIRWLN--KVVAIAAGYRHSIALKD 309



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 4/128 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+ E+ + PV       +++ A+A G  H++ L + G V+  G N  GQ
Sbjct: 618 WGYNAYGQLGNGTRETSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQ 675

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   NI +S  PL++  L   VV I+ G  HS A+  DG +++WG   +  L     ++
Sbjct: 676 LG-RRNIEFSTVPLKVEKLD-NVVAIAAGDTHSVALKKDGTVWVWGIECDRDLSKEILSS 733

Query: 163 KVIPIPTK 170
             IP+  K
Sbjct: 734 SSIPVQIK 741


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 167/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ ++CG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG       +  P  I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLGHDLP---TKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +  
Sbjct: 127 E-KEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L         CG   +  LT+ G ++T G+   G LG G       P R+   
Sbjct: 240 YPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A   S GK+  +G G            S GQLG  +    + P
Sbjct: 299 LMGSTITQVACGNRHTLAFVPSRGKVYAFGLG------------SSGQLGTRSTKSLMLP 346

Query: 396 TIV 398
            +V
Sbjct: 347 QVV 349



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ DY +LG   L ++ RP +    + + +  ++CG  H+L L++ G V + G ND GQL
Sbjct: 65  GSNDYSQLG-HDLPTK-RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122

Query: 104 G-ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G  +E     L  +    + K VVQI+ G +HS A+T  GELY WG N  GQLG+     
Sbjct: 123 GHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPND 182

Query: 163 KV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E       
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+ AA G   S  +   G V+  G  A  ++     ++   P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT     S G++Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 130/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P ++        +Q + G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P+LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDYSQLGHDLPTK-----------RPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A +K + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATEKEIVQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSIDVL---HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S + L   + P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +     +CG
Sbjct: 223 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACG 258



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 17/131 (12%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
           ++V CG  HT  LT+ G++Y  GSN+   LG    D+     ++     +  + Q+SCG 
Sbjct: 43  QQVSCGHRHTLFLTATGKVYACGSNDYSQLGH---DLPTKRPQLIPELQDYVIIQISCGS 99

Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQ 408
           +H+ A+S+ G++L+WG             +  GQLGH  + + +  P +V    +   +Q
Sbjct: 100 RHSLALSDWGQVLSWG------------DNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQ 147

Query: 409 VSCGFNHTGAL 419
           ++CG NH+ AL
Sbjct: 148 IACGNNHSLAL 158



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 14/121 (11%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKI 361
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V QVSCG +HT  ++    
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLT---- 56

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  + G     G +   QLGH  D+    P ++   ++   +Q+SCG  H+ AL +
Sbjct: 57  -------ATGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSD 107

Query: 422 Y 422
           +
Sbjct: 108 W 108


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 54/389 (13%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SL S+   ++  A E      +  +ACGG H + +T  G +++ G    G+LG  +  ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330

Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
            +      +SG   E+V  + G +H+ A+T+ G+LY WG  ++  G LG G + +  IP 
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
               + + GI     + G   +  VT  G++ ++G G  G LGHG           TS +
Sbjct: 389 KVSGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHI--------TSNF 439

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
            PR ++ L G++    A G  H+A   E               + ++Y +GD   DK   
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496

Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
             G++  R  P  ++ L      +V CG   T  LT+ G +YT GS   G LG  + +  
Sbjct: 497 GHGDNEPRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANG- 555

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             P  V+G  + S V++V+CG  H A + S+ ++ TWG G              GQLGHG
Sbjct: 556 KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKG------------LNGQLGHG 603

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           ++     PTIV+  ++ +   V+CG   T
Sbjct: 604 DNNHRNTPTIVDVLKDKQVKNVACGSKFT 632



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 145/336 (43%), Gaps = 36/336 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +       +++ +ACG  HT  +T +G +Y    G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P ++SG  +   V  IS G  H++ +T  G+L+ +G  S G LG G
Sbjct: 374 GLLGHGSEVSHWI-PQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHG 432

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
                    P +VE L G+ T + A G   + A                    K+ +WG 
Sbjct: 433 DHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGD 490

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G  GRLGHG     L          P  +  L   ++   A G   +  +   GRVY  G
Sbjct: 491 GDKGRLGHGDNEPRL---------VPECVAALMEERICQVACGNDLTVALTTAGRVYTMG 541

Query: 264 DRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             A  ++     N  + P+ +       + EEV CG YH  VLTS  E+YTWG   NG L
Sbjct: 542 STAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQL 600

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G G  +  ++P  V     +  V  V+CG K T  I
Sbjct: 601 GHGDNNHRNTPTIVD-VLKDKQVKNVACGSKFTVVI 635



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 119/277 (42%), Gaps = 49/277 (17%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +     A G   +V VT  G++ SWG    GRLGHG E+ +         
Sbjct: 280 LPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV--------- 330

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P++I  L G  V++ A G  H+  +  +G +Y +GD   +  L   G+      P  +
Sbjct: 331 SHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV 390

Query: 285 S------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           S      ++ Y   + CG +HT V+TS G+L+T+G    G LG G     + P  V+   
Sbjct: 391 SGQMEGIRVSY---ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE-TL 446

Query: 339 SESPVDQVSCGWKHTAAISEG----------------KILTWGWGGSHGTFSEDGHSSGG 382
                 +V+CG  HTAA  E                 K+ TWG G              G
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDK------------G 494

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +LGHG++   + P  V      +  QV+CG + T AL
Sbjct: 495 RLGHGDNEPRLVPECVAALMEERICQVACGNDLTVAL 531



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+  +   G ++ +G+ +  ++          P +I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  ++  G LG GS +V H  P++V G      V
Sbjct: 341 GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS-EVSHWIPQKVSGQMEGIRV 399

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+ +    P  V    
Sbjct: 400 SYISCGAWHTAVVTSAGQLFTFGDG------------SFGALGHGDHITSNFPREVETLR 447

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++  +V+CG  HT A +E +
Sbjct: 448 GLRTTKVACGVWHTAAAVEAI 468


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 152/348 (43%), Gaps = 37/348 (10%)

Query: 43  WGNGDYGRLGLGSLESRWR--PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGNGD GRLG G     ++   V+   +  H        G H + LT  G VY+ G  D 
Sbjct: 215 WGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHP------EGKHYMALTSEGEVYSWGNGDG 268

Query: 101 GQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G+LG  +      EP  + GL      + VV I  G  +S+AIT DGEL+ WG+ + G+L
Sbjct: 269 GRLGHGDTNSRE-EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRL 327

Query: 156 GLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           G G    ++   PT V  L G  +       G  Q++AVT  G V SWG G  G+LG G 
Sbjct: 328 GHGSSEDQL--TPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGG 385

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                    S    TP++I  L+G  +     G   S  + + G ++ +G     ++   
Sbjct: 386 ---------SDGCKTPKIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHG 436

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
              H R P  +  L   +  +V  G  H  V+T  GE+Y WG N+ G LG  S      P
Sbjct: 437 TEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDP 496

Query: 332 ERVQGPFSESPVDQVSCG------WKHTAAISEGKILTWGWGGSHGTF 373
             +  P     +  ++CG      W  T   S G  + +     HGTF
Sbjct: 497 TLM--PLDGKSISGIACGPAQSFCWTSTGHWSVGLRVPFVVDVCHGTF 542



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 172/374 (45%), Gaps = 51/374 (13%)

Query: 55  SLESRWRPVVCSAFEKHSLKALA-CGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYS 112
           S ES+   ++ S  +K  LK  A   G H + LT  G VY+ G  D G+LG  + N+ Y 
Sbjct: 174 SSESQGPQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYK 233

Query: 113 LEPLRISGLKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
                     ++V+ I   YH    H  A+T +GE+Y WG    G+LG G   ++    P
Sbjct: 234 ---------GQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSR--EEP 282

Query: 169 TKVECLSGI----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           T V  LSG            G   S A+T  G++ +WG G  GRLGHG          S 
Sbjct: 283 TLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGS---------SE 333

Query: 225 SEYTPRLIKELEGVKVK--IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + TP L+  L+G +V      +G   +  + ++G V+ +GD    K+     +  + P 
Sbjct: 334 DQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPK 393

Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           +I +L   +   V CG   +  LT  G ++TWG  ++  LG G+ + +  P++++G   +
Sbjct: 394 IIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGK 453

Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             VD V+ G  H   ++ EG++  W            G +  GQLG  +      PT++ 
Sbjct: 454 KVVD-VAVGSMHCLVMTEEGEVYGW------------GRNDQGQLGDSSFSTKSDPTLMP 500

Query: 400 F-GENVKALQVSCG 412
             G+++    ++CG
Sbjct: 501 LDGKSISG--IACG 512



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 41/242 (16%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-- 247
           +A+T  G+V SWG G  GRLGHG  +                    +G KV +    +  
Sbjct: 204 MALTSEGEVYSWGNGDGGRLGHGDTNVCY-----------------KGQKVLVIVYPYHP 246

Query: 248 --LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------EVVCGGYH 299
              H   +   G VY +G+    ++   + N    P+L+  L   +       +VCG  +
Sbjct: 247 EGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTY 306

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAIS 357
           +  +T+ GEL+TWG    G LG GS +   +P  V        +D + CG     T A++
Sbjct: 307 SAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVID-ICCGSGDAQTLAVT 365

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           +   + W WG        DG    G+LG G       P I++  +    ++V CG   + 
Sbjct: 366 DDGTV-WSWG--------DGDY--GKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSL 414

Query: 418 AL 419
           AL
Sbjct: 415 AL 416


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 170/404 (42%), Gaps = 47/404 (11%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            Q R    +G    G LGLG    R  P +        +  +  G   T  LT TG VY+
Sbjct: 8   FQERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYS 67

Query: 95  TGLNDFGQLGISE------NIGYSL------EPLRISGLKKEVVQISTGYHHSSAITVDG 142
            G N  GQ GI E       +  SL      EP      +  +V    G  H   +T +G
Sbjct: 68  CGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEG 127

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           EL   G+N++GQLG G +  K   +P  V   +G    + A  +  +V VT   +  ++G
Sbjct: 128 ELQTCGRNNSGQLGHG-EVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G G+LGHG  SS     RS     P  +   +G+ V   A G  H+     +G +Y F
Sbjct: 187 GNGYGQLGHGDHSS-----RS----APAALACFQGLGVLSVACGVYHTVVSVASGGLYSF 237

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           G +     L  EG  +R   +  +   S  E++ CG YHT  L+  GE+  +G N+ G L
Sbjct: 238 G-KNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRNDYGQL 296

Query: 321 GIGSIDVLHSPERVQG----PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSE 375
           G+G     H     QG      +   + QV+CG  HT ++  EG++  +           
Sbjct: 297 GLG-----HRESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRVYPF----------- 340

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G ++ GQLG G   D   P  V         QV+ GF HT  L
Sbjct: 341 -GRNNHGQLGTGTREDACRPCFVEGLSQSFVCQVAAGFYHTLCL 383



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 13/157 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +G  D+G+LGL   ESR+ PV    C++     ++ LACG  HT+ L+  G V A G ND
Sbjct: 237 FGKNDHGQLGLEGGESRFTPVQHRACTSV----VEQLACGYYHTVALSRAGEVVAFGRND 292

Query: 100 FGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +GQLG+   E+     +   ++GL+  ++Q++ G +H+ ++  +G +Y +G+N++GQLG 
Sbjct: 293 YGQLGLGHRESTWQGGQVPDLAGLR--IIQVACGSYHTISLDDEGRVYPFGRNNHGQLGT 350

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G +     P    VE LS  F  Q A GF  ++ +TG
Sbjct: 351 GTREDACRPC--FVEGLSQSFVCQVAAGFYHTLCLTG 385


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2958 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3017

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3018 NGRLGLGLSSG-TIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3076

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3077 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGS 3187

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3188 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3234

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3235 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3271



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 178/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG   +E     V  S     +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3956 WGHNHRGQLG--GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4013

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4014 GRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4071

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G+     A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 4072 HGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGD--- 4126

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L+  L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4127 ------SEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4181 SDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4240

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4241 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4287

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4288 IQRPRLVAALQGKKINRVACGSAHTLA 4314



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3014 GEATNGRLGLG-LSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGD 3072

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3073 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3131

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3132 DNTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGG--- 3186

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3187 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3240

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3241 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3300

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILT 363
            QG      + +V+CG  H+ A +   + T
Sbjct: 3301 QG-LEGQKITRVACGSSHSVAWTTVDVTT 3328



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 18/291 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG   N      P  I  L+  EVV I+ G  
Sbjct: 4042 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4100

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
            HS+ IT  GEL+ WGK   G+LG G    ++ P    V+ L G  +       G  Q++ 
Sbjct: 4101 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4158

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I  L G+ V     G   S 
Sbjct: 4159 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVVKVECGSQFSV 4209

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP  +  L   +   +  G  H    T  GE+
Sbjct: 4210 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4269

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            YTWG N+ G LG G+ + +  P R+        +++V+CG  HT A S  K
Sbjct: 4270 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4319



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 141/319 (44%), Gaps = 34/319 (10%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++        +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I 
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT-YLEEPKMIG 533

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV ++ G  +S+AIT DGELY WG+ + G+LG G    +  P+   V   
Sbjct: 534 TFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPM--VVTAF 591

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 592 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 642

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 643 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKV 702

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V  G  H   LT  GE+ +WGSN+     +   D L S ++        P        
Sbjct: 703 VDVAVGSTHCLALTDDGEVLSWGSNDK----LQHFDTLFSNKK-------QPKALPGLNS 751

Query: 351 KHTAAISEGKILTWGWGGS 369
           KH   IS G   ++ W  S
Sbjct: 752 KHIVGISCGPGQSFAWSSS 770



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3068 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3127

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3128 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG-- 3185

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3186 GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3242

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3243 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3292

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3293 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3323



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  + C     L L+ +G VY+                 +L P+ I  L
Sbjct: 433 PIQCKALSSLGVTQIVCSEKGFLILSSSGAVYSQNYK-----------STTLAPMLIHVL 481

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G      +  P  +   +G  
Sbjct: 482 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTT--YLEEPKMIGTFNG-- 537

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S A+T  G++ +WG G  GRLGHG          S  + TP +
Sbjct: 538 -KQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTTPMV 587

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +   +G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 588 VTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 647

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD V+
Sbjct: 648 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD-VA 706

Query: 348 CGWKHTAAIS-EGKILTWG 365
            G  H  A++ +G++L+WG
Sbjct: 707 VGSTHCLALTDDGEVLSWG 725



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 4/164 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P+V +AF+   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 566 WGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 625

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 626 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 685

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             + +  P  ++ L G      A+G    +A+T  G+VLSWG+ 
Sbjct: 686 --EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSN 727



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/237 (32%), Positives = 116/237 (48%), Gaps = 14/237 (5%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GK+ + G   +GRLG G  S  +   R  +  +  +IK     KV + + G  H+  +  
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIK-----KVAVHSGGR-HAMALTV 3061

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 3062 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3121

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWG 367
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG G
Sbjct: 3122 LGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGFVFSWGDG 3177



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P +   F      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 510 WGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVH-VACGSTYSAAITADGELYTWGR 568

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +      GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 569 GNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 628

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 629 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 686

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L+  L+G KV   A G  H   + ++G V  +G
Sbjct: 687 HV---------RYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWG 725



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3951 GTIYGWGHNHRGQLG-GIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4009

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 4010 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4069

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4070 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4120

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4121 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4180

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4181 SDGCKIPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4227

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4228 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4259



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P++I    G +    V   A 
Sbjct: 499 LALSSNGEVFSWGCGDGGRLGHGD---------TTYLEEPKMIGTFNGKQAGKHVVHVAC 549

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P +++        +V CG     T 
Sbjct: 550 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTL 609

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ V+    +  + +V CG + + A++ +G+
Sbjct: 610 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQ 668

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G +             +LGHG D    +P +++  +  K + V+ G  H  AL 
Sbjct: 669 VYTWGKGDNQ------------RLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALT 716

Query: 421 E 421
           +
Sbjct: 717 D 717



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 679

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  +  L+ K+VV ++ G  H  A+T DGE+  WG N   Q    L
Sbjct: 680 LGHGTDEHVRY---PKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTL 736

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 737 FSNKKQPKALP 747



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHT 353
           G H   L+S GE+++WG  + G LG G    L  P+ +    G  +   V  V+CG  ++
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYS 554

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ +G++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 555 AAITADGELYTWGRGNY------------GRLGHGSSEDQTTPMVVTAFKGLKVVDVACG 602


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 180/408 (44%), Gaps = 44/408 (10%)

Query: 25  GICKRWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH 82
           G C R  SS  +R    +W  G   YG LG     +R    +   FE   +  +A G  H
Sbjct: 219 GSCLRACSSFHERE---VWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEH 275

Query: 83  TLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAIT 139
           T+ L  TG VY  G ND GQ   G ++ +G  L  + I G +K V V    G  H+  + 
Sbjct: 276 TVLLCSTGEVYTAGYNDNGQCGQGTTQRVGV-LTRVPIDGGRKAVQVHAYNGCEHTLVVL 334

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            DG++  +G N  GQLG G  +++  P+P  V  L+GI   QA+  +  SV     G+V 
Sbjct: 335 DDGQMMSFGYNYRGQLGQGNTSSE--PVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVY 392

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           ++G    G+LG G                P L++ L G ++   A G  H+        V
Sbjct: 393 TFGRNDFGQLGSGD---------VIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGV 443

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS-KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNE 316
              G     ++  +     R+   +  KL  ++   V CG YHT VLT+   ++ +G N+
Sbjct: 444 QSCGKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRND 503

Query: 317 NGCLGIGSIDVLHSPERVQGPF-----SESPVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
            G LG+G     H+ +RV GP       E  V ++S G  HT  I    +L + +G +H 
Sbjct: 504 YGQLGLG-----HTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGML-FVFGRNH- 556

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                     GQLG G+  +   P  V+     +  +V+ GF HT  L
Sbjct: 557 ---------HGQLGTGDTNERHSPFPVSTFLGKRIAKVAAGFYHTIVL 595



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 82/156 (52%), Gaps = 4/156 (2%)

Query: 44  GNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  DYG+LGL S ES+ + V V    +   ++ + CG  HT+ LT    V+  G ND+GQ
Sbjct: 447 GKNDYGQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQ 506

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+         P  I G + K V +IS G +H+  I  DG L+++G+N +GQLG G   
Sbjct: 507 LGLGHTTQRVFGPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTN 566

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
            +  P P  V    G    + A GF  ++ +TGG K
Sbjct: 567 ERHSPFP--VSTFLGKRIAKVAAGFYHTIVLTGGDK 600



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 13/263 (4%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LG G+  S   P          +   +C   H++   + G VY  G NDFGQLG  + 
Sbjct: 348 GQLGQGNTSSEPVPKPVRGLNGIRVTQASCSYYHSVIACDNGEVYTFGRNDFGQLGSGDV 407

Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
           I   L P  +  L+ + +  ++ G +H+   T++  +   GKN  GQLGL    ++   +
Sbjct: 408 IDRKL-PCLVESLRGQRITTLACGQYHTVVSTLEIGVQSCGKNDYGQLGLESTESQRKFV 466

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
             K + L G   +    G+  ++ +T    V  +G    G+LG G  +  +        +
Sbjct: 467 AVKGK-LDGAQVRHVRCGYYHTIVLTAEEHVFGFGRNDYGQLGLGHTTQRV--------F 517

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            P +I+  +   V   +AG  H+  ID +G +++FG     ++   + N    P  +S  
Sbjct: 518 GPTIIEGAQEKHVYRISAGCYHTVLIDADGMLFVFGRNHHGQLGTGDTNERHSPFPVSTF 577

Query: 288 --PYSEEVVCGGYHTCVLTSGGE 308
                 +V  G YHT VLT G +
Sbjct: 578 LGKRIAKVAAGFYHTIVLTGGDK 600


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 163/320 (50%), Gaps = 22/320 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG---GAHTLFLTETGCVYATGLNDF 100
            G G YGRLG G+ +      V S+ +   +  LA       H+L L E+G V++ G  DF
Sbjct: 3382 GEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDF 3441

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG   N      P +I  L+ E VVQ++ G+ HS+ +T DG+L+ +G    G+LGLG 
Sbjct: 3442 GKLG-HGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGLGS 3500

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSIL 218
             A K   +P +V  L G    Q A G   +  V T G  V ++G G  G+LG       L
Sbjct: 3501 VANK--KLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKLG-------L 3551

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
            G+  +T +  P+ ++ +  + +K    G   +  + ++G+V++ G DR     LF+E   
Sbjct: 3552 GY--ATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRE-RA 3608

Query: 278  ARRPSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              +P +++ L  YS E++  G  H   LT+ G++  WG    G LG+  + ++  PE + 
Sbjct: 3609 VFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEII- 3667

Query: 336  GPFSESPVDQVSCGWKHTAA 355
               S+  + Q+S G  H+AA
Sbjct: 3668 TELSDKGIRQISTGRTHSAA 3687



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 157/328 (47%), Gaps = 41/328 (12%)

Query: 44  GNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G G YGRLGLG   ++  P  ++     K  L +      HTL L ETG VY+ G  D+G
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVK-KLSSSKGSDGHTLALAETGVVYSWGDGDYG 462

Query: 102 QLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +LG   N     +P RI+G  L K +  I  GY HS+A+T DG+LY WG+  +G+LG G 
Sbjct: 463 KLG-HGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGD 521

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
             A+   +PT+V  L+ + +   A G   ++ V+  GK V S+G+G  G+LG G+   + 
Sbjct: 522 SNARY--VPTQVAGLAEVGS--VACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGELGKV- 576

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------DRAVD 268
                   Y P++++ L+G+ ++   AG   S  +   G VY +G          D  V+
Sbjct: 577 --------YRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGKGSADAIVN 628

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDV 327
             ++ E     R   IS          G  H   LT   E++ WG+N  G  G G +   
Sbjct: 629 LPMYVEDLAQYRIVDIS---------AGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSP 679

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           +  P +V G      + Q+S G  H+ A
Sbjct: 680 ITRPLKVIG-LEGVSIRQISAGTSHSMA 706



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 169/364 (46%), Gaps = 43/364 (11%)

Query: 64  VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGL 121
           VCSA E  S   +         + E   VY  G N   QL  G  E I   L P++ S +
Sbjct: 330 VCSAVETTSESEVG--------VYEKSDVYVWGSNSSHQLAEGNQEKI---LMPVK-SKM 377

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTK 180
             +V Q+  G + + AI  DG +   GK S G+LGLG+ + + +P    ++C +  + + 
Sbjct: 378 FTQVQQVEAGQYCTFAIHWDGSVSACGKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSS 437

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           + + G   ++A+   G V SWG G  G+LGHG          +T +   R+     G  +
Sbjct: 438 KGSDG--HTLALAETGVVYSWGDGDYGKLGHGN--------CATHKQPERITGPFLGKTI 487

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           K   AG+ HSA + ++G++Y +G+    ++   + N    P+ ++ L     V CG  HT
Sbjct: 488 KYIHAGYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAEVGSVACGSSHT 547

Query: 301 CVLTSGGE-LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG-WKHTAAISE 358
            V++  G+ ++++GS E+G LG G +  ++ P+ V+       + +V  G W   A  + 
Sbjct: 548 LVVSKDGKTVWSFGSGEHGKLGTGELGKVYRPQVVEA-LQGLTIQKVCAGTWFSMALTTA 606

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           G++ TWG              SG  LG G+ D     P  V      + + +S G NH  
Sbjct: 607 GEVYTWG--------------SGAILGKGSADAIVNLPMYVEDLAQYRIVDISAGDNHCL 652

Query: 418 ALLE 421
           AL +
Sbjct: 653 ALTD 656



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 128/278 (46%), Gaps = 32/278 (11%)

Query: 145  YMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            YMWG + +GQL  LG  A+    +P +VE  S    ++   G   +  +   G VL+ G 
Sbjct: 3330 YMWGSDRHGQLAELGYSAS----VPVQVESFS--IARKIICGQNCTFVIQSDGTVLACGE 3383

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL---HSACIDENGRVY 260
            G  GRLG G    +         ++  +I  L+G  +   A       HS  + E+G V+
Sbjct: 3384 GSYGRLGQGNSDDL---------HSLSVISSLQGFVITDLATSVGSDGHSLALAESGEVF 3434

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
             +GD    K+     +  RRP  I  L   +  +V CG  H+ V+TS G+L+T+G+ + G
Sbjct: 3435 SWGDGDFGKLGHGNPDRQRRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFG 3494

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
             LG+GS+     PERV        + QV+CG  HTA +S   +  W +G   G +     
Sbjct: 3495 KLGLGSVANKKLPERVMA-LEGYRIGQVACGLNHTACVSTDGMTVWTFG--EGDY----- 3546

Query: 379  SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
               G+LG G     + P  V    N+   +V CG + T
Sbjct: 3547 ---GKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLT 3581



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 168/391 (42%), Gaps = 44/391 (11%)

Query: 40   AALWGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            A +WG+  +G+L  LG   S   PV   +F     + + CG   T  +   G V A G  
Sbjct: 3329 AYMWGSDRHGQLAELGY--SASVPVQVESFSIA--RKIICGQNCTFVIQSDGTVLACGEG 3384

Query: 99   DFGQLGI-------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
             +G+LG        S ++  SL+   I+ L   V   S G  HS A+   GE++ WG   
Sbjct: 3385 SYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVG--SDG--HSLALAESGEVFSWGDGD 3440

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             G+LG G    +    P ++E L      Q A GF+ S  VT  GK+ ++G G  G+LG 
Sbjct: 3441 FGKLGHGNPDRQ--RRPRQIEALQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGKLGL 3498

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKM 270
            G  +         ++  P  +  LEG ++   A G  H+AC+  +G  V+ FG+    K+
Sbjct: 3499 GSVA---------NKKLPERVMALEGYRIGQVACGLNHTACVSTDGMTVWTFGEGDYGKL 3549

Query: 271  LFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                      P  +  +     ++V CG + T  LT  G+++  G +      +     +
Sbjct: 3550 GLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFLTKDGKVFVCGIDRMPWHSLFRERAV 3609

Query: 329  HSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              P+ +    S+  ++ ++ G +H   ++  GK+L WG  G             GQLG  
Sbjct: 3610 FKPQ-IMTSLSDYSIEDLAVGTEHVLFLTTCGKVLGWGMTGE------------GQLGLP 3656

Query: 388  NDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            +     HP I+    +    Q+S G  H+ A
Sbjct: 3657 HVSLVRHPEIITELSDKGIRQISTGRTHSAA 3687



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 103/210 (49%), Gaps = 16/210 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   +R+ P   +   +  + ++ACG +HTL +++ G  V++ G  + G
Sbjct: 509 WGEGDHGRLGHGDSNARYVPTQVAGLAE--VGSVACGSSHTLVVSKDGKTVWSFGSGEHG 566

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  E +G    P  +  L+   +Q +  G   S A+T  GE+Y WG  S   LG G  
Sbjct: 567 KLGTGE-LGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWG--SGAILGKG-S 622

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  ++ +P  VE L+       + G    +A+T   +V +WG    G+ G G   S +  
Sbjct: 623 ADAIVNLPMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSPIT- 681

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
                   P  +  LEGV ++  +AG  HS
Sbjct: 682 -------RPLKVIGLEGVSIRQISAGTSHS 704



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 18/228 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  +  +P  +   F   ++K +  G  H+  +T+ G +Y  G  D G
Sbjct: 456 WGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGDHG 515

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGK 159
           +LG  + N  Y   P +++GL  EV  ++ G  H+  ++ DG+ ++ +G   +G+LG G+
Sbjct: 516 RLGHGDSNARYV--PTQVAGL-AEVGSVACGSSHTLVVSKDGKTVWSFGSGEHGKLGTGE 572

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                +  P  VE L G+  ++   G   S+A+T  G+V +WG+G    LG G   +I+ 
Sbjct: 573 LGK--VYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAI--LGKGSADAIVN 628

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                    P  +++L   ++   +AG  H   + +   V+ +G  ++
Sbjct: 629 L--------PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSM 668



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 4/153 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+G++G+LG G L   +RP V  A +  +++ +  G   ++ LT  G VY  G      
Sbjct: 560 FGSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILG 619

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            G ++ I     P+ +  L +  +V IS G +H  A+T + E++ WG NS GQ G G   
Sbjct: 620 KGSADAIVNL--PMYVEDLAQYRIVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTC 677

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           +  I  P KV  L G+  +Q + G   S+A T 
Sbjct: 678 SP-ITRPLKVIGLEGVSIRQISAGTSHSMAWTS 709



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 17/153 (11%)

Query: 271  LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            L + G  A  P  +     + +++CG   T V+ S G +   G    G LG G+ D LHS
Sbjct: 3340 LAELGYSASVPVQVESFSIARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHS 3399

Query: 331  PERV---QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGH 386
               +   QG F  + +        H+ A++E G++ +WG     G F        G+LGH
Sbjct: 3400 LSVISSLQG-FVITDLATSVGSDGHSLALAESGEVFSWG----DGDF--------GKLGH 3446

Query: 387  GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GN      P  +   +  + +QV+CGF H+  +
Sbjct: 3447 GNPDRQRRPRQIEALQTEQVVQVACGFKHSAVV 3479


>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
 gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
          Length = 667

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 169/360 (46%), Gaps = 38/360 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD G++G  +  +R  PV       + +  +  G   T+ L   G V+  G N+ G
Sbjct: 57  VWGQGDRGQIGDAAWNARNTPVQARGL--NDVMDIHTGVRSTMALRSDGTVWTWGSNENG 114

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLGI      ++ P  +SGL   +  IS G  +HS A+T +G ++ WGKN NG+LG G  
Sbjct: 115 QLGIGTTADKNV-PTPVSGLSG-IKAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTT 172

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V  LS + T  AA G+  S+A+   G + +WGA G+G LG G        
Sbjct: 173 VQQNSPV--LVIGLSDV-TAIAAGGY-YSLALKSDGTIWAWGANGNGELGDGT------- 221

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                ++TP  +  L  V + I A G  HS  I ++G V+ +G      +   +G    R
Sbjct: 222 --IVDKHTPVQVSGLSDV-IAITAGGS-HSLAIKQDGTVWAWGINMYGTL--GDGTRTNR 275

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
             P  +  L + + +  GG+H+  L   G ++ WG N  G LG+G      +PE++ G  
Sbjct: 276 TIPVKVRNLQHIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTG-- 333

Query: 339 SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            E  +D    G+   A   +G++  WGW          G +S GQ+G G   D   P + 
Sbjct: 334 IEHVLDIAGGGFHSAALKKDGRV--WGW----------GLNSSGQIGDGTRNDRNAPALT 381



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 148/303 (48%), Gaps = 20/303 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           WG+ + G+LG+G+   +  P   S      +KA++ G G H++ LTE G V+  G ND G
Sbjct: 108 WGSNENGQLGIGTTADKNVPTPVSGLS--GIKAISGGLGYHSMALTENGTVWTWGKNDNG 165

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG    +  +  P+ + GL  +V  I+ G ++S A+  DG ++ WG N NG+LG G   
Sbjct: 166 ELGNGTTVQQN-SPVLVIGLS-DVTAIAAGGYYSLALKSDGTIWAWGANGNGELGDGTIV 223

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            K  P+  +V  LS +    A  G   S+A+   G V +WG    G LG G         
Sbjct: 224 DKHTPV--QVSGLSDVIAITA--GGSHSLAIKQDGTVWAWGINMYGTLGDGTR------- 272

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  ++ L+   +K  A G  HS  +D+ G V+ +GD +  ++     +    P
Sbjct: 273 --TNRTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTP 328

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             ++ + +  ++  GG+H+  L   G ++ WG N +G +G G+ +  ++P   +     +
Sbjct: 329 EQLTGIEHVLDIAGGGFHSAALKKDGRVWGWGLNSSGQIGDGTRNDRNAPALTKAVLDTT 388

Query: 342 PVD 344
             D
Sbjct: 389 APD 391



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 32/294 (10%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALG 185
           ++  GY+H++++   G++Y+WG+   GQ+G     A+  P+  + +  +  I T     G
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGLNDVMDIHT-----G 92

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              ++A+   G V +WG+  +G+LG G          +  +  P  +  L G+K      
Sbjct: 93  VRSTMALRSDGTVWTWGSNENGQLGIGT---------TADKNVPTPVSGLSGIKAISGGL 143

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G+ HS  + ENG V+ +G     ++          P L+  L     +  GGY++  L S
Sbjct: 144 GY-HSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSDVTAIAAGGYYSLALKS 202

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
            G ++ WG+N NG LG G+I   H+P +V G    S V  ++ G  H+ AI +   + W 
Sbjct: 203 DGTIWAWGANGNGELGDGTIVDKHTPVQVSGL---SDVIAITAGGSHSLAIKQDGTV-WA 258

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           W          G +  G LG G   +   P  V   +++KA  ++ G +H+ AL
Sbjct: 259 W----------GINMYGTLGDGTRTNRTIPVKVRNLQHIKA--IAGGGHHSLAL 300



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 17/131 (12%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           ++V G YHT  L S G++Y WG  + G +G  + +  ++P + +G    + V  +  G +
Sbjct: 38  KLVAGYYHTASLVSSGDVYVWGQGDRGQIGDAAWNARNTPVQARGL---NDVMDIHTGVR 94

Query: 352 HTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
            T A+ S+G + TW            G +  GQLG G   D   PT V+    +KA+   
Sbjct: 95  STMALRSDGTVWTW------------GSNENGQLGIGTTADKNVPTPVSGLSGIKAISGG 142

Query: 411 CGFNHTGALLE 421
            G+ H+ AL E
Sbjct: 143 LGY-HSMALTE 152


>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
           partial [Apis florea]
          Length = 647

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 176/372 (47%), Gaps = 38/372 (10%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   V S F   +  + +++CG  H+  + ++G ++  G ND+GQLG+      S +P
Sbjct: 10  SRFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 68

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   TV  +++  G +  GQLG G  A   +  IP+    
Sbjct: 69  SCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSASIPVLVYD 128

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
              +G    Q   G   S+A+T  G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 129 SGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN--KPTKVHIPEP 186

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++          G+ HS  + ENG VY+ G+    K+        +      +LP   
Sbjct: 187 VKQIN--------TGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPV 238

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
             V CGG+HT +LT    LY  GSN +G LG+G+ +  LH P+ + +G      +  +SC
Sbjct: 239 IHVACGGHHTVILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISC 298

Query: 349 GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  HTA ++E GK+ T G  G H           G+LG   + + +H   + F +  K L
Sbjct: 299 GESHTAILTESGKLYTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRYKEL 344

Query: 408 ---QVSCGFNHT 416
               +SCG  HT
Sbjct: 345 FISNISCGGCHT 356



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 142/307 (46%), Gaps = 29/307 (9%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V+ IS G  HS+ I   G L+++G N  GQLGLG K    I  P+ V+ L       
Sbjct: 24  RDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH--ISKPSCVKVLKPEKVTH 81

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVK 239
            A G   ++  T   K+ + G+   G+LG G   S +G     S   P L+ +    G K
Sbjct: 82  VACGRAHTLICTVAEKIFACGSDQEGQLGRG--ISAIG----DSASIPVLVYDSGPTGSK 135

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGY 298
           +    AG  HS  +  +G V+ +G     ++ L        +P+ +      +++  G Y
Sbjct: 136 IVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINTGYY 195

Query: 299 HTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           H+  LT  G +Y  G +E+G LGI  +      P+++Q P   SPV  V+CG  HT  ++
Sbjct: 196 HSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLP---SPVIHVACGGHHTVILT 252

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFN 414
           E   L              G +S GQLG G +V  +H P ++  G  +N K   +SCG +
Sbjct: 253 EKDNLYCT-----------GSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGES 301

Query: 415 HTGALLE 421
           HT  L E
Sbjct: 302 HTAILTE 308


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 181/390 (46%), Gaps = 37/390 (9%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 3942 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 3999

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  +  L+  +++   +++G  H  A++ DGE++ WG+  +G+LG 
Sbjct: 4000 GRLGIGGTDSVS-APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4058

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG     
Sbjct: 4059 GNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD---- 4112

Query: 218  LGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+     
Sbjct: 4113 -----SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4167

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P++
Sbjct: 4168 DGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKK 4227

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            V        +  ++ G  H  A S+ G++ TWG             +  GQLG G     
Sbjct: 4228 VAA-LQGKKIISIATGSLHCVACSDSGEVFTWG------------DNDEGQLGDGTVTAI 4274

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGALLEY 422
              P +V   +    ++V CG  HT AL  Y
Sbjct: 4275 QRPRLVQSLQGKHIVKVICGSAHTLALSTY 4304



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 2896 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 2952

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2953 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3011

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3012 GHGNRLT--LEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3067

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+G +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3068 -------NCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3120

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3121 GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3180

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              +QG      V  V+ G  H  A+++ G++  WG         ++ H   GQ G GN V
Sbjct: 3181 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNTV 3227

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P +V   + V   +V+CG +H+ A
Sbjct: 3228 VNKKPNLVLGLDGVFVNRVACGSSHSVA 3255



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 161/347 (46%), Gaps = 51/347 (14%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            V   GLND  QLG             ++   L+P+ I+G  K +  +S           D
Sbjct: 2894 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------D 2943

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG      +P P +V  L+    K+ A+  G + ++A+T  GKV 
Sbjct: 2944 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3001

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG         R T E  P+LI+ L   +V+  A G  HSA I  +G +
Sbjct: 3002 SWGEGEDGKLGHGN--------RLTLE-KPKLIESLRTKRVRDIACGSSHSAAITSSGEL 3052

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L++ L      +V CG     T  LT  G +++WG  
Sbjct: 3053 YTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3112

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFS 374
            + G LG G  +    P +V+   +   V Q+ CG + + A+++ G++ TWG G  +    
Sbjct: 3113 DFGKLGRGGSEGCSVPHQVER-LNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYY---- 3167

Query: 375  EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3168 --------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3206



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 30/313 (9%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H + L+    V++ G  D G+LG  + +     P  I GL +K+V  I  G  
Sbjct: 572 AAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKE-HPTMIVGLHEKQVCGIYCGAS 630

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT+ GEL+ WG+ + G+LG G    K+  +PT+V+ L        ALG     S+ 
Sbjct: 631 YSAAITIAGELFTWGRGTYGRLGHGNSDDKL--VPTQVQALKSYKVVDVALGSGDAHSMC 688

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G + +WG G  G+LG+G                P  I  L  V V    +G   S 
Sbjct: 689 VTDNGLLFAWGDGDFGKLGNGS---------CNGSPIPVQIDTL--VNVSRIYSGSQFSV 737

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G +Y +G     ++      H+  P L+  L   +  +V  G  H   LTS GEL
Sbjct: 738 ALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGEL 797

Query: 310 YTWGSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCG------WKHTAAISEGK 360
           Y WG N+   +   G+    ++HSP     P     +  ++CG      W H++ +    
Sbjct: 798 YGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLR--ISGMTCGAAQSIVWCHSSTLGVAS 855

Query: 361 ILTWGWGGSHGTF 373
            + +    S  TF
Sbjct: 856 KIPFVVDLSEHTF 868



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 17/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD GRLG G   S+  P +     +  +  + CG +++  +T  G ++  G   +G+
Sbjct: 592 WGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGR 651

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N    L P ++  LK  +VV ++  +G  HS  +T +G L+ WG    G+LG G 
Sbjct: 652 LG-HGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGS 710

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 PIP +++ L  +   +   G + SVA++  G + +WG G  GRLGHG       
Sbjct: 711 CNGS--PIPVQIDTLVNV--SRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGN------ 760

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              S     P+L++ LEG K+   A G  H   +  +G +Y +G
Sbjct: 761 ---SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWG 801



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 131/299 (43%), Gaps = 32/299 (10%)

Query: 129  STGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            S+ Y    ++  +  ++ +WG N   QLG G K +KV  +PT    LS +     A G +
Sbjct: 2878 SSNYADDQSLNEISSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSK 2935

Query: 188  QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--A 245
                V+  GK+ + G G +GRLG G  +++          TPR +  L    VK  A  +
Sbjct: 2936 SLFIVSQDGKLYACGEGTNGRLGLGHNNNV---------PTPRQVPILNQYVVKKVAVHS 2986

Query: 246  GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
            G  H+  +  +G+V+ +G+    K+         +P LI  L      ++ CG  H+  +
Sbjct: 2987 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAI 3046

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGK 360
            TS GELYTWG  E G LG G       P+ V        V QV+CG +    +    EG 
Sbjct: 3047 TSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTT-LQGHRVVQVACGSRDAQTLCLTEEGL 3105

Query: 361  ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + +WG     G F        G+LG G       P  V    +V  +Q+ CG   + AL
Sbjct: 3106 VFSWG----DGDF--------GKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLAL 3152



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 114/270 (42%), Gaps = 73/270 (27%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            ++ WG N  GQLG G   ++ I +PT  E LS +   Q A G +   AVT  GK+ + G 
Sbjct: 3939 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 3996

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  GRLG G   S+           P L++ L+ V +K  A                   
Sbjct: 3997 GAGGRLGIGGTDSV---------SAPTLVESLQHVIIKKVA------------------- 4028

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                                         V  GG H   L+S GE+++WG  E+G LG G
Sbjct: 4029 -----------------------------VNSGGKHCLALSSDGEVFSWGEGEDGKLGHG 4059

Query: 324  SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 382
            + D    P+ ++   S   V  ++CG  H+A I S+G +LTWG G              G
Sbjct: 4060 NRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKG------------RYG 4106

Query: 383  QLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            +LGHG+  D + P +V      +A+ ++CG
Sbjct: 4107 RLGHGDSEDQLQPKLVEALLGYRAIDIACG 4136



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 132/354 (37%), Gaps = 94/354 (26%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
           ++ +AC   +   LT  G V++   N       SENI     P    GL+   VVQI+  
Sbjct: 525 VRQVACTENNIYILTTGGQVFSLHSNS------SENIA----PKAFEGLEGVHVVQIAAH 574

Query: 132 YH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA---LGF 186
               H   ++   E++ WG    G+LG G   +K  P       + G+  KQ      G 
Sbjct: 575 CEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPT-----MIVGLHEKQVCGIYCGA 629

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S A+T  G++ +WG G  GRLGHG          S  +  P  ++ L+  KV   A G
Sbjct: 630 SYSAAITIAGELFTWGRGTYGRLGHGN---------SDDKLVPTQVQALKSYKVVDVALG 680

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
                                                            G  H+  +T  
Sbjct: 681 ------------------------------------------------SGDAHSMCVTDN 692

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
           G L+ WG  + G LG GS +    P ++    +   V ++  G + + A+S +G + TWG
Sbjct: 693 GLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN---VSRIYSGSQFSVALSCDGTLYTWG 749

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G             GG+LGHGN      P +V   E  K   V+ G  H  AL
Sbjct: 750 KG------------HGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLAL 791



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLG G+ E    P +  A E   +  +A G AH L LT +G +Y  G ND+ Q
Sbjct: 748 WGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQ 807

Query: 103 L---GISEN------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           +   G+S +      I  +   LRISG+     Q S  + HSS + V  ++
Sbjct: 808 ICPSGVSRDPIIHSPILTTPPTLRISGMTCGAAQ-SIVWCHSSTLGVASKI 857



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 25/173 (14%)

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTCVLTSG 306
           S+C  E   +Y F   A +      G+  R  +   +LP +    +V C   +  +LT+G
Sbjct: 485 SSCSPE---MYGFMSEATNGTTQLMGSIPRYSAATIELPSTLQVRQVACTENNIYILTTG 541

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G++++  SN +  +   + + L     VQ            C  KH   +S    + W W
Sbjct: 542 GQVFSLHSNSSENIAPKAFEGLEGVHVVQI--------AAHCEGKHVMVLSSANEV-WSW 592

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G             GG+LGHG+ V   HPT++      +   + CG +++ A+
Sbjct: 593 GAG----------DGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAI 635


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +         IK+L        +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G      V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 31/245 (12%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
            G  H+    + G VY  G     ++ L    +      ++   P    +++  G   + 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 418
           + T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT  
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295

Query: 419 LLEYV 423
           L E V
Sbjct: 296 LTEKV 300



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           R+   +   + +I  AGF      + + + G V+ FG     K  F E       ++ SK
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  ++     CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++       
Sbjct: 68  FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEK 126

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNF 400
           V   +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F
Sbjct: 127 VKLAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 401 GENVKALQVSCGFNHTGALLE 421
                  Q+S G N + AL E
Sbjct: 175 TPADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 2/44 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTL 84
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHML 400


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2947 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 3006

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   IPIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3007 NGRLGLGLSSG-TIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3065

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3066 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3176

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3177 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3223

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3224 GHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTD 3260



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 153/329 (46%), Gaps = 23/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3003 GEATNGRLGLG-LSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3061

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3062 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3120

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
              A ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3121 DNATQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3175

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3176 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3229

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3230 HVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3289

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILT 363
            QG      + +V+CG  H+ A +   + T
Sbjct: 3290 QG-LEGQKITRVACGSSHSVAWTTVDVTT 3317



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 163/350 (46%), Gaps = 36/350 (10%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   ++K  V +++G  
Sbjct: 3980 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRK--VAVNSGGK 4037

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 4038 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4095

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 4096 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4146

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 4147 CLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAV 4206

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            YTWG  +   LG GS D +  P +VQG      V  ++ G  H    +E G++ TW    
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 4261

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                    G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 4262 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 132/291 (45%), Gaps = 18/291 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG   N      P  I  L+  EVV I+ G  
Sbjct: 4031 AVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDRPRVIESLRGVEVVDIAAGGA 4089

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG--IFTKQAALGFEQSVA 191
            HS+ IT  GEL+ WGK   G+LG G    ++ P    V+ L G  +       G  Q++ 
Sbjct: 4090 HSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDALQGHRVIDVACGSGDAQTLC 4147

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I  L G+ V     G   S 
Sbjct: 4148 LTDDDMVWSWGDGDYGKLGRGG---------SDGCKIPMKIDSLTGLGVTKVECGSQFSV 4198

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP  +  L   +   +  G  H    T  GE+
Sbjct: 4199 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4258

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            YTWG N+ G LG G+ + +  P R+        +++V+CG  HT A S  K
Sbjct: 4259 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGSAHTLAWSTSK 4308



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 23/267 (8%)

Query: 62  PVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           P++  +     +  LA    G H L L+  G V++ G  D G+LG  +   Y  EP  I+
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDAT-YLEEPTMIA 528

Query: 120 GLK-----KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
                   K VV I+ G  +S+ IT+DGELY WG+ + G+LG G    +  P+   V  L
Sbjct: 529 AFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPM--LVTAL 586

Query: 175 SGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            G+     A G    Q++AVT  G+V SWG G  G+LG G          S    TP+L+
Sbjct: 587 KGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLV 637

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           ++L+ + +     G   S  + ++G+VY +G     ++      H R P L+  L   + 
Sbjct: 638 EKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKV 697

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +V  G  H   LT  GE+++WGSN+ 
Sbjct: 698 VDVAVGSTHCLALTDDGEVHSWGSNDK 724



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4110

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4111 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    IP K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4169 -GSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4225

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4226 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4278

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 4279 RPRLVAALQGKKINRVACGSAHT 4301



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 135/271 (49%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3057 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3116

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3117 LGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3174

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3175 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3231

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + + G+VY +GD        Q+GN    
Sbjct: 3232 ------RKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTTT 3281

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3282 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3312



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 149/319 (46%), Gaps = 41/319 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C +     +  + C     L L+ +G VY                  +L P+ I  L
Sbjct: 428 PIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK-----------STTLAPMLIHSL 476

Query: 122 K-KEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++ +GE++ WG    G+LG G   A  +  PT +   +G  
Sbjct: 477 SSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGD--ATYLEEPTMIAAFNG-- 532

Query: 179 TKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            KQA       A G   S  +T  G++ +WG G  GRLGHG          S  + TP L
Sbjct: 533 -KQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS---------SEDQTTPML 582

Query: 232 IKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
           +  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL  
Sbjct: 583 VTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 642

Query: 290 SE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
            +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD V+
Sbjct: 643 LDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVD-VA 701

Query: 348 CGWKHTAAIS-EGKILTWG 365
            G  H  A++ +G++ +WG
Sbjct: 702 VGSTHCLALTDDGEVHSWG 720



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 31/288 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + +AF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 505 WGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVH-IACGSTYSAVITIDGELYTWGR 563

Query: 98  NDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
            ++G+L  G SE+    +    + GLK   V   +G   + A+T +G+++ WG    G+L
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKL 623

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG + 
Sbjct: 624 GRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDE 681

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML-FQE 274
            +           P+L+  L+G KV   A G  H   + ++G V+ +G    DK+  F  
Sbjct: 682 HV---------RFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN--DKLQHFDT 730

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            ++ ++P  +  L +   + CG          G+ + W S     +G+
Sbjct: 731 LSNKKQPKALPGLKHIVGISCG---------PGQSFAWSSCSEWSVGL 769



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2939 SAGTIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2996

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GK+ + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3048

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 3049 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3108

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3109 WGLGEYGRLGHGDNATQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3164

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3165 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3206



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 136/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3940 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3998

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 3999 YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4058

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4059 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4109

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4110 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4169

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4170 SDGCKIPMKIDS-LTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4216

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4217 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4248



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P +I    G +    V   A 
Sbjct: 494 LALSSNGEVFSWGCGDGGRLGHGD---------ATYLEEPTMIAAFNGKQAGKHVVHIAC 544

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 545 GSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTL 604

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ V+    +  + +V CG + + A++ +G+
Sbjct: 605 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQ 663

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G +             +LGHG D     P +++  +  K + V+ G  H  AL 
Sbjct: 664 VYTWGKGDNQ------------RLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALT 711

Query: 421 E 421
           +
Sbjct: 712 D 712



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHT 353
           G H   L+S GE+++WG  + G LG G    L  P  +    G  +   V  ++CG  ++
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 549

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A I+ +G++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 550 AVITIDGELYTWGRGNY------------GRLGHGSSEDQTTPMLVTALKGLKVVDVACG 597



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4209 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4268

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 4269 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4303


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 187/415 (45%), Gaps = 52/415 (12%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG 90
           +++ L+      WG+G+ G+LG+G  E +  P    A   +++ A+  G  ++L + + G
Sbjct: 1   MATPLRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDG 60

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGK 149
            ++  G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG 
Sbjct: 61  RLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWGG 120

Query: 150 NSNGQLGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           N  GQ G        G +A  + IPIP +  C   +  +Q A G   SV +T  G V +W
Sbjct: 121 NEYGQCGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTW 178

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G           +    G ++  S  TP  ++ LE  KV++ A G  H+  + E+  ++ 
Sbjct: 179 G-----------QPWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDVILWA 223

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G+    ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G 
Sbjct: 224 WGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAWGRGEHGR 283

Query: 320 LGIGSIDVLHS-PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           LG G     H  P +V+    E  V QVSCG  H+ A++ +G++ ++G  G H       
Sbjct: 284 LGFGDDKSSHMVPLKVELLAGEDIV-QVSCGGTHSVALARDGRMFSYG-RGDH------- 334

Query: 378 HSSGGQLGHGNDVDYIHPT--IVNFGE-------NVKALQVSCGFNHTGALLEYV 423
               G+LG+G  V   HP    +N            +A  V+CG  HT A+ E+ 
Sbjct: 335 ----GRLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIAEWT 385


>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
          Length = 1378

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 130/256 (50%), Gaps = 12/256 (4%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P    AFE   +  ++CG  H+L +   G V+A G    GQLGI E    S  P +I  
Sbjct: 87  KPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFTPQKIKA 146

Query: 121 LK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT 179
           L   +++Q+S GY+HS A++ DG+++ WGKNS+GQLGLGK+       P +V  L GI  
Sbjct: 147 LAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTS-PQRVRSLEGIPL 205

Query: 180 KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            Q A G   S A++  G    WG+  +G+L      ++ G       Y P  +  L+ + 
Sbjct: 206 AQVAAGGAHSFALSLSGTSFGWGSNSAGQL------ALSGTKAPVQRYKPLSVGALKTLG 259

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP-YSEEVVCGGY 298
           V   + G  H+A + +NG VY FG  +  ++        R P  + ++     ++ CG Y
Sbjct: 260 VVYISCGSEHTAVLTQNGAVYTFGANSSGQL--GHSAEQRGPQCVERIDGLVSQIDCGSY 317

Query: 299 HTCV-LTSGGELYTWG 313
           HT   + + G++ ++G
Sbjct: 318 HTLAYVYTTGQVVSFG 333



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 137/277 (49%), Gaps = 29/277 (10%)

Query: 105 ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           + E    S +P +I   +   V  +S G  HS A+   G ++ WG  S GQLG+G+   +
Sbjct: 78  LREESAPSSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKER 137

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P K++ L+GI   Q + G+  S+A++  G+V SWG    G+LG G+E         
Sbjct: 138 SF-TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVP------- 189

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF---QEGNHARR 280
            S+ +P+ ++ LEG+ +   AAG  HS  +  +G  + +G  +  ++     +      +
Sbjct: 190 -SQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPVQRYK 248

Query: 281 PSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P  +  L       + CG  HT VLT  G +YT+G+N +G LG       HS E+ +GP 
Sbjct: 249 PLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSSGQLG-------HSAEQ-RGPQ 300

Query: 339 SESPVD----QVSCGWKHTAA--ISEGKILTWGWGGS 369
               +D    Q+ CG  HT A   + G+++++G G S
Sbjct: 301 CVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFGHGPS 337



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 30/237 (12%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAHTLFLTE 88
           R FA  WG G  G+LG+G  + R       +F    +KALA        CG  H+L L+E
Sbjct: 117 RVFA--WGAGSEGQLGIGEFKER-------SFTPQKIKALAGIKIIQVSCGYYHSLALSE 167

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMW 147
            G V++ G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + W
Sbjct: 168 DGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGW 227

Query: 148 GKNSNGQLGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           G NS GQL L G KA      P  V  L  +     + G E +  +T  G V ++GA  S
Sbjct: 228 GSNSAGQLALSGTKAPVQRYKPLSVGALKTLGVVYISCGSEHTAVLTQNGAVYTFGANSS 287

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G+LGH  E           +  P+ ++ ++G+  +I    +   A +   G+V  FG
Sbjct: 288 GQLGHSAE-----------QRGPQCVERIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 333



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 13/183 (7%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            GEL+ WG+NS+GQLGLG+      P P  VE L+G+   Q + G   S+A++  G V SW
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSS-PTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW 971

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G    G+LG G          + S+ +P L++ L+  KV   A G  H+A + ++G V+ 
Sbjct: 972  GKNDFGQLGLGH---------TESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFT 1022

Query: 262  FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG-GELYTWGSNENG 318
            FG     ++         RP L+++L      ++ CG +HT    S  G+++ +GS +NG
Sbjct: 1023 FGAGKYGQLGHSSTRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNG 1082

Query: 319  CLG 321
             LG
Sbjct: 1083 QLG 1085



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 123/262 (46%), Gaps = 39/262 (14%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +++    +     + G E S+AV   G+V +WGAG  G+LG G+        RS   +
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKE-----RS---F 139

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISK 286
           TP+ IK L G+K+   + G+ HS  + E+G+V+ +G  +  ++ L +E      P  +  
Sbjct: 140 TPQKIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS 199

Query: 287 L---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP- 342
           L   P ++ V  GG H+  L+  G  + WGSN  G L +       +P +   P S    
Sbjct: 200 LEGIPLAQ-VAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTK---APVQRYKPLSVGAL 255

Query: 343 ----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
               V  +SCG +HTA +++         G+  TF   G +S GQLGH    +   P  V
Sbjct: 256 KTLGVVYISCGSEHTAVLTQ--------NGAVYTF---GANSSGQLGHS--AEQRGPQCV 302

Query: 399 NFGENVKAL--QVSCGFNHTGA 418
              E +  L  Q+ CG  HT A
Sbjct: 303 ---ERIDGLVSQIDCGSYHTLA 321



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 13/176 (7%)

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
            G ++A G N  GQLG+      S  P  +  L    +VQIS G  HS A+++ G +Y WG
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG 972

Query: 149  KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            KN  GQLGLG   +K    P+ +  L        A G   +  +T  G V ++GAG  G+
Sbjct: 973  KNDFGQLGLGHTESK--DSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS-ACIDENGRVYIFG 263
            LGH           +  E  P L+ EL G +V   A G  H+ A + E G+V+ FG
Sbjct: 1031 LGHSS---------TRDELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFG 1077



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 3/116 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  D+G+LGLG  ES+  P +  A +   +  LACGG+HT  LT+ G V+  G   +GQ
Sbjct: 971  WGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQ 1030

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG 156
            LG S      L P  ++ L    V QI+ G  H+ A   + G+++ +G   NGQLG
Sbjct: 1031 LGHSSTRD-ELRPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLG 1085



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 8/186 (4%)

Query: 43   WGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG   +G+LGLG +  S   P +        L  ++ G AH++ L+ TG VY+ G NDFG
Sbjct: 918  WGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWGKNDFG 977

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            QLG+          L  +   ++V  ++ G  H++ +T DG ++ +G    GQLG     
Sbjct: 978  QLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQDGLVFTFGAGKYGQLGHSSTR 1037

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVA-VTGGGKVLSWGAGGSGRLG----HGQESS 216
             ++   P  V  L G    Q A G   ++A V+  GKV ++G+G +G+LG    H Q +S
Sbjct: 1038 DEL--RPCLVTELLGNRVTQIACGRWHTLAYVSELGKVFAFGSGKNGQLGNCGTHNQPNS 1095

Query: 217  ILGFLR 222
             +   R
Sbjct: 1096 YVNLRR 1101



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 23/202 (11%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLIS 285
           P  I+  E ++V + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I 
Sbjct: 88  PEQIQAFETLRVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKERSFT--PQKIK 145

Query: 286 KLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESP 342
            L   +  +V CG YH+  L+  G++++WG N +G LG+G  +    SP+RV+      P
Sbjct: 146 ALAGIKIIQVSCGYYHSLALSEDGQVFSWGKNSHGQLGLGKEVPSQTSPQRVRS-LEGIP 204

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVN 399
           + QV+ G  H+ A+S     ++GWG           +S GQL   G    V    P  V 
Sbjct: 205 LAQVAAGGAHSFALSLSGT-SFGWGS----------NSAGQLALSGTKAPVQRYKPLSVG 253

Query: 400 FGENVKALQVSCGFNHTGALLE 421
             + +  + +SCG  HT  L +
Sbjct: 254 ALKTLGVVYISCGSEHTAVLTQ 275



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 14/128 (10%)

Query: 292  EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            ++  G  H+  L+  G +Y+WG N+ G LG+G  +   SP  ++   S+  VD ++CG  
Sbjct: 951  QISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQK-VDFLACGGS 1009

Query: 352  HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
            HTA ++ +G + T+G G              GQLGH +  D + P +V      +  Q++
Sbjct: 1010 HTALLTQDGLVFTFGAGKY------------GQLGHSSTRDELRPCLVTELLGNRVTQIA 1057

Query: 411  CGFNHTGA 418
            CG  HT A
Sbjct: 1058 CGRWHTLA 1065



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 13/116 (11%)

Query: 307  GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
            GEL+ WG N +G LG+G I       ++    +  P+ Q+S G  H+ A+S  G + +W 
Sbjct: 913  GELFAWGQNSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSW- 971

Query: 366  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       G +  GQLG G+      P+++   ++ K   ++CG +HT  L +
Sbjct: 972  -----------GKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLACGGSHTALLTQ 1016


>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
          Length = 364

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L     V   CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 44/312 (14%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            ++ +GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGALLEYV 423
           G  HT   L YV
Sbjct: 295 GSYHT---LAYV 303



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG    D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++  + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|403352920|gb|EJY75989.1| Kinesin motor domain containing protein [Oxytricha trifallax]
          Length = 1386

 Score =  119 bits (298), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 120/459 (26%), Positives = 186/459 (40%), Gaps = 94/459 (20%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            +WG+G  GR G G   S   P    A   H+   L+CG  H+  +T  G + + G   FG
Sbjct: 939  VWGSGKDGRCGNGKESSEKLP--NQANTSHNFTQLSCGYHHSAAVTSDGMILSWGRGIFG 996

Query: 102  QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            QLG  +   YSL P  I  L K +++Q+S G+ HS A++  G ++ WG   +GQLG G  
Sbjct: 997  QLGHGDTENYSL-PTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWGYGEDGQLGHGDT 1055

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG--GKVLSWGAGGSGRLG-HGQESSI 217
               ++P        + I     A G   S  +T G   ++  WG     RL     E+ +
Sbjct: 1056 NDYLLPKEIDFFRKNSINVGMIACGHSHSGCITDGQSSQLYLWGCNPDCRLMIEENENQL 1115

Query: 218  LGFLRSTSEYTPRLIK-----ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-- 270
            L  L    +   +  +     +LEG++    + G  H+A +  +G +Y  G     ++  
Sbjct: 1116 LPTLTILEQAKMKNYERGDQLKLEGLEPCYLSLGVTHTAIVTRSGELYTGGSMLDGQLGV 1175

Query: 271  --------------------LFQEGNHA------------------RRPSLISKLPYSEE 292
                                L  E N +                   R    S    + +
Sbjct: 1176 NYEAAKNDQSYPSSLSNTHQLINESNSSFINQFKDQKELKSQSLPIYRVDFFSAQNKATQ 1235

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGI---------------------------GSI 325
            V CG   T VL    E+Y +G   +G LG+                           GS 
Sbjct: 1236 VSCGDAFTIVLNERNEVYAFGKLSHGRLGVGNGQNLNQQKTNQLKQSIQNQTYQSTEGSN 1295

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            D +  P+ +Q       V Q+S G +H A +++ GK+  WG+      F E       QL
Sbjct: 1296 DCIAEPQLLQSLSQSEKVVQISAGCRHAACVTDSGKLYAWGF-----NFYE-------QL 1343

Query: 385  GHGN-DVDYIHPTIVNFG-ENVKALQVSCGFNHTGALLE 421
            G G+ + D+  PT V+ G ++ K   VSCG+ HTGAL++
Sbjct: 1344 GLGDSEKDFDVPTKVSKGLQSSKVKFVSCGYFHTGALVQ 1382



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 31/187 (16%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG   +G+ G GK++++ +P        S  FT Q + G+  S AVT  G +LSWG
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPNQANT---SHNFT-QLSCGYHHSAAVTSDGMILSWG 991

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
             G  G+LGHG           T  Y+ P  I+ L  +++   + G+ HS  +   GR++ 
Sbjct: 992  RGIFGQLGHG----------DTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFS 1041

Query: 262  FG---------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG--GELY 310
            +G             D +L +E +  R+ S+   +     + CG  H+  +T G   +LY
Sbjct: 1042 WGYGEDGQLGHGDTNDYLLPKEIDFFRKNSINVGM-----IACGHSHSGCITDGQSSQLY 1096

Query: 311  TWGSNEN 317
             WG N +
Sbjct: 1097 LWGCNPD 1103



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 18/114 (15%)

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAI-SEGKILTWG 365
            +++ WGS ++G  G G      S E++    + S    Q+SCG+ H+AA+ S+G IL+WG
Sbjct: 936  KVFVWGSGKDGRCGNGK----ESSEKLPNQANTSHNFTQLSCGYHHSAAVTSDGMILSWG 991

Query: 366  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G F        GQLGHG+  +Y  PT +     ++ +QVSCG+ H+ AL
Sbjct: 992  ----RGIF--------GQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMAL 1033



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 21/177 (11%)

Query: 197  KVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            KV  WG+G  GR G+G+ESS  L    +TS    +L            + G+ HSA +  
Sbjct: 936  KVFVWGSGKDGRCGNGKESSEKLPNQANTSHNFTQL------------SCGYHHSAAVTS 983

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G +  +G     ++   +  +   P+ I  L   +  +V CG  H+  L+S G +++WG
Sbjct: 984  DGMILSWGRGIFGQLGHGDTENYSLPTPIEALVKIQIIQVSCGWQHSMALSSQGRIFSWG 1043

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVD--QVSCGWKHTAAISEG---KILTWG 365
              E+G LG G  +    P+ +   F ++ ++   ++CG  H+  I++G   ++  WG
Sbjct: 1044 YGEDGQLGHGDTNDYLLPKEIDF-FRKNSINVGMIACGHSHSGCITDGQSSQLYLWG 1099


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 127/435 (29%), Positives = 187/435 (42%), Gaps = 59/435 (13%)

Query: 12  YYLKQDIKLGSK-----LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCS 66
           Y L Q+ +  SK     +G+ +  +    Q  ++  WG G   +LG G LE    P +  
Sbjct: 199 YELLQEYRASSKETMSMVGLREVVVDDVEQELWS--WGAGTDAQLGTGRLEDNNLPQLVR 256

Query: 67  AFEKHSLKA---LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK 123
                S  A   L+CGGAH + LT  G V   G  + GQLG+ + I  SL P  +  L  
Sbjct: 257 TPSLSSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMIS-SLHPKPVMRLGS 315

Query: 124 E-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
             +  +S G+ HS  ++ +G+LY  G  S GQLG G    +    P +V   S     + 
Sbjct: 316 YFITHVSAGWSHSGFVSDEGKLYTCGDGSFGQLGHGDYQLRC--FPEEVLFFSDKHVDKI 373

Query: 183 ALGFEQSVAV---TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
           A G   S+A+   + G +V  +GAG  G+LG  ++   +          P L   LE  +
Sbjct: 374 ACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNL--------PILSSNLEAAE 425

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           +   AAG  HSA +   G +Y +G             H   PS  SK      V  G  H
Sbjct: 426 IVGIAAGGDHSAALSAEGHLYTWGRGFKSTSDVYSPQHLPSPSSFSK------VALGWNH 479

Query: 300 TCVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESP------VDQVSCG 349
             VLT  GELY  G   +G L     + S+  L    R +  F   P      V  ++ G
Sbjct: 480 ALVLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSR-EDNFQAVPALSGIKVLDIAAG 538

Query: 350 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA-- 406
            +H+  ++E G + TWGWG              GQLG G+  D+ +P  VN    +++  
Sbjct: 539 AEHSVIVTEDGGVKTWGWG------------EHGQLGLGDTCDHTNPQTVNLNLKLESTA 586

Query: 407 --LQVSCGFNHTGAL 419
             ++V CG   T A+
Sbjct: 587 YDVKVYCGSGFTVAV 601



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 17/145 (11%)

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGP 337
           R PSL S  P    + CGG H   LT+GG + TWG   +G LG+G  I  LH P+ V   
Sbjct: 256 RTPSL-SSAPAISFLSCGGAHVIALTAGGGVLTWGRGNSGQLGLGDMISSLH-PKPVMR- 312

Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
                +  VS GW H+  +S EGK+ T G G            S GQLGHG+      P 
Sbjct: 313 LGSYFITHVSAGWSHSGFVSDEGKLYTCGDG------------SFGQLGHGDYQLRCFPE 360

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V F  +    +++CG  H+ AL++
Sbjct: 361 EVLFFSDKHVDKIACGMRHSLALVK 385


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 180/390 (46%), Gaps = 65/390 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G+LG G  E+R  P   +    H+L +       +  L+ T           GQ
Sbjct: 52  WGRGSSGQLGGGIEETRLYPSPVANL--HALPS-------SFSLSPTP----------GQ 92

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ--ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           L I +N   ++        K+E ++  IS G  HS A+ VDG +++WGK   G+LG G +
Sbjct: 93  LLI-KNQNSTIT-------KQEAIEVGISCGLFHS-ALLVDGNIWIWGKGDGGRLGFGHE 143

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +PT    L     K  ALG   SVA+T  G+V +WG GG G LGH         
Sbjct: 144 --NPVFVPTLNPNLDP--AKCVALGGVHSVALTSLGQVFTWGYGGFGALGH--------- 190

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------Q 273
                E  PRL++ +   K++  A    H+A I E G VY +G    D  L         
Sbjct: 191 CVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPN 250

Query: 274 EGNHARRPSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           EG     PS +  L      V CGG+ T VLT  G+++ WG+N N  LG G+      P+
Sbjct: 251 EGGGLSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPK 310

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +        V Q++ G  H+ A++ EGK+L+WG+GG             GQLGH +  +
Sbjct: 311 PIPN-LEGVRVIQIASGGYHSLALTDEGKVLSWGFGGH------------GQLGHPSIQN 357

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGALLE 421
              P +++   + + + ++CG + + A+ +
Sbjct: 358 QKIPMVIDALADQRVVYIACGGSTSAAITD 387



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 136/291 (46%), Gaps = 25/291 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G     + P +    +    K +A GG H++ LT  G V+  G   FG
Sbjct: 129 IWGKGDGGRLGFGHENPVFVPTLNPNLDP--AKCVALGGVHSVALTSLGQVFTWGYGGFG 186

Query: 102 QLGISENIGYSLE--PLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG   +  Y  E  P  + G+  E ++ I+T   H++AIT  GE+Y WG++        
Sbjct: 187 ALG---HCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGL 243

Query: 159 KKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
                      + IP+KV+ L+         GF  +V +T  G++ +WGA  +  LG G 
Sbjct: 244 GPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFFTAV-LTEEGQIWNWGANSNYELGRGN 302

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +         T  + P+ I  LEGV+V   A+G  HS  + + G+V  +G     ++   
Sbjct: 303 K---------TGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHP 353

Query: 274 EGNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI 322
              + + P +I  L     V   CGG  +  +T  G+LY WG+ ++  LG+
Sbjct: 354 SIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGV 404



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 116/246 (47%), Gaps = 20/246 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG G +G LG         P +        ++ +A  G HT  +TETG VY  G ++   
Sbjct: 180 WGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDG 239

Query: 100 ----FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                   G +E  G S+ P ++  L   V  +  G   ++ +T +G+++ WG NSN +L
Sbjct: 240 RLGLGPGRGPNEGGGLSI-PSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSNYEL 298

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G K     P P  +  L G+   Q A G   S+A+T  GKVLSWG GG G+LGH    
Sbjct: 299 GRGNKTGGWQPKP--IPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGH---P 353

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           SI       ++  P +I  L   +V   A G   SA I + G++Y++G+ A D  L   G
Sbjct: 354 SI------QNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGN-AKDSQLGVPG 406

Query: 276 NHARRP 281
               +P
Sbjct: 407 LPEVQP 412



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG      LG G+    W+P      E   +  +A GG H+L LT+ G V + G    GQ
Sbjct: 290 WGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQ 349

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +I     P+ I  L  + VV I+ G   S+AIT +G+LYMWG   + QLG+    
Sbjct: 350 LG-HPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNAKDSQLGV-PGL 407

Query: 162 AKVIPIPTKVECL 174
            +V P P +V  L
Sbjct: 408 PEVQPCPVEVVFL 420


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG  +
Sbjct: 52  GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            N G+    +  + + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  P
Sbjct: 112 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 169

Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 170 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 220

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
           + TP  I  L+G++V+  A G+ H+  + + G++Y +G  +  ++     ++   P+  +
Sbjct: 221 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 280

Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           + K    E   C   HT    T  G++Y WG
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ TE   V+  G+N  G LG  + +  ++E
Sbjct: 6   KWPIFSLCSPEEIKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G      +P      
Sbjct: 65  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 K+ +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 175 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACH 293

Query: 350 WKHTAA--ISEGKILTWG 365
             HT+A     G++  WG
Sbjct: 294 SAHTSAAKTQSGQVYMWG 311



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   +V   G   SG LG G        ++ST E  PR +  L G K+   + G   H  
Sbjct: 38  TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
              E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS GE
Sbjct: 89  LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           +YTWG N +G +G GS      P RV        V  ++CG   + A+ E G++  WG+ 
Sbjct: 149 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYN 208

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 209 GN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 250



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 127/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T  
Sbjct: 38  TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +   GF+        ++   L   KV   A G  HS  +  
Sbjct: 94  GEVYTWGHNAYSQLGNGTTNH--GFVPC------QVSTNLVNKKVIEVACGSHHSMVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 146 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVW 205

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG+I  WG      
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG------ 258

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 299



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  V++I+  +  H S+A T  G++YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312


>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Acyrthosiphon pisum]
          Length = 505

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 159/318 (50%), Gaps = 26/318 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G   +G+LGLG  E+ ++P    + +   +K +ACG +HT+  TE   VY  G N  GQ
Sbjct: 58  FGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNSDGQ 117

Query: 103 LGIS-ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-- 158
           LG S  ++ +S  P+ ++    K ++Q+S G +H++A+  +G++Y+WG NS+ QLGL   
Sbjct: 118 LGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSM 177

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              +  + +PT V     +     + G   +  VT  G + + G    G+LGHG  S   
Sbjct: 178 DDDSVNVSVPTIVPIALPVL--YVSCGHTHTAFVTRIGDLYTCGDREYGKLGHGLWS--- 232

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
               S  + T +++K          + G  H+  +++ G+V++ G+    ++  +     
Sbjct: 233 ---LSRVDTTEKIVK---------VSCGANHTIALNDAGKVFVCGNNDCGQIGLRNVTSQ 280

Query: 279 --RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
               P  I+  P   ++VCG  H+  +T+ G+L+  G  + G LGI  ++ + +P  V  
Sbjct: 281 GHLYPCPITNEPIV-QIVCGQSHSAFITASGKLFMCGDGKYGKLGI-DVNQITTPTLVLA 338

Query: 337 PFSES-PVDQVSCGWKHT 353
              ++  V  VSCG  HT
Sbjct: 339 FVDKNLNVQMVSCGGNHT 356



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 158/354 (44%), Gaps = 49/354 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           ++CG  H+  + + G V+  G N FGQLG+  +EN+    +P  +  LK + V+ I+ G 
Sbjct: 39  ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENV---YKPNCVKSLKPDKVKHIACGR 95

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            H+   T +  +Y +G NS+GQLG          +P +V   +     Q + G   + A+
Sbjct: 96  SHTIVSTENNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAAL 155

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V  WG+    +LG            S +   P ++     + V   + G  H+A 
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDD-----DSVNVSVPTIVP--IALPVLYVSCGHTHTAF 208

Query: 253 IDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
           +   G +Y  GDR   K+   L+           +S++  +E++V   CG  HT  L   
Sbjct: 209 VTRIGDLYTCGDREYGKLGHGLWS----------LSRVDTTEKIVKVSCGANHTIALNDA 258

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
           G+++  G+N+  C  IG  +V         P +  P+ Q+ CG  H+A I+  GK+   G
Sbjct: 259 GKVFVCGNND--CGQIGLRNVTSQGHLYPCPITNEPIVQIVCGQSHSAFITASGKLFMCG 316

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYI-HPTIV--NFGENVKALQVSCGFNHT 416
            G              G+LG   DV+ I  PT+V     +N+    VSCG NHT
Sbjct: 317 DGKY------------GKLGI--DVNQITTPTLVLAFVDKNLNVQMVSCGGNHT 356



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 150/341 (43%), Gaps = 48/341 (14%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG V+      +G+   ++NI     P         V++IS G  HS  +  +G ++
Sbjct: 7   IPETGAVFT-----YGKSSFADNI-----PSHFFIRNDPVIEISCGEEHSGIVCKNGRVF 56

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +GKNS GQLGLG    + +  P  V+ L     K  A G   ++  T    V  +G   
Sbjct: 57  CFGKNSFGQLGLGH--TENVYKPNCVKSLKPDKVKHIACGRSHTIVSTENNIVYGFGDNS 114

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG             T    P  +       +   +AG  H+A + ENG VY++G  
Sbjct: 115 DGQLGQ-------SVADVTHSDVPIEVTRFNDKNIIQLSAGSYHTAALLENGDVYVWGSN 167

Query: 266 AVDKM-LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
           +  ++ L    + +   S+ + +P +  V+   CG  HT  +T  G+LYT G  E G LG
Sbjct: 168 SDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIGDLYTCGDREYGKLG 227

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
            G    L S  RV    +   + +VSCG  HT A+++ GK+               G++ 
Sbjct: 228 HG----LWSLSRVD---TTEKIVKVSCGANHTIALNDAGKVFVC------------GNND 268

Query: 381 GGQLGHGNDVD--YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            GQ+G  N     +++P  +    N   +Q+ CG +H+  +
Sbjct: 269 CGQIGLRNVTSQGHLYPCPIT---NEPIVQIVCGQSHSAFI 306



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 16/133 (12%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           E+ CG  H+ ++   G ++ +G N  G LG+G  + ++ P  V+       V  ++CG  
Sbjct: 38  EISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKS-LKPDKVKHIACGRS 96

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH---PTIVNFGENVKALQ 408
           HT   +E  I+ +G+G +          S GQLG     D  H   P  V    +   +Q
Sbjct: 97  HTIVSTENNIV-YGFGDN----------SDGQLGQSV-ADVTHSDVPIEVTRFNDKNIIQ 144

Query: 409 VSCGFNHTGALLE 421
           +S G  HT ALLE
Sbjct: 145 LSAGSYHTAALLE 157


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 154/338 (45%), Gaps = 31/338 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 116 WGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNI 175

Query: 101 GQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG    ++V  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 176 GLLGHGTDLSHWI-PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHG 234

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +  IP P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 235 NRES--IPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKH 292

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +              P  +  L        A G   +  +  +G+V+  G+  V
Sbjct: 293 RLGHGDKEP---------RVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGN-TV 342

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+  +      +V CG YH  VLT   E++TWG   NG LG G I
Sbjct: 343 YGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDI 402

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           +    P  V+    +  V  ++CG   TAAI + K ++
Sbjct: 403 EDRKIPTLVE-VLRDRGVRHIACGANFTAAICQRKWMS 439



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 163/366 (44%), Gaps = 48/366 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           + CG  H   +T+ G V+  G    G+LG      Y + P  +  L    V  ++ G  H
Sbjct: 97  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDY-IHPSLVESLAVSNVDFVACGEFH 155

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G   +    IP ++   L G      + G   +  
Sbjct: 156 TCAVTTAGELYTWGDGTHNIGLLGHGTDLSHW--IPKRISGALEGQQVAYVSCGTWHTAL 213

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G++ ++G G  G LGHG   SI           PR ++ L G+K    A G  H+A
Sbjct: 214 ITSTGQLFTFGDGTFGVLGHGNRESI---------PCPREVESLSGLKTIAVACGVWHTA 264

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCG 296
            + E           +G+++ +GD   DK     G+   R  P+ ++ L  Y    + CG
Sbjct: 265 AVVEVIVTQSSSSISSGKLFTWGDG--DKHRLGHGDKEPRVKPTCVASLIDYDFHRIACG 322

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G+++  G+   G LG    D    P  V+    E+ V QV+CG  H A +
Sbjct: 323 HSLTVGLTTSGQVWGMGNTVYGQLGNPRSDG-KLPCLVEDIMGENVV-QVACGSYHVAVL 380

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + + ++ TWG G +            G+LGHG+  D   PT+V    +     ++CG N 
Sbjct: 381 TVKSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANF 428

Query: 416 TGALLE 421
           T A+ +
Sbjct: 429 TAAICQ 434



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/214 (35%), Positives = 107/214 (50%), Gaps = 22/214 (10%)

Query: 219 GFLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
             +RST  +   L K LE    + V     G  H+A + +NG V+ +G+ +  ++     
Sbjct: 70  AVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSR 129

Query: 276 NHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-S 330
                PSL+  L  S  + V CG +HTC +T+ GELYTWG  ++  G LG G+ D+ H  
Sbjct: 130 EDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGT-DLSHWI 188

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P+R+ G      V  VSCG  HTA I S G++ T+G     GTF        G LGHGN 
Sbjct: 189 PKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFG----DGTF--------GVLGHGNR 236

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
                P  V     +K + V+CG  HT A++E +
Sbjct: 237 ESIPCPREVESLSGLKTIAVACGVWHTAAVVEVI 270


>gi|391344902|ref|XP_003746733.1| PREDICTED: LOW QUALITY PROTEIN: RCC1 and BTB domain-containing
           protein 1-like [Metaseiulus occidentalis]
          Length = 550

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  Y ++G         PV+   F++  +  +ACGG H++  T +G VY  G N+ GQ
Sbjct: 121 WGHNGYSQVGNDQNSQANSPVL--VFDRQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQ 178

Query: 103 LGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG+S ++ +   P ++ G   E+    IS G++ ++A+   GE+Y+WG N NGQLGLG  
Sbjct: 179 LGLSASVNHQ-SPRKVGGAIAEMKCTGISCGHNFTTAVFDTGEVYVWGSNGNGQLGLGSL 237

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P P K+E L  +F K+ A GF  ++A+T  G V  WGA   G+LG   +      
Sbjct: 238 TNQ--PFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENK------ 289

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
              T++  P L+K + G   ++AA  +   SA + E  +V ++G
Sbjct: 290 ---TNQSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWG 330



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 165/370 (44%), Gaps = 42/370 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQ 102
           G+   G LG+G   S   P       K  +++ ACG G H L LT  G VY  G N + Q
Sbjct: 69  GSNAAGCLGIGDTRSCLSPTKVEGLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQ 128

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G  +N   +  P+ +   ++ V QI+ G +HS   TV G +Y WG+N+ GQLGL     
Sbjct: 129 VGNDQN-SQANSPVLVFD-RQPVAQIACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVN 186

Query: 163 KVIPIPT-----KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              P        +++C +GI     + G   + AV   G+V  WG+ G+G+LG       
Sbjct: 187 HQSPRKVGGAIAEMKC-TGI-----SCGHNFTTAVFDTGEVYVWGSNGNGQLG------- 233

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
           LG L  T++  P  I++L+ V +K  A GF H+  + + G VY++G  A+ ++  +   +
Sbjct: 234 LGSL--TNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALGQLGTENKTN 291

Query: 278 ARRPSLISKLP-YSEEVVCGGYH--TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              P L+  +     EV    Y+  +  +T   ++  WG      + + +     S   V
Sbjct: 292 QSIPVLMKTIHGRINEVAATQYNQTSAAMTETSKVLMWGLCRGQHVTVPTETPFDSVHDV 351

Query: 335 QGPFSESPVDQVSC----GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              FS  PV  V       W++  A++  +            F    HS    L  G  +
Sbjct: 352 FVAFSSVPVTPVPMIVRSVWENKLALAMAE-----------HFDNPAHSDLKFLVEGKKI 400

Query: 391 DYIHPTIVNF 400
            ++H T++ F
Sbjct: 401 -HVHKTVLKF 409



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 114/250 (45%), Gaps = 27/250 (10%)

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L  +F+  A     +++ VT   +V + G+  +G LG G   S L         +P  ++
Sbjct: 45  LCCVFSSSAT----EALLVTEEDEVWAMGSNAAGCLGIGDTRSCL---------SPTKVE 91

Query: 234 ELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
            L    V+  A G   H   +   G VY +G     ++   + + A  P L+       +
Sbjct: 92  GLSKKGVQSFACGTGPHVLALTARGEVYGWGHNGYSQVGNDQNSQANSPVLVFDRQPVAQ 151

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CGGYH+ + T  G +YTWG N  G LG+ +     SP +V G  +E     +SCG   
Sbjct: 152 IACGGYHSVIRTVSGGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCTGISCGHNF 211

Query: 353 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           T A+ + G++  WG  G+            GQLG G+  +   P  +   ++V   +V+C
Sbjct: 212 TTAVFDTGEVYVWGSNGN------------GQLGLGSLTNQPFPVKIEQLKDVFIKKVAC 259

Query: 412 GFNHTGALLE 421
           GF+HT AL +
Sbjct: 260 GFSHTLALTD 269



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 132/298 (44%), Gaps = 40/298 (13%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITV 140
           L +TE   V+A G N  G LGI +     L P ++ GL K+ VQ     TG  H  A+T 
Sbjct: 57  LLVTEEDEVWAMGSNAAGCLGIGDTRS-CLSPTKVEGLSKKGVQSFACGTG-PHVLALTA 114

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA----ALGFEQSVAVTGGG 196
            GE+Y WG N   Q+G  + +    P+         +F +Q     A G   SV  T  G
Sbjct: 115 RGEVYGWGHNGYSQVGNDQNSQANSPVL--------VFDRQPVAQIACGGYHSVIRTVSG 166

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI-KELEGVKVKIAAAGFLHSACIDE 255
            V +WG    G+         LG   S +  +PR +   +  +K    + G   +  + +
Sbjct: 167 GVYTWGQNNCGQ---------LGLSASVNHQSPRKVGGAIAEMKCTGISCGHNFTTAVFD 217

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWG 313
            G VY++G     ++      +   P  I +L   + ++V CG  HT  LT  G +Y WG
Sbjct: 218 TGEVYVWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWG 277

Query: 314 SNENGCLGI-----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           +N  G LG       SI VL   + + G  +E    Q +   + +AA++E  K+L WG
Sbjct: 278 ANALGQLGTENKTNQSIPVLM--KTIHGRINEVAATQYN---QTSAAMTETSKVLMWG 330



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 33/267 (12%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E++  G N+ G LG+G   + + P  TKVE LS    +  A G     +A+T  G
Sbjct: 59  VTEEDEVWAMGSNAAGCLGIGDTRSCLSP--TKVEGLSKKGVQSFACGTGPHVLALTARG 116

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V  WG  G  ++G+ Q S            +P L+ + + V  +IA  G+ HS     +
Sbjct: 117 EVYGWGHNGYSQVGNDQNS---------QANSPVLVFDRQPV-AQIACGGY-HSVIRTVS 165

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPS----LISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           G VY +G     ++      + + P      I+++  +  + CG   T  +   GE+Y W
Sbjct: 166 GGVYTWGQNNCGQLGLSASVNHQSPRKVGGAIAEMKCT-GISCGHNFTTAVFDTGEVYVW 224

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           GSN NG LG+GS+     P +++    +  + +V+CG+ HT A++ EG +  W       
Sbjct: 225 GSNGNGQLGLGSLTNQPFPVKIE-QLKDVFIKKVACGFSHTLALTDEGLVYVW------- 276

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                G ++ GQLG  N  +   P ++
Sbjct: 277 -----GANALGQLGTENKTNQSIPVLM 298



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 13/140 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+   G+LGLGSL ++  PV     +   +K +ACG +HTL LT+ G VY  G N  G
Sbjct: 223 VWGSNGNGQLGLGSLTNQPFPVKIEQLKDVFIKKVACGFSHTLALTDEGLVYVWGANALG 282

Query: 102 QLGISENIGYSLEPLR--ISGLKKEVVQISTGYHHSS-AITVDGELYMWGKNSNGQLGLG 158
           QLG       S+  L   I G   EV   +T Y+ +S A+T   ++ MW        GL 
Sbjct: 283 QLGTENKTNQSIPVLMKTIHGRINEVA--ATQYNQTSAAMTETSKVLMW--------GLC 332

Query: 159 KKAAKVIPIPTKVECLSGIF 178
           +     +P  T  + +  +F
Sbjct: 333 RGQHVTVPTETPFDSVHDVF 352


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 1525

 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 101/329 (30%), Positives = 157/329 (47%), Gaps = 25/329 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG  DY +LGLG   +R  P         ++ ++A G   +L L   G ++A G N +G
Sbjct: 90  VWGRNDYNQLGLGDDINRLAPEQAPVVS--NIVSVAAGRLFSLALASDGSLWAWGGNYYG 147

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+ +N    L P +  GL  +V  I+ G +H+ A T  GE++  G+N +GQLG     
Sbjct: 148 QLGMGDN-DNRLTPSKTPGLS-DVAAIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDH 205

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           A     P +V  LS +  K  A G   S+A+   G V +WG   S +LG G        +
Sbjct: 206 ADA---PVQVAGLSNV--KSVAAGEFFSLALKNDGTVWAWGNNESAQLGTG--------I 252

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
              +  TP  I  L  +     AAG  H+  + E+G V+ +G     ++ F +    + P
Sbjct: 253 AGEAVATPAPIAVLSNITA--IAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +S L     +  G +H+  LTS G L+ WG+N +G LG  +      P +V    S S
Sbjct: 311 GRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVS---SIS 367

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
                + G +H+ AI ++G +  W WGG+
Sbjct: 368 NAVSFAGGQRHSLAIAADGSV--WSWGGN 394



 Score =  113 bits (283), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 81/284 (28%), Positives = 138/284 (48%), Gaps = 21/284 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG+G  ++R  P          + A+A G  H L  T++G V+A G ND GQ
Sbjct: 141 WGGNYYGQLGMGDNDNRLTPSKTPGLS--DVAAIAGGDYHALAATQSGEVWAMGRNDHGQ 198

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +  ++  P++++GL   V  ++ G   S A+  DG ++ WG N + QLG G  A 
Sbjct: 199 LGFTGD--HADAPVQVAGLSN-VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGI-AG 254

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +  P  +  LS I     A G   ++A+   G V +WGA GSG+LG G          
Sbjct: 255 EAVATPAPIAVLSNI--TAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFE------- 305

Query: 223 STSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                TP+    +  +  V   A+G+ HS  +  +G ++ +G+    ++     +    P
Sbjct: 306 -----TPKAPGRVSSLADVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLP 360

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           + +S +  +     G  H+  + + G +++WG N  G LG+ S+
Sbjct: 361 AQVSSISNAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLGVESL 404



 Score =  112 bits (280), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 96/311 (30%), Positives = 146/311 (46%), Gaps = 26/311 (8%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGYH 133
            +A G  H L L   G V++ G N  GQLG+  +  YS +  P +I+ +   V  I+ G  
Sbjct: 1038 IAAGDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-VAAIACGGS 1096

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            HS A+  DG L+ WG N  GQLGLG   +K  P   KV  +S +     A G   S+A+T
Sbjct: 1097 HSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTP--QKVNAISNV--AAIAAGEYYSLALT 1152

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G V SWG    G+LG G          +    TP+ ++ L  V     AAG  HS  +
Sbjct: 1153 RDGSVWSWGDNSDGQLGLGD---------NEDRNTPQKVEVLSNVAA--IAAGEDHSLAL 1201

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
              +G V+ +G  +  ++   + +    P  ++ +   + +  G  H+  ++  G  + WG
Sbjct: 1202 TRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKAIAAGNSHSFAISEEGLAWAWG 1261

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
             N +G LGIG+   L +    Q     S V  +S G  H+ A++E   L W WG      
Sbjct: 1262 YNYDGQLGIGTSGSLANENTPQKVKVISNVVGLSGGNYHSLALTEDGAL-WAWGD----- 1315

Query: 374  SEDGH--SSGG 382
            ++DG   S+GG
Sbjct: 1316 NDDGQIGSTGG 1326



 Score =  111 bits (277), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 95/321 (29%), Positives = 147/321 (45%), Gaps = 29/321 (9%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE--PLRISGLKKEVVQISTGY 132
           ++A GG H L L   G V++ G N  GQLG+     YS E  P +I+ +   V  I+ G 
Sbjct: 548 SIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISN-VAAIACGG 606

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            HS A+  DG  + WG N  GQLGLG   +K    P KV  LS +    A  G   S+A+
Sbjct: 607 SHSLALARDGSFWSWGYNYYGQLGLGDNVSKT--TPRKVNALSNVVAMAA--GDRHSLAL 662

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G + SWG    G+LG G          +    TPR +  +  V     AAG+ HS  
Sbjct: 663 TLDGSLWSWGDNTYGQLGLGD---------NDHRNTPRKVNAISNVVA--IAAGYRHSLA 711

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V+ +G+    ++   + +    P  ++ +   + +  G  ++  ++  G ++ W
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNIKAIAVGNNYSIAISEEGLVWAW 771

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           G N +G LGIG+   L      Q     S V  +S G  H+ A++E   L W W      
Sbjct: 772 GYNCSGQLGIGTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTEDGAL-WAW------ 824

Query: 373 FSEDGHSSGGQLGHGNDVDYI 393
               G++  GQ+     ++YI
Sbjct: 825 ----GNNEAGQIAAEEAIEYI 841



 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 80/252 (31%), Positives = 124/252 (49%), Gaps = 24/252 (9%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           ++ A+ACGG+H+L L   G  ++ G N +GQLG+ +N+  +  P +++ L   VV ++ G
Sbjct: 598 NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKT-TPRKVNALSN-VVAMAAG 655

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+T+DG L+ WG N+ GQLGLG    +    P KV  +S +     A G+  S+A
Sbjct: 656 DRHSLALTLDGSLWSWGDNTYGQLGLGDNDHR--NTPRKVNAISNVVA--IAAGYRHSLA 711

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G V SWG    G+LG G          +    TP+ +  +  +K    A G  +S 
Sbjct: 712 LTRDGSVWSWGNNTRGQLGLGD---------NDDRNTPQPVTTISNIKA--IAVGNNYSI 760

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHA-----RRPSLISKLPYSEEVVCGGYHTCVLTSG 306
            I E G V+ +G     ++    G H        P  +  +     +  G  H+  LT  
Sbjct: 761 AISEEGLVWAWGYNCSGQLGI--GTHGSLADENTPQKVIVISNVVGLSAGSSHSIALTED 818

Query: 307 GELYTWGSNENG 318
           G L+ WG+NE G
Sbjct: 819 GALWAWGNNEAG 830



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 100/348 (28%), Positives = 160/348 (45%), Gaps = 29/348 (8%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKKEVVQISTGYHH 134
            +A GG  +L L   G +++ G N  GQLG+      ++  P ++  L     +I+ G +H
Sbjct: 986  VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP-AAKIAAGDNH 1044

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            + A+  DG ++ WG NS+GQLGLG          P K+  +S +     A G   S+AV 
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNV--AAIACGGSHSLAVA 1102

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G + SWG    G+LG G          + S+ TP+ +  +  V     AAG  +S  +
Sbjct: 1103 RDGSLWSWGYNYYGQLGLGD---------NYSKTTPQKVNAISNVAA--IAAGEYYSLAL 1151

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
              +G V+ +GD +  ++   +      P  +  L     +  G  H+  LT  G +++WG
Sbjct: 1152 TRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNVAAIAAGEDHSLALTRDGSVWSWG 1211

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
             N  G LG+   D  ++P+ V    + S +  ++ G  H+ AISE + L W WG ++   
Sbjct: 1212 RNSRGQLGLDDNDDRNTPQPVT---TISNIKAIAAGNSHSFAISE-EGLAWAWGYNYD-- 1265

Query: 374  SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             + G  + G L + N      P  V    NV  L  S G  H+ AL E
Sbjct: 1266 GQLGIGTSGSLANENT-----PQKVKVISNVVGL--SGGNYHSLALTE 1306



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 86/289 (29%), Positives = 136/289 (47%), Gaps = 23/289 (7%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L L   G V+  G ND+ QLG+ ++I   L P + + +   +V ++ G   S A+  D
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDIN-RLAPEQ-APVVSNIVSVAAGRLFSLALASD 135

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G L+ WG N  GQLG+G    ++   P+K   LS +     A G   ++A T  G+V  W
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRL--TPSKTPGLSDV--AAIAGGDYHALAATQSGEV--W 189

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
                GR  HGQ    LGF   T ++    ++      VK  AAG   S  +  +G V+ 
Sbjct: 190 AM---GRNDHGQ----LGF---TGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWA 239

Query: 262 FGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
           +G+    ++     G     P+ I+ L     +  G  H   L   G ++ WG+N +G L
Sbjct: 240 WGNNESAQLGTGIAGEAVATPAPIAVLSNITAIAAGRRHAMALAEDGSVWAWGANGSGQL 299

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
           G G  +   +P RV    S + V  ++ GW H+ A++   +L W WG +
Sbjct: 300 GFGDFETPKAPGRVS---SLADVTAIASGWFHSLALTSDGVL-WAWGNN 344



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 101/352 (28%), Positives = 156/352 (44%), Gaps = 37/352 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYH 133
           +A GG  +L L   G V++ G N  GQLG+   EN      P  +  L      I+ G  
Sbjct: 497 VAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDV-FTPTNVDALPL-AASIAAGGG 554

Query: 134 HSSAITVDGELYMWGKNS-NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           H+ A+  DG ++ WG+NS                 P K+  +S +     A G   S+A+
Sbjct: 555 HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINAISNV--AAIACGGSHSLAL 612

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G   SWG    G+LG G          + S+ TPR +  L  V     AAG  HS  
Sbjct: 613 ARDGSFWSWGYNYYGQLGLGD---------NVSKTTPRKVNALSNVVA--MAAGDRHSLA 661

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G ++ +GD    ++   + +H   P  ++ +     +  G  H+  LT  G +++W
Sbjct: 662 LTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNAISNVVAIAAGYRHSLALTRDGSVWSW 721

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
           G+N  G LG+G  D  ++P+ V    + S +  ++ G  ++ AISE + L W W      
Sbjct: 722 GNNTRGQLGLGDNDDRNTPQPVT---TISNIKAIAVGNNYSIAISE-EGLVWAW------ 771

Query: 373 FSEDGHSSGGQLG---HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               G++  GQLG   HG+  D   P  V    NV  L  S G +H+ AL E
Sbjct: 772 ----GYNCSGQLGIGTHGSLADENTPQKVIVISNVVGL--SAGSSHSIALTE 817



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 93/344 (27%), Positives = 154/344 (44%), Gaps = 43/344 (12%)

Query: 83  TLFLTETGCVYAT-----GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
           T+FL   G  +A      G+ D  Q G  +N  +  EP   +G       +++   HS A
Sbjct: 25  TIFLIAPGAAFAADSDGDGVED-AQDGCPDNF-FKSEP-GFTGCGNAEPMVASRLDHSLA 81

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           +  DG +++WG+N   QLGLG    ++   P +   +S I +  A   F  S+A+   G 
Sbjct: 82  LKGDGTVWVWGRNDYNQLGLGDDINRL--APEQAPVVSNIVSVAAGRLF--SLALASDGS 137

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           + +WG    G+LG G   +     R T   TP L        V   A G  H+    ++G
Sbjct: 138 LWAWGGNYYGQLGMGDNDN-----RLTPSKTPGL------SDVAAIAGGDYHALAATQSG 186

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            V+  G     ++ F  G+HA  P  ++ L   + V  G + +  L + G ++ WG+NE+
Sbjct: 187 EVWAMGRNDHGQLGFT-GDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNES 245

Query: 318 GCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
             LG G + + + +P  +      S +  ++ G +H  A++E G +  WG  GS      
Sbjct: 246 AQLGTGIAGEAVATPAPIA---VLSNITAIAAGRRHAMALAEDGSVWAWGANGS------ 296

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 GQLG G+      P  V+   +V A  ++ G+ H+ AL
Sbjct: 297 ------GQLGFGDFETPKAPGRVSSLADVTA--IASGWFHSLAL 332



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 13/168 (7%)

Query: 242  IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR--RPSLISKLPYSEEVVCGGYH 299
            + AAG   S  +  +G ++ +GD    ++    G       P+ +  LP + ++  G  H
Sbjct: 985  MVAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPPAAKIAAGDNH 1044

Query: 300  TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
               L   G +++WG N +G LG+GS     +  R Q   + S V  ++CG  H+ A++  
Sbjct: 1045 ALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINAISNVAAIACGGSHSLAVARD 1104

Query: 360  KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
              L W W          G++  GQLG G++     P  VN   NV A+
Sbjct: 1105 GSL-WSW----------GYNYYGQLGLGDNYSKTTPQKVNAISNVAAI 1141


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 182/391 (46%), Gaps = 39/391 (9%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 4382 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4439

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      +    +E L+   +KK  V +++G  H  A++ DGE++ WG+  +G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4497

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG    
Sbjct: 4498 HGNRDS--YDRPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGD--- 4552

Query: 217  ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+    
Sbjct: 4553 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4606

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P+
Sbjct: 4607 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4666

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +V        +  ++ G  H  A S+G ++ TWG             +  GQLG G    
Sbjct: 4667 KVAA-LQGKKIISIATGSLHCVACSDGGEVFTWG------------DNDEGQLGDGTVSA 4713

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
               P +V   +    ++V CG  HT AL  Y
Sbjct: 4714 IQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4744



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 184/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 3245 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3301

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 3302 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3360

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3361 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3416

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L   +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3417 -------NCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3469

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3470 GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKP 3529

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              +QG      V  V+ G  H  A+++ G++  WG         ++ H   GQ G GN +
Sbjct: 3530 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNTI 3576

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P++V   + +   +V+CG +H+ A
Sbjct: 3577 VNKKPSLVLGLDGIFVNRVACGSSHSVA 3604



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 161/346 (46%), Gaps = 57/346 (16%)

Query: 96   GLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
            GLND  QLG             ++   L+P+ I+G  K +  +S           DG+LY
Sbjct: 3247 GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------DGKLY 3296

Query: 146  MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGA 203
              G+ +NG+LGLG      +P P +V  LS    K+ A+  G + ++A+T  GKV SWG 
Sbjct: 3297 ACGEGTNGRLGLGHN--NNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3354

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  G+LGHG         R T E  P+LI+ L   +++  A G  HSA I  +G +Y +G
Sbjct: 3355 GEDGKLGHGN--------RLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3405

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGC 319
                 ++   +     +P L++ L      +V CG     T  LT  G +++WG  + G 
Sbjct: 3406 LGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGK 3465

Query: 320  LGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
            LG G  +   + H  ER+ G      V Q+ CG + + A+++ G++ TWG G  +     
Sbjct: 3466 LGRGGSEGCSIPHQVERLNG----VGVMQIECGAQFSLALTKSGEVWTWGKGDYY----- 3516

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3517 -------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3555



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 114/247 (46%), Gaps = 16/247 (6%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H L LT TG V++ G  + G+LG  +     + P RI  L +++V  +  G  
Sbjct: 634 AAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDI-PTRIVALAERQVTGVFCGSS 692

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT  GELY WG+ + G+LG G    K   +PT V+ L        ALG     S+ 
Sbjct: 693 YSAAITAAGELYTWGRGTYGRLGHGNSEDK--HLPTIVQVLKQQRVIHVALGCGDAHSLC 750

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G V +WG G  G+LG+G  +       S+      L +  +G     + + F  S 
Sbjct: 751 VTDTGIVYAWGDGDFGKLGNGTCNG------SSVPVAIELPQCSDGAVKVFSGSHF--SV 802

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G VY +G     ++      H   P  I  L      ++  G  H   LT+ GEL
Sbjct: 803 ALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGEL 862

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 863 YGWGRND 869



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 31/287 (10%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            +  ++ +WG N   QLG G K +KV  +PT    LS +     A G +    V+  GK+ 
Sbjct: 3239 LSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3296

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
            + G G +GRLG G  +++          TP+ +  L    VK  A  +G  H+  +  +G
Sbjct: 3297 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3347

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +V+ +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  
Sbjct: 3348 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3407

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGT 372
            E G LG G       P+ V    ++  V QV+CG +    +    EG + +WG     G 
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTA-LADHRVVQVACGSRDAQTLCLTEEGLVFSWG----DGD 3462

Query: 373  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            F        G+LG G       P  V     V  +Q+ CG   + AL
Sbjct: 3463 F--------GKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLAL 3501



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 115/270 (42%), Gaps = 73/270 (27%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            ++ WG N  GQLG G   ++ I +PT  E LS +   Q A G +   AVT  GK+ + G 
Sbjct: 4379 IFGWGHNHRGQLG-GLDGSR-IKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGY 4436

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  GRLG G   S+          TP L++ L+ V +K  A                   
Sbjct: 4437 GAGGRLGIGGTDSV---------TTPTLVESLQHVMIKKVA------------------- 4468

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                                         V  GG H   L+S GE+++WG  E+G LG G
Sbjct: 4469 -----------------------------VNSGGKHCLALSSDGEVFSWGEGEDGKLGHG 4499

Query: 324  SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 382
            + D    P+ ++   S   V  ++CG  H+A I S+G +LTWG G              G
Sbjct: 4500 NRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLTWGKG------------RYG 4546

Query: 383  QLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            +LGHG+  D + P +V      +A+ ++CG
Sbjct: 4547 RLGHGDSEDQLQPKLVEALLGYRAIDIACG 4576



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 20/227 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG+ GRLG G   S+  P    A  +  +  + CG +++  +T  G +Y  G   +G+
Sbjct: 654 WGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGR 713

Query: 103 LGISENIGYSLEPLRISGLKKEV---VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   +    L P  +  LK++    V +  G  HS  +T  G +Y WG    G+LG G 
Sbjct: 714 LGHGNSEDKHL-PTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGT 772

Query: 160 KAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +P+  ++ +C  G     +   F  SVA+   G V SWG                
Sbjct: 773 CNGSSVPVAIELPQCSDGAVKVFSGSHF--SVALGRDGTVYSWGK-----------GHGG 819

Query: 219 GFLRSTSEYT--PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 SE+T  P+ I+ LEG  +   A G  H   +  +G +Y +G
Sbjct: 820 RLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWG 866



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 18/205 (8%)

Query: 168 PTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P  +E L  +   Q A   E    +A+T  G V SWG G  GRLGHG  SS         
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSS--------- 669

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
           +  P  I  L   +V     G  +SA I   G +Y +G     ++          P+++ 
Sbjct: 670 KDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQ 729

Query: 286 KLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            L   + V+     CG  H+  +T  G +Y WG  + G LG G+ +    P  ++ P   
Sbjct: 730 VL-KQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCS 788

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTW 364
               +V  G   + A+  +G + +W
Sbjct: 789 DGAVKVFSGSHFSVALGRDGTVYSW 813



 Score = 45.4 bits (106), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 83/197 (42%), Gaps = 21/197 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAH-TLFLTETGCVYA--TGLND 99
           WG+GD+G+LG G+      PV     +          G+H ++ L   G VY+   G   
Sbjct: 760 WGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGG 819

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
               G SE   ++  P  I  L+ K +V ++ G  H  A+T  GELY WG+N   Q  L 
Sbjct: 820 RLGHGHSE---HTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQ--LC 874

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  PI      L  I T    L      A  GG + + W    S  LG   +   +
Sbjct: 875 PPCVTRDPI-----VLLPILTTPPTLRIAGMAA--GGAQSIVW--CHSSTLGIPVK---I 922

Query: 219 GFLRSTSEYTPRLIKEL 235
            F+   SE+T RL+ +L
Sbjct: 923 PFVVDLSEHTFRLLDQL 939



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 23/204 (11%)

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           +E  +G+  +Q A        +T  G+VLS        L H           +     P+
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLS--------LQHSN-------CHTPDTTAPK 620

Query: 231 LIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
            I+ LE V +   AA     H   +   G V+ +G+    ++   + +    P+ I  L 
Sbjct: 621 PIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALA 680

Query: 289 YSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
             +   V CG  ++  +T+ GELYTWG    G LG G+ +  H P  VQ    +  V  V
Sbjct: 681 ERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQV-LKQQRVIHV 739

Query: 347 S--CGWKHTAAISE-GKILTWGWG 367
           +  CG  H+  +++ G +  WG G
Sbjct: 740 ALGCGDAHSLCVTDTGIVYAWGDG 763


>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
          Length = 385

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 145/312 (46%), Gaps = 44/312 (14%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            ++ +GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGALLEYV 423
           G  HT   L YV
Sbjct: 295 GSYHT---LAYV 303



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 110/238 (46%), Gaps = 20/238 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG    D
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPSD 318



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++  + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLNDIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/271 (31%), Positives = 136/271 (50%), Gaps = 17/271 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG  +
Sbjct: 57  GCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGT 116

Query: 107 ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
            N G+    +  + + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  P
Sbjct: 117 TNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ--P 174

Query: 167 IPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 175 IPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SGN 225

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS--L 283
           + TP  I  L+G++V+  A G+ H+  + + G++Y +G  +  ++     ++   P+  +
Sbjct: 226 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVV 285

Query: 284 ISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           + K    E   C   HT    T  G++Y WG
Sbjct: 286 VDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ TE   V+  G+N  G LG  + +  ++E
Sbjct: 11  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYATENDEVFVLGMNCSGCLGTGD-MQSTIE 69

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G      +P      
Sbjct: 70  PRRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTN 129

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 130 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 179

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 K+ +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 180 TSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 239

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 240 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACH 298

Query: 350 WKHTAA--ISEGKILTWG 365
             HT+A     G++  WG
Sbjct: 299 SAHTSAAKTQSGQVYMWG 316



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 107/234 (45%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   +V   G   SG LG G        ++ST E  PR +  L G K+   + G   H  
Sbjct: 43  TENDEVFVLGMNCSGCLGTGD-------MQSTIE--PRRLDSLCGKKIACLSYGSGPHVV 93

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
              E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS GE
Sbjct: 94  LATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGE 153

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           +YTWG N +G +G GS      P RV        V  ++CG   + A+ E G++  WG+ 
Sbjct: 154 VYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYN 213

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  +   + ++  +V+CG+ HT  L +
Sbjct: 214 GN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTD 255



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T  
Sbjct: 43  TENDEVFVLGMNCSGCLGTGDMQSTIEP--RRLDSLCG--KKIACLSYGSGPHVVLATEE 98

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +   GF+    + +  L+ +    KV   A G  HS  +  
Sbjct: 99  GEVYTWGHNAYSQLGNGTTNH--GFV--PCQVSTNLVNK----KVIEVACGSHHSMVLTS 150

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 151 DGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVW 210

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG+I  WG      
Sbjct: 211 GYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG------ 263

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 264 ------ANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 304



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 268

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  V++I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 269 QLGTGNKSNQSY-PTTVVVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 321

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 322 --SVILPHLTHFACTDDVF 338


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 167/363 (46%), Gaps = 30/363 (8%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT  G VYA G ND 
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDH 69

Query: 101 GQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            QLG   +   +  PL I  L+  V +QIS G  HS A++  G++  WG N  GQLG   
Sbjct: 70  SQLG---HDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHAT 126

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG      +  
Sbjct: 127 D-KEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDL-- 183

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
               T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +  
Sbjct: 184 ----THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRA 239

Query: 280 RPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+   
Sbjct: 240 YPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMVME 298

Query: 338 FSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              S + QV+CG +HT A+  S G++  +G G            S GQLG  +    + P
Sbjct: 299 LMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLMLP 346

Query: 396 TIV 398
            +V
Sbjct: 347 QVV 349



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/299 (31%), Positives = 140/299 (46%), Gaps = 16/299 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+ +LG   L ++ RP++    + + +  ++CG  H+L L++ G V + G ND GQL
Sbjct: 65  GSNDHSQLG-HDLPTK-RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQL 122

Query: 104 GISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG-KKA 161
           G + +      P  +  L  K VVQI+ G +HS A+T  GELY WG N  GQLG+   K 
Sbjct: 123 GHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKD 182

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P ++  L GI     A G   S  ++  G V  WG    G+LG   E       
Sbjct: 183 LTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDE------- 235

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             T+   P  +K L  + V+  A G   S  +   G V+  G  A  ++     ++   P
Sbjct: 236 --TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293

Query: 282 SLISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            ++ +L  S   +V CG  HT  L  S G +Y +G   +G LG  S   L  P+ V GP
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 37/280 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LGH   +             P LI EL+   +   + G  HS  + + G+V  +
Sbjct: 66  SNDHSQLGHDLPTK-----------RPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSW 114

Query: 263 GDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           GD        A DK + Q     R+  L+SK     ++ CG  H+  LTS GELY+WGSN
Sbjct: 115 GDNDCGQLGHATDKEIMQLPKVVRQ--LVSKTVV--QIACGNNHSLALTSCGELYSWGSN 170

Query: 316 ENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGT 372
             G LG+ S  D+ H   P R+       P+  ++CG  H+  IS+   + +GW      
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW------ 222

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
               G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 223 ----GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACG 258



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 23/152 (15%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  E+V CG  HT  LT+ G++Y  GSN++  LG  + +   L 
Sbjct: 24  EDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSNDHSQLGHDLPTKRPLL 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            PE       +  + Q+SCG +H+ A+S+ G++L+WG             +  GQLGH  
Sbjct: 84  IPE-----LQDYVIIQISCGSRHSLALSDWGQVLSWG------------DNDCGQLGHAT 126

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D + +  P +V    +   +Q++CG NH+ AL
Sbjct: 127 DKEIMQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 16/122 (13%)

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAIS-EGK 360
           + SG ELY WGS  +G LG+G I+        Q P++ ++ V+QV+CG +HT  ++  GK
Sbjct: 1   MASGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGK 60

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           +   G          + HS   QLGH  D+    P ++   ++   +Q+SCG  H+ AL 
Sbjct: 61  VYACG---------SNDHS---QLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALS 106

Query: 421 EY 422
           ++
Sbjct: 107 DW 108


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 143/293 (48%), Gaps = 33/293 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYATG ND G
Sbjct: 58  VFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTEERTTFHL--ISFFTPQHKIKQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLP 175

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                 +P     +  +G      + G+  S  VT  G++  +G   +G+LG       L
Sbjct: 176 DMPNACVP----HQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPENGKLG-------L 224

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI----FGDRAVDKMLFQE 274
            +   ++   P+L+ E+    +++A  G  HS  + EN         FG   +   LF+ 
Sbjct: 225 PYELLSNHRIPQLVPEIPEKVIQVACGG-EHSVVLTENDLYTFGLGKFGQLGLGTFLFE- 282

Query: 275 GNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                 P ++      K+ Y   + CG  H  +LT  G +YT+G   +G LG+
Sbjct: 283 ---TSEPRVVESIKGRKISY---ISCGENHAALLTDTGLMYTFGDGRHGKLGL 329



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 148/300 (49%), Gaps = 27/300 (9%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            V +S G  HS+ +T + +LY++G N+ GQLGLG K+A  +  PT V+ L     K AA 
Sbjct: 37  AVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSA--VSKPTCVKALKPEKVKLAAC 94

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++  T GG V + G    G+LG G       F    S +TP+        K+K  +
Sbjct: 95  GRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTF-HLISFFTPQH-------KIKQLS 146

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           AG   SA + E+GR++++GD +  ++   +  +A  P  ++       + CG YH+  +T
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVT 206

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKIL 362
           + GELY +G  ENG LG+     L S  R+     E P  V QV+CG +H+  ++E  + 
Sbjct: 207 TDGELYIFGEPENGKLGLPY--ELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTENDLY 264

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           T+G G              GQLG G  + +   P +V   +  K   +SCG NH   L +
Sbjct: 265 TFGLG------------KFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTD 312



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 28/307 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N  GQLGLG    +     T    +S  FT     KQ + G   S
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHLIS-FFTPQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G     +     + T+           G  V   + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTT-----------GKPVSWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKM--LFQEGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           SA +  +G +YIFG+    K+   ++  ++ R P L+ ++P    +V CGG H+ VLT  
Sbjct: 202 SAFVTTDGELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLTEN 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
            +LYT+G  + G LG+G+     S  RV        +  +SCG  H A +++  ++    
Sbjct: 262 -DLYTFGLGKFGQLGLGTFLFETSEPRVVESIKGRKISYISCGENHAALLTDTGLMYTFG 320

Query: 367 GGSHGTF 373
            G HG  
Sbjct: 321 DGRHGKL 327


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 151/310 (48%), Gaps = 44/310 (14%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
           + IS G  HS  +T+DG+L++WGK   G+LG G++ +  +P       L+ +F + +   
Sbjct: 104 IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 156

Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            ALG   SVA+T  G V +WG GG G LGH            T E  PR +      K+ 
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVY---------TRELVPRCVDGSWDCKIS 207

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------QEGNHARRPSLISKLPYS-EEV 293
             A    H+A I E+G +Y++G    D  L         EG     PS +  L      V
Sbjct: 208 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 267

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKH 352
            CGG+ T  LT  G+L+ WG+N N  LG G  D L   E +  P  +S  + Q++CG  H
Sbjct: 268 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPLPVPSLDSVRITQIACGGYH 325

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           + A++ EGK+L+WG GG             GQLG+ +  +   PT +    + K + ++C
Sbjct: 326 SLALTKEGKVLSWGHGGH------------GQLGNSSLRNQKIPTEIEALADKKIVFIAC 373

Query: 412 GFNHTGALLE 421
           G + + A+ +
Sbjct: 374 GGSSSAAITD 383



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P  + G    ++  I+T   H++AIT  GELYMWG+           
Sbjct: 183 ALG-HKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  L+ V++   A G  HS  + + G+V  +G     ++     
Sbjct: 299 -------NLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSL 351

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V   CGG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 352 RNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411

Query: 333 RVQ 335
            V 
Sbjct: 412 EVN 414



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G +G+LG  SL ++  P    A     +  +ACGG+ +  +T+ G ++  G     Q
Sbjct: 338 WGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQ 397

Query: 103 LGISENIGYSLEPLRISGLKKE-------VVQISTGYHHS 135
           LG+         P+ ++ L +E       V+ +S G  H+
Sbjct: 398 LGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASHA 437


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G      V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 246

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 247 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 293

Query: 417 GALLEYV 423
             L E V
Sbjct: 294 VVLTEKV 300



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++       V   +CG  
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRN 135

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQV 409
           HT       +++   GG +      G ++ GQLG G  +D D  H  IV F       Q+
Sbjct: 136 HT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTPADTIKQL 183

Query: 410 SCGFNHTGALLE 421
           S G N + AL E
Sbjct: 184 SAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 164/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +         IK+L        +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVFFTPADTIKQL--------SAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G      V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLG----KKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 -VVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 31/245 (12%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
            G  H+    + G VY  G     ++ L    +      ++   P    +++  G   + 
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSA 191

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +G+
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGE 248

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGA 418
           + T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT  
Sbjct: 249 LYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVV 295

Query: 419 LLEYV 423
           L E V
Sbjct: 296 LTEKV 300



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 34/201 (16%)

Query: 230 RLIKELEGVKVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           R+   +   + +I  AGF      + + + G V+ FG     K  F E       ++ SK
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSK 67

Query: 287 LPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
             +  ++     CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E  
Sbjct: 68  FWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK- 126

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNF 400
           V   +CG  HT       +++   GG +      G ++ GQLG G  +D D  H  IV F
Sbjct: 127 VKLAACGRNHT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFF 174

Query: 401 GENVKALQVSCGFNHTGALLE 421
                  Q+S G N + AL E
Sbjct: 175 TPADTIKQLSAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
 gi|194706180|gb|ACF87174.1| unknown [Zea mays]
          Length = 391

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 182/395 (46%), Gaps = 34/395 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E +       A   +++ A+  G  ++L + E G ++  G N  G 
Sbjct: 13  WGSGEDGQLGMGGNEEKDWAHCVEALGSYAVTAVVAGSRNSLAICEDGRLFTWGWNQRGT 72

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L   ++VQ + G  H  A+  +G  Y WG N  GQ G     
Sbjct: 73  LGHPPKTKTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEYGQCGEEPER 132

Query: 158 ---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G +A +   IPT   C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 133 KEDGTRALRR-DIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWG-----------Q 180

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---L 271
               G ++  S  TP  ++ LE  KV++ A G  H+  + E+G ++ +G+    ++    
Sbjct: 181 PWPPGDIKQIS--TPVRVQGLE--KVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGD 236

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
            Q  +H  R   +S L    ++  GG+H+  LT  GE+Y WG  E+G LG G        
Sbjct: 237 TQPRSHPIRVEGLSDLSLV-DIAAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMV 295

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P +V+    E  V QVSCG  H+ A++ +G++ ++G  G HG        + GQ   G D
Sbjct: 296 PLKVELLAGEDIV-QVSCGGTHSVALTRDGRMFSYG-RGDHGRLGYGRKLTTGQP-MGVD 352

Query: 390 VDYIHP-TIVNFGENVKALQVSCGFNHTGALLEYV 423
           +D   P T  +     +A  V+CG  HT A++ + 
Sbjct: 353 IDLPPPKTRSSRDGQWQAKYVACGGRHTLAIVVWA 387



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 141/334 (42%), Gaps = 27/334 (8%)

Query: 91  CVYATGLNDFGQLGI----SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
            V A G  + GQLG+     ++  + +E L        V  +  G  +S AI  DG L+ 
Sbjct: 9   AVLAWGSGEDGQLGMGGNEEKDWAHCVEALG----SYAVTAVVAGSRNSLAICEDGRLFT 64

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG N  G LG   K  K    P  V  L+G+   QAA+G    +AV   G   +WG    
Sbjct: 65  WGWNQRGTLGHPPKT-KTESSPGPVHALAGLKIVQAAIGGWHCLAVDDNGHAYAWGGNEY 123

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+ G   E    G  R+     P   +    +KV+  AAG  HS  + + G V+ +G   
Sbjct: 124 GQCGEEPERKEDG-TRALRRDIPTPQRCAPKLKVRQVAAGGTHSVVLTQEGHVWTWGQPW 182

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               + Q       P  +  L     +  G +H   LT  G L+ WG+NE G LG G   
Sbjct: 183 PPGDIKQ----ISTPVRVQGLEKVRVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQ 238

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
               P RV+G    S VD  + GW  TA   +G++  WG  G H           G+LG 
Sbjct: 239 PRSHPIRVEGLSDLSLVDIAAGGWHSTALTIQGEVYAWG-RGEH-----------GRLGF 286

Query: 387 GND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G+D    + P  V        +QVSCG  H+ AL
Sbjct: 287 GDDKSSRMVPLKVELLAGEDIVQVSCGGTHSVAL 320


>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
          Length = 245

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V +S G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G E     
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQ--- 176

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                 + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N
Sbjct: 177 -----KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 19/244 (7%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P K +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   + G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG--GSHGTFSED 376
           G+G       SP+ ++      P  QV+ G  H+  ++  G I  WG    G  G   E+
Sbjct: 170 GLGIECQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228

Query: 377 GHSS 380
           G  S
Sbjct: 229 GRFS 232



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 161 WGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 102 QLGIS-ENIGYSLE 114
           QLG++ EN  +SLE
Sbjct: 221 QLGLNDENGRFSLE 234


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 160/326 (49%), Gaps = 22/326 (6%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   V S F   +  + ++ CG  H+  + +TG ++  G ND+GQLG+      S +P
Sbjct: 21  SRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHIS-KP 79

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   T   +++  G +  GQLG G  A   +   P+    
Sbjct: 80  SCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYD 139

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             LSG    Q A G   S+A+T  G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 140 SGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVN--KPTKVHIPEP 197

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +K++        +AG+ HS  + E+G VY+ G+    K+        +      +LP   
Sbjct: 198 VKQI--------SAGYYHSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPSPA 249

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQVSC 348
             V CGG+HT +L   G LY  GSN +G LG+G+ +  LH P+ + +G      + ++SC
Sbjct: 250 VHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETITRISC 309

Query: 349 GWKHTAAISE-GKILTWGWGGSHGTF 373
           G  HTA ++E GK+ T G  G HG  
Sbjct: 310 GESHTAVVTESGKLYTCG-DGRHGKL 334



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 180/367 (49%), Gaps = 32/367 (8%)

Query: 2   LGRSLTA---MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES 58
           +GRS  A    + +++++D  L    G     +     R F  ++G+ D+G+LGLG    
Sbjct: 18  IGRSRFADNVASHFFIRRDPVLSITCGDEHSAVICQTGRLF--VFGSNDWGQLGLGHKNH 75

Query: 59  RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL--GISENIGYSLE-P 115
             +P    A +   +  +ACG AHTL  T +  ++A G +  GQL  GIS  IG S+  P
Sbjct: 76  ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQEGQLGRGISA-IGDSVNTP 134

Query: 116 LRI--SGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           + +  SGL   ++VQI+ G HHS A+T DG ++ WG N  GQLGL    + ++  PTKV 
Sbjct: 135 VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGL-PDVSGLVNKPTKVH 193

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
               +  KQ + G+  S  +T  G V   G   SG+LG         F   +++  P+ +
Sbjct: 194 IPEPV--KQISAGYYHSTFLTESGLVYVCGESESGKLGID-----ASF---STQVAPKQM 243

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE 291
            +L    V +A  G  H+  + ENG +Y  G  +  ++ L    +    P L+ +     
Sbjct: 244 -QLPSPAVHVACGGH-HTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRN 301

Query: 292 EVV----CGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPERVQGPFSESPVDQV 346
           E +    CG  HT V+T  G+LYT G   +G LG+  + + +H    VQ  + E  V  V
Sbjct: 302 ETITRISCGESHTAVVTESGKLYTCGDGRHGKLGLEENENNVHELTFVQR-YKELFVSDV 360

Query: 347 SCGWKHT 353
           +CG  HT
Sbjct: 361 ACGGCHT 367



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 39/343 (11%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + ETG V+  G + F    ++ +     +P         V+ I+ G  HS+ I   G L+
Sbjct: 9   IPETGAVFTIGRSRFAD-NVASHFFIRRDP---------VLSITCGDEHSAVICQTGRLF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           ++G N  GQLGLG K    I  P+ V+ L        A G   ++  TG  K+ + G+  
Sbjct: 59  VFGSNDWGQLGLGHKNH--ISKPSCVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQ 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G+LG G   S +G     S  TP L+ +  L G K+   AAG  HS  +  +G V+ +G
Sbjct: 117 EGQLGRG--ISAIG----DSVNTPVLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWG 170

Query: 264 DRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                ++ L        +P+ +      +++  G YH+  LT  G +Y  G +E+G LGI
Sbjct: 171 SNLEGQLGLPDVSGLVNKPTKVHIPEPVKQISAGYYHSTFLTESGLVYVCGESESGKLGI 230

Query: 323 -GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
             S     +P+++Q P   SP   V+CG  HT  ++E           +G     G +S 
Sbjct: 231 DASFSTQVAPKQMQLP---SPAVHVACGGHHTVILAE-----------NGNLYCTGSNSS 276

Query: 382 GQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFNHTGALLE 421
           GQLG G ++  +H P ++  G   N    ++SCG +HT  + E
Sbjct: 277 GQLGLGTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTE 319


>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
          Length = 395

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 183/399 (45%), Gaps = 40/399 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G+ E +       A    ++ ++  G  ++L + E G ++  G N  G 
Sbjct: 11  WGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGT 70

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 71  LGHPPETKTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPER 130

Query: 157 ---LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
               G+   + I IP +  C S +  +Q A G   SV +T  G V +WG           
Sbjct: 131 KDDTGRPLRRDITIPQR--CASKLSVRQVAAGGTHSVVLTREGHVWTWG----------- 177

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE  KV++ A G  H+  + E+G ++ +G+    ++   
Sbjct: 178 QPWPPGDIKQIS--TPVRVQGLE--KVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTG 233

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  G +Y WG  E+G LG G        
Sbjct: 234 DTQPRSQPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMV 293

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++VQ    E+ V Q+SCG  H+ A++ +G++ ++G  G HG     G+      GH  +
Sbjct: 294 PQKVQLLVEENIV-QISCGGTHSVALTRDGRMFSFG-RGDHGRL---GYGRKVTTGHPME 348

Query: 390 VDYIHPTIVNF-----GENVKALQVSCGFNHTGALLEYV 423
           V    P   N      G +  +  V+CG  HT A++E++
Sbjct: 349 VPINLPPATNLSGSGAGGHWCSKLVACGGRHTLAIVEWL 387



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 136/331 (41%), Gaps = 23/331 (6%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           + + G  + GQLGI  N          +   + V  +  G  +S AI  DG+L+ WG N 
Sbjct: 8   IISWGSGEDGQLGIGNNEEKEWVCAVKALAAQNVCSVVAGSRNSLAICEDGKLFTWGWNQ 67

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            G LG   +  K   IP++V+ L+     QAA+G    +AV   G+  +WG    G+ G 
Sbjct: 68  RGTLGHPPET-KTENIPSQVKALANAKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 126

Query: 212 GQE--SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
             E        LR       R   +L    V+  AAG  HS  +   G V+ +G      
Sbjct: 127 EPERKDDTGRPLRRDITIPQRCASKL---SVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 183

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
            + Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G      
Sbjct: 184 DIKQ----ISTPVRVQGLEKVRLIAVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRS 239

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
            P  VQG    + VD  + GW  TA   +G +  WG  G H           G+LG G+D
Sbjct: 240 QPIAVQGLSDLTLVDIAAGGWHSTALTDDGGVYGWG-RGEH-----------GRLGFGDD 287

Query: 390 -VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               + P  V        +Q+SCG  H+ AL
Sbjct: 288 KSSKMVPQKVQLLVEENIVQISCGGTHSVAL 318


>gi|293344078|ref|XP_001080802.2| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Rattus norvegicus]
 gi|293355949|ref|XP_344892.4| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Rattus norvegicus]
 gi|149055831|gb|EDM07262.1| similar to Gnefr protein (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 450

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 179/417 (42%), Gaps = 72/417 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E    P   S F K   +K++  GG H++ +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G    WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTDTGSTFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE   V  A AG  HSA + + G +Y++G           
Sbjct: 194 LPL--FLTAKE---PSRVTGLESSTVVCAVAGSDHSASLTDTGELYVWG----------R 238

Query: 275 GNHARRPSLISKLPYSEEVVC-------------GGYHTCVLTSGGELYTWGSNENGCLG 321
             H +  SL + LP  + V               G  H    T  G+++TWG  + G LG
Sbjct: 239 NKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298

Query: 322 I----------GSIDVLHSPERVQGPFSESPVD------QVSCGWKHTAAISEGKILTWG 365
                      G  D   + +R+Q     SP+       +VSCG +H  A+   K  +WG
Sbjct: 299 RTLGSPEAQKHGEQDSSLAFQRLQNSVP-SPLHCLTGAAEVSCGSEHNLAVIRDKCCSWG 357

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGENVKALQVSCGFNHTGALLE 421
           W            +  G  G G + +   PT V       + L V CG  H+ AL +
Sbjct: 358 W------------NEHGMCGDGTESNVWTPTPVQALPSPSRLLLVGCGAGHSLALCQ 402



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 143/292 (48%), Gaps = 36/292 (12%)

Query: 92  VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMW 147
           ++A G N +GQLG+   E++   L P ++S   K   +  ++ G  HS  +T  G L++ 
Sbjct: 17  LFAWGANSYGQLGLGHKEDV---LLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVC 73

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G
Sbjct: 74  GLNKDGQLGLG-HTEEVLRF-TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFG 131

Query: 208 RLG--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD- 264
           +LG  HG    ++          P+ I+ L   KV   AAG  H+    + G  + +G  
Sbjct: 132 QLGVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTDTGSTFQWGTG 180

Query: 265 -RAVDKMLFQEGN-----HARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSN 315
             +  + L    N      A+ PS ++ L  S  VVC   G  H+  LT  GELY WG N
Sbjct: 181 LASSGRRLCPGQNLPLFLTAKEPSRVTGL-ESSTVVCAVAGSDHSASLTDTGELYVWGRN 239

Query: 316 ENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
           ++G L       L  P+RV+   F +  V  V  GW H  A +E GK+ TWG
Sbjct: 240 KHGQLA-SLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290


>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 570

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 151/381 (39%), Gaps = 28/381 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+      P+  S        A+  G  H+L LT  G V A G ND GQ
Sbjct: 62  WGDNAFGQLGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRNDSGQ 121

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +  S   +    +   V  ++ G+ HS A+T  G +  WG NS GQLG G   +
Sbjct: 122 LGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTGVVLAWGSNSFGQLGDGTTVS 181

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  ++    G+     A G   S+A+T  G  L+WG   SG+LG G          
Sbjct: 182 SSTPVAVRLPV--GVTVTAVAAGSGHSLALTSVGAALAWGNNFSGQLGDGT--------- 230

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S  TP  ++   G  V   A G  HS  +   G    +G       L      +    
Sbjct: 231 TVSSSTPVAVRLPVGTTVTAVAGGSHHSLALTSAGAALAWGGN-FSGQLGDGTTVSSSTP 289

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           ++  LP    V     G  H+  LTS G    WGSN +G LG G+      P  V  P  
Sbjct: 290 VVVSLPVGTTVTALAGGDAHSVALTSAGAALAWGSNGDGQLGDGTNADSSVPIAVSLPAG 349

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            +     +    H  AI S G  L WG  G             GQLG G + D   P  V
Sbjct: 350 ATITAIAAHDGAHNLAITSTGAALAWGGNGD------------GQLGDGTNADSSVPIAV 397

Query: 399 NFGENVKALQVSCGFNHTGAL 419
           +         ++    H+ AL
Sbjct: 398 SLPAGTTITAIAASVEHSLAL 418



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 93/237 (39%), Gaps = 27/237 (11%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E S +  G    L+WG    G+LG G          +T   TP  +    G       AG
Sbjct: 48  EPSPSAVGSDAFLAWGDNAFGQLGDGT---------TTGSNTPLPVSLPAGTDATAVVAG 98

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV--VCGGY-HTCVL 303
             HS  +   G V  +G R     L      +    ++ +LP    V  V  G+ H+  L
Sbjct: 99  DFHSLALTSAGTVLAWG-RNDSGQLGDGTTVSSSTPVVVRLPVGVTVTAVAAGFGHSLAL 157

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
           TS G +  WGSN  G LG G+     +P  V+ P   + V  V+ G  H+ A+ S G  L
Sbjct: 158 TSTGVVLAWGSNSFGQLGDGTTVSSSTPVAVRLPVGVT-VTAVAAGSGHSLALTSVGAAL 216

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            WG       FS       GQLG G  V    P  V          V+ G +H+ AL
Sbjct: 217 AWG-----NNFS-------GQLGDGTTVSSSTPVAVRLPVGTTVTAVAGGSHHSLAL 261


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 157/325 (48%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      +  +IS G  H+  +T +G+LY++G N+ GQLG+  
Sbjct: 19  FGKSKFAENI-----PSKFWLKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGV-- 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +A   I  PT V+ L       AA G   ++  T  GK+ S G    G+LG G  +    
Sbjct: 72  EAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEGQLGLGDTAGRTS 131

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F +  S +T +        K+K  +AG   SA +  +G+++++GD +  ++  ++G    
Sbjct: 132 F-QEISFFTAQY-------KIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYC 183

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI--GSIDVLHSPERVQGP 337
            P  +        + CG YH+  +T  GELYT+G  ENG LG+    I     P+RV G 
Sbjct: 184 TPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGL 243

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 396
             +  V  VSCG +HT A++E ++ T+G G              GQLGHG  +   H P 
Sbjct: 244 SGK--VTMVSCGGEHTIAVTEKEVYTFGLG------------QFGQLGHGTFIFETHIPK 289

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V+     K   V+CG NHT  + E
Sbjct: 290 AVDALTKKKIRYVTCGENHTAIITE 314



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 147/313 (46%), Gaps = 44/313 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  HT+ +T  G +Y  G N++GQLG+      S +P  +  LK E VV  + G HH
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAIS-KPTCVKALKSEKVVLAACGRHH 100

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G+LY  G NS GQLGLG  A +     T  + +S  FT     KQ + G   S
Sbjct: 101 TLVYTEQGKLYSSGGNSEGQLGLGDTAGR-----TSFQEIS-FFTAQYKIKQLSAGSNMS 154

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G+         LG  + T   TP+ +    G  +   + G+ H
Sbjct: 155 AALTVDGKLFMWGDNSEGQ---------LGLEKGTIYCTPQKVD--TGKPIAWISCGYYH 203

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV----------CGGYH 299
           SA + ++G +Y FG+        + G     P  I K    + V+          CGG H
Sbjct: 204 SAFVTQDGELYTFGEP-------ENGKLGLPPDKIKKHKKPQRVLGLSGKVTMVSCGGEH 256

Query: 300 TCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           T  +T   E+YT+G  + G LG G+ I   H P+ V    ++  +  V+CG  HTA I+E
Sbjct: 257 TIAVTE-KEVYTFGLGQFGQLGHGTFIFETHIPKAVDA-LTKKKIRYVTCGENHTAIITE 314

Query: 359 GKILTWGWGGSHG 371
             +L     G HG
Sbjct: 315 KGLLYTFGDGRHG 327



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 47/301 (15%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LG+ +  +  +P    A +   +   ACG  HTL  TE G +Y++G N  G
Sbjct: 60  VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +  G  S + +     + ++ Q+S G + S+A+TVDG+L+MWG NS GQLGL K 
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEK- 178

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +   P KV+  +G      + G+  S  VT  G++ ++G   +G+LG       L  
Sbjct: 179 -GTIYCTPQKVD--TGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLG-------LPP 228

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG----------------- 263
            +      P+ +  L G KV + + G  H+  + E   VY FG                 
Sbjct: 229 DKIKKHKKPQRVLGLSG-KVTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETH 286

Query: 264 -DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             +AVD +  +            K+ Y   V CG  HT ++T  G LYT+G   +G LG+
Sbjct: 287 IPKAVDALTKK------------KIRY---VTCGENHTAIITEKGLLYTFGDGRHGKLGL 331

Query: 323 G 323
           G
Sbjct: 332 G 332



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P++CS F K +++++ACGG H L  
Sbjct: 321 FGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLVF 366


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 33/313 (10%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGEL 144
           E   V+A G N  GQLG       S  P R++      + + ++  GY H+ A+T DG++
Sbjct: 6   ERSLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDV 65

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
             +G    GQLG+G   +   P   +V  LSG    + A G E S+A+T  G + ++G  
Sbjct: 66  LGFGNGVKGQLGIGNTDSHSNP--QRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGDN 123

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
            SG+LG       LG   +  E TP+ +  L   K+   A G  H+A +  +G +++FG+
Sbjct: 124 LSGQLG-------LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGN 176

Query: 265 RAVDKMLFQEGNHARRPSLISKLP---------YSEEVVCGGYHTCVLTSGGELYTWGSN 315
              D  L   G+    P +++  P         +  ++ CG  HT  LT+ G +Y WG N
Sbjct: 177 NR-DGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
             G LG G     ++P  V  P S      V+CG +HT A+++   + +G+G        
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDV-YGFG-------S 287

Query: 376 DGHSSGGQLGHGN 388
           D H   GQLG G 
Sbjct: 288 DRH---GQLGLGR 297



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 145/314 (46%), Gaps = 24/314 (7%)

Query: 36  QRRFAALW--GNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALA---CGGAHTLFLTET 89
           +R  + +W  G    G+LG G+  +S + P    AF+    + +A   CG  HT  LT  
Sbjct: 4   RRERSLVWAVGGNSKGQLGNGTPTQSSFLPCRV-AFQLAPTQRIAEVFCGYEHTFALTSD 62

Query: 90  GCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWG 148
           G V   G    GQLGI     +S  P R+  L  K VV+++ G  HS A+T  G+LY +G
Sbjct: 63  GDVLGFGNGVKGQLGIGNTDSHS-NPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFG 121

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N +GQLGLG         P KV  L      Q A G + +  +T  G++  +G    G 
Sbjct: 122 DNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRDGA 181

Query: 209 L---GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           L   GH  E   +          P+L+  L+G  V     G  H+  +   G VY +G+ 
Sbjct: 182 LGVAGHANEGPPI------VASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGEN 235

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
              ++   +  +   PSL+ K P S      V CGG HT  +T   ++Y +GS+ +G LG
Sbjct: 236 GRGQLGTGDTQNRYTPSLVCK-PLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294

Query: 322 IGSIDVL-HSPERV 334
           +G   V+   P R+
Sbjct: 295 LGRRGVIVPVPTRI 308



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 102/229 (44%), Gaps = 17/229 (7%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+   G+LGLG         P       +  +  LACG  HT  LT +G ++  G N  
Sbjct: 120 FGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFMFGNNRD 179

Query: 101 GQLGIS--ENIGYSL---EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G LG++   N G  +    P  ++GLK K VVQI  G  H+ A+T  G +Y WG+N  GQ
Sbjct: 180 GALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGENGRGQ 239

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P     + LS       A G + ++AVT    V  +G+   G+LG G+ 
Sbjct: 240 LGTGDTQNRYTP-SLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLGLGRR 298

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             I+          P  I  L G +VK    G  H+      G  YI G
Sbjct: 299 GVIV--------PVPTRIVRLGGRRVKNCVGGAWHTIIGTVTGEQYIMG 339



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 75/148 (50%), Gaps = 10/148 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFE-------KHSLKALACGGAHTLFLTETGCVYA 94
           ++GN   G LG+    +   P+V SA +       KH ++ + CG  HT+ LT  G VY 
Sbjct: 173 MFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQ-IGCGLQHTVALTAAGGVYC 231

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            G N  GQLG  +        L    L   + + ++ G  H+ A+T   ++Y +G + +G
Sbjct: 232 WGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHG 291

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           QLGLG++   ++P+PT++  L G   K 
Sbjct: 292 QLGLGRRGV-IVPVPTRIVRLGGRRVKN 318



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 106/280 (37%), Gaps = 70/280 (25%)

Query: 144 LYMWGKNSNGQLGLGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++  G NS GQLG G    +  +P     +        +   G+E + A+T  G VL +G
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
            G  G+LG G          + S   P+                           RV++ 
Sbjct: 70  NGVKGQLGIGN---------TDSHSNPQ---------------------------RVHLL 93

Query: 263 GDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             + V KM                         G  H+  LT  G+LY +G N +G LG+
Sbjct: 94  SGKGVVKM-----------------------AAGLEHSLALTESGDLYAFGDNLSGQLGL 130

Query: 323 GS--IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHS 379
           G        +P++V  P   + + Q++CG  HTA + S G++  +G     G     GH+
Sbjct: 131 GHNFTAKEQTPQKVP-PLGRAKITQLACGQDHTAVLTSSGELFMFG-NNRDGALGVAGHA 188

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +      G  +    P +V   +    +Q+ CG  HT AL
Sbjct: 189 N-----EGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVAL 223


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 9/259 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 46  GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 105

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 106 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 165

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L      ++ G   
Sbjct: 166 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQL------ALSGNSA 218

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++     +    P 
Sbjct: 219 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQ 278

Query: 283 LISKL-PYSEEVVCGGYHT 300
           LI  +  +  ++ CG YHT
Sbjct: 279 LIEGIGGHVSQIECGSYHT 297



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 24  LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 81

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 82  KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 140

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 141 LSEDGQVFSWGSNRQGQLGLGNNL--------CSQASPQKVKSLEGIPLAQVAAGGTHSF 192

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 193 ALSLMGTSFGWGNNRSGQLAL-SGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 251

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
            G+++T+G       G  S  + HSP   +G     P         V Q+ CG  HT A 
Sbjct: 252 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 300

Query: 356 -ISEGKILTWGWGGS 369
             + G++++ G G S
Sbjct: 301 VYTTGQVVSLGRGPS 315



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 38/318 (11%)

Query: 114 EPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           +P R+ +G   ++++ ++G  HS  +  +  +Y  G NS GQ  LG+K+ +    P  ++
Sbjct: 11  QPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQ--LGQKSPQSTKRPEPIQ 68

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS +     + G E SVAV   G+V +WGAG  G+LG G+   I         + P  I
Sbjct: 69  ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEI--------SFMPTKI 120

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISKL 287
             L G+K+   + G  HS  + E+G+V+ +G     ++     L  + +  +  SL   +
Sbjct: 121 NSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSL-EGI 179

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVD 344
           P + +V  GG H+  L+  G  + WG+N +G L +    + + ++ P  + G      V 
Sbjct: 180 PLA-QVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNVV 237

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN-FGE 402
            +SCG++HT+ ++E G++ T+G             SS  QL H        P ++   G 
Sbjct: 238 YISCGYEHTSVLTEDGQVFTFGG------------SSSEQLQHSPRSGRGGPQLIEGIGG 285

Query: 403 NVKALQVSCGFNHTGALL 420
           +V   Q+ CG  HT A +
Sbjct: 286 HVS--QIECGSYHTIAYV 301



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 122/266 (45%), Gaps = 29/266 (10%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 97  WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 156

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 157 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 216

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S   G
Sbjct: 217 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGG 276

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P+LI+ + G   +I    +   A +   G+V   G               R
Sbjct: 277 ---------PQLIEGIGGHVSQIECGSYHTIAYVYTTGQVVSLG---------------R 312

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTS 305
            PS  S   + +E  C    TC+L++
Sbjct: 313 GPSCTSNATH-QEAACSDV-TCLLSA 336



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 24/259 (9%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 62

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 63  RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 122

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 123 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 181

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            QV+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P  +   +
Sbjct: 182 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKPHSIGALK 232

Query: 403 NVKALQVSCGFNHTGALLE 421
            +  + +SCG+ HT  L E
Sbjct: 233 TLNVVYISCGYEHTSVLTE 251


>gi|147920282|ref|YP_685948.1| regulator of chromosome condensation [Methanocella arvoryzae MRE50]
 gi|110621344|emb|CAJ36622.1| predicted regulator of chromosome condensation [Methanocella
           arvoryzae MRE50]
          Length = 451

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 144/285 (50%), Gaps = 13/285 (4%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ +YG+LG G+     + V      +  + A++ G  H L L   G V+A G N FGQ+
Sbjct: 100 GDNEYGQLGDGTRVDSSKAVQVQCLSE--VVAISAGDCHNLALKRDGTVWAWGCNLFGQI 157

Query: 104 GISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G ++N+G+  L P+++ GL   V +IS GY  S AIT DG ++ WG N  GQ+G G K  
Sbjct: 158 G-NDNVGHDELTPVQVPGLSG-VKEISAGYMGSKAITGDGTVWAWGINEYGQIGDGTKEI 215

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +P+   +  +S I T +    +  S+A+   G V +WG  G G+LG   E ++   L 
Sbjct: 216 RSLPVRISINNVSAIDTGE----YGTSIALKSDGSVWTWGNNGQGQLGDPAEDTLSMMLP 271

Query: 223 STSEYTPRLIKELEG--VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM--LFQEGNHA 278
            ++  + RL+    G    V   +AG  +S  + ++G ++++G+    +     + G  +
Sbjct: 272 VSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGENQEGRFGNGLKFGRDS 331

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            RP ++  L     V  G  +   L+  G +Y WG N  G +G G
Sbjct: 332 IRPVIVPGLNNIVSVKAGASYMLALSDDGTVYGWGKNIFGAVGNG 376



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 87/186 (46%), Gaps = 19/186 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT-LFLTETGCVYATGLNDFG 101
           WG  +YG++G G+ E R  PV  S    +++ A+  G   T + L   G V+  G N  G
Sbjct: 200 WGINEYGQIGDGTKEIRSLPVRISI---NNVSAIDTGEYGTSIALKSDGSVWTWGNNGQG 256

Query: 102 QLGISENIGYSLEPLRISGLKKE------------VVQISTGYHHSSAITVDGELYMWGK 149
           QLG       S+  L +S L  E            V  +S G  +S A+  DG L++WG+
Sbjct: 257 QLGDPAEDTLSMM-LPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGTLWVWGE 315

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N  G+ G G K  +    P  V  L+ I + +A  G    +A++  G V  WG    G +
Sbjct: 316 NQEGRFGNGLKFGRDSIRPVIVPGLNNIVSVKA--GASYMLALSDDGTVYGWGKNIFGAV 373

Query: 210 GHGQES 215
           G+G+ S
Sbjct: 374 GNGERS 379



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 13/135 (9%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEK---------HSLKALACGGAHTLFLTETGC 91
           WGN   G+LG  + +  S   PV     E+         +++ +++ G  ++L + + G 
Sbjct: 250 WGNNGQGQLGDPAEDTLSMMLPVSNLGSERLVPGKTGGLYNVTSVSAGARNSLAVKDDGT 309

Query: 92  VYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           ++  G N  G+ G     G  S+ P+ + GL   +V +  G  +  A++ DG +Y WGKN
Sbjct: 310 LWVWGENQEGRFGNGLKFGRDSIRPVIVPGLNN-IVSVKAGASYMLALSDDGTVYGWGKN 368

Query: 151 SNGQLGLGKKAAKVI 165
             G +G G+++  V+
Sbjct: 369 IFGAVGNGERSETVV 383


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 166/334 (49%), Gaps = 29/334 (8%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACG---GAHTLFLTETGCVYATGLND 99
           G G YGRLGLG   +    +    FE H ++K ++       HTL  T  G V++ G  D
Sbjct: 438 GKGSYGRLGLGD-SNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDGD 496

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +G+LG   +       L    L+ K VV +S GY HS+A++ DGELY WG+   G+LG G
Sbjct: 497 YGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFGRLGHG 556

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSI 217
              ++ IP  T V+ +S +   + + G   ++A++  G+ V S+G G +G+LGHG  + +
Sbjct: 557 DSNSRNIP--TLVKDISNV--GEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRV 612

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P++++ L+G+ ++   AG   S  +   G+VY +G  A       E   
Sbjct: 613 ---------YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEAT- 662

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
           A RP LI +L  +   ++  G  H   L+   E+Y WG+N  G  G G S   +  P++V
Sbjct: 663 ALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKV 722

Query: 335 QGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
            G      + Q+S G  H    TA   + +++ W
Sbjct: 723 VG-LDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 161/343 (46%), Gaps = 39/343 (11%)

Query: 86  LTETGCVYATGLNDFGQL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE 143
           ++ET  VY  G N   QL  G  E I   L+P +++    +   I  G + +  I+ DG 
Sbjct: 378 VSETCEVYVWGSNSSHQLVEGTQEKI---LQP-KLAATFADAQTIEAGQYCTFVISSDGS 433

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE-QSVAVTGGGKVLSWG 202
           +   GK S G+LGLG    +        E    I    ++ G +  ++A T  G+V SWG
Sbjct: 434 VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVFSWG 493

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYI 261
            G  G+LGHG  S        T +Y P+LI+  L+G  V   +AG+ HSA + E+G +Y 
Sbjct: 494 DGDYGKLGHGNSS--------TQKY-PKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYT 544

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE-LYTWGSNENGCL 320
           +G+    ++   + N    P+L+  +    EV CG  HT  L+  G  ++++G  +NG L
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKL 604

Query: 321 GIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 376
           G G  + ++ P   E +QG F    + +V  G + + A+ S G++  WG G   G  S +
Sbjct: 605 GHGDTNRVYKPKVVEALQGMF----IRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSE 660

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             +             + P ++      + + +S G +H  AL
Sbjct: 661 ATA-------------LRPKLIEELATTRVVDISIGDSHCLAL 690



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 16/227 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+GDYG+LG G+  ++  P ++    +   +  ++ G  H+  ++E G +Y  G  DFG
Sbjct: 492 WGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGDFG 551

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           +LG  ++   ++ P  +  +   V ++S G  H+ A++ DG  ++ +G   NG+LG G  
Sbjct: 552 RLGHGDSNSRNI-PTLVKDISN-VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGD- 608

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +  P  VE L G+F ++   G + S+A+T  G+V +WG G    LG G  SS    
Sbjct: 609 -TNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGCG--SSEATA 663

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           LR      P+LI+EL   +V   + G  H   +  +  VY +G+ ++
Sbjct: 664 LR------PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSM 704



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 7/163 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G GD G+LG G     ++P V  A +   ++ +  G   +L LT TG VYA G      
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--AC 653

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  I  L    VV IS G  H  A++ D E+Y WG NS GQ G G   
Sbjct: 654 LGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNST 713

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG---GGKVLSW 201
             +   P KV  L G+  +Q + G   S+A T      +V++W
Sbjct: 714 GPITK-PKKVVGLDGVAIQQISAGTSHSLAWTALPRDRQVVAW 755



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 18/211 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG GD+GRLG G   SR  P +       ++  ++CG +HT+ L++ G  V++ G  D G
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSHTIALSKDGRTVWSFGGGDNG 602

Query: 102 QLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG  +      +P  +  L+   + ++  G   S A+T  G++Y WG      LG G  
Sbjct: 603 KLGHGDT-NRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSS 659

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            A  +  P  +E L+       ++G    +A++   +V +WG    G+ G G        
Sbjct: 660 EATAL-RPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGN------- 711

Query: 221 LRSTSEYT-PRLIKELEGVKVKIAAAGFLHS 250
             ST   T P+ +  L+GV ++  +AG  HS
Sbjct: 712 --STGPITKPKKVVGLDGVAIQQISAGTSHS 740


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 165/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G      V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG--IPERVIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEVTV--GKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 246

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 247 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 293

Query: 417 GALLEYV 423
             L E V
Sbjct: 294 VVLTEKV 300



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++       V   +CG  
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRN 135

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQV 409
           HT       +++   GG +      G ++ GQLG G  +D D  H  IV F       Q+
Sbjct: 136 HT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTPADTIKQL 183

Query: 410 SCGFNHTGALLE 421
           S G N + AL E
Sbjct: 184 SAGANTSAALTE 195



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 160/335 (47%), Gaps = 19/335 (5%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  GS E   +P +  AF   + + +  G   T  +   G V A G   +G
Sbjct: 381 VWGSNSSHQLAEGSQEKILQPKLSPAFA--NAQTIEAGQYCTFVVYSDGTVRACGKGSYG 438

Query: 102 QLGISE-NIGYSLEPLRISGLKKEVVQISTGYH---HSSAITVDGELYMWGKNSNGQLGL 157
           +LG+ + N   +L+ L     +  + +IS+      H+ A+T DGE++ WG    G+LG 
Sbjct: 439 RLGLGDSNNQTTLKKLNFDH-RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGH 497

Query: 158 GKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G  + +    P +++  L G   K  + G+  S AVT  G++ +WG G  GRLGHG  + 
Sbjct: 498 GNSSTQ--KYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNR 555

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            LG   +   Y P++I+ L G+ ++    G   S  +   G+++ +G  A       E  
Sbjct: 556 KLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPEST 615

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
            A RP L+ +L  +   +V CG  H   LT   E+Y WG+N  G  G G S   +  P++
Sbjct: 616 -ALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGNNAMGQCGQGHSQSPITKPKK 674

Query: 334 VQGPFSESPVDQVSCGWKH----TAAISEGKILTW 364
           V G      V Q+S G  H    TA  ++ +++ W
Sbjct: 675 VVG-LDGVTVHQISAGTSHSLAWTALPTDRQVVAW 708



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 41/318 (12%)

Query: 123 KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE---------- 172
           ++++Q+      S     D ++    K S+G   L   A  ++ +P++V           
Sbjct: 295 QQILQVMENSGGSGNDKRDHQITDTNKTSDGMFPL-YLAGMLLSLPSQVAWLASDYARSC 353

Query: 173 -CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            C S +    ++ G E    VT   +V  WG+  S +L  G +  IL          P+L
Sbjct: 354 VCPSPVPIDDSSTG-ENGNMVTENSEVYVWGSNSSHQLAEGSQEKIL---------QPKL 403

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
                    +   AG   +  +  +G V   G  +  ++   + N+    + + KL +  
Sbjct: 404 SPAF--ANAQTIEAGQYCTFVVYSDGTVRACGKGSYGRLGLGDSNNQ---TTLKKLNFDH 458

Query: 292 EVVCGGY--------HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             V            HT  LT+ GE+++WG  + G LG G+      P+++QG      V
Sbjct: 459 RYVIRKISSSKGSDGHTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVV 518

Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH-SSGGQLGHGNDVDYIHPTIVNFG 401
             +S G++H+AA++E G++ TWG     G +   GH  S  +LGHG+      P ++   
Sbjct: 519 KSISAGYRHSAAVTEDGELFTWG----EGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEAL 574

Query: 402 ENVKALQVSCGFNHTGAL 419
             +   +V CG   + AL
Sbjct: 575 VGLYIRKVCCGSQSSLAL 592


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 171/367 (46%), Gaps = 46/367 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STG 131
           ++ +ACGG H   +T+ G V+  G    G+LG   +   S  P  +  L     ++ + G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVACG 369

Query: 132 YHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +H  A+T+ G+LY WG   +S G LG G   +  IP       L  +     A G   +
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGP-LEEVRVASIACGPWHT 428

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGH    S          Y+PR ++ L+G++   AA G  H
Sbjct: 429 AVVTTAGQLFTFGDGTFGVLGHNDRQSA---------YSPREVESLKGLRTVRAACGVWH 479

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EEV 293
           +A + E            +G+++ +GD   DK     G+  +R  P+ ++ L      +V
Sbjct: 480 TAAVVEVMVGSSSASSCSSGKLFTWGDG--DKGRLGHGDKEQRLVPTCVAALVDHNFRKV 537

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
            CG   T  LT+ GE++T GS+  G LG    D    P  V+G   ++ V+ ++CG  H 
Sbjct: 538 ACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADG-KLPGMVEGRLVDAYVEDIACGAHHV 596

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           A ++ + ++ TWG G +            G+LGHG+  D   PT+V   +  +   ++CG
Sbjct: 597 ACVTLKSEVYTWGKGAN------------GRLGHGDQEDRNTPTLVEALKEKQVKSIACG 644

Query: 413 FNHTGAL 419
              T A+
Sbjct: 645 ATFTAAV 651



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 47/347 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    + + +ACG  H   +T +G +Y    G +  
Sbjct: 333 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSL 392

Query: 101 GQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P R++G  +EV    I+ G  H++ +T  G+L+ +G  + G LG  
Sbjct: 393 GLLGHGNDISHWI-PKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHN 451

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +   P   +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 452 DRQSAYSP--REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDK 509

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L     +  A G   +  +   G V+  G   
Sbjct: 510 GRLGHGDKEQRL---------VPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS-- 558

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              M  Q G+    P    KLP          Y E++ CG +H   +T   E+YTWG   
Sbjct: 559 --SMFGQLGD----PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           NG LG G  +  ++P  V+    E  V  ++CG   TAA+   K L+
Sbjct: 613 NGRLGHGDQEDRNTPTLVEA-LKEKQVKSIACGATFTAAVCLHKWLS 658



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 53/316 (16%)

Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           G HH+ A+   G++YMWG+            ++G G       P+P  +E    +  +  
Sbjct: 258 GSHHAEAL---GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYV 314

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + +  VT  G+V +WG    GRLGHG +  +           P+L++ L     ++
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 365

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE----EVVCG 296
            A G  H   +  +G +Y +GD      L   GN      P  ++  P  E     + CG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACG 424

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            +HT V+T+ G+L+T+G    G LG       +SP  V+       V + +CG  HTAA+
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTV-RAACGVWHTAAV 483

Query: 357 SE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            E             GK+ TWG G              G+LGHG+    + PT V    +
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDK------------GRLGHGDKEQRLVPTCVAALVD 531

Query: 404 VKALQVSCGFNHTGAL 419
               +V+CG + T AL
Sbjct: 532 HNFRKVACGHSLTVAL 547



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++          P L+  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  E V CG YH C +T  G+LYTWG   +  G LG G+ D+ H  P+RV GP  E  V
Sbjct: 360 SSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGN-DISHWIPKRVNGPLEEVRV 418

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++CG  HTA ++  G++ T+G     GTF        G LGH +      P  V   +
Sbjct: 419 ASIACGPWHTAVVTTAGQLFTFG----DGTF--------GVLGHNDRQSAYSPREVESLK 466

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 467 GLRTVRAACGVWHTAAVVEVM 487


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +      VQ++ G     A+TV+G++Y  G+ +
Sbjct: 1796 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYACGEAT 1855

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V P+P +V  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 1856 NGRLGLGVSSGTV-PVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKL 1914

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 1915 GH--------FSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965

Query: 270  MLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1966 LGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2025

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2026 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2072

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2073 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2109



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 174/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 2793 WGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL-IGGEQTLFAVTADGKLYATGYGAGG 2851

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 2852 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2909

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 2910 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSD---- 2963

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ E+  V+ +GD    K+     
Sbjct: 2964 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGS 3018

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  +  L    + +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 3019 DGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 3078

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    +E G++ TW            G +  GQLG G     
Sbjct: 3079 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 3125

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 3126 QRPRLVAALQGKKVNRVACGSAHTLA 3151



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 1834 GGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRH 1893

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+T DG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1894 ATALTADGKVFSWGEGDDGKLGHFSRXN--CDKPRLIEALKSRRIRDIACGSSHSAALTS 1951

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 1952 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLVGHRVVQVACGSRDAQTLA 2002

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2003 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2062

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2063 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2117

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2118 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 1852 GEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDD 1911

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG         +P  I  LK + +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 1912 GKLGHFSRXNCD-KPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 1970

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 1971 NTTQLKPKMVKV--LVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2024

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2025 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2079

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2080 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2139

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 2140 G-LEGQKITRVACGSSHSVA 2158



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 1906 WGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYGR 1965

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    VVQ++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 1966 LGHGDNT-TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2023

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2024 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2080

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2081 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2129

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2130 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2161



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 139/316 (43%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 2859 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2917

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G LY WGK   G+LG      ++ P    VE 
Sbjct: 2918 PRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 2975

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 2976 LQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3026

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            +  L G+       G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3027 VDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3086

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3087 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3145

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 3146 SAHTLAWSTSKPASAG 3161



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 33/335 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G VY  G N  GQLG  E     + P     L      Q+  G     A+T DG+LY  
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKV-PTPCEALAALRPAQLIGGEQTLFAVTADGKLYAT 2845

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+  LG    + +  PT +E +  +F K+ A+  G +  +A++  G+V SWG   
Sbjct: 2846 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 2903

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G  
Sbjct: 2904 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDTVWSWGDGDYGKLG 3014

Query: 322  IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
             G  D    P +V        V +V CG + + A+++ G + TWG G  H          
Sbjct: 3015 RGGSDGCKVPMKVDALTGLGAV-KVECGSQFSVALTKSGAVYTWGKGDYH---------- 3063

Query: 381  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3064 --RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3096



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1788 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVK-----KVAVHSGGR-HATALTA 1899

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 1900 DGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWG 1959

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 1960 LGEYGRLGHGDNTTQLKPKMVKVLVGHRVV-QVACGSRDAQTLALTDEGLVFSWG----D 2014

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2015 GDF--------GKLGRGGSEG------CNVPQNIERLNGQGVCQIECGAQFSLAL 2055


>gi|330822422|ref|XP_003291651.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
 gi|325078150|gb|EGC31817.1| hypothetical protein DICPUDRAFT_156281 [Dictyostelium purpureum]
          Length = 453

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 170/370 (45%), Gaps = 81/370 (21%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + +  +   +K +A G  HTL LTE   V++ G+    QLG+       L P+ I  L
Sbjct: 142 PSLVTPLKDFKIKQVAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGSTENQPL-PVEIESL 200

Query: 122 KK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC---LSG 176
            K   ++++  G+ HS  +T DG+++ WG   + Q G G  + + I IP  ++       
Sbjct: 201 SKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGF-SEEPIHIPKMIKTNYKFKN 259

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
           IFT     G + ++A+T  G+V SWG+G  G+LGHG   ++           P+LI+ ++
Sbjct: 260 IFT-----GSDFNLAITNDGRVCSWGSGEFGQLGHGDTKNV---------EAPKLIQSIQ 305

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            +         +H+  I+ N R+Y +      KM                      V CG
Sbjct: 306 PL---------VHTNLINTN-RIYEY------KM----------------------VACG 327

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAA 355
             H  ++ + G+L T G N NG LG G     H  P +++  F    V +VS G  H+A 
Sbjct: 328 FSHALIIDNDGKLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSAC 387

Query: 356 ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP-TIVNFGE------NVKA 406
           I+E GK+  WG G              G+LG+G  V D + P  +++  E      N K 
Sbjct: 388 ITESGKLYIWGNGNK------------GKLGNGKSVGDQLTPLELIDIDENNTDPSNQKV 435

Query: 407 LQVSCGFNHT 416
           L +SCGF+HT
Sbjct: 436 LNISCGFDHT 445



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 119/237 (50%), Gaps = 27/237 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G G   +LG+GS E++  PV   +  K  ++  L CG  H+L LT  G ++  G     
Sbjct: 175 FGVGSEYQLGVGSTENQPLPVEIESLSKLGNIIKLECGWGHSLVLTSDGDIFTWGFTQDS 234

Query: 102 QLGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           Q G     G+S EP+ I  + K   +   I TG   + AIT DG +  WG    GQLG G
Sbjct: 235 QTG----HGFSEEPIHIPKMIKTNYKFKNIFTGSDFNLAITNDGRVCSWGSGEFGQLGHG 290

Query: 159 K----KAAKVIP-----IPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                +A K+I      + T +   + I+  K  A GF  ++ +   GK+L+ G  G+G+
Sbjct: 291 DTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDGKLLTLGWNGNGQ 350

Query: 209 LGHGQESSILGFLRSTSEYTP-RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
           LG G        ++  +   P +L  + +G KV   +AG  HSACI E+G++YI+G+
Sbjct: 351 LGSG--------VKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWGN 399



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 43/318 (13%)

Query: 124 EVVQISTGYHHSSAITVD-GELYMWGKNSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQ 181
           E   I  G++H+  ++ +  +LY  G  S   +  + K+      IP+ V  L     KQ
Sbjct: 96  ECKDIVCGHYHTMLVSKEKDQLYSCGWTSFVAMDRVNKETNFKSIIPSLVTPLKDFKIKQ 155

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
            A G   ++ +T   +V S+G G   +LG G          + ++  P  I+ L  +  +
Sbjct: 156 VAGGRRHTLVLTEDFRVFSFGVGSEYQLGVGS---------TENQPLPVEIESLSKLGNI 206

Query: 241 KIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
                G+ HS  +  +G ++ +G   D        +E  H   P +I      + +  G 
Sbjct: 207 IKLECGWGHSLVLTSDGDIFTWGFTQDSQTGHGFSEEPIHI--PKMIKTNYKFKNIFTGS 264

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG--PFSESPV---------DQV 346
                +T+ G + +WGS E G LG G    + +P+ +Q   P   + +           V
Sbjct: 265 DFNLAITNDGRVCSWGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMV 324

Query: 347 SCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD-YIHPTIVNFG-EN 403
           +CG+ H   I ++GK+LT GW G+            GQLG G   D ++ PT + F  + 
Sbjct: 325 ACGFSHALIIDNDGKLLTLGWNGN------------GQLGSGVKGDNHLVPTKLEFDFDG 372

Query: 404 VKALQVSCGFNHTGALLE 421
            K ++VS G NH+  + E
Sbjct: 373 EKVVKVSAGRNHSACITE 390



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 14/131 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK------------HSLKALACGGAHTLFLTETG 90
           WG+G++G+LG G  ++   P +  + +             +  K +ACG +H L +   G
Sbjct: 279 WGSGEFGQLGHGDTKNVEAPKLIQSIQPLVHTNLINTNRIYEYKMVACGFSHALIIDNDG 338

Query: 91  CVYATGLNDFGQLGISENIGYSLEP--LRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            +   G N  GQLG        L P  L      ++VV++S G +HS+ IT  G+LY+WG
Sbjct: 339 KLLTLGWNGNGQLGSGVKGDNHLVPTKLEFDFDGEKVVKVSAGRNHSACITESGKLYIWG 398

Query: 149 KNSNGQLGLGK 159
             + G+LG GK
Sbjct: 399 NGNKGKLGNGK 409


>gi|7305093|ref|NP_038817.1| secretion-regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|38257405|sp|Q80YD6.2|SRGEF_MOUSE RecName: Full=Secretion-regulating guanine nucleotide exchange
           factor; AltName: Full=Deafness locus-associated putative
           guanine nucleotide exchange factor; Short=DelGEF;
           AltName: Full=Guanine nucleotide exchange factor-related
           protein
 gi|6434206|emb|CAB60840.1| deafness locus associated putative guanine nucleotide exchange
           factor [Mus musculus]
 gi|110645832|gb|AAI19534.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|110645834|gb|AAI19535.1| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|127798601|gb|AAH49603.2| Secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
 gi|148690982|gb|EDL22929.1| secretion regulating guanine nucleotide exchange factor [Mus
           musculus]
          Length = 464

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 176/412 (42%), Gaps = 61/412 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHG 371
           PE             QGP +  P          ++SCG +H  A+   K  +WGW     
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW----- 358

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 421
                  +  G  G G + +   PT V        + L V CG  H+ A+ +
Sbjct: 359 -------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
            L   ++  L  P+R++   F +  V  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
            WG     S    C G  +        P RV G  + + V  V+ G  H+A++++ G++ 
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234

Query: 363 TWG 365
            WG
Sbjct: 235 VWG 237


>gi|74219054|dbj|BAE26671.1| unnamed protein product [Mus musculus]
          Length = 464

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 176/412 (42%), Gaps = 61/412 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGWGGSHG 371
           PE             QGP +  P          ++SCG +H  A+   K  +WGW     
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW----- 358

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHTGALLE 421
                  +  G  G G + +   PT V        + L V CG  H+ A+ +
Sbjct: 359 -------NEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVCQ 403



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
            L   ++  L  P+R++   F +  V  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
            WG     S    C G  +        P RV G  + + V  V+ G  H+A++++ G++ 
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234

Query: 363 TWG 365
            WG
Sbjct: 235 VWG 237


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 179/406 (44%), Gaps = 55/406 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+G  E        +A +  ++ A+  G  ++L +   G ++  G N  G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---- 157
           LG          P  +  L    +VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAER 135

Query: 158 ---GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
              G +A  + IPIP    C   +  +Q A G   SV +T  G V +WG           
Sbjct: 136 KEDGTRALRRDIPIPQG--CAPKLKVRQVAAGGTHSVVLTQDGHVWTWG----------- 182

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +    G ++  S  TP  ++ LE   VK+ A G  H+  + E+G ++ +G+    ++   
Sbjct: 183 QPWPPGDIKQIS--TPVRVQGLE--NVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS- 330
           +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G     H  
Sbjct: 239 DTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 298

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V+    E  + QVSCG  H+ A++ +G++ ++G  G H           G+LG+G  
Sbjct: 299 PQKVELLAGED-IIQVSCGGTHSVALTRDGRMFSYG-RGDH-----------GRLGYGRK 345

Query: 390 VDYIHPTIV------------NFGENVKALQVSCGFNHTGALLEYV 423
           V   HP  V            + G   +A  V+CG  HT A+  + 
Sbjct: 346 VTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIATWT 391



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 145/333 (43%), Gaps = 25/333 (7%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLR--ISGLKKEVVQ-ISTGYHHSSAITVDGELYMW 147
            V A G  + GQLG+    GY  E     ++ L    V  +  G  +S AI  DG L+ W
Sbjct: 12  AVLAWGSGEDGQLGMG---GYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTW 68

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  G LG   +  K    P  V+ L+G+   QAA+G    +AV   G+  +WG    G
Sbjct: 69  GWNQRGTLGHPPET-KTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWGGNEYG 127

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           + G   E    G  R+     P        +KV+  AAG  HS  + ++G V+ +G    
Sbjct: 128 QCGEEAERKEDG-TRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWP 186

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              + Q       P  +  L   + +  G +H   LT  G L+ WG+NE G LG G    
Sbjct: 187 PGDIKQ----ISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQP 242

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
              P RV+G    S VD  + GW  TA   EG++  WG  G H           G+LG G
Sbjct: 243 RSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWG-RGEH-----------GRLGFG 290

Query: 388 ND-VDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +D   ++ P  V        +QVSCG  H+ AL
Sbjct: 291 DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVAL 323


>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
          Length = 1060

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 183/407 (44%), Gaps = 77/407 (18%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLT-------ETGCVYA 94
           WG   +  LG G  + +   P V   F    +  ++CG  H+  L          G V+ 
Sbjct: 61  WGKVPFNCLGQGVEVNTSEFPRVIPFFSGRRVTQVSCGDYHSAVLVCSSRENINAGTVFT 120

Query: 95  TGLNDFGQLG---------ISENIGYS-----------LEPLRIS-GLKKEVVQISTGYH 133
            GL + G+LG         IS+ IG              +P+ +S GL+  VV IS G +
Sbjct: 121 FGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGLRNNVVTISCGAN 180

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+   T DG LY WG  ++G LG G  A + IP+  KV      F  + A G   S+A+ 
Sbjct: 181 HTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPV--KVIFPQDTFISKCAAGARHSMALD 238

Query: 194 GGGKVLSWGAGG-----------SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
             G + SWG GG           +GRLG       LG  RS   +TP LI+  +  +V  
Sbjct: 239 IKGNIWSWGYGGIVHSIFHIIHRNGRLG-------LGSTRSC--FTPNLIEIFDTYEVFQ 289

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYH 299
            + G  HSAC+D  G VY +G     K+ L    +    P+++  L   +  +V CG  +
Sbjct: 290 ISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNILSDVLEPTIVQSLKGIHIIQVSCGSGN 349

Query: 300 TCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQGPFSESPVDQ--VSCGWKHTA 354
           T  L+S G++Y WGS         G+ S   ++SPE    P +E+      V+ G    A
Sbjct: 350 TLALSSSGKIYQWGSTLGFNKQTDGLIS-HTVYSPE----PVAETGFKNIFVTSGPYSFA 404

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           AI+  G +LTWG G            +G +LGHG+  D++ P  V++
Sbjct: 405 AINIFGDLLTWGLG------------TGYRLGHGDSKDHVIPKFVSY 439



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 140/330 (42%), Gaps = 63/330 (19%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           GRLGLGS  S + P +   F+ + +  ++CG +H+  L   G VY  G    G+LG+   
Sbjct: 263 GRLGLGSTRSCFTPNLIEIFDTYEVFQISCGDSHSACLDRFGTVYTWGSCRGGKLGLGNI 322

Query: 109 IGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI-- 165
           +   LEP  +  LK   ++Q+S G  ++ A++  G++Y WG      LG  K+   +I  
Sbjct: 323 LSDVLEPTIVQSLKGIHIIQVSCGSGNTLALSSSGKIYQWGST----LGFNKQTDGLISH 378

Query: 166 ----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS----- 216
               P P        IF       F    A+   G +L+WG G   RLGHG         
Sbjct: 379 TVYSPEPVAETGFKNIFVTSGPYSF---AAINIFGDLLTWGLGTGYRLGHGDSKDHVIPK 435

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIA------------------AAGFLHSACIDENGR 258
            + +LR T  Y   L+K  +    K+                   A G  H A +  NG 
Sbjct: 436 FVSYLR-TRVYIDNLLKTYDEAAFKVEDTVEKTVNPYDERRIQQIAVGDAHGALLTCNGT 494

Query: 259 VYIFG--------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
           VY +G              +   + +LF   NH    S I+K      + CG  HT  +T
Sbjct: 495 VYTWGANNGTGCNSTTEPLENYCEPILF---NHFS--SKITK------IACGSSHTLAVT 543

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             G L++WGSNE+G LG G +     P+ V
Sbjct: 544 INGLLFSWGSNESGQLGHGDLRSRVVPDSV 573



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 114/257 (44%), Gaps = 41/257 (15%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI--- 253
            VLSWG      LG G E +       TSE+ PR+I    G +V   + G  HSA +   
Sbjct: 57  NVLSWGKVPFNCLGQGVEVN-------TSEF-PRVIPFFSGRRVTQVSCGDYHSAVLVCS 108

Query: 254 -DEN---GRVYIFG-----------DRAVDKMLFQEGNHAR-RPSLISKLPYSE------ 291
             EN   G V+ FG           D   + +  Q G   +  PS  + +P         
Sbjct: 109 SRENINAGTVFTFGLGNSGRLGYHIDTNSEIISQQIGTDDKDEPSWCTPVPQPVGMSIGL 168

Query: 292 -----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 + CG  HT V T+ G LY WG   +G LG GS+   + P +V  P  ++ + + 
Sbjct: 169 RNNVVTISCGANHTLVTTADGYLYAWGVGAHGVLGNGSVANRYIPVKVIFP-QDTFISKC 227

Query: 347 SCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
           + G +H+ A+  +G I +WG+GG   +     H +G +LG G+      P ++   +  +
Sbjct: 228 AAGARHSMALDIKGNIWSWGYGGIVHSIFHIIHRNG-RLGLGSTRSCFTPNLIEIFDTYE 286

Query: 406 ALQVSCGFNHTGALLEY 422
             Q+SCG +H+  L  +
Sbjct: 287 VFQISCGDSHSACLDRF 303



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 119/290 (41%), Gaps = 43/290 (14%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           ++ + QI+ G  H + +T +G +Y WG N+        +  +    P      S   TK 
Sbjct: 473 ERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSKITK- 531

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   ++AVT  G + SWG+  SG+LGHG        LRS     P  +  +E     
Sbjct: 532 IACGSSHTLAVTINGLLFSWGSNESGQLGHGD-------LRS--RVVPDSVSNIENCIN- 581

Query: 242 IAAAGFLHSACI----------DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYS 290
              AG  +S CI          DE G +++FG     K+ L +    A        +   
Sbjct: 582 -VFAGIDNSGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREVNITGV 640

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
             V  G  H+  LTS G LY  G+   G LG G+     +  +V+   ++     V  G 
Sbjct: 641 HSVALGPMHSLALTSDGTLYAAGAGSGGRLGTGNTTNSFTFVQVK---TDHKFVAVGAGA 697

Query: 351 KHTAAISEGKILTWGWG-GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            H+ AIS    L +GWG G + TF E               D + PTI+N
Sbjct: 698 SHSLAISMENDL-YGWGEGKYLTFDE---------------DVLEPTIIN 731



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 21/257 (8%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FGQLGISENIGYSLEPLRISGLKKE 124
           + +++  ++ +A G AH   LT  G VY  G N+  G    +E +    EP+  +    +
Sbjct: 469 NPYDERRIQQIAVGDAHGALLTCNGTVYTWGANNGTGCNSTTEPLENYCEPILFNHFSSK 528

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP-----IPTKVECLSGIFT 179
           + +I+ G  H+ A+T++G L+ WG N +GQLG G   ++V+P     I   +   +GI  
Sbjct: 529 ITKIACGSSHTLAVTINGLLFSWGSNESGQLGHGDLRSRVVPDSVSNIENCINVFAGIDN 588

Query: 180 KQAALGF-EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
                    +++     G +  +G+   G+LG G+         +++  TPR   E+   
Sbjct: 589 SGCICSVSHENMMKDEYGTLWVFGSSTCGKLGLGEN-------MTSAVMTPR---EVNIT 638

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CG 296
            V   A G +HS  +  +G +Y  G  +  ++    GN     + +      + V    G
Sbjct: 639 GVHSVALGPMHSLALTSDGTLYAAGAGSGGRL--GTGNTTNSFTFVQVKTDHKFVAVGAG 696

Query: 297 GYHTCVLTSGGELYTWG 313
             H+  ++   +LY WG
Sbjct: 697 ASHSLAISMENDLYGWG 713



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 86/360 (23%), Positives = 144/360 (40%), Gaps = 44/360 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA--------CGGAH-TLFLTETGCVY 93
           WG+ + G+LG G L SR  P   S  E + +   A        C  +H  +   E G ++
Sbjct: 551 WGSNESGQLGHGDLRSRVVPDSVSNIE-NCINVFAGIDNSGCICSVSHENMMKDEYGTLW 609

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
             G +  G+LG+ EN+  ++   R   +   V  ++ G  HS A+T DG LY  G  S G
Sbjct: 610 VFGSSTCGKLGLGENMTSAVMTPREVNITG-VHSVALGPMHSLALTSDGTLYAAGAGSGG 668

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G        +  K +     F    A G   S+A++    +  WG G         
Sbjct: 669 RLGTGNTTNSFTFVQVKTD---HKFVAVGA-GASHSLAISMENDLYGWGEG--------- 715

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL----HSACIDENGRVYIFGDRAVDK 269
               L F     E  P +I  +     +           HS  + ++G +  FGD +  +
Sbjct: 716 --KYLTFDEDVLE--PTIINTIPSTTGQAKVVALAVAANHSLVLSQSGNLSGFGDNSYGQ 771

Query: 270 M-LFQEGNHARRPSLISKLPYSEE--VVC---GGYHTCVLTSGGELYTWGSNENGCLGIG 323
           + +F     +    +   LP + +  +VC     Y +     GG+ ++WG  ++  LGIG
Sbjct: 772 LGVFLSMKSSANNFIKMPLPVNVQGNIVCVATSRYFSSCSNLGGDAFSWGLAKDHRLGIG 831

Query: 324 SI--DVLHSPERVQG-PFSESPVDQVSC-GWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
                +++ P  +         +D+     +KHT+      IL +     H  +S D HS
Sbjct: 832 ETKSKIIYKPTPIANTSMIGDLMDKFELDSYKHTSMSGYETILNYFLDELH--YSSDPHS 889


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LH  C+++                                
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG GS + L SP ++     E  ++  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 29/311 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV        V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   E  + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERVIE 288

Query: 409 V-SCGFNHTGA 418
           + +C   HT A
Sbjct: 289 IAACHSTHTSA 299



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GEL+ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 157/346 (45%), Gaps = 46/346 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +   +P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 304 WGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNA 363

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  +V  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 364 GLLGHGNDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTSTGQLFTFGDGTFGVLGHG 422

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + +  P +VE LSG+ T  AA G   + AV              GK+ +WG G   
Sbjct: 423 DR--ENVAYPREVESLSGLRTIAAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKN 480

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G V+  G    
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGHVFAMGS--- 528

Query: 268 DKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
             +  Q GN    P    KLP            EE+ CG YH  VLTS  E+YTWG   N
Sbjct: 529 -TVYGQLGN----PYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           G LG G I+   +P  V+    +  V  ++CG  +TAAI   K+++
Sbjct: 584 GRLGHGDIEDRKAPILVEA-LKDRHVKYIACGANYTAAICLHKLVS 628



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 47/364 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G+LG  + +++   ++P  +  L    V  ++ G 
Sbjct: 285 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDV---IQPRLVESLAVSTVDFVACGE 341

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T+ GE+Y WG  ++  G LG G   +  IP   ++   L G+       G   +
Sbjct: 342 FHTCAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIP--KRISGPLEGLQVASVTCGPWHT 399

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++ ++G G  G LGHG   ++           PR ++ L G++   AA G  H
Sbjct: 400 ALVTSTGQLFTFGDGTFGVLGHGDRENVA---------YPREVESLSGLRTIAAACGVWH 450

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCG 296
           +A + E           +G+++ +GD   +++   +     +P+ +  L  Y+  ++ CG
Sbjct: 451 TAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACG 510

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT+ G ++  GS   G LG    D    P  V+   S   V++++CG  H A +
Sbjct: 511 HSLTVGLTTSGHVFAMGSTVYGQLGNPYADG-KLPCLVEDKLSGESVEEIACGAYHVAVL 569

Query: 357 -SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            S  ++ TWG G +            G+LGHG+  D   P +V   ++     ++CG N+
Sbjct: 570 TSRNEVYTWGKGAN------------GRLGHGDIEDRKAPILVEALKDRHVKYIACGANY 617

Query: 416 TGAL 419
           T A+
Sbjct: 618 TAAI 621



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 130/304 (42%), Gaps = 49/304 (16%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+   ++  ++G  K A  V     + +P  +E    +     A G   +  VT
Sbjct: 237 GDVYIWGEVIYDNAVKIGADKNANYVSTRADVLLPRPLESNVVLDVHHIACGVRHAALVT 296

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G+V +WG    GRLGHG    ++          PRL++ L    V   A G  H+  +
Sbjct: 297 RQGEVFTWGEESGGRLGHGVGKDVI---------QPRLVESLAVSTVDFVACGEFHTCAV 347

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   GN      P  IS  P        V CG +HT ++TS G
Sbjct: 348 TMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISG-PLEGLQVASVTCGPWHTALVTSTG 406

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +L+T+G    G LG G  + +  P  V+   S       +CG  HTAA+ E         
Sbjct: 407 QLFTFGDGTFGVLGHGDRENVAYPREVES-LSGLRTIAAACGVWHTAAVVEVIVTQSSSS 465

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              GK+ TWG G  +            +LGHG+    + PT V    +    +++CG + 
Sbjct: 466 ISSGKLFTWGDGDKN------------RLGHGDKEPRLKPTCVPALIDYNFHKIACGHSL 513

Query: 416 TGAL 419
           T  L
Sbjct: 514 TVGL 517



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PR ++    + V   A G  H+A +   G V+ +G+ +  ++    G    +P L+  L 
Sbjct: 271 PRPLESNVVLDVHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLA 330

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  + V CG +HTC +T  GE+YTWG  ++  G LG G+ DV H  P+R+ GP     V
Sbjct: 331 VSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGN-DVSHWIPKRISGPLEGLQV 389

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             V+CG  HTA + S G++ T+G     GTF        G LGHG+  +  +P  V    
Sbjct: 390 ASVTCGPWHTALVTSTGQLFTFG----DGTF--------GVLGHGDRENVAYPREVESLS 437

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ +  +CG  HT A++E +
Sbjct: 438 GLRTIAAACGVWHTAAVVEVI 458


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 303 WGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  +V  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            +  + +  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKN 479

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + +     R      P LI++         A G   +  +  +GRV+  G   V
Sbjct: 480 RLGHGDKDA-----RLEPTCVPSLIED----NFHRIACGHSLTVGLTTSGRVFTMGS-TV 529

Query: 268 DKMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+         EE+ CG YH  VLTS  E++TWG   NG LG G 
Sbjct: 530 YGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVFTWGKGANGRLGHGD 589

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++   SP  V+    +  V  ++CG  +++AI
Sbjct: 590 VEDRKSPTLVEA-LKDRHVKYIACGSNYSSAI 620



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 45/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G ++  G    G+LG  + +N+   ++P  +  +    V  ++ G 
Sbjct: 284 IACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNV---VQPRLVEAMASTTVDFVACGE 340

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H+ A+T+ GELY WG  ++  G LG G   +  IP       L G+       G   + 
Sbjct: 341 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCGPWHTA 399

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G++ ++G G  G LGHG   ++           PR ++ L G++    A G  H+
Sbjct: 400 LITSTGQLFTFGDGTFGVLGHGDRENV---------SYPREVESLSGLRTIAVACGVWHT 450

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           A I E           +G+++ +GD   +++   + +    P+ +  L       + CG 
Sbjct: 451 AAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGH 510

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G ++T GS   G LG    D    P  V+  F+   V++++CG  H A + 
Sbjct: 511 SLTVGLTTSGRVFTMGSTVYGQLGNPQSDG-KLPCLVEDKFAGESVEEIACGAYHVAVLT 569

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N++
Sbjct: 570 SKNEVFTWGKGAN------------GRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYS 617

Query: 417 GAL 419
            A+
Sbjct: 618 SAI 620



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 19/218 (8%)

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           G E S   F   T    PR ++    + V   A G  H+A +   G ++ +G+ +  ++ 
Sbjct: 253 GAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLG 312

Query: 272 FQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDV 327
              G +  +P L+  +  +  + V CG +HTC +T  GELYTWG  ++  G LG G+ DV
Sbjct: 313 HGVGKNVVQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-DV 371

Query: 328 LH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            H  P+R+ GP     V  V+CG  HTA I S G++ T+G     GTF        G LG
Sbjct: 372 SHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFG----DGTF--------GVLG 419

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           HG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 420 HGDRENVSYPREVESLSGLRTIAVACGVWHTAAIIEVI 457



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 47/303 (15%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+    +  ++G  K A+   P     +P  +E    +   Q A G + +  VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG    GRLGHG   +++          PRL++ +    V   A G  H+  +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVV---------QPRLVEAMASTTVDFVACGEFHTCAV 346

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEE---VVCGGYHTCVLTSGGE 308
              G +Y +GD   +  L   G       P  I+      +   V CG +HT ++TS G+
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQ 406

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI------------ 356
           L+T+G    G LG G  + +  P  V+   S      V+CG  HTAAI            
Sbjct: 407 LFTFGDGTFGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAIIEVIVTQSSASV 465

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S GK+ TWG G  +            +LGHG+    + PT V         +++CG + T
Sbjct: 466 SSGKLFTWGDGDKN------------RLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLT 513

Query: 417 GAL 419
             L
Sbjct: 514 VGL 516


>gi|449502541|ref|XP_004161671.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 263

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 53/72 (73%), Positives = 60/72 (83%)

Query: 351 KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           K T  +  G I TWGWGGSHGTFS DGHSSGGQLGHG+DVDY+ PT ++ GENVK +QVS
Sbjct: 191 KPTYTLICGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVS 250

Query: 411 CGFNHTGALLEY 422
           CGFNHTGA+LEY
Sbjct: 251 CGFNHTGAILEY 262


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 182/409 (44%), Gaps = 59/409 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V     E  + QVSCG  H+ A++ +G+I ++G  G H           G+LG+G  
Sbjct: 293 PQKVNLLPGED-IIQVSCGGTHSVALTRDGRIFSFG-RGDH-----------GRLGYGRK 339

Query: 390 VD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 422
           V          +I P    F    +       A  V+CG  HT A++E+
Sbjct: 340 VTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 134/328 (40%), Gaps = 17/328 (5%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V A G  + GQLG+  +    L  +  +     V  +  G  +S AI  DG+L+ WG N 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            G LG   +  K    P+ V+ L+ +   QAA+G    +AV   G+  +WG    G+ G 
Sbjct: 67  RGTLGHPPET-KTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                  G         P+   +   + V+  AAG  HS  +   G V+ +G       +
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAQQ--LTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI 183

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G       P
Sbjct: 184 KQ----ISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             VQG    + VD  + GW  TA  +EG++  WG  G HG             G  +   
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLG---------FGDNDKSS 289

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + P  VN       +QVSCG  H+ AL
Sbjct: 290 KMLPQKVNLLPGEDIIQVSCGGTHSVAL 317


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 178/372 (47%), Gaps = 33/372 (8%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGC 91
            +R     WGN   G LGLG +E  +   P     FE  +++K++ACG  HTL +TE G 
Sbjct: 15  FRRLTMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQ 74

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
           +YA G NDFGQLG   + G   +  +I G++  V+  ++ G  HS A+   G+LY WG +
Sbjct: 75  LYACGSNDFGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSD 131

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           S GQLGL      +   P  V+ L+ +   Q + G++  +A+T  G++ +WG+       
Sbjct: 132 SCGQLGLETDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS------- 183

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             +   +   L   +   P L+  L G+ +   A G  HS  + ++G V+ +G     ++
Sbjct: 184 -NEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQL 242

Query: 271 LFQEGNHARRPSLISKLPYSE-EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVL 328
                     P+ +  +   + + + GG    V LT  G ++T G+   G LG GS    
Sbjct: 243 GINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNE 302

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
             P +V      S V QV+CG +HT  +  S+G++ ++G G            S GQLG 
Sbjct: 303 IVPRKVL-ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------SVGQLGT 349

Query: 387 GNDVDYIHPTIV 398
            + ++   P +V
Sbjct: 350 KSSINSNTPQLV 361



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 141/298 (47%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+G+LG     ++ + +     E   + ++ACG AH++ L E G +Y  G +  GQL
Sbjct: 79  GSNDFGQLGHDGCRTKLQKI--PGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL 136

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  + G   +P  +  L   + VQIS GY H  A+T  GELY WG N  GQLGLG    
Sbjct: 137 GLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPG 196

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V   PT V  L G+     A G   S  V+  G V  WG    G+LG   ++S+     
Sbjct: 197 NVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL----- 250

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P  +K +  VKVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 251 ----SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPR 306

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   +V CG  HT  L  S G +Y++G    G LG  S    ++P+ V GP
Sbjct: 307 KVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLGP 364



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 65/136 (47%), Gaps = 27/136 (19%)

Query: 291 EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG---PFSESPV-DQV 346
           + V CG  HT  +T  G+LY  GSN+ G LG       H   R +    P  ES V   V
Sbjct: 57  KSVACGNNHTLAVTEDGQLYACGSNDFGQLG-------HDGCRTKLQKIPGVESLVMTSV 109

Query: 347 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGEN 403
           +CG  H+ A++E G++ TWG              S GQLG   D  + Y  P IV    +
Sbjct: 110 ACGEAHSMALNEWGQLYTWG------------SDSCGQLGLETDEGIQY-KPKIVKTLAS 156

Query: 404 VKALQVSCGFNHTGAL 419
           +  +Q+SCG+ H  AL
Sbjct: 157 MLLVQISCGYKHCMAL 172


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LH  C+++                                
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG GS + L SP ++     E  ++  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 145/311 (46%), Gaps = 29/311 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV        V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   E  + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERVIE 288

Query: 409 V-SCGFNHTGA 418
           + +C   HT A
Sbjct: 289 IAACHSTHTSA 299



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GEL+ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|297792001|ref|XP_002863885.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297309720|gb|EFH40144.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 454

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 197/445 (44%), Gaps = 71/445 (15%)

Query: 25  GICKRWISSTL-QRRFAALWGNGDYGRLGLGSLE------SRWRPVVCSAFEKHSLKALA 77
           G+ +R  +ST  +RR    +G+G++G LGL S          + P V S      +  ++
Sbjct: 30  GLVRRQFTSTRGERRTVMSFGDGNHGALGLSSSSIPGMGMDAYEPTVVSNLPS-DISFIS 88

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHH 134
            G  H+L +T  G ++A G ND GQLG   +        EP R+ GL    V +   +  
Sbjct: 89  AGHYHSLAVTFGGEIWAWGRNDEGQLGRIAVDSGRDSRSEPKRVEGLDN--VNVRAAFAS 146

Query: 135 ---SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
              S+AI  DG L++WG++  GQLGLGK   +   +P++VE L+     + +LG+  ++A
Sbjct: 147 GVVSAAIGDDGSLWVWGRSKRGQLGLGKGIIEA-RVPSRVETLAAEHVVKVSLGWGHALA 205

Query: 192 VTGGGKVLSWGAGGSGRLGH---GQESSILGFLRSTS----------------------- 225
           +T  GKV  WG    GR+G+     E+S+L  +   S                       
Sbjct: 206 LTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKDQHAADLNLEAAEKKVVEAMS 265

Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                   + P L++E   VKV   A G  HS  +  +G +   G     ++   + +  
Sbjct: 266 KENDMPIAWEPCLVEETRNVKVADIACGSDHSLILCHDGTLLSSGSNIYGQLGRSKQDLG 325

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGE--LYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P  I++ P S  +  G  H+  + +  E  + +WG N +  LG G  +  H P  V+G
Sbjct: 326 MTPVDITESPIS--IAAGLGHSLAICNRDERKILSWGWNRSRQLGRGKPE--HLPREVEG 381

Query: 337 PFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
              ESP   VS G  H+  ++E G+   WG G              G+LG G+  D   P
Sbjct: 382 FDGESPA-SVSAGRVHSLCVTEKGEAWVWGCG------------KNGRLGLGSSSDEPEP 428

Query: 396 TIVNFGENVKALQVSCGFNHTGALL 420
            ++   E    LQ   GF+H+  L+
Sbjct: 429 MLLEDIEGC-VLQTVAGFDHSLILV 452


>gi|390348536|ref|XP_781445.2| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Strongylocentrotus purpuratus]
          Length = 539

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 47/370 (12%)

Query: 39  FAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           FA L WG   YG+LGLG  +    P     F +  +K +  GG HT+FLT  G ++  G 
Sbjct: 149 FAYLAWGANSYGQLGLGHQKDHLLPENLKTFPE-DVKTIVGGGGHTVFLTGNGDLHVCGS 207

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           N+ GQLG+      + + +R+  L+  + +I+ G++H+ AIT + EL  WG N++GQL  
Sbjct: 208 NNKGQLGLGHTSDIN-KLVRVPDLRP-LKKIACGWNHTVAITENDELLCWGSNTHGQL-- 263

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAAL---GFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                 ++  P ++E LSG+   + A    G   ++AV+  G++ +WGAG  G+LG    
Sbjct: 264 -THKESIVTKPRQIE-LSGVDCPRFAAISGGLRHTLAVSTDGQLWTWGAGKKGQLGWTDS 321

Query: 215 SSILGFLRSTSEYTPRLIKELE-GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
              +    +   + P  +KE +  VK    AAG  HSA + + G +YI+G     ++   
Sbjct: 322 KMRVPHQWNKPVHIP--VKEDDVDVKFVQVAAGAYHSAALSDMGILYIWGCNKWSQLAQP 379

Query: 274 EGNH----ARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG------ 321
           + ++     +R  P+L   L   + +  G  H   +T    +YTWG N+ G LG      
Sbjct: 380 KSSNPISTPKRLDPALFDGLTI-KGIHSGWTHMLAITEDESVYTWGRNDYGQLGRPAAKS 438

Query: 322 ---------------IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
                            + D  H P  +          Q+ CG +H+ AI+ + K+L WG
Sbjct: 439 IPNGSAESESNATPTTTTPDCCHVPTEIS---ILKNAKQIVCGAEHSLAITKDDKLLAWG 495

Query: 366 WGGSHGTFSE 375
           W   HG  ++
Sbjct: 496 W-NEHGMCAD 504



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 168/372 (45%), Gaps = 62/372 (16%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
           G +TLF        A G N +GQLG+     + L P  +    ++V  I  G  H+  +T
Sbjct: 144 GVYTLF-----AYLAWGANSYGQLGLGHQKDHLL-PENLKTFPEDVKTIVGGGGHTVFLT 197

Query: 140 VDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
            +G+L++ G N+ GQLGLG  +   K++ +P           K+ A G+  +VA+T   +
Sbjct: 198 GNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP------LKKIACGWNHTVAITENDE 251

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA---GFLHSACID 254
           +L WG+   G+L H +ES +           PR I EL GV     AA   G  H+  + 
Sbjct: 252 LLCWGSNTHGQLTH-KESIV---------TKPRQI-ELSGVDCPRFAAISGGLRHTLAVS 300

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEE--------VVCGGYHTCVL 303
            +G+++ +G     ++ + + +  R P   +K   +P  E+        V  G YH+  L
Sbjct: 301 TDGQLWTWGAGKKGQLGWTD-SKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAAL 359

Query: 304 TSGGELYTWGSNENGCLG-IGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISEGK- 360
           +  G LY WG N+   L    S + + +P+R+    F    +  +  GW H  AI+E + 
Sbjct: 360 SDMGILYIWGCNKWSQLAQPKSSNPISTPKRLDPALFDGLTIKGIHSGWTHMLAITEDES 419

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGN------------DVDYIH-PTIVNFGENVKAL 407
           + TWG       + + G  +   + +G+              D  H PT ++  +N K  
Sbjct: 420 VYTWG----RNDYGQLGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKNAK-- 473

Query: 408 QVSCGFNHTGAL 419
           Q+ CG  H+ A+
Sbjct: 474 QIVCGAEHSLAI 485



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 94/368 (25%), Positives = 161/368 (43%), Gaps = 51/368 (13%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
            +K +  GG HT+FLT  G ++  G N+ GQLG+      + + +R+  L+  + QI  G
Sbjct: 23  DVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDIN-KLVRVPDLRP-LKQIVCG 80

Query: 132 YHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPT-------KVECLSGIFTKQAA 183
           ++H+ AIT  DG L +  +    ++G      ++IP+P         V    G  + ++ 
Sbjct: 81  WNHTVAITGTDGSLELLHRGQFNEVG-----RELIPVPECSWEETLPVAVRVGAGSHESC 135

Query: 184 LGFEQSV-AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVK 241
           +G    +  V      L+WGA   G+LG G +   L          P  +K   E VK  
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHL---------LPENLKTFPEDVKTI 186

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           +   G  H+  +  NG +++ G     ++     +   +   +  L   +++ CG  HT 
Sbjct: 187 VGGGG--HTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRPLKKIACGWNHTV 244

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-EG 359
            +T   EL  WGSN +G L      ++  P +++    + P    +S G +HT A+S +G
Sbjct: 245 AITENDELLCWGSNTHGQL-THKESIVTKPRQIELSGVDCPRFAAISGGLRHTLAVSTDG 303

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--------DYIHPTIVNFGENVKALQVSC 411
           ++ TWG G              GQLG  +            +H  +     +VK +QV+ 
Sbjct: 304 QLWTWGAG------------KKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAA 351

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 352 GAYHSAAL 359



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 125/273 (45%), Gaps = 37/273 (13%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIPIPTKVEC 173
           LRIS   ++V  I  G  H+  +T +G+L++ G N+ GQLGLG  +   K++ +P     
Sbjct: 15  LRISNFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVPDLRP- 73

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLI 232
                 KQ   G+  +VA+T        G  GS  L H GQ + +   L    E +    
Sbjct: 74  -----LKQIVCGWNHTVAIT--------GTDGSLELLHRGQFNEVGRELIPVPECS---W 117

Query: 233 KELEGVKVKIAAAGFLHSACIDE----NGRVYIF-----GDRAVDKMLFQEGNHARRPSL 283
           +E   V V++ A    H +C+      NG   +F     G  +  ++          P  
Sbjct: 118 EETLPVAVRVGAGS--HESCVGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPEN 175

Query: 284 ISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           +   P   + +V GG HT  LT  G+L+  GSN  G LG+G    ++   RV       P
Sbjct: 176 LKTFPEDVKTIVGGGGHTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVRVP---DLRP 232

Query: 343 VDQVSCGWKHTAAISEG-KILTWGWGGSHGTFS 374
           + +++CGW HT AI+E  ++L WG   +HG  +
Sbjct: 233 LKKIACGWNHTVAITENDELLCWG-SNTHGQLT 264



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)

Query: 43  WGNGDYGRLGLGSLESR----W-RPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYA 94
           WG G  G+LG    + R    W +PV     E         +A G  H+  L++ G +Y 
Sbjct: 308 WGAGKKGQLGWTDSKMRVPHQWNKPVHIPVKEDDVDVKFVQVAAGAYHSAALSDMGILYI 367

Query: 95  TGLNDFGQLGISEN-----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            G N + QL   ++         L+P    GL   +  I +G+ H  AIT D  +Y WG+
Sbjct: 368 WGCNKWSQLAQPKSSNPISTPKRLDPALFDGLT--IKGIHSGWTHMLAITEDESVYTWGR 425

Query: 150 NSNGQLGLGKKAAKVIP---------------------IPTKVECLSGIFTKQAALGFEQ 188
           N  GQ  LG+ AAK IP                     +PT++  L     KQ   G E 
Sbjct: 426 NDYGQ--LGRPAAKSIPNGSAESESNATPTTTTPDCCHVPTEISILKN--AKQIVCGAEH 481

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
           S+A+T   K+L+WG    G    G ++++         + P+ ++ L+G
Sbjct: 482 SLAITKDDKLLAWGWNEHGMCADGTKTNV---------FLPKQVQGLDG 521



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 101/248 (40%), Gaps = 46/248 (18%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG- 246
            +V +TG G +   G+   G+LG G  S I   +R   +  P L + + G    +A  G 
Sbjct: 33  HTVFLTGNGDLHVCGSNNKGQLGLGHTSDINKLVR-VPDLRP-LKQIVCGWNHTVAITGT 90

Query: 247 -----FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
                 LH    +E GR  I     V +  ++E            LP +  V  G + +C
Sbjct: 91  DGSLELLHRGQFNEVGRELI----PVPECSWEE-----------TLPVAVRVGAGSHESC 135

Query: 302 VLTSG--GELYT------WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
           V  +     +YT      WG+N  G LG+G       PE ++  F E  V  +  G  HT
Sbjct: 136 VGVADVLNGVYTLFAYLAWGANSYGQLGLGHQKDHLLPENLK-TFPED-VKTIVGGGGHT 193

Query: 354 AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
             ++            +G     G ++ GQLG G+  D     +V   +     +++CG+
Sbjct: 194 VFLT-----------GNGDLHVCGSNNKGQLGLGHTSDI--NKLVRVPDLRPLKKIACGW 240

Query: 414 NHTGALLE 421
           NHT A+ E
Sbjct: 241 NHTVAITE 248


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 86  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 145

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 146 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 203

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 254

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LH  C+++                                
Sbjct: 255 TP----------VRVAA---LHGMCVNQ-------------------------------- 269

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG GS + L SP ++     E  ++  +
Sbjct: 270 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 323

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 324 CHSTHTSAAKTQGGHVYMWG 343



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 131 WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 190

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 191 QVG-SGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 249

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 250 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 308 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 343



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 65  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 115

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 116 GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 175

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GEL+ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 176 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY 235

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ HT AL +
Sbjct: 236 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 282



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 237 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 296

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 297 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 348

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 349 -SVILPHLTHFCCTDDVF 365


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2963 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3022

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3023 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3081

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3082 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3133 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3192

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3193 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3239

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3240 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3276



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4019

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 4020 RLGIGGTESVSTPTLLESVQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4077

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  VE L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 4078 GNRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4131

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4132 -----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4186

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 4187 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4246

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    +E G++ TW            G +  GQLG G     
Sbjct: 4247 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 4293

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 4294 QRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3001 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3060

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3061 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3118

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3119 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3169

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3170 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3229

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3230 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3284

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3285 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 3019 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3077

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3078 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG 3136

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3137 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3191

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3192 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3245

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3246 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3305

Query: 335  QGPFSESPVDQVSCGWKHTAA 355
            QG      + +V+CG  H+ A
Sbjct: 3306 QG-LEGQKITRVACGSSHSVA 3325



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    +VIP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4027 ESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4085

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  +  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4086 PRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4143

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4194

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4195 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4254

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4255 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4313

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4314 SAHTLAWSTSKPTSTG 4329



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 150/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+ +G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDALAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEVIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3073 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3132

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3133 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3190

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3191 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3247

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3248 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3296

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3297 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 25/231 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSN 152
            ++G+L  G SE+    + P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    
Sbjct: 579 GNYGRLGHGSSED---EVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G+LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG
Sbjct: 636 GKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 693

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            E  +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 694 TEEHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 134/297 (45%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3013 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3064

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3065 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3124

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3125 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3180

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3181 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3222



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4014

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4015 YGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4075 LGHGNRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4126 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4186 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4232

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G    AC       +  +GRVY   +   A+   L Q G  +R  ++I    +S+ 
Sbjct: 449 LASLGVTQIACAEKRFLILSRSGRVYTQAYNSDALAPQLVQ-GLASR--NIIKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D + P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEVIPVLVAGLKGLKVID 608

Query: 409 VSCG 412
           V+CG
Sbjct: 609 VACG 612


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 554 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 613

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
           NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 614 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 672

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 673 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
           +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 724 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 783

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
           +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 784 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 830

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 831 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 867



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 1550 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1607

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 1608 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 1665

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 1666 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1720

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 1721 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 1775 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1834

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 1835 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1881

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 1882 IQRPRLVAALQGKKVNRVACGSAHTLA 1908



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79  GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
           GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 592 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 651

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 652 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 709

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
            G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 710 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 760

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 761 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 820

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
           TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 821 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 875

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 876 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 1616 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 1674

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 1675 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1732

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 1733 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1783

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 1784 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1843

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 1844 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1902

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 1903 SAHTLAWSTSKPASAG 1918



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 150/328 (45%), Gaps = 21/328 (6%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
           G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 610 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 669

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 670 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 728

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 729 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 782

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 783 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 837

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 838 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 897

Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILT 363
           G      + +V+CG  H+ A +   + T
Sbjct: 898 G-LEGQKITRVACGSSHSVAWTTVDVAT 924



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 664 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 723

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
           LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 724 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 781

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 782 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 838

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 839 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 887

Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 888 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 919



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 546 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 603

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
           GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 655

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
             +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 656 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 715

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
           WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 716 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 771

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
             G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 772 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 813



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 1545 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1603

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 1604 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 1663

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 1664 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1714

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 1715 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1774

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 1775 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 1821

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1822 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1853


>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
          Length = 854

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 178/375 (47%), Gaps = 44/375 (11%)

Query: 58  SRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEP 115
           SR+   V S F   +  + +++CG  H+  + ++G ++  G ND+GQLG+      S +P
Sbjct: 84  SRFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHIS-KP 142

Query: 116 LRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA---AKVIPIPTKV 171
             +  LK E V  ++ G  H+   TV  +++  G +  GQLG G  A   +   P+    
Sbjct: 143 SCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEGQLGRGISAIGDSTSTPVLIYD 202

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
              +G    Q   G   S+A+T  G V +WG+   G+LG    S ++   + T  + P  
Sbjct: 203 SGPTGSKIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVN--KPTKVHIPEP 260

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKL 287
           +K +          G+ HS  + ENG VY+ G+    K+     F      ++  L + +
Sbjct: 261 VKRI--------NTGYYHSIFLTENGLVYVCGESESGKLGIDINFSTQIMPKQMQLPNPV 312

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERV-QGPFSESPVDQ 345
            Y   V CGG+HT  LT    LY  GSN +G LG+G+ +  LH+P+ + QG      + +
Sbjct: 313 IY---VACGGHHTMFLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISR 369

Query: 346 VSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENV 404
           +SCG  HTA ++E GK+ T G  G H           G+LG   + + +H   + F +  
Sbjct: 370 ISCGESHTAILTESGKLYTCG-DGRH-----------GKLGLEENENNVHE--LTFVQRY 415

Query: 405 KAL---QVSCGFNHT 416
           K L    +SCG  HT
Sbjct: 416 KQLFISNISCGGCHT 430



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 158/332 (47%), Gaps = 37/332 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLG      +P      +   +  +ACG AHTL  T    ++A G +  G
Sbjct: 122 VFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHTLICTVAEKIFACGSDQEG 181

Query: 102 QLG--ISENIGYSLE-PLRI-----SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           QLG  IS  IG S   P+ I     +G K  +VQI  G HHS A+T DG ++ WG N  G
Sbjct: 182 QLGRGISA-IGDSTSTPVLIYDSGPTGSK--IVQIVAGSHHSLALTSDGNVFAWGSNLEG 238

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGL   +  ++  PTKV     +  K+   G+  S+ +T  G V   G   SG+LG   
Sbjct: 239 QLGLPDISG-LVNKPTKVHIPEPV--KRINTGYYHSIFLTENGLVYVCGESESGKLGID- 294

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
               + F   +++  P+ + +L    + +A  G  H+  + EN  +Y  G  +  ++ L 
Sbjct: 295 ----INF---STQIMPKQM-QLPNPVIYVACGGH-HTMFLTENNNLYCTGSNSSGQLGLG 345

Query: 273 QEGNHARRPSLISKLPYSEE----VVCGGYHTCVLTSGGELYTWGSNENGCLGI----GS 324
                   P L+S+     E    + CG  HT +LT  G+LYT G   +G LG+     +
Sbjct: 346 TNVTELHTPKLLSQGALKNERISRISCGESHTAILTESGKLYTCGDGRHGKLGLEENENN 405

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           +  L   +R +  F    +  +SCG  HT  I
Sbjct: 406 VHELTFVQRYKQLF----ISNISCGGCHTILI 433



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 33/306 (10%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           V+ IS G  HS+ I   G L+++G N  GQLGLG K    I  P+ V+ L        A 
Sbjct: 101 VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNH--ISKPSCVKVLKPEKVTHVAC 158

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKI 242
           G   ++  T   K+ + G+   G+LG G    I     STS  TP LI +    G K+  
Sbjct: 159 GRAHTLICTVAEKIFACGSDQEGQLGRG----ISAIGDSTS--TPVLIYDSGPTGSKIVQ 212

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             AG  HS  +  +G V+ +G     ++ L        +P+ +      + +  G YH+ 
Sbjct: 213 IVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKRINTGYYHSI 272

Query: 302 VLTSGGELYTWGSNENGCLGIG---SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
            LT  G +Y  G +E+G LGI    S  ++  P+++Q P   +PV  V+CG  HT  ++E
Sbjct: 273 FLTENGLVYVCGESESGKLGIDINFSTQIM--PKQMQLP---NPVIYVACGGHHTMFLTE 327

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFG--ENVKALQVSCGFNH 415
              L              G +S GQLG G +V  +H P +++ G  +N +  ++SCG +H
Sbjct: 328 NNNLYCT-----------GSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGESH 376

Query: 416 TGALLE 421
           T  L E
Sbjct: 377 TAILTE 382


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN +G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 115/251 (45%), Gaps = 34/251 (13%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
           QAA G   S+ +    +VLS G    G+LG  G +   L          P  I+ LE + 
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLT 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVV 294
           V + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V 
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVS 134

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ QV+ G  H+
Sbjct: 135 CGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHS 193

Query: 354 AAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVS 410
            A+S     ++GWG           +S GQL   G    V    P  V   +N+  + +S
Sbjct: 194 FALSLCGT-SFGWGS----------NSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYIS 242

Query: 411 CGFNHTGALLE 421
           CG  HT  L +
Sbjct: 243 CGDAHTAVLTQ 253



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 168/365 (46%), Gaps = 29/365 (7%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG+  +G+LGLG +E      P         +++ +ACG  HTLFLT TG VYA G ND+
Sbjct: 10  WGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDY 69

Query: 101 GQLGISENIGYS-LEP-LRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            QLG         + P L I  L+  V +QI  G  HS A++  G++  WG N  GQLG 
Sbjct: 70  SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCGQLGH 129

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
                +++ +P  V  L      Q A G   S+A+T  G++ SWG+   G+LG    + +
Sbjct: 130 ATD-KEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDL 188

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 T    P  +  L G+ +   A G  HS  I ++G V+ +G     ++   +  +
Sbjct: 189 ------THCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242

Query: 278 ARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
              P+ +  L       V CG   +  LT+ G ++T G+   G LG G       P R+ 
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP-RMV 301

Query: 336 GPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                S + QV+CG +HT A+  S G++  +G G            S GQLG  +    +
Sbjct: 302 MELMGSTITQVACGNRHTLALVPSRGRVYAFGLG------------SSGQLGTRSTKSLM 349

Query: 394 HPTIV 398
            P +V
Sbjct: 350 LPQVV 354



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 132/283 (46%), Gaps = 38/283 (13%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ELY WG  S+GQLGLG    + I  P+++        +Q A G   ++ +T  GKV + G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 203 AGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +    +LGH    +   +  FL         LI EL+   +     G  HS  + + G+V
Sbjct: 66  SNDYSQLGHDLPTKRPRMSPFL---------LIPELQDYVIIQICCGSRHSLALSDWGQV 116

Query: 260 YIFGDR-------AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
             +GD        A DK + Q     R+  L++K     ++ CG  H+  LTS GELY+W
Sbjct: 117 LSWGDNDCGQLGHATDKEIVQLPKVVRQ--LVTKTVV--QIACGNNHSLALTSCGELYSW 172

Query: 313 GSNENGCLGIGSI-DVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
           GSN  G LG+ S  D+ H   P R+       P+  ++CG  H+  IS+   + +GW   
Sbjct: 173 GSNIYGQLGVNSPNDLTHCNYPLRLTTLLG-IPLAAIACGGNHSFLISKSGAV-FGW--- 227

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                  G ++ GQLG  ++ +  +PT +     +    V+CG
Sbjct: 228 -------GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACG 263



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 18/152 (11%)

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLG--IGSIDVLH 329
           E      PS I   P +  ++V CG  HT  LT+ G++Y  GSN+   LG  + +     
Sbjct: 24  EDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGHDLPTKRPRM 83

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
           SP  +     +  + Q+ CG +H+ A+S+ G++L+WG             +  GQLGH  
Sbjct: 84  SPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG------------DNDCGQLGHAT 131

Query: 389 DVDYIH-PTIVNFGENVKALQVSCGFNHTGAL 419
           D + +  P +V        +Q++CG NH+ AL
Sbjct: 132 DKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 36/334 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG- 101
           WG G  G+LG         P +  + +   +K +ACG   T  LT++G ++  G N +G 
Sbjct: 329 WGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGG 388

Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L   E  G    P +ISG      +  ++ G  H++A++  G+L+ +G  + G LG G 
Sbjct: 389 NLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGN 448

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG-----------GGKVLSWGAGGSGR 208
              + +  P +VE L G++ K  A G   + A+             GGK+ +WG G  GR
Sbjct: 449 --LQSVSHPKEVESLKGLWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGR 506

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGH      L          P  + +L        + G + +  +   G++Y  G     
Sbjct: 507 LGHADLEKKL---------QPTCVAQLVEHDFVQVSCGRMLTVALTRTGKIYTMGSSVHG 557

Query: 269 KMLFQEGNHARRPSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN   +   I+      K  + +E+  G YH   LTSGG +YTWG   NG LG+
Sbjct: 558 QL----GNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGL 613

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G+++  + P  V+    +  V  ++CG   TAAI
Sbjct: 614 GNVEDRNVPTLVEA-LRDRQVQSIACGSNLTAAI 646



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 174/364 (47%), Gaps = 39/364 (10%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-IST 130
            ++ ++ G  H   +T+ G V+  G    G+LG   ++  S  P  +  L   +V+ ++ 
Sbjct: 306 DVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVS-SPTIVESLDGFLVKFVAC 364

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           G + + A+T  GEL++WG+N  G   + ++      +P ++   L+G+     A G   +
Sbjct: 365 GEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGDWHT 424

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            AV+  G++ ++G G  G LGHG        L+S S   P+ ++ L+G+ VK  A G  H
Sbjct: 425 AAVSSSGQLFTYGDGTFGVLGHGN-------LQSVSH--PKEVESLKGLWVKSVACGSWH 475

Query: 250 SACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
           +A I +            G+++ +GD    ++   +     +P+ +++L   +  +V CG
Sbjct: 476 TAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCG 535

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              T  LT  G++YT GS+ +G LG        S   V+G   E  V ++S G  H AA+
Sbjct: 536 RMLTVALTRTGKIYTMGSSVHGQLGNPQAKN-KSIAIVEGKLKEEFVKEISSGSYHVAAL 594

Query: 357 SEG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + G  + TWG G            + GQLG GN  D   PT+V    + +   ++CG N 
Sbjct: 595 TSGGSVYTWGKG------------TNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNL 642

Query: 416 TGAL 419
           T A+
Sbjct: 643 TAAI 646



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 17/259 (6%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +  +  +LG   +  +T  G+V  WG G  G+LGH  +  +         
Sbjct: 295 LPKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDV--------- 345

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
            +P +++ L+G  VK  A G   +  + ++G ++++G+      L  E     +  P  I
Sbjct: 346 SSPTIVESLDGFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQI 405

Query: 285 SKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           S  P +      V CG +HT  ++S G+L+T+G    G LG G++  +  P+ V+     
Sbjct: 406 SG-PLAGVSISNVACGDWHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVES-LKG 463

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
             V  V+CG  HTAAI +     + + G  G     G    G+LGH +    + PT V  
Sbjct: 464 LWVKSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQ 523

Query: 401 GENVKALQVSCGFNHTGAL 419
                 +QVSCG   T AL
Sbjct: 524 LVEHDFVQVSCGRMLTVAL 542



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 98/202 (48%), Gaps = 21/202 (10%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+L++    + V+  + G  H+A I + G V+ +G+ +  K+  +       P+++  L 
Sbjct: 296 PKLLEPTVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLD 355

Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSNENG----CLGIGSIDVLHSPERVQGPFSESP 342
               + V CG Y TC LT  GEL+ WG N+ G    C        L  P ++ GP +   
Sbjct: 356 GFLVKFVACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWL--PRQISGPLAGVS 413

Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           +  V+CG  HTAA+S  G++ T+G     GTF        G LGHGN     HP  V   
Sbjct: 414 ISNVACGDWHTAAVSSSGQLFTYG----DGTF--------GVLGHGNLQSVSHPKEVESL 461

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
           + +    V+CG  HT A+++ +
Sbjct: 462 KGLWVKSVACGSWHTAAIVDVI 483


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LH  C+++                               
Sbjct: 223 -TP----------VRVAA---LHGVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG GS + L SP ++     E  ++  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K+VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G ++K  + G 
Sbjct: 33  EAIYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKRIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLPYSE--EVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  + + L   +  EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GEL+ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V     V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTD 250



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
          Length = 835

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 174/370 (47%), Gaps = 53/370 (14%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQI 128
            L  L+CG  H   +    C+Y  G++  G LG+   +  S  P  +     LK +V+ +
Sbjct: 359 DLHHLSCGFEHAA-VVRNSCLYTMGVSSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSV 417

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  H+ A+T D  +Y WG N+ GQLGLG    +  P P  +  L+     Q + G   
Sbjct: 418 SCGRKHTLALT-DYGVYAWGSNTYGQLGLGPLIQES-PYPQIITNLAFKKMVQVSAGQYH 475

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           ++A++  G+V +WG G  G+LGHG   +I         Y P+L+      KV   AAG  
Sbjct: 476 TIALSSSGEVYTWGWGIHGQLGHGDCDNI---------YYPKLLPFQH--KVVQVAAGHA 524

Query: 249 HSACIDENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLP--YS--EEVVCGGYHTCV 302
           HS  +   G+++ FG     ++ +   + N + RP LI  +P  Y+  E++  G +H   
Sbjct: 525 HSLILTREGKLFGFGSNVFGQLEYCQLDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIA 584

Query: 303 LTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGPF------SESPVDQVSCG 349
           + +  E+YTWG++      + S ++       L  P+  +         ++ P++QV  G
Sbjct: 585 VRADQEVYTWGASPQEVRILQSKNLQKQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVG 644

Query: 350 WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           ++H+  +  GK+L   WG      ++D   S  +L   +++ +       F    K + V
Sbjct: 645 YRHSVILHNGKLL---WGK-----NKDDELSPPKLNDKDNISF-------FAH--KFIHV 687

Query: 410 SCGFNHTGAL 419
           SCG ++T A+
Sbjct: 688 SCGLDYTMAI 697



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 161/344 (46%), Gaps = 50/344 (14%)

Query: 49  GRLGLGSLESRWRP--VVCSAFE-KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           G LGLG L ++  P  +V + F+ K  + +++CG  HTL LT+ G VYA G N +GQLG+
Sbjct: 387 GCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDYG-VYAWGSNTYGQLGL 445

Query: 106 SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK----K 160
              I  S  P  I+ L  K++VQ+S G +H+ A++  GE+Y WG   +GQLG G      
Sbjct: 446 GPLIQESPYPQIITNLAFKKMVQVSAGQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIY 505

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             K++P   KV         Q A G   S+ +T  GK+  +G+   G+L + Q       
Sbjct: 506 YPKLLPFQHKVV--------QVAAGHAHSLILTREGKLFGFGSNVFGQLEYCQ------- 550

Query: 221 LRSTSEYTPRLIKELEGVKVKI--AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
           L S     P LI  +  +   I   A G+ H+  +  +  VY +G    +  + Q  N  
Sbjct: 551 LDSNKSTRPVLILIMPDIYTPIEKIATGYFHNIAVRADQEVYTWGASPQEVRILQSKNLQ 610

Query: 279 RRPSLISKLPYS----------------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++  L  K P S                E+VV G  H+ +L +G  L  WG N++  L  
Sbjct: 611 KQNGLSLKGPDSWKASVHIYSGGNKKPIEQVVVGYRHSVILHNGKLL--WGKNKDDELSP 668

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             ++     ++    F       VSCG  +T AI   GK+L WG
Sbjct: 669 PKLN-----DKDNISFFAHKFIHVSCGLDYTMAIDHAGKLLAWG 707



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 49/119 (41%), Gaps = 24/119 (20%)

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV------SCGWKHTAAISEGKILTWGW 366
           G  +     I  +D +  PE    P  E+ +D++      SCG++H A +    + T G 
Sbjct: 327 GKTDKDEYNIHLLDFMDPPE---PPIEETLIDKMPDLHHLSCGFEHAAVVRNSCLYTMGV 383

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN---FGENVKALQVSCGFNHTGALLEY 422
                       SS G LG G  +    P  +    F   VK L VSCG  HT AL +Y
Sbjct: 384 ------------SSSGCLGLGPLLTQSSPPKLVQTLFDLKVKVLSVSCGRKHTLALTDY 430


>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 380

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 175/404 (43%), Gaps = 59/404 (14%)

Query: 44  GNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           G   YG+LG G +E R  P +C  +  +  +++ +A GG HT  +T  G V+  G N  G
Sbjct: 1   GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG+      S    R   L   V  ++ G+  +  +T  G +   G N+ GQLG+G+K 
Sbjct: 61  QLGLGHLADISAL-QRCPSLTHTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKP 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG----GSGRLGHGQESSI 217
                +   VE L       AA G   ++AVT  G+V  WG G        LG    SS+
Sbjct: 120 NFTAEVQV-VESLKAAVVSVAA-GLRHALAVTDSGRVYQWGRGLLSQAKRTLG---PSSV 174

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
              L ST    P  +  L+    ++  AG +H  C+ E+G ++++G     +++      
Sbjct: 175 PPHLGST---VPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLV------ 225

Query: 278 ARRPSLISKLPYSEEVV---------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
           +R P L S +P    ++          G  H    T  G ++TWG    G LG  +    
Sbjct: 226 SRDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPA-PTS 284

Query: 329 HSPER---VQGPFSES--PVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
            SPE      G   E+  P +        Q++CG +H  AI  G++L+WGW         
Sbjct: 285 RSPESRSTTDGANLEAGLPAEVKALQGATQIACGSEHNLAILAGRLLSWGW--------- 335

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              +  G  G G+  D   P +V     ++ L + CG  H+ A+
Sbjct: 336 ---NEHGMCGDGSHTDVRQPQLV---PALRPLLIGCGAGHSMAV 373



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 159/343 (46%), Gaps = 35/343 (10%)

Query: 96  GLNDFGQLGISENIGYSLEPL-RISGLKKEVVQI-STGYHHSSAITVDGELYMWGKNSNG 153
           G N +GQLG  +    S   L   + LK   V++ + G  H++ IT DGE+++ G+N  G
Sbjct: 1   GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           QLGLG  A     I     C S   T      G++ ++ +T  G+VLS G+   G+LG G
Sbjct: 61  QLGLGHLAD----ISALQRCPSLTHTVTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIG 116

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
           Q+ +       T+E   ++++ L+   V + AAG  H+  + ++GRVY +G   + +   
Sbjct: 117 QKPNF------TAEV--QVVESLKAAVVSV-AAGLRHALAVTDSGRVYQWGRGLLSQAKR 167

Query: 273 QEGNHARRPSLISKLP---------YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             G  +  P L S +P          S  V  G  H   LT  G+L+ WGSN++G L + 
Sbjct: 168 TLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQL-VS 226

Query: 324 SIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS- 380
               L S   V+        V  V  GW H  A +E G++ TWG  G++G       +S 
Sbjct: 227 RDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGR-GNYGQLGRPAPTSR 285

Query: 381 ---GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                    G +++   P  V   +   A Q++CG  H  A+L
Sbjct: 286 SPESRSTTDGANLEAGLPAEVKALQG--ATQIACGSEHNLAIL 326


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2599 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2658

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2659 NGRLGLGLSSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2717

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2718 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2769 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2828

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2829 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2875

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2876 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2912



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3595 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3652

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3653 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3710

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3711 HGSRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3765

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3766 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P+ I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3820 SDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3879

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 3880 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3926

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 3927 IQRPRLVAALQGKKVNRVACGSAHTLA 3953



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   +V+   + +G  H
Sbjct: 2637 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRH 2696

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2697 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2754

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2755 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2805

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2806 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2865

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2866 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2920

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2921 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 2655 GEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGD 2713

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G
Sbjct: 2714 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 2772

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 2773 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 2827

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 2828 ------SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 2881

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 2882 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLV 2941

Query: 335  QGPFSESPVDQVSCGWKHTAA 355
            QG      + +V+CG  H+ A
Sbjct: 2942 QG-LEGQKITRVACGSSHSVA 2961



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKAISAFSGKQAGKHVVHIACGSTY 251

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 252 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 309

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 310 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 360

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 361 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 420

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 421 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 465



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG          
Sbjct: 3661 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 3719

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3720 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3777

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPTK 3828

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3829 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3888

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3889 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3947

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 3948 SAHTLAWSTSKPTSAG 3963



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 150/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+ +G VY    N             +L P  + GL
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYN-----------SDTLAPQLVQGL 179

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 180 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKAISAFSG 235

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 236 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 283

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 402

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 403 VAAGSTHCLALTEDSEVHSWG 423



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2709 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2768

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2769 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2826

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2827 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2883

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2884 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2932

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2933 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2964



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P   SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 208 WGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 266

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 267 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 326 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 383

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 384 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 423



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2591 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2648

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 2649 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYMVKKVAVHSGGRHATAL 2700

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2701 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2760

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2761 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2816

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2817 -DGDF--------GKLGRGGSEG------CNVPQNIERLNGQGVCQIECGAQFSLAL 2858



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
            G +Y WG N  GQLG G + AKV +P                                  
Sbjct: 3590 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3648

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3649 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3708

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3709 LGHGSRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3759

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3760 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3819

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3820 SDGCKVPTKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3866

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3867 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3898



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 264 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 323

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 324 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 382

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 383 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 425



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P+ I    G +    V   A 
Sbjct: 197 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKAISAFSGKQAGKHVVHIAC 247

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 248 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 307

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 308 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 366

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 367 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 414

Query: 421 E 421
           E
Sbjct: 415 E 415



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 318 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 377

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 378 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 429



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 193 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYS 252

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 253 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 300


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 173/368 (47%), Gaps = 48/368 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STG 131
           ++ +ACGG H   +T+ G V+  G    G+LG   +   S  P  +  L     ++ + G
Sbjct: 311 VQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVACG 369

Query: 132 YHHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
            +H  A+T+ G+LY WG   +S G LG G   +  IP   +V   L  +     A G   
Sbjct: 370 EYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIP--KRVNGPLEEVRVASIACGPWH 427

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  VT  G++ ++G G  G LGH    S          Y+PR ++ L+G++   AA G  
Sbjct: 428 TAVVTTAGQLFTFGDGTFGVLGHNDRQSA---------YSPREVESLKGLRTVRAACGVW 478

Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS--EE 292
           H+A + E            +G+++ +GD   DK     G+  +R  P+ ++ L      +
Sbjct: 479 HTAAVVEVMVGSSSASSCSSGKLFTWGDG--DKGRLGHGDKEQRLVPTCVAALVDHNFRK 536

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V CG   T  LT+ GE++T GS+  G LG    D    P  V+G   ++ V+ ++CG  H
Sbjct: 537 VACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADG-KLPGMVEGRLVDAYVEDIACGAHH 595

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            A ++ + ++ TWG G +            G+LGHG+  D   PT+V   +  +   ++C
Sbjct: 596 VACVTLKSEVYTWGKGAN------------GRLGHGDQEDRNTPTLVEALKEKQVKSIAC 643

Query: 412 GFNHTGAL 419
           G   T A+
Sbjct: 644 GATFTAAV 651



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 147/340 (43%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    + + +ACG  H   +T +G +Y    G +  
Sbjct: 333 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSL 392

Query: 101 GQLGISENIGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P R++G  +EV    I+ G  H++ +T  G+L+ +G  + G LG  
Sbjct: 393 GLLGHGNDISHWI-PKRVNGPLEEVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHN 451

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            + +   P   +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 452 DRQSAYSP--REVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDK 509

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L     +  A G   +  +   G V+  G   
Sbjct: 510 GRLGHGDKEQRL---------VPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGS-- 558

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              M  Q G+    P    KLP          Y E++ CG +H   +T   E+YTWG   
Sbjct: 559 --SMFGQLGD----PQADGKLPGMVEGRLVDAYVEDIACGAHHVACVTLKSEVYTWGKGA 612

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G  +  ++P  V+    E  V  ++CG   TAA+
Sbjct: 613 NGRLGHGDQEDRNTPTLVEA-LKEKQVKSIACGATFTAAV 651



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 136/316 (43%), Gaps = 53/316 (16%)

Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           G HH+ A+   G++YMWG+            ++G G       P+P  +E    +  +  
Sbjct: 258 GSHHAEAL---GDVYMWGEGVGDGILGGGSVRIGAGGAMNLDAPLPKALESAIVLDVQYV 314

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + +  VT  G+V +WG    GRLGHG +  +           P+L++ L     ++
Sbjct: 315 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 365

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE----EVVCG 296
            A G  H   +  +G +Y +GD      L   GN      P  ++  P  E     + CG
Sbjct: 366 VACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNG-PLEEVRVASIACG 424

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            +HT V+T+ G+L+T+G    G LG       +SP  V+       V + +CG  HTAA+
Sbjct: 425 PWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTV-RAACGVWHTAAV 483

Query: 357 SE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            E             GK+ TWG G              G+LGHG+    + PT V    +
Sbjct: 484 VEVMVGSSSASSCSSGKLFTWGDGDK------------GRLGHGDKEQRLVPTCVAALVD 531

Query: 404 VKALQVSCGFNHTGAL 419
               +V+CG + T AL
Sbjct: 532 HNFRKVACGHSLTVAL 547



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G  H+A + + G V+ +G+ +  ++          P L+  L 
Sbjct: 300 PKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 359

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  E V CG YH C +T  G+LYTWG   +  G LG G+ D+ H  P+RV GP  E  V
Sbjct: 360 SSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGN-DISHWIPKRVNGPLEEVRV 418

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++CG  HTA ++  G++ T+G     GTF        G LGH +      P  V   +
Sbjct: 419 ASIACGPWHTAVVTTAGQLFTFG----DGTF--------GVLGHNDRQSAYSPREVESLK 466

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 467 GLRTVRAACGVWHTAAVVEVM 487


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 175/410 (42%), Gaps = 52/410 (12%)

Query: 27   CKRWISSTLQRRFAAL-------WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
            C R ++S +Q   A         WG    G+LG G+   R  P +        + ALA G
Sbjct: 810  CVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR--GVVALAAG 867

Query: 80   GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
            G  ++ L   G V++ G N  GQLG       +L P  +  L   V  ++ G  H+ A+ 
Sbjct: 868  GDASVALRADGSVWSWGGNASGQLGDGTLTDRAL-PAHVEHLSNAVA-VAVGETHALAVG 925

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
             DG L+ WG N +GQLG G  A  + P+  +V+ L  + +  A   F  SVAV   G   
Sbjct: 926  EDGALWAWGANGSGQLGDGGTAPSLTPV--RVKGLERVASVAAGRAF--SVAVRDDGTAW 981

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            +WG   SG+LG G            +   P  +  L+G++    +AG  H   +  +G V
Sbjct: 982  AWGTNPSGQLGDGTNH---------ARSVPNQVTSLKGIRAM--SAGAHHVVALSADGTV 1030

Query: 260  YIFGDRAVDKMLFQEGNHARRPS-----LISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            + +G    D  L Q G+ +  P+      + +L   E V  G   T  +   G    WGS
Sbjct: 1031 WTWG----DNTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARAWGS 1086

Query: 315  NENGCLGIGSIDVLHSPE--RVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHG 371
            NE G LG G      +P   +++GP    PV  V    +H    +S+G + TWG      
Sbjct: 1087 NEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWG----DN 1142

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            TF        GQLG G       P  V    +V A  VS G  H+ ALL 
Sbjct: 1143 TF--------GQLGDGTTTRRAVPLTVYGLASVVA--VSSGAWHSLALLS 1182



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 167/374 (44%), Gaps = 37/374 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+   R  P+     E+  +KA+A   + +L L +TG V+A G N  GQ
Sbjct: 283 WGSNASGQLGDGTWNDRAVPMQVPGLER--VKAVASMDSDSLALLDTGAVFAWGANGSGQ 340

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +    +  P  + GL   V  +  G  H+  +  DG L+ WG   +GQLG G    
Sbjct: 341 LGDGDTTDRA-TPGPVPGLNA-VASVVGGAQHALVLRKDGTLWAWGGGLSGQLGHGGSER 398

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P P  V  L+G+ +   A G   S+A  G G V +WG    G+LG G  +     +R
Sbjct: 399 HVVPAP--VMRLAGVTSM--ATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVR 454

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                    ++ L GV+   +AA   HS  +  +G V+ +G  A  ++         RP 
Sbjct: 455 ---------VEGLGGVRSVASAA--HHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPV 503

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  GG H   L S G ++ WG N  G LG G+     +P RV G      
Sbjct: 504 AVPGLTSVTAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSG---LGA 560

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  V+ G   + A+ S+G + TWG G     F        GQLG G  V  + P  V   
Sbjct: 561 VVAVAAGSYFSMALQSDGTVWTWGEG-----FE-------GQLGDGGGVQRLSPVRVEGL 608

Query: 402 ENVKALQVSCGFNH 415
            N+   +V+ G  H
Sbjct: 609 ANIT--RVAAGSAH 620



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 156/338 (46%), Gaps = 35/338 (10%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           PV  +A E   + ++  G AH+L L   G V+  G N  GQLG       +  P+R++GL
Sbjct: 102 PVRLAALEN--IVSVVSGDAHSLALGADGSVWTWGGNSSGQLGDGTTTDRA-TPMRVAGL 158

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
              VV ++ G  HS A+  DG ++ WG N +GQLG G     + P   +V  L+G+    
Sbjct: 159 DS-VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTP--EQVPGLNGVVALA 215

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV-KV 240
           A  GF+ ++AV   G V +WG+ GSG+LG G          ST   +P  + EL G+ +V
Sbjct: 216 A--GFDFTLAVLEDGTVRAWGSNGSGQLGDGT---------STQRLSPVKVSELSGITEV 264

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT 300
           +   AG  H+  + ++G V+ +G  A  ++     N    P  +  L   + V      +
Sbjct: 265 R---AGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAVASMDSDS 321

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
             L   G ++ WG+N +G LG G      +P  V G    + V  V  G +H   + +  
Sbjct: 322 LALLDTGAVFAWGANGSGQLGDGDTTDRATPGPVPG---LNAVASVVGGAQHALVLRKDG 378

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            L W WGG             GQLGHG    ++ P  V
Sbjct: 379 TL-WAWGGGL----------SGQLGHGGSERHVVPAPV 405



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 145/323 (44%), Gaps = 30/323 (9%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G  H+L+L+  G V+A G N  GQLG +E     L P+R++ L+  +V + +G  HS
Sbjct: 63  IAAGTQHSLYLSPGGDVWAWGGNGSGQLGGAETSLQGLAPVRLAALEN-IVSVVSGDAHS 121

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    +  P+  +V  L  +     A G   S+A+   
Sbjct: 122 LALGADGSVWTWGGNSSGQLGDGTTTDRATPM--RVAGLDSVVA--VAAGDFHSLALRED 177

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G     L         TP  +  L GV     AAGF  +  + E
Sbjct: 178 GTVWAWGTNFHGQLGRGHTQPGL---------TPEQVPGLNGVVAL--AAGFDFTLAVLE 226

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           +G V  +G     ++          P  +S+L    EV  G YH   L   G ++TWGSN
Sbjct: 227 DGTVRAWGSNGSGQLGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSN 286

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
            +G LG G+ +    P +V G      V  +       A +  G +  WG  GS      
Sbjct: 287 ASGQLGDGTWNDRAVPMQVPGLERVKAVASMDS--DSLALLDTGAVFAWGANGS------ 338

Query: 376 DGHSSGGQLGHGNDVDYIHPTIV 398
                 GQLG G+  D   P  V
Sbjct: 339 ------GQLGDGDTTDRATPGPV 355



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 17/295 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+   R RPV  +      + A+  GG H L +   G V+  G N FGQ
Sbjct: 1189 WGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGGYHALAVCSDGSVWTWGYNAFGQ 1246

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       SL P R+ GL+  VV ++ G H+S A+  DG L  WG N++GQLG G    
Sbjct: 1247 LGDGTAESRSL-PTRVEGLEG-VVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTT 1304

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +     ++V             G   +VA+ G G V +WG    G+LG G   + +    
Sbjct: 1305 RY----SRVAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRM---- 1356

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                  PR +  L    V    AG  H+  +   G V+ +G  +  ++   +  +   P 
Sbjct: 1357 ---RLVPRPVPNLS--SVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDNTNRTEPL 1411

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L     V  G   +  +   G + +WGS+  G LG+G+     SP +V  P
Sbjct: 1412 RVRELSDVTVVSGGADFSLAMKRDGTVLSWGSSLYGSLGLGATGHRSSPGQVALP 1466



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 175/475 (36%), Gaps = 127/475 (26%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R RPV        S+ A+A GG+H L L   G V+A G N  GQ
Sbjct: 483 WGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAAGGSHVLALRSDGSVWAWGYNALGQ 540

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+R+SGL   VV ++ G + S A+  DG ++ WG+   GQLG G    
Sbjct: 541 LGDGTTV-DRLTPVRVSGLGA-VVAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQ 598

Query: 163 KVIPI------------------------------------------------PTKVECL 174
           ++ P+                                                P +V  L
Sbjct: 599 RLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGL 658

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
            GI       G   S+A+ G G V +WG  G G+LG G           TS   P LI  
Sbjct: 659 QGITAVSG--GRSHSMALQGDGTVRAWGYNGYGQLGDGTL---------TSRVRPALIPG 707

Query: 235 LEGVK----------------------------VKIAAAGF------------------- 247
           L G++                            + + AAG+                   
Sbjct: 708 LTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVG 767

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             H+  +  +G V  +G+    ++      H   P  +  +P    V  G  H+  L   
Sbjct: 768 RAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASGIQHSLALACD 827

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G ++ WG+N  G LG G+     +P  V+G      V   + G    A  ++G +  W W
Sbjct: 828 GTVWAWGANARGQLGDGTTTPRVTPGLVEG--LRGVVALAAGGDASVALRADGSV--WSW 883

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           GG          ++ GQLG G   D   P  V    N  A+ V+ G  H  A+ E
Sbjct: 884 GG----------NASGQLGDGTLTDRALPAHVEHLSN--AVAVAVGETHALAVGE 926



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 160/370 (43%), Gaps = 37/370 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG G  E   R VV +   + + + ++A G  H+L     G V+A G N +G
Sbjct: 383 WGGGLSGQLGHGGSE---RHVVPAPVMRLAGVTSMATGSFHSLAALGDGSVWAWGRNTYG 439

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG   +       +R+ GL   V  +++  HHS A+ +DG ++ WG+N+ GQLG G   
Sbjct: 440 QLG-DGSTAERHAAVRVEGLGG-VRSVASAAHHSLAVGMDGTVWAWGRNAAGQLGDGTTL 497

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  L+ +     A G    +A+   G V +WG    G+LG G         
Sbjct: 498 DRARPV--AVPGLTSV--TAVAAGGSHVLALRSDGSVWAWGYNALGQLGDGT-------- 545

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
            +    TP  +  L G  V +AA  +  S  +  +G V+ +G+    ++    G     P
Sbjct: 546 -TVDRLTPVRVSGL-GAVVAVAAGSYF-SMALQSDGTVWTWGEGFEGQLGDGGGVQRLSP 602

Query: 282 SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
             +  L     V  G  H   +   G ++ WG N  G LG GS      P +V G     
Sbjct: 603 VRVEGLANITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPG---LQ 659

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            +  VS G  H+ A+  +G +  WG+ G             GQLG G     + P ++  
Sbjct: 660 GITAVSGGRSHSMALQGDGTVRAWGYNGY------------GQLGDGTLTSRVRPALIPG 707

Query: 401 GENVKALQVS 410
              ++AL  S
Sbjct: 708 LTGIQALHPS 717



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 152/347 (43%), Gaps = 29/347 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  +R  P   ++ +   ++A++ G  H + L+  G V+  G N  GQ
Sbjct: 983  WGTNPSGQLGDGTNHARSVPNQVTSLK--GIRAMSAGAHHVVALSADGTVWTWGDNTLGQ 1040

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   +    + P ++  L+  V  ++ G   + A+ +DG    WG N  GQLG GK   
Sbjct: 1041 LGDGSSSPTGMWPRQVPELRG-VEAVAAGEQFTVAVLLDGTARAWGSNEYGQLGDGKTGP 1099

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  K+E        +    + Q +V     G V +WG    G+LG G         
Sbjct: 1100 QLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNTFGQLGDGT-------- 1151

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
             +T    P  +  L    V   ++G  HS  +  +G V+ +G     ++         RP
Sbjct: 1152 -TTRRAVPLTVYGL--ASVVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRP 1208

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              ++ L     +  GGYH   + S G ++TWG N  G LG G+ +    P RV+G     
Sbjct: 1209 VQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEG---LE 1265

Query: 342  PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
             V  V+ G  ++ A+            S GT S  G+++ GQLG G 
Sbjct: 1266 GVVAVAGGDHYSLALH-----------SDGTLSAWGNNASGQLGDGT 1301


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 182/391 (46%), Gaps = 39/391 (9%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 4094 WGHNHRGQLG-GLDGSRIKNPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4151

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      +    +E L+   +KK  V +++G  H  A++ DGE++ WG+  +G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKK--VAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4209

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG    
Sbjct: 4210 HGNRDS--YDRPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGD--- 4264

Query: 217  ILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L G + + IA  +G   + CI ++  V+ +GD    K+    
Sbjct: 4265 ------SEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG 4318

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG G+ D +  P+
Sbjct: 4319 SDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPK 4378

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +V        +  ++ G  H  A S+ G++ TWG             +  GQLG G    
Sbjct: 4379 KVAA-LQGKKIISIATGSLHCVACSDAGEVFTWG------------DNDEGQLGDGTVSA 4425

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
               P +V   +    ++V CG  HT AL  Y
Sbjct: 4426 IQRPRLVQSLQGKHIVKVICGSAHTLALSTY 4456



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 3032 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHIAGGSKSLFIVSQDGKLYACGEG 3088

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 3089 TNGRLGLGHNNNVP-TPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3147

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3148 GHGNRL--TLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3203

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+  +V   A G     + C+ E+G V+ +GD    K+   
Sbjct: 3204 -------NCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRG 3256

Query: 274  EGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3257 GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKP 3316

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              +QG      V  V+ G  H  A+++ G++  WG         ++ H   GQ G GN +
Sbjct: 3317 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWG---------DNDH---GQQGSGNTI 3363

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P++V   + +   +V+CG +H+ A
Sbjct: 3364 VNKKPSLVLGLDGIFVNRVACGSSHSVA 3391



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 161/346 (46%), Gaps = 57/346 (16%)

Query: 96   GLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
            GLND  QLG             ++   L+P+ I+G  K +  +S           DG+LY
Sbjct: 3034 GLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQ----------DGKLY 3083

Query: 146  MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGA 203
              G+ +NG+LGLG      +P P +V  LS    K+ A+  G + ++A+T  GKV SWG 
Sbjct: 3084 ACGEGTNGRLGLGHN--NNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGE 3141

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            G  G+LGHG         R T E  P+LI+ L   +++  A G  HSA I  +G +Y +G
Sbjct: 3142 GEDGKLGHGN--------RLTLE-KPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWG 3192

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGC 319
                 ++   +     +P L++ L      +V CG     T  LT  G +++WG  + G 
Sbjct: 3193 LGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGK 3252

Query: 320  LGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
            LG G  +   + H  +R+ G      V Q+ CG + + A+++ G++ TWG G  +     
Sbjct: 3253 LGRGGSEGCSIPHQVDRLNG----VGVMQIECGAQFSLALTKAGEVWTWGKGDYY----- 3303

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                   +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3304 -------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3342



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 21/227 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD GRLG G   ++  P   +A     +  + CG +++  +T +G +Y  G   +G+
Sbjct: 633 WGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITASGELYTWGRGTYGR 692

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N      P  ++ LK   VV ++   G  HS  +T  G  + WG    G+LG   
Sbjct: 693 LG-HGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNES 751

Query: 160 KAAKVIPIPT---KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                +P+     +  C+  +F+     G + SVA+T  G V +WG G  GRLGHG    
Sbjct: 752 CVGTSVPVQVDLPQASCVVKVFS-----GSQFSVALTREGTVYTWGKGHGGRLGHGN--- 803

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 S     P++++ LEG K+   A G  H   +  +G +Y +G
Sbjct: 804 ------SEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWG 844



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 111/247 (44%), Gaps = 17/247 (6%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYH 133
           A  C G H L L  +G VY+ G  D G+LG  +     L P RI+ L  ++V  +  G  
Sbjct: 613 AAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKEL-PTRIAALADRQVTGVFCGSS 671

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
           +S+AIT  GELY WG+ + G+LG G    K   +PT V  L        ALG     S+ 
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKY--VPTLVTALKAHRVVHVALGCGDAHSLC 729

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G   +WG G  G+LG+  ES +           P  +   +   V    +G   S 
Sbjct: 730 VTEAGLAFAWGDGDFGKLGN--ESCV-------GTSVPVQVDLPQASCVVKVFSGSQFSV 780

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +   G VY +G     ++      H+  P ++  L   +  ++  G  H   LT+ GEL
Sbjct: 781 ALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGEL 840

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 841 YGWGRND 847



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 127/287 (44%), Gaps = 31/287 (10%)

Query: 140  VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL 199
            V  ++ +WG N   QLG G K +KV  +PT    LS +     A G +    V+  GK+ 
Sbjct: 3026 VSSKVLVWGLNDKEQLG-GLKGSKV-KLPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKLY 3083

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENG 257
            + G G +GRLG G  +++          TP+ +  L    VK  A  +G  H+  +  +G
Sbjct: 3084 ACGEGTNGRLGLGHNNNV---------PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134

Query: 258  RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
            +V+ +G+    K+         +P LI  L      ++ CG  H+  +TS GELYTWG  
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGT 372
            E G LG G       P+ V     +  V QV+CG +    +    +G + +WG     G 
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTA-LQDHRVVQVACGSRDAQTLCLTEDGLVFSWG----DGD 3249

Query: 373  FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            F        G+LG G       P  V+    V  +Q+ CG   + AL
Sbjct: 3250 F--------GKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLAL 3288



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 96/235 (40%), Gaps = 27/235 (11%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G V SWG+G  GRLGHG  S+         +  P  I  L   +V     G  +
Sbjct: 622 LALASSGDVYSWGSGDGGRLGHGDTSA---------KELPTRIAALADRQVTGVFCGSSY 672

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV-----CGGYHTCVLT 304
           SA I  +G +Y +G     ++          P+L++ L  +  VV     CG  H+  +T
Sbjct: 673 SAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTAL-KAHRVVHVALGCGDAHSLCVT 731

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
             G  + WG  + G LG  S      P +V  P +   V   S      A   EG + TW
Sbjct: 732 EAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTW 791

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G             GG+LGHGN      P +V   E  K + ++ G  H  AL
Sbjct: 792 GKG------------HGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLAL 834



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 16/130 (12%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C G H   L S G++Y+WGS + G LG G       P R+    ++  V  V CG  ++A
Sbjct: 616 CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA-LADRQVTGVFCGSSYSA 674

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS--C 411
           AI+  G++ TWG     GT+        G+LGHGN  D   PT+V   +  + + V+  C
Sbjct: 675 AITASGELYTWG----RGTY--------GRLGHGNSEDKYVPTLVTALKAHRVVHVALGC 722

Query: 412 GFNHTGALLE 421
           G  H+  + E
Sbjct: 723 GDAHSLCVTE 732



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 16/198 (8%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
            A  WG+GD+G+LG  S      PV     +   +  +  G   ++ LT  G VY  G  
Sbjct: 735 LAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             G+LG   N  +S  P  +  L+ K++V ++ G  H  A+T  GELY WG+N   Q  +
Sbjct: 795 HGGRLG-HGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQ--I 851

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             +     PI T     + I T    L      A  G  + L W    S    HG  + I
Sbjct: 852 CPECVTRDPIIT-----APILTTPPTLRVAGMAA--GVAQSLFWCHSSS----HGIPAKI 900

Query: 218 LGFLRSTSEYTPRLIKEL 235
             F+   SE+T RL+ +L
Sbjct: 901 -PFVVDLSEHTFRLLDQL 917


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 175/385 (45%), Gaps = 39/385 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 25  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 82

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 83  GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 140

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 195

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 196 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 249

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 309

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 356

Query: 392 YIHPTIVNFGENVKALQVSCGFNHT 416
              P +V   +  K  +V+CG  HT
Sbjct: 357 IQRPRLVAALQGKKVNRVACGSAHT 381



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)

Query: 57  ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 91  ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG-NRSPCDR 149

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 207

Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 258

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 318

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 377

Query: 350 WKHTAAISEGK 360
             HT A S  K
Sbjct: 378 SAHTLAWSTSK 388



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 126/287 (43%), Gaps = 31/287 (10%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GK+ + 
Sbjct: 20  GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 77

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
           G G  GRLG G   S+          TP L++ ++ V +K  A  +G  H   +   G V
Sbjct: 78  GYGAGGRLGIGGTESV---------STPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 128

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           Y +G+    K+     +   RP +I  L   E  +V  GG H+  +T+ G+LYTWG    
Sbjct: 129 YSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY 188

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGTFS 374
           G LG    +    P+ V+       VD ++CG      +    +  + +WG G       
Sbjct: 189 GRLGHSDSEDQLKPKLVEALQGHRVVD-IACGSGDAQTLCLTDDDTVWSWGDGDY----- 242

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  G+LG G       P  ++    +  ++V CG   + AL +
Sbjct: 243 -------GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTK 282



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 2   LGRSLTAMTKYYLKQDIKLGSKLGI----CKRWISSTLQRRFAA-LWGNGDYGRLGLGSL 56
           LGR  +   K  +K D   G  LG+    C    S  L +  A   WG GDY RLG GS 
Sbjct: 245 LGRGGSDGCKVPMKIDSLTG--LGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSD 302

Query: 57  ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPL 116
           +   RP      +   + A+A G  H +  TE G VY  G ND GQLG          P 
Sbjct: 303 DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ-RPR 361

Query: 117 RISGLK-KEVVQISTGYHHSSA 137
            ++ L+ K+V +++ G  H+ A
Sbjct: 362 LVAALQGKKVNRVACGSAHTLA 383


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 130/270 (48%), Gaps = 10/270 (3%)

Query: 47  DYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS 106
           D+       LE    P      E   +  ++CG  H+L +   G V+A G    GQLG  
Sbjct: 22  DFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTG 81

Query: 107 ENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           E  G +  P +I  L   +++Q+S G +HS A++  G+++ WGKNS GQLGLGK+     
Sbjct: 82  EVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQ- 140

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             P +V  L GI   Q A G   S A++  G    WG   +G+L       + G      
Sbjct: 141 DSPQRVRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLA------LSGNNVPVQ 194

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            Y PR I  L  + V   + G+ H+A + +NG+V+ FGD +  ++        R P L+ 
Sbjct: 195 SYKPRSIGALRNLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVE 254

Query: 286 KLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           ++     ++ CG YHT   + + G++ ++G
Sbjct: 255 RIDGLVSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 35/270 (12%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           +LE LR+S        +S G  HS A+   G ++ WG  S GQLG G+    +   P K+
Sbjct: 42  TLETLRVS-------LVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGE-VKGINFTPKKI 93

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           + L+GI   Q + G   S+A++ GG+V SWG    G+LG G+E          S+ +P+ 
Sbjct: 94  KTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFP--------SQDSPQR 145

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLP 288
           ++ LEG+ +   AAG  HS  +  +G  + +G+ +  ++     N    + +P  I  L 
Sbjct: 146 VRSLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALR 205

Query: 289 Y--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE-RVQGPFSESPVD- 344
                 + CG  HT VLT  G+++T+G N  G LG       HSP  + +GP     +D 
Sbjct: 206 NLGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLG-------HSPSAQDRGPQLVERIDG 258

Query: 345 ---QVSCGWKHTAA--ISEGKILTWGWGGS 369
              Q+ CG  HT A   + G+++++G G S
Sbjct: 259 LVSQIDCGSYHTLAYVYTTGQVVSFGRGPS 288



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 115/246 (46%), Gaps = 26/246 (10%)

Query: 24  LGICKRWISSTLQRRFAALWGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLKALACGGAH 82
           L +C R       R FA  WG G  G+LG G ++   + P          +  ++CG  H
Sbjct: 59  LAVCHR------GRVFA--WGAGSEGQLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYH 110

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
           +L L+E G V++ G N  GQLG+ +       P R+  L+   + Q++ G  HS A++V 
Sbjct: 111 SLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLAQVAAGGAHSFALSVS 170

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
           G  + WG NS GQL L   +   +P+    P  +  L  +     + G+E +  +T  GK
Sbjct: 171 GTSFGWGNNSAGQLAL---SGNNVPVQSYKPRSIGALRNLGVIYISCGYEHTAVLTQNGK 227

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V ++G    G+LGH   +   G         P+L++ ++G+  +I    +   A +   G
Sbjct: 228 VFTFGDNSCGQLGHSPSAQDRG---------PQLVERIDGLVSQIDCGSYHTLAYVYTTG 278

Query: 258 RVYIFG 263
           +V  FG
Sbjct: 279 QVVSFG 284



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 105/258 (40%), Gaps = 74/258 (28%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +  L  +     + G E S+AV   G+V +WGAG  G+LG G+   I         +
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGI--------NF 88

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ IK L G+K+                                               
Sbjct: 89  TPKKIKTLTGIKII---------------------------------------------- 102

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQV 346
               +V CG YH+  L+ GG++++WG N  G LG+G       SP+RV+      P+ QV
Sbjct: 103 ----QVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRS-LEGIPLAQV 157

Query: 347 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGEN 403
           + G  H+ A+S     ++GW          G++S GQL   G+   V    P  +    N
Sbjct: 158 AAGGAHSFALSVSGT-SFGW----------GNNSAGQLALSGNNVPVQSYKPRSIGALRN 206

Query: 404 VKALQVSCGFNHTGALLE 421
           +  + +SCG+ HT  L +
Sbjct: 207 LGVIYISCGYEHTAVLTQ 224


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 27/321 (8%)

Query: 11  KYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEK 70
           K++ K D+ +    G     + +   + +  ++G+ ++G+LGLGS  +  +P    A + 
Sbjct: 29  KFWFKNDVAVHLSCGDEHSAVVTGNNKLY--VFGSNNWGQLGLGSKSAVSKPTCVKALKP 86

Query: 71  HSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQIS 129
             +K  ACG  HTL  TE G VYATG ND GQLG+ +     +   +     + ++ Q+S
Sbjct: 87  EKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTTFHRVSFFTSQHKIKQLS 146

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G + S+A+T DG L+MWG NS GQ+GL       +P    +    G      + G+  S
Sbjct: 147 AGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTI----GKPVSWISCGYYHS 202

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             VT  G++  +G   +G+LG   E  +L   R      P+L+ E+    +++A  G  H
Sbjct: 203 AFVTTDGELYIFGESENGKLGLPNE--LLSNHR-----IPQLVPEIPEKVIQVACGG-EH 254

Query: 250 SACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCV 302
           S  + E+  VY      FG   +  +LF+       P ++  +       + CG  H  +
Sbjct: 255 SVVLTEDA-VYTFGLGQFGQLGLGTLLFE----TSEPKVVENIGNKTISYISCGENHAAL 309

Query: 303 LTSGGELYTWGSNENGCLGIG 323
           LT  G +YT+G   +G LG+G
Sbjct: 310 LTDNGLMYTFGDGRHGKLGLG 330



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 157/325 (48%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+  I+ENI     P +        V +S G  HS+ +T + +LY++G N+ GQLGLG 
Sbjct: 17  FGKSKIAENI-----PGKFWFKNDVAVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+A  +  PT V+ L     K AA G   ++  T GG V + G    G+LG G       
Sbjct: 72  KSA--VSKPTCVKALKPEKVKLAACGRNHTLVSTEGGNVYATGGNDEGQLGLGDTEERTT 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F R +   +   IK+L        +AG   SA + E+GR++++GD +  ++      +A 
Sbjct: 130 FHRVSFFTSQHKIKQL--------SAGSNTSAALTEDGRLFMWGDNSEGQIGLPNILNAC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++       + CG YH+  +T+ GELY +G +ENG LG+   + L S  R+     
Sbjct: 182 VPHQVTIGKPVSWISCGYYHSAFVTTDGELYIFGESENGKLGLP--NELLSNHRIPQLVP 239

Query: 340 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 396
           E P  V QV+CG +H+  ++E  + T+G G              GQLG G  + +   P 
Sbjct: 240 EIPEKVIQVACGGEHSVVLTEDAVYTFGLG------------QFGQLGLGTLLFETSEPK 287

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
           +V    N     +SCG NH   L +
Sbjct: 288 VVENIGNKTISYISCGENHAALLTD 312



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  H+  +T    +Y  G N++GQLG+      S +P  +  LK E V+++  G +H
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVS-KPTCVKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N  GQLGLG    +     T    +S  FT     KQ + G   S
Sbjct: 99  TLVSTEGGNVYATGGNDEGQLGLGDTEER-----TTFHRVS-FFTSQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G      +   L +   +   +     G  V   + G+ H
Sbjct: 153 AALTEDGRLFMWGDNSEGQIG------LPNILNACVPHQVTI-----GKPVSWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +YIFG+    K+ L  E   NH R P L+ ++P    +V CGG H+ VLT 
Sbjct: 202 SAFVTTDGELYIFGESENGKLGLPNELLSNH-RIPQLVPEIPEKVIQVACGGEHSVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG 365
              +YT+G  + G LG+G++    S  +V        +  +SCG  H A +++  ++   
Sbjct: 261 DA-VYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNGLMYTF 319

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI-VNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+  NF + V  L V+CG
Sbjct: 320 GDGRHGKLG---------LGLENFTNQFTPTLCCNFLKFVVKL-VACG 357



 Score = 39.3 bits (90), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +C  F K  +K +ACGG H +  
Sbjct: 319 FGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVF 364


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 173/378 (45%), Gaps = 37/378 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS   R RPV  S     S+ A+A GG+HT+ L   G V+A G N  GQ
Sbjct: 474 WGRNAAGQLGDGSTRDRARPVAVSGLT--SVVAVATGGSHTMALRGDGTVWAWGYNALGQ 531

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    +   L P+R++ L   VV ++ G + S A+  DG ++ WG+   GQ+G G    
Sbjct: 532 LGDGTTV-DRLTPVRVARLDS-VVAVAAGTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQ 589

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+  +V  L+ +   + A G   ++AV G G V +WG  G G+LG G  S       
Sbjct: 590 RLFPV--QVAGLTNV--TRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWS------- 638

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
               + P  +  L G+     + G  HS  +  +G V  +G     ++         RP+
Sbjct: 639 --DRFRPVQVPGLTGITA--VSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPA 694

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           ++  L   + +     H   L + G L  WG N  G LG+G+      P +V+G      
Sbjct: 695 VVPGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRG---LGR 751

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           VD+++ G  HT  +  +G +L W            G ++ GQLG G       P +V   
Sbjct: 752 VDRLAVGRAHTLMVRPDGAVLAW------------GENASGQLGDGTTTHRAGPVLVRGV 799

Query: 402 ENVKALQVSCGFNHTGAL 419
             V++  V+ G  H+ AL
Sbjct: 800 PCVRS--VASGVLHSLAL 815



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 17/295 (5%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG   +G+LG G+  SR  PV  +  +K  + A+  GG H L +   G V+A G N FGQ
Sbjct: 1180 WGANGFGQLGDGTTLSRTTPVRVAGLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQ 1237

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P+R+ GL   V  ++ G HHS A+  DG L  WG N+ GQLG G    
Sbjct: 1238 LG-DGTAESRLLPVRVEGLSN-VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTT 1295

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            +   +   V+ + G+   +A  G   ++A+ G G V +WG     +LG G +S+      
Sbjct: 1296 RYSRV--WVKGVDGVVEVRA--GAAHTLALRGDGTVWTWGDNTHSQLGAGDDST------ 1345

Query: 223  STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
              +   PR +  L GV      AG  HS  +   G V+ +G  +  ++   +  +   P 
Sbjct: 1346 -RTRIVPRPVPGLSGVTA--IGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPL 1402

Query: 283  LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
             + +L     V  G   +  +   G + +WGS+ +G LG+G+     SP +V  P
Sbjct: 1403 RVKELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSSPGQVALP 1457



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 153/353 (43%), Gaps = 32/353 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G      R           + ++  G AH+L L E G V+A G N  GQ
Sbjct: 73  WGGNTSGQLG-GEATPLQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQ 131

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P++++GL  +VV ++ G  HS A+  DG ++ WG N +GQLG G    
Sbjct: 132 LGDGTTT-DRVTPMQVAGL-TDVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEP 189

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P P  V  L G+    A  GF+ ++AV   G V +WGA  SG+LG G          
Sbjct: 190 GLTPEP--VPGLEGVVALAA--GFDFTLAVMDDGTVRAWGANSSGQLGDGT--------- 236

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T    P  +  + G+      AG  H+  + ++G V+ +G  +  ++     +    P+
Sbjct: 237 FTQRLAPVEVAHISGISA--VTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPA 294

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L   + V      +  L   G +  WG+N +G LG    D   +P  V G  S   
Sbjct: 295 RVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPGLRS--- 351

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           V  V  G +H  A+  G    W WGG             GQLGHG    ++ P
Sbjct: 352 VAAVVGGAQHALAL-RGDGTLWAWGGGL----------AGQLGHGGSERHVVP 393



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 167/384 (43%), Gaps = 43/384 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  SR  P      +     A       +L L   G  +A G N  GQ
Sbjct: 824  WGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGG--DASLALLADGTAWAWGANAHGQ 881

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG       ++ P ++  L   ++ ++ G  H  A   DG L+ WG N +GQLG G    
Sbjct: 882  LGDGSTSDRAV-PGQLK-LPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTP 939

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
               P P +V+ L G+ +  A   F  S+AV   G   +WGA  SG+LG G          
Sbjct: 940  S--PTPVRVKGLEGVASVSAGRAF--SLAVRQDGTAWAWGANPSGQLGDG---------- 985

Query: 223  STSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              + ++ R+ K++  VK V+  +AG  H   + E+G V+ +GD  + ++   +G  A   
Sbjct: 986  --TNHSQRVPKQVTSVKRVRAMSAGAHHVVALGEDGAVWTWGDNTLGQL--GDGTSAPTW 1041

Query: 281  --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP--ERVQG 336
              P  + +L   E V  G   +  +  GG  + WGSNE G LG G      +P   R++ 
Sbjct: 1042 MWPRQVPELRDVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEA 1101

Query: 337  PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
                 PV  V    +H  A+ ++G +  WG         ++ H   GQLG G       P
Sbjct: 1102 SKLRQPVRTVRAWAQHAVALMADGTVQAWG---------DNAH---GQLGDGTTERRAAP 1149

Query: 396  TIVNFGENVKALQVSCGFNHTGAL 419
             +V     V A  VS G  H+ AL
Sbjct: 1150 VVVRGLTGVVA--VSTGAWHSLAL 1171



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 153/346 (44%), Gaps = 36/346 (10%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A G  H+L+++ TG V+A G N  GQLG        L P  +    +++V + +G  HS
Sbjct: 54  IAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPS-PRDIVSVVSGEAHS 112

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG NS+GQLG G    +V P+  +V  L+ +     A G   S+A+ G 
Sbjct: 113 LALDEAGTVWAWGGNSSGQLGDGTTTDRVTPM--QVAGLTDVVA--VAAGDFHSLALRGD 168

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G     L         TP  +  LEGV     AAGF  +  + +
Sbjct: 169 GTVWAWGTNFHGQLGRGHTEPGL---------TPEPVPGLEGVVAL--AAGFDFTLAVMD 217

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G V  +G  +  ++   +G   +R  P  ++ +     V  G YH   L   G ++TWG
Sbjct: 218 DGTVRAWGANSSGQL--GDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWG 275

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
           +N +G LG G+      P RV G      V  +       A +  G +L WG  GS    
Sbjct: 276 ANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDA--SSLALLEAGSVLAWGANGS---- 329

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                   GQLG     D   P  V    +V A  V  G  H  AL
Sbjct: 330 --------GQLGDSGTDDRATPGEVPGLRSVAA--VVGGAQHALAL 365



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 171/381 (44%), Gaps = 37/381 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG G+  S+  P   ++ ++  ++A++ G  H + L E G V+  G N  GQ
Sbjct: 974  WGANPSGQLGDGTNHSQRVPKQVTSVKR--VRAMSAGAHHVVALGEDGAVWTWGDNTLGQ 1031

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   +    + P ++  L+ +V  ++ G   S A+ V G  + WG N  GQLG GK   
Sbjct: 1032 LGDGTSAPTWMWPRQVPELR-DVEAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGP 1090

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQ-SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++ P+  ++E        +    + Q +VA+   G V +WG    G+LG G         
Sbjct: 1091 RLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGT-------- 1142

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
             +     P +++ L GV     + G  HS  +  +G V+ +G     ++   +G    R 
Sbjct: 1143 -TERRAAPVVVRGLTGVVA--VSTGAWHSLALRSDGTVWAWGANGFGQL--GDGTTLSRT 1197

Query: 281  -PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
             P  ++ L     +  GGYH   + S G ++ WG N  G LG G+ +    P RV+G   
Sbjct: 1198 TPVRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEG--- 1254

Query: 340  ESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             S V  V+ G  H+ A +++G +  W            G+++ GQLG G          V
Sbjct: 1255 LSNVTSVAGGDHHSLALLADGSLGAW------------GNNAAGQLGDGTGTTRYSRVWV 1302

Query: 399  NFGENVKALQVSCGFNHTGAL 419
               + V  ++V  G  HT AL
Sbjct: 1303 KGVDGV--VEVRAGAAHTLAL 1321



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 177/385 (45%), Gaps = 43/385 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG GS      PV     E   + +++ G A +L + + G  +A G N  GQ
Sbjct: 924  WGANGSGQLGEGSTTPSPTPVRVKGLE--GVASVSAGRAFSLAVRQDGTAWAWGANPSGQ 981

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG   N    + P +++ +K+ V  +S G HH  A+  DG ++ WG N+ GQLG G  A 
Sbjct: 982  LGDGTNHSQRV-PKQVTSVKR-VRAMSAGAHHVVALGEDGAVWTWGDNTLGQLGDGTSAP 1039

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              +  P +V  L  +  +  A G + SVAV  GG   +WG+   G+LG G+    L    
Sbjct: 1040 TWM-WPRQVPELRDV--EAVAAGEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRL---- 1092

Query: 223  STSEYTPRLIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                 TP  ++ +E  K    V+   A   H+  +  +G V  +GD A  ++   +G   
Sbjct: 1093 -----TPVQVR-IEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNAHGQL--GDGTTE 1144

Query: 279  RR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RR  P ++  L     V  G +H+  L S G ++ WG+N  G LG G+     +P RV G
Sbjct: 1145 RRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVAG 1204

Query: 337  PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
                  V  +  G  H  A+ S+G +  W            G+++ GQLG G     + P
Sbjct: 1205 ---LQKVVAIGAGGYHALAVRSDGSVWAW------------GYNAFGQLGDGTAESRLLP 1249

Query: 396  TIVNFGENVKALQVSCGFNHTGALL 420
              V    NV +  V+ G +H+ ALL
Sbjct: 1250 VRVEGLSNVTS--VAGGDHHSLALL 1272



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 142/324 (43%), Gaps = 23/324 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      E+  +KA+A   A +L L E G V A G N  GQ
Sbjct: 274 WGANSSGQLGDGAWSDRAVPARVPGLER--VKAVASMDASSLALLEAGSVLAWGANGSGQ 331

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG S     +  P  + GL+  V  +  G  H+ A+  DG L+ WG    GQLG G    
Sbjct: 332 LGDSGTDDRA-TPGEVPGLRS-VAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSER 389

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V+P P     L        A G   S+A  G G V SWG    G+LG G  +     +R
Sbjct: 390 HVVPAP----LLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVR 445

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                    ++ L G++  +AA+G  HS  +  +G V+ +G  A  ++         RP 
Sbjct: 446 ---------VEGLSGIR-GVAASGH-HSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPV 494

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     V  GG HT  L   G ++ WG N  G LG G+     +P RV        
Sbjct: 495 AVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVA---RLDS 551

Query: 343 VDQVSCGWKHTAAIS-EGKILTWG 365
           V  V+ G   + A+  +G + TWG
Sbjct: 552 VVAVAAGTYFSMALRGDGTVWTWG 575



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 154/363 (42%), Gaps = 38/363 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPV---VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
            WG+ +YG+LG G    R  PV   + ++  +  ++ +     H + L   G V A G N 
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
             GQLG          P+ + GL   VV +STG  HS A+  DG ++ WG N  GQLG G 
Sbjct: 1135 HGQLG-DGTTERRAAPVVVRGLTG-VVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGT 1192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++  P+  +V  L  +    A  G   ++AV   G V +WG    G+LG G   S L 
Sbjct: 1193 TLSRTTPV--RVAGLQKVVAIGA--GGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRL- 1247

Query: 220  FLRSTSEYTPRLIKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                       L   +EG+  V   A G  HS  +  +G +  +G+ A  ++    G   
Sbjct: 1248 -----------LPVRVEGLSNVTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR 1296

Query: 279  RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQG 336
                 +  +    EV  G  HT  L   G ++TWG N +  LG G  S      P  V G
Sbjct: 1297 YSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVPG 1356

Query: 337  PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
                S V  +  G +H+ A+   K   W W          G +S GQLG G++ +   P 
Sbjct: 1357 ---LSGVTAIGAGARHSFAVGP-KGTVWAW----------GRNSHGQLGLGDNANRAEPL 1402

Query: 397  IVN 399
             V 
Sbjct: 1403 RVK 1405



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 44/290 (15%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI---PIPTKVECLSGIFTKQA 182
           ++I+ G  HS  ++  G ++ WG N++GQLG      + +   P+P+  + +S +  +  
Sbjct: 52  MRIAAGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAH 111

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           +L  +++      G V +WG   SG+LG G          +T   TP  +  L    V  
Sbjct: 112 SLALDEA------GTVWAWGGNSSGQLGDGT---------TTDRVTPMQVAGL--TDVVA 154

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-LPYSEEVV---CGGY 298
            AAG  HS  +  +G V+ +G         Q G     P L  + +P  E VV    G  
Sbjct: 155 VAAGDFHSLALRGDGTVWAWG----TNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFD 210

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-S 357
            T  +   G +  WG+N +G LG G+     +P  V      S +  V+ G  H  A+  
Sbjct: 211 FTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVA---HISGISAVTAGTYHAVALGK 267

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           +G + TW            G +S GQLG G   D   P  V   E VKA+
Sbjct: 268 DGGVWTW------------GANSSGQLGDGAWSDRAVPARVPGLERVKAV 305



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 19/148 (12%)

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           E   A R   I+       +  G  H+  ++  G ++ WG N +G LG G    L   +R
Sbjct: 35  EQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-GEATPL---QR 90

Query: 334 VQGPFSESPVDQVSC--GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +      SP D VS   G  H+ A+ E   + W WGG          +S GQLG G   D
Sbjct: 91  LAPAPLPSPRDIVSVVSGEAHSLALDEAGTV-WAWGG----------NSSGQLGDGTTTD 139

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + P  V    +V A  V+ G  H+ AL
Sbjct: 140 RVTPMQVAGLTDVVA--VAAGDFHSLAL 165


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2964 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3023

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3024 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3082

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L   +++  A G  HSA +  +G +Y +G     +
Sbjct: 3083 GH--------FSRMNCD-KPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3134 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3193

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3194 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3240

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3241 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3277



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3961 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4018

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4019 GRLGIGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4076

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4077 HGSRSP--CDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4131

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4132 ------SEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4186 SDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4245

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4246 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4292

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4293 IQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 186/397 (46%), Gaps = 36/397 (9%)

Query: 32   SSTLQRRFAALWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTET 89
            SS   R    +WG  D  +LG G   S+ + P         ++  +A GG+ +LF +T  
Sbjct: 2956 SSAAVRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVA-GGSKSLFAVTVE 3013

Query: 90   GCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYM 146
            G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H++A+TVDG+++ 
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073

Query: 147  WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            WG+  +G+LG   +       P  +E L     +  A G   S A+T  G++ +WG G  
Sbjct: 3074 WGEGDDGKLGHFSRMN--CDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131

Query: 207  GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGD 264
            GRLGHG          +T++  P+++K L G +V   A G     +  + + G V+ +GD
Sbjct: 3132 GRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGD 3182

Query: 265  RAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
                K+          P  I +L      ++ CG   +  LT  G ++TWG  +   LG 
Sbjct: 3183 GDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3242

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
            GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG         ++ H   
Sbjct: 3243 GSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---------DNDH--- 3289

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3290 GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 131/291 (45%), Gaps = 18/291 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  + G+LG          P  +  L+  EVV ++ G  
Sbjct: 4047 AVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-RPRVVESLRGIEVVDVAAGGA 4105

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+ +T  G+LY WGK   G+LG      ++ P    VE L G      A G    Q++ 
Sbjct: 4106 HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEVLQGHRVVDVACGSGDAQTLC 4163

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S 
Sbjct: 4164 LTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKIESLTGLGVVKVECGSQFSV 4214

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             + ++G VY +G     ++     +H RRP  +  L   +   +  G  H    T  GE+
Sbjct: 4215 ALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 4274

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            YTWG N+ G LG G+ + +  P R+        V++V+CG  HT A S  K
Sbjct: 4275 YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACGSAHTLAWSTSK 4324



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A     ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3074 WGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3133

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3134 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3191

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3192 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3248

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3249 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3297

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3298 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3329



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ ++V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLEVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 145/318 (45%), Gaps = 39/318 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 I----FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                     A G   S A+T  G++ +WG G  GRLGHG          S  E  P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
             L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
           E  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P  ++G   +  +D V+ 
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVID-VAA 717

Query: 349 GWKHTAAISE-GKILTWG 365
           G  H  A++E  ++ +WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           PRL++ L G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 136/304 (44%), Gaps = 44/304 (14%)

Query: 129  STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
            S G   S+A+    ++++WG N   QLG G K +K I +P+  E LS +   Q A G + 
Sbjct: 2951 SAGLESSAAVRT--KVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKS 3006

Query: 189  SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
              AVT  GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSG 3058

Query: 247  FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLT 304
              H+  +  +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LT
Sbjct: 3059 GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT 3118

Query: 305  SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKI 361
            S GELYTWG  E G LG G       P+ V+       V QV+CG +     A   EG +
Sbjct: 3119 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLV 3177

Query: 362  LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNH 415
             +WG     G F        G+LG G           N  +N++ L      Q+ CG   
Sbjct: 3178 FSWG----DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQF 3219

Query: 416  TGAL 419
            + AL
Sbjct: 3220 SLAL 3223



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3956 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4014

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 4015 YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4074

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4075 LGHGSRSPC---------DRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4125

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4126 RLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4185

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P +++   +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4186 SDGCKVPMKIES-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4232

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4233 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQGGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLEVVKVRCGSQFSVALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++      K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 4004

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 4005 TADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGG 368
            Y+WG  E+G LG GS      P  V+       VD V+ G  H+A ++  G + TWG G 
Sbjct: 4065 YSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVD-VAAGGAHSACVTAAGDLYTWGKG- 4122

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGH +  D + P +V   +  + + V+CG
Sbjct: 4123 -----------RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACG 4155



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 18/121 (14%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP----VDQVSCGWKH 352
           G+H   L + GE+++WG  + G LG G    L  P +V   FS       V  ++CG  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEP-KVISAFSGKQGGKHVVHIACGSTY 563

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           +AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+C
Sbjct: 564 SAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 412 G 412
           G
Sbjct: 612 G 612



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +        +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPAALPGLDTKHIVGIACGPAQSFA 776


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ +   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 152/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  + GL
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN-------SDTLG----PQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  VD 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 84/173 (48%), Gaps = 13/173 (7%)

Query: 130  TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            +G   +  +T D  ++ WG    G+LG G   +    +P K++ L+G+   +   G + S
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFS 4081

Query: 190  VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            VA+T  G V +WG G   RLGHG +  +           PR ++ L+G KV   A G LH
Sbjct: 4082 VALTKSGAVYTWGKGDYHRLGHGSDDHV---------RRPRQVQGLQGKKVIAIATGSLH 4132

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHT 300
              C  E+G VY +GD    ++     N  +RP L++ L   +   V CG  HT
Sbjct: 4133 CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4185



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 102/250 (40%), Gaps = 43/250 (17%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV--- 198
            G +Y WG N  GQLG G + AKV  +PT  E L+ +   Q   G +   AVT  GKV   
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKV-KVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEAL 4012

Query: 199  --------------------------LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
                                       SWG G  G+LG G          S     P  I
Sbjct: 4013 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMKI 4063

Query: 233  KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
              L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   + 
Sbjct: 4064 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKV 4123

Query: 292  -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
              +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG 
Sbjct: 4124 IAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACGS 4182

Query: 351  KHTAAISEGK 360
             HT A S  K
Sbjct: 4183 AHTLAWSTSK 4192



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 77/150 (51%), Gaps = 4/150 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P+   +     +  + CG   ++ LT++G VY  G  D+ +
Sbjct: 4041 WGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHR 4100

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG   +  +   P ++ GL+ K+V+ I+TG  H    T DGE+Y WG N  GQLG G   
Sbjct: 4101 LGHGSD-DHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTN 4159

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
            A  I  P  V  L G    + A G   ++A
Sbjct: 4160 A--IQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 48/320 (15%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    + QI+        ++ +G +YM   NS+    QL  G  +  ++ I   
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLGPQLVQGLASRNIVKI--- 499

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 500 ----------AAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPK 540

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 541 MISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTG 600

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  
Sbjct: 601 LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLD 659

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V +V CG + + A++ +G++ +WG G +             +LGHG +    +P ++   
Sbjct: 660 VVKVRCGSQFSVALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGL 707

Query: 402 ENVKALQVSCGFNHTGALLE 421
           +  K + V+ G  H  AL E
Sbjct: 708 QGKKVVDVAAGSTHCLALTE 727



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 89/187 (47%), Gaps = 15/187 (8%)

Query: 67   AFEKHSLKALACGG--AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
            A + + +  +ACG   A TL LT+   V++ G  D+G+LG   + G  + P++I  L   
Sbjct: 4011 ALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV-PMKIDSLTGL 4069

Query: 125  -VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
             VV++  G   S A+T  G +Y WGK    +LG G      +  P +V+ L G      A
Sbjct: 4070 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDH--VRRPRQVQGLQGKKVIAIA 4127

Query: 184  LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
             G    V  T  G+V +WG    G+LG G  ++I           PRL+  L+G K+   
Sbjct: 4128 TGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAI---------QRPRLVAALQGKKINRV 4178

Query: 244  AAGFLHS 250
            A G  H+
Sbjct: 4179 ACGSAHT 4185



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRITKP-----EPTALPGLDTKHIVGIACGPAQSFA 776


>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
           alkenivorans AK-01]
          Length = 437

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 153/342 (44%), Gaps = 42/342 (12%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---SGLKKE-VVQISTGY 132
           A GG H+L +   G V+A G N  GQLGI  N   SL P+R+   SG     V++++ G 
Sbjct: 61  AGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKA-SLSPVRVMHKSGAPLNGVLKVAAGE 119

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT---KVECLSGIFTKQAALGFEQS 189
            HS A+T  GE++ WG NS GQLG G    +  P+     +   L  I    AA G + S
Sbjct: 120 RHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVG--AACGGKHS 177

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +AV   G V +WG+   G++G G   +     R       R  K L GVK    AAGF H
Sbjct: 178 LAVASDGTVWAWGSNSDGQIGDGTLKN-----RQNPRQVMRFGKPLAGVKA--VAAGFAH 230

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLISKLPYSEEVVCGGYHTCVLT 304
           S  +  +G V+ +GD    ++        + P     S+   L     +  G   +  LT
Sbjct: 231 SLALSVDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAFSLALT 290

Query: 305 SGGELYTWGSNENGCLGIGS-----IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SE 358
             GE++ WG+N  G LG+G       D L  P R         V  ++   +H+ A+ ++
Sbjct: 291 RDGEVWAWGNNGVGQLGMGPHNGFVRDPL--PVRAANGVPLKGVRAITANGRHSLALMND 348

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           G +L WG G              GQLG G      HPT+ + 
Sbjct: 349 GSVLAWGAGDR------------GQLGQGAQNHEDHPTLASL 378



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/300 (31%), Positives = 136/300 (45%), Gaps = 32/300 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---ACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG G    R  PV       + L+ +   ACGG H+L +   G V+A G N 
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193

Query: 100 FGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            GQ+G    +N     + +R       V  ++ G+ HS A++VDG ++ WG N  GQLG 
Sbjct: 194 DGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALSVDGTVWAWGDNEFGQLGD 253

Query: 158 GKKAAKVIPIPTKVEC---LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                +  P+         L  +    A   F  S+A+T  G+V +WG  G G+LG G  
Sbjct: 254 CSDYDRKAPVQVMHSVDRPLDNVVAIAAGRAF--SLALTRDGEVWAWGNNGVGQLGMGPH 311

Query: 215 SSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
           +   GF+R      P  ++   GV    V+   A   HS  +  +G V  +G  A D+  
Sbjct: 312 N---GFVRD-----PLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWG--AGDRGQ 361

Query: 272 FQEG--NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             +G  NH   P+L S       V+C   G YH+  +   G +  WG N+ G LGIG  D
Sbjct: 362 LGQGAQNHEDHPTLASL----HSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIGKAD 417



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 157/342 (45%), Gaps = 35/342 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC---SAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG+   G+LG+G+ ++   PV     S    + +  +A G  H+L LT  G V+  G N 
Sbjct: 79  WGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGEVWTWGDNS 138

Query: 100 FGQLGISENIGYSLE---PLRISGLK----KEVVQISTGYHHSSAITVDGELYMWGKNSN 152
            GQLG     G+  E   P+++  ++    + +V  + G  HS A+  DG ++ WG NS+
Sbjct: 139 KGQLG----DGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNSD 194

Query: 153 GQLGLGKKAAKVIPIPTKV--ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           GQ+G G    +  P       + L+G+  K  A GF  S+A++  G V +WG    G+LG
Sbjct: 195 GQIGDGTLKNRQNPRQVMRFGKPLAGV--KAVAAGFAHSLALSVDGTVWAWGDNEFGQLG 252

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +       ++  +    + + L+ V V I AAG   S  +  +G V+ +G+  V ++
Sbjct: 253 DCSDYD----RKAPVQVMHSVDRPLDNV-VAI-AAGRAFSLALTRDGEVWAWGNNGVGQL 306

Query: 271 LFQEGNHARRPSLISK------LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
                N   R  L  +      L     +   G H+  L + G +  WG+ + G LG G+
Sbjct: 307 GMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAGDRGQLGQGA 366

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
            +    P       S   V  ++ G  H+ A++E G +L WG
Sbjct: 367 QNHEDHPTLA----SLHSVICLAAGRYHSLAVAENGAVLAWG 404



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 101/226 (44%), Gaps = 29/226 (12%)

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
           AA G   S+ V   G V +WG   SG+LG G   + L  +R   +        L GV +K
Sbjct: 60  AAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSG----APLNGV-LK 114

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEV--VCG 296
           + AAG  HS  +   G V+ +GD +  ++    F E     +   I   P    V   CG
Sbjct: 115 V-AAGERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACG 173

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G H+  + S G ++ WGSN +G +G G++    +P +V     P +   V  V+ G+ H+
Sbjct: 174 GKHSLAVASDGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAG--VKAVAAGFAHS 231

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            A+S +G +  W            G +  GQLG  +D D   P  V
Sbjct: 232 LALSVDGTVWAW------------GDNEFGQLGDCSDYDRKAPVQV 265



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 24/189 (12%)

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI-----SKLPYSEEVVCG 296
           IAA G  HS  +  +G V+ +GD +  ++       +  P  +     + L    +V  G
Sbjct: 59  IAAGGGYHSLVVKNDGTVWAWGDNSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV---SCGWKHT 353
             H+  LT+ GE++TWG N  G LG G      SP +V+     +P++ +   +CG KH+
Sbjct: 119 ERHSLALTAKGEVWTWGDNSKGQLGDGFFYERRSPVKVRH-IRTNPLENIVGAACGGKHS 177

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP-TIVNFGENVKALQ-VS 410
            A+ S+G +  W WG           +S GQ+G G   +  +P  ++ FG+ +  ++ V+
Sbjct: 178 LAVASDGTV--WAWGS----------NSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVA 225

Query: 411 CGFNHTGAL 419
            GF H+ AL
Sbjct: 226 AGFAHSLAL 234



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLN 98
           WGN   G+LG+G      R P+   A     LK   A+   G H+L L   G V A G  
Sbjct: 298 WGNNGVGQLGMGPHNGFVRDPLPVRAANGVPLKGVRAITANGRHSLALMNDGSVLAWGAG 357

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           D GQLG      +   P   S     V+ ++ G +HS A+  +G +  WG N  GQLG+G
Sbjct: 358 DRGQLGQGAQ-NHEDHPTLAS--LHSVICLAAGRYHSLAVAENGAVLAWGDNQKGQLGIG 414

Query: 159 KKAAKVIPIPTK 170
           K       +P K
Sbjct: 415 KADKNFHALPEK 426


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 142/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+V++++ G HHS A+  DGEL+ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            K+  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LH  C+++                                
Sbjct: 223 TP----------VRVAA---LHGMCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG GS + L SP ++     E  ++  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVE-KERVIEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G ++A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +I+     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L G+   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                     +++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PTQIMVEKERV-IEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 145/311 (46%), Gaps = 29/311 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P     ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEAGSIRKACV-FGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAVTG-GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V +T   G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G ++ +G     ++      +   P  I+   +++
Sbjct: 127 IKQVIEV-----ACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV        V+Q+ C
Sbjct: 182 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALHGMCVNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG G+  + + PT +   E  + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGSKNNLLSPTQI-MVEKERVIE 288

Query: 409 V-SCGFNHTGA 418
           + +C   HT A
Sbjct: 289 IAACHSTHTSA 299



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GEL+ WG N  G +G GS     +P ++        V  ++CG   + A+   G++ 
Sbjct: 144 AADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V     +   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/138 (34%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG        L P +I   K+ V++I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LGTGSKNNL-LSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFCCTDDVF 333


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 101 WGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P RI+G  +   V  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 161 GLLGHGKDVSHWI-PKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V   G+  V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGN-TV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+ ++      +V CG YH  VLT   E++TWG   NG LG G I
Sbjct: 328 YGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDI 387

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           +    P  V+    +  V  ++CG   TAAI + K
Sbjct: 388 EDRKIPTLVEA-LRDRSVRHIACGANFTAAICQHK 421



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 165/366 (45%), Gaps = 46/366 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHH 134
           + CG  H+  +T+ G V+  G    G+LG       S+ P  I  L    V I + G  H
Sbjct: 82  VDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRED-SIHPRLIESLAVCNVDIVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG GK  +  IP       L G+     + G   +  +
Sbjct: 141 TCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIP-KRIAGALEGLAVAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           P+ ++ L G+K    A G  H+A 
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESI---------SCPKEVESLSGLKTISVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGG 297
           I E           +G+++ +GD   DK     G+   R  P+ ++ L   +   + CG 
Sbjct: 251 IVEVIVTQSSSSISSGKLFTWGDG--DKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             T  LT+ G++ + G+   G LG    D    P  V+    E+ V QV+CG  H A ++
Sbjct: 309 SLTVGLTTSGKVLSMGNTVYGQLGNPRSDG-KIPCLVEEIVGENVV-QVACGSYHVAVLT 366

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            + ++ TWG G +            G+LGHG+  D   PT+V    +     ++CG N T
Sbjct: 367 IKSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFT 414

Query: 417 GALLEY 422
            A+ ++
Sbjct: 415 AAICQH 420



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 75/213 (35%), Positives = 103/213 (48%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEGVKVKIA---AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST        K LE   V  A     G  HSA + +NG V+ +G+ +  ++      
Sbjct: 56  VVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P LI  L     + V CG +HTC +T+ GELYTWG  ++  G LG G  DV H  P
Sbjct: 116 DSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGK-DVSHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G      V  VSCG  HTA I+  G++ T+G     GTF        G LGHGN  
Sbjct: 175 KRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFG----DGTF--------GVLGHGNRE 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
               P  V     +K + V+CG  HT A++E +
Sbjct: 223 SISCPKEVESLSGLKTISVACGVWHTAAIVEVI 255


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L       + G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLA------LSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN +G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      RP +      +++  +ACG  HT  ++ +G ++    G ++ 
Sbjct: 288 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 347

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V+ ++ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 348 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 406

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
            + +  +P P +V+ LSG+ T + A G   + A+              K+ +WG G   R
Sbjct: 407 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 464

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  A  
Sbjct: 465 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 515

Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     R P L+  KL   + EE+ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 516 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 571

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G  +   SP  V+    +  V  +SCG   TA+I
Sbjct: 572 GDTEDRRSPTFVEA-LKDRNVKSISCGSNFTASI 604



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 158/360 (43%), Gaps = 40/360 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACG  H   +T  G V+  G    G+LG   +  +S   L        V  ++ G +H+
Sbjct: 269 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 328

Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
            A++  G+L+ WG  ++  G LG G + +  IP   +V   L G+     A G   S   
Sbjct: 329 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIP--KRVSGPLEGLQVLSVACGTWHSALA 386

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  GK+ ++G G  G LGHG   S+           PR ++ L G+K    A G  H+A 
Sbjct: 387 TSNGKLFTFGDGTFGVLGHGDRESVP---------YPREVQILSGLKTIKVACGVWHTAA 437

Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHT 300
           I E          + +++ +GD    ++          P+ +S L  Y+  ++ CG   T
Sbjct: 438 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 497

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
             LT+ G ++T G    G LG   +     P  VQ       V+++SCG  H A + S  
Sbjct: 498 VALTTSGHVFTMGGTAYGQLG-NPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRS 556

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ TWG G +            G+LGHG+  D   PT V   ++     +SCG N T ++
Sbjct: 557 EVFTWGRGAN------------GRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI 604



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 19/186 (10%)

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTC 301
           A G  H A +   G V+ +G+ +  ++     N   RP L+  L  +  + V CG YHTC
Sbjct: 270 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 329

Query: 302 VLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTA-AIS 357
            +++ G+L+TWG  ++  G LG G+ +V H  P+RV GP     V  V+CG  H+A A S
Sbjct: 330 AVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWIPKRVSGPLEGLQVLSVACGTWHSALATS 388

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            GK+ T+G     GTF        G LGHG+     +P  V     +K ++V+CG  HT 
Sbjct: 389 NGKLFTFG----DGTF--------GVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTA 436

Query: 418 ALLEYV 423
           A++E +
Sbjct: 437 AIIEVM 442



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG GS E+   P   SA   ++   LACG   T+ LT +G V+  G   +GQ
Sbjct: 457 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 516

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   + G  L  L    L  E V +IS G +H + +T   E++ WG+ +NG+LG G   
Sbjct: 517 LGNPLSDG-RLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 575

Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
            +    PT VE L     K  + G  F  S+ +
Sbjct: 576 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 606


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  SG+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 148/317 (46%), Gaps = 30/317 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+   V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLTVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGSHGTFSEDGHSSG 381
           G G S    S+  HS  
Sbjct: 313 GHGPSDT--SKPTHSEA 327



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN +G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSSGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS+GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 139/311 (44%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  G+L+ WGK   G+LG G    ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L  + V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4196 IDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4315 SAHTLAWSTSK 4325



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ +   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKLISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3182

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3183 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    ++  V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4187 SDGCKVPMKIDS-LTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4233

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 46/319 (14%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQI+        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 490

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P+L
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKL 541

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 542 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 601

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  +
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDI 660

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +V CG + + A++ +G++ TWG G +             +LGHG +    +P ++   +
Sbjct: 661 VKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHVRYPKLLEGLK 708

Query: 403 NVKALQVSCGFNHTGALLE 421
             K + V+ G  H  AL E
Sbjct: 709 GKKVIDVAAGSTHCLALTE 727


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSFEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  G+L+ WGK   G+LG G    ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4315 SAHTLAWSTSK 4325



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ +   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3182

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3183 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 747 RITKPEPAALPGLDTK 762



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4233

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG    +           P++I  L G +    V   A 
Sbjct: 509 LALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKMISALSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  + +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYTWGKGDNQ------------RLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A  G +  AC       +  NGRVY   +    +   L Q        SL S+      
Sbjct: 449 LANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQ--------SLASRNIVKIA 500

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L++ GE+++WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 501 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDQTIPMLVTGLKGLKVID 608

Query: 409 VSCG 412
           VSCG
Sbjct: 609 VSCG 612


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2901 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2960

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2961 NGRLGLGISSGTV-PIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3019

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3020 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3071 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3130

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3131 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3177

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3178 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3214



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3897 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3954

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3955 GRLGIGGTESVSSPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4012

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G+     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4013 HGSRSP--CDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4067

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4068 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4122 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4181

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4182 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4228

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4229 IQRPRLVAALQGKKVNRVACGSAHTLA 4255



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   +V+   + +G  H
Sbjct: 2939 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRH 2998

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2999 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3056

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3057 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3107

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3108 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3167

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3168 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3222

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3223 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2957 GEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3016

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3017 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3075

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3076 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3129

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3130 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3184

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3185 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3244

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3245 G-LEGQKITRVACGSSHSVA 3263



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG          
Sbjct: 3963 ESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCD-R 4021

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4022 PRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4079

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4130

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4131 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4190

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4191 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4249

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4250 SAHTLAWSTSKPTSAG 4265



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3011 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3070

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3071 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3128

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3129 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3185

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3186 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3234

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3235 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3266



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 132/294 (44%), Gaps = 28/294 (9%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 435 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 493

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+AIT +GELY WG+ +  +L  G+ A   I I            K   + F Q++A   
Sbjct: 494 SAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  + 
Sbjct: 554 NGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E+++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           GSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 665 GSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 707



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 143/321 (44%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  GCVY    N             +L P  + GL
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYTQAYN-----------SDTLAPQLVQGL 421

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 422 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 477

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G   RL HG         RS      
Sbjct: 478 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHG---------RSAMNEIL 525

Query: 230 RLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            +I  L+  K    + G  F  +    ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 526 IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 585

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 586 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 644

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 645 VAAGSTHCLALTEDSEVHSWG 665



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2893 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2950

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVK-----KVAVHSGGR-HATALTV 3004

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3005 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3064

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3065 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3119

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3120 GDF--------GKLGRGGSEG------CNVPQNIERLNGQGVCQIECGAQFSLAL 3160



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPI--------------------------------- 167
            G +Y WG N  GQLG G + AKV +P                                  
Sbjct: 3892 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3950

Query: 168  -----------------PTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                             PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3951 YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4010

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSAC+   G +Y +G     
Sbjct: 4011 LGHGSRSPC---------DRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4061

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4062 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4121

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4122 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4168

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4169 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4200



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 450 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 508

Query: 98  NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTG--YHHSSAITVDGELYMWGKNSNGQ 154
            ++ +L    +    +  + ISGL +++ +  S G  +  + A   +G+++ WG    G+
Sbjct: 509 GNYXRLDHGRSAMNEIL-IMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 568 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 625

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 626 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 665



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 560 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 619

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 620 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 671


>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6 [Sarcophilus harrisii]
          Length = 1032

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 163/348 (46%), Gaps = 37/348 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL-----KALACGGAHTLFLTETGCVYATGL 97
           WG+  + +LG+ +   R  P V    E  SL        ACG  H+L L   G V++ G 
Sbjct: 5   WGDNSFRQLGINA-GRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGN 63

Query: 98  NDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N +GQLG  +NI  S  P  I  L+ + VV +S G  HS AI   G +Y WG  S GQLG
Sbjct: 64  NSYGQLG-RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLG 122

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           + K+      IP  +  LS     Q + G   S+A+T  GKV SWG    G+LG G    
Sbjct: 123 I-KEVKDQCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGLGT--- 178

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                   S+ +P+ +  L+G+ +   AAG  HS  +  +G  Y +G R  +  L   G 
Sbjct: 179 -----NFPSQASPQRVNSLDGIPLAQVAAGGSHSFALSLSGTSYGWG-RNKEGQLALSGK 232

Query: 277 HARRPSLISKLPY-SEEVVCGGYHTCVLTSG-------------GELYTWGSNENGCLGI 322
           +A   S+   + + +E + C   ++     G             G++ T+GSN +G LG 
Sbjct: 233 NASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNSGQLGH 292

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWGG 368
           G I     P+ V+   S     Q++CG  HT A   + G++L++G G 
Sbjct: 293 GLITKPRGPQIVE---SAELFSQIACGSHHTLAYACTSGQVLSFGCGS 337



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 149/347 (42%), Gaps = 48/347 (13%)

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLK------KEVVQISTGYHHSSAITVDGELYM 146
           Y  G N F QLGI  N G    P  +   +      +++VQ + G  HS  +  DG ++ 
Sbjct: 3   YCWGDNSFRQLGI--NAGRRASPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWS 60

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G NS GQLG  +K  K    P  ++ L        + G E S+A+   G++ SWG+G  
Sbjct: 61  CGNNSYGQLG--RKNIKKSKRPAPIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSR 118

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG  +               P+ I  L   K+   + G  HS  + ++G+V+ +GD  
Sbjct: 119 GQLGIKEVKDQCSI--------PKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDND 170

Query: 267 VDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
             ++     F      +R + +  +P + +V  GG H+  L+  G  Y WG N+ G L +
Sbjct: 171 HGQLGLGTNFPSQASPQRVNSLDGIPLA-QVAAGGSHSFALSLSGTSYGWGRNKEGQLAL 229

Query: 323 G-------SID--VLHSPERVQGPFSES--PVDQVSCGWKHTAAISEGKILTWGWGGSHG 371
                   SI+  + H  E +    S S      +      +  I++GK+LT+G   S  
Sbjct: 230 SGKNASVVSINYCIWHEAEALTCKRSNSIKEFQGLKELLNRSRQIADGKVLTFGSNNS-- 287

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                     GQLGHG       P IV   E     Q++CG +HT A
Sbjct: 288 ----------GQLGHGLITKPRGPQIVESAELFS--QIACGSHHTLA 322



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 21/201 (10%)

Query: 228 TPRLIKELEGV-----KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +PR+++  EG      ++  AA G  HS  +  +G V+  G+ +  ++  +    ++RP+
Sbjct: 22  SPRVVRCREGASLGGQQIVQAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPA 81

Query: 283 LISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
            I  L       V CG  H+  +   G +Y+WGS   G LGI  +    S  +     S 
Sbjct: 82  PIQALETQVVVSVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSR 141

Query: 341 SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHG-NDVDYIHPTIV 398
             + QVSCG  H+ A+++ GK+ +WG         ++ H   GQLG G N      P  V
Sbjct: 142 DKIIQVSCGHYHSIALTQDGKVFSWG---------DNDH---GQLGLGTNFPSQASPQRV 189

Query: 399 NFGENVKALQVSCGFNHTGAL 419
           N  + +   QV+ G +H+ AL
Sbjct: 190 NSLDGIPLAQVAAGGSHSFAL 210



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 15/132 (11%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
           +  CG  H+ +L + G +++ G+N  G LG  +I     P  +Q       V  VSCG +
Sbjct: 41  QAACGERHSLLLLADGTVWSCGNNSYGQLGRKNIKKSKRPAPIQA-LETQVVVSVSCGKE 99

Query: 352 HTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQV 409
           H+ AI + G+I +WG G            S GQLG     D    P  +      K +QV
Sbjct: 100 HSLAICKTGRIYSWGSG------------SRGQLGIKEVKDQCSIPKNIAALSRDKIIQV 147

Query: 410 SCGFNHTGALLE 421
           SCG  H+ AL +
Sbjct: 148 SCGHYHSIALTQ 159


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 173/393 (44%), Gaps = 43/393 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGLND 99
           +G   YG L LG    R  P+ V      H  + +  ACG   T  L E G VY  G ND
Sbjct: 36  FGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCGYND 95

Query: 100 FGQ--LGISENIGYSLEPLRIS-GLK-KEVVQISTGY--HHSSAITVDGELYMWGKNSNG 153
            GQ  +G +E +      LR S GL     V+I +G    H +A+  +G LY  G N  G
Sbjct: 96  SGQCAIGTTERV----PTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFNMRG 151

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLGLG  ++  +   T VE L+G         +  +  V   G + + G    G+LG G 
Sbjct: 152 QLGLG--SSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGD 209

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LF 272
             +         E  PR ++      V   A G  ++     +G V  FG     ++ L 
Sbjct: 210 HRN--------GELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLD 261

Query: 273 QEGNHARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                  +P+ ++  P    VV    CG +HT V+T  G +YT+G N+ G LG+G    +
Sbjct: 262 STSEPVSQPTRLAA-PLDRLVVPQLSCGYHHTAVVTEDGAVYTFGRNDYGQLGLGHKMHM 320

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             P RV+   +   + QV+CG  HT  +S +GK+  +            G ++ GQLG  
Sbjct: 321 ARPARVES-LARMRITQVACGCYHTLVLSDDGKVFPF------------GRNNHGQLGLE 367

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
             VD + P +++   N    +V+ GF H+  L+
Sbjct: 368 TSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLV 400



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 22/304 (7%)

Query: 29  RWISSTLQRRFAALWGNGDY--------GRLGLGSLESRWRPVVCSAFEKHSLKALACGG 80
           R  S       AAL  NG+         G+LGLGS  +     +        +  + C  
Sbjct: 123 RIFSGNGSEHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSY 182

Query: 81  AHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAIT 139
            HT  + + G +YA G ND+GQLG+ ++    L P  +    ++ V+ ++ G H++ A  
Sbjct: 183 FHTAIVMDNGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTIASL 242

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKV 198
            DG +  +GKN +GQLGL    ++ +  PT++   L  +   Q + G+  +  VT  G V
Sbjct: 243 RDGGVVAFGKNDHGQLGL-DSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAV 301

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            ++G    G+LG G +  +           P  ++ L  +++   A G  H+  + ++G+
Sbjct: 302 YTFGRNDYGQLGLGHKMHMA---------RPARVESLARMRITQVACGCYHTLVLSDDGK 352

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNE 316
           V+ FG     ++  +       P LIS L      +V  G YH+  L    E  T  +  
Sbjct: 353 VFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCLVGPTEGETPPAQG 412

Query: 317 NGCL 320
           +G L
Sbjct: 413 SGTL 416



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/344 (24%), Positives = 133/344 (38%), Gaps = 80/344 (23%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVT 193
           S  + V+G +Y +G+N+ G+L LG    +  PI   +     G      A G EQ+  + 
Sbjct: 25  SDVLEVEG-VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILF 83

Query: 194 GGGKVLSWGAGGSGRLGHGQESSI------------------------------------ 217
             G V + G   SG+   G    +                                    
Sbjct: 84  EDGDVYTCGYNDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLY 143

Query: 218 ---------LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------- 261
                    LG   ST+     L++EL G +V      + H+A + +NG +Y        
Sbjct: 144 TVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDNGDLYACGCNDYG 203

Query: 262 ---FGDRAVDKMLFQEGNH-ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
               GD    +++ +   +  RRP L         V CG ++T      G +  +G N++
Sbjct: 204 QLGLGDHRNGELVPRPVEYFFRRPVL--------AVACGQHYTIASLRDGGVVAFGKNDH 255

Query: 318 GCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSE 375
           G LG+ S  + +  P R+  P     V Q+SCG+ HTA ++E G + T+           
Sbjct: 256 GQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHHTAVVTEDGAVYTF----------- 304

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G +  GQLG G+ +    P  V     ++  QV+CG  HT  L
Sbjct: 305 -GRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVL 347



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 23/148 (15%)

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           NH RR           +V CG   T +L   G++YT G N++G   IG+ + + +     
Sbjct: 64  NHGRR---------VVDVACGNEQTAILFEDGDVYTCGYNDSGQCAIGTTERVPTLRFSP 114

Query: 336 GPFSESPVDQVS-CGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           G  S   V   S  G +H AA+ + G + T G+            +  GQLG G+    +
Sbjct: 115 GLSSNRTVRIFSGNGSEHLAALHANGNLYTVGF------------NMRGQLGLGSSTTVM 162

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLE 421
             T+V      +   V C + HT  +++
Sbjct: 163 EATLVEELAGKRVADVGCSYFHTAIVMD 190


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 182/409 (44%), Gaps = 59/409 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAQQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           P++V     E  + QVSCG  H+ A++ +G+I ++G  G H           G+LG+G  
Sbjct: 293 PQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDH-----------GRLGYGRK 339

Query: 390 VD---------YIHPTIVNFGENVK-------ALQVSCGFNHTGALLEY 422
           V          +I P    F    +       A  V+CG  HT A++E+
Sbjct: 340 VTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 133/328 (40%), Gaps = 17/328 (5%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V A G  + GQLG+  +    L  +  +     V  +  G  +S AI  DG+L+ WG N 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            G LG      K    P+ V+ L+ +   QAA+G    +AV   G+  +WG    G+ G 
Sbjct: 67  RGTLGH-PPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                  G         P+   +   + V+  AAG  HS  +   G V+ +G       +
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAQQ--LTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI 183

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G       P
Sbjct: 184 KQ----ISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYP 239

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             VQG    + VD  + GW  TA  +EG++  WG  G HG             G  +   
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLG---------FGDNDKSS 289

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + P  VN       +QVSCG  H+ AL
Sbjct: 290 KMLPQKVNLLAGEDIIQVSCGGTHSVAL 317


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3278



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3286

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 176/388 (45%), Gaps = 40/388 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGS-NENGCLGIGSIDVLHSP 331
             +  + P  I  L      +V CG   +  LT  G +YTW    +   LG GS D +  P
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRP 4246

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             +VQG      V  ++ G  H    +E G++ TWG             +  GQLG G   
Sbjct: 4247 RQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWG------------DNDEGQLGDGTTN 4293

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P +V   +  K  +V+CG  HT A
Sbjct: 4294 AIQRPRLVAALQGKKINRVACGSAHTLA 4321



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 141/314 (44%), Gaps = 25/314 (7%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ IT  G+L+ WGK   G+LG G    ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVY---IFGDRAVDKMLFQEGNHARRPSLISKLP 288
            I  L G+ V     G   S  + ++G VY   +F D    ++     +H RRP  +  L 
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRD--YHRLGHGSDDHVRRPRQVQGLQ 4253

Query: 289  YSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
              +   +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V
Sbjct: 4254 GKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRV 4312

Query: 347  SCGWKHTAAISEGK 360
            +CG  HT A S  K
Sbjct: 4313 ACGSAHTLAWSTSK 4326



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3182

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3183 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 150/335 (44%), Gaps = 32/335 (9%)

Query: 89   TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
            +G +Y  G N  GQLG  E     + P     L     VQ+  G     A+T DG+LY  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKV-PTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 148  GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGG 205
            G  + G+  LG    + +  PT +E +  +F K+ A+  G +  +A++  G+V SWG   
Sbjct: 4015 GYGAGGR--LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAE 4072

Query: 206  SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             G+LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G  
Sbjct: 4073 DGKLGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 266  AVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLG 321
               ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLG 4183

Query: 322  IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSS 380
             G  D    P ++    +   V +V CG + + A+++ G + TW           D H  
Sbjct: 4184 RGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTW-------QVFRDYH-- 4233

Query: 381  GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
              +LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 --RLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E +  P++ +  +   +  ++CG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  ++V++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 138/319 (43%), Gaps = 46/319 (14%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQ++        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 490

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P++
Sbjct: 491 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKM 541

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 542 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 601

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  +
Sbjct: 602 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDI 660

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +V CG + + A++ +G++ TWG G +             +LGHG +    +P ++   +
Sbjct: 661 VKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHVRYPKLLEGLK 708

Query: 403 NVKALQVSCGFNHTGALLE 421
             K + V+ G  H  AL E
Sbjct: 709 GKKVIDVAAGSTHCLALTE 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GLK K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 3222 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3281

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP +V  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3282 NGRLGLGLSSGTV-PIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3340

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3341 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3392 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3451

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3452 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3498

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3499 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3535



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 4216 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4273

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4274 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4331

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4332 HGNRSP--CDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4386

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4387 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4441 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4500

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4501 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4547

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4548 IQRPRLVAALQGKKVNRVACGSAHTLA 4574



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 3260 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3319

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3320 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3377

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3378 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3428

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3429 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3488

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3489 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3543

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V+  E  K  +V+CG +H+ A
Sbjct: 3544 -----DNDH---GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80   GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
            G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 765  GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISTFSGKQAGKHVVHIACGSTY 823

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
            S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 824  SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 881

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
            T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 882  TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 932

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 933  LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 992

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
            +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 993  SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 1037



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4282 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4340

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EV  ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4341 PRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4398

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4399 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4449

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4450 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4509

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4510 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4568

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4569 SAHTLAWSTSKPASAG 4584



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3332 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3391

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3392 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3449

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3450 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3506

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3507 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3555

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3556 TVNRKPTLVHGLEGQKITRVACGSSHSVAWTT 3587



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 751

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 752 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISTFSG 807

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 808 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 855

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 856 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 916 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 974

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 975 VAAGSTHCLALTEDSEVHSWG 995



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVK-----KVAVHSGGR-HATALTV 3325

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3326 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3385

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3386 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3440

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3441 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3481



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V S F      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 780 WGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 838

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 839 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 897

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 898 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 955

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 956 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 995



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 4211 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4269

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4270 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4329

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4330 LGHGNRSPC---------DRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYG 4380

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4381 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4440

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4441 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4487

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4488 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4519



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 836 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 895

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 896 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 954

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 955 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 997



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 769 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISTFSGKQAGKHVVHIAC 819

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 820 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 879

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 880 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 938

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 939 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 986

Query: 421 E 421
           E
Sbjct: 987 E 987



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 890  WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 949

Query: 103  L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 950  LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 1006

Query: 160  KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
            +  K  P PT    L G+ TK     A G  QS A
Sbjct: 1007 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 1036



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G    AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 709 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQ-GLASR--NIVKIAAHSD- 764

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 765 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACG 820

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 821 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 868

Query: 409 VSCG 412
           V+CG
Sbjct: 869 VACG 872


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 54/389 (13%)

Query: 55  SLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENI 109
           SL S+   ++  A E      +  +ACGG H + +T  G +++ G    G+LG  +  ++
Sbjct: 271 SLNSKLDALLPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV 330

Query: 110 GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPI 167
            +      +SG   E+V  + G +H+ A+T+ G+LY WG  ++  G LG G + +  IP 
Sbjct: 331 SHPKIIDTLSGTNVELV--ACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQ 388

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
               + + GI     + G   +  VT  G++ ++G G  G LGHG           TS +
Sbjct: 389 KVGGQ-MEGIRVSYISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHI--------TSNF 439

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE---------------NGRVYIFGDRAVDKMLF 272
            PR ++ L G++    A G  H+A   E               + ++Y +GD   DK   
Sbjct: 440 -PREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDG--DKGRL 496

Query: 273 QEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
             G++  R  P  ++ L      +V CG   T  LT+ G +YT GS   G LG  + +  
Sbjct: 497 GHGDNEPRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQLGSATANG- 555

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
             P  V+G  + S V++V+CG  H A + S+ ++ TWG G              GQLGHG
Sbjct: 556 KLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKG------------LNGQLGHG 603

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           ++     PTIV+  ++ +   V+CG   T
Sbjct: 604 DNNHRNTPTIVDVLKDKQVKNVACGSKFT 632



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 145/342 (42%), Gaps = 48/342 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +       +++ +ACG  HT  +T +G +Y    G +++
Sbjct: 314 WGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNY 373

Query: 101 GQLG--------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           G LG        I + +G  +E +R+S        IS G  H++ +T  G+L+ +G  S 
Sbjct: 374 GLLGHGSEVSHWIPQKVGGQMEGIRVS-------YISCGAWHTAVVTSAGQLFTFGDGSF 426

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGK 197
           G LG G         P +VE L G+ T + A G   + A                    K
Sbjct: 427 GALGHGDHITS--NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRK 484

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           + +WG G  GRLGHG     L          P  +  L   ++   A G   +  +   G
Sbjct: 485 LYTWGDGDKGRLGHGDNEPRL---------VPECVAALIEERICQVACGNDLTVALTTAG 535

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
           RVY  G  A  ++     N  + P+ +       + EEV CG YH  VLTS  E+YTWG 
Sbjct: 536 RVYTMGSTAYGQLGSATAN-GKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGK 594

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             NG LG G  +  ++P  V     +  V  V+CG K T  I
Sbjct: 595 GLNGQLGHGDNNHRNTPTIVD-VLKDKQVKNVACGSKFTVVI 635



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 118/277 (42%), Gaps = 49/277 (17%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +     A G   +V VT  G++ SWG    GRLGHG E+ +         
Sbjct: 280 LPKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADV--------- 330

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P++I  L G  V++ A G  H+  +  +G +Y +GD   +  L   G+      P  +
Sbjct: 331 SHPKIIDTLSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKV 390

Query: 285 S------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
                  ++ Y   + CG +HT V+TS G+L+T+G    G LG G     + P  V+   
Sbjct: 391 GGQMEGIRVSY---ISCGAWHTAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVE-TL 446

Query: 339 SESPVDQVSCGWKHTAAISEG----------------KILTWGWGGSHGTFSEDGHSSGG 382
                 +V+CG  HTAA  E                 K+ TWG G              G
Sbjct: 447 RGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDK------------G 494

Query: 383 QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +LGHG++   + P  V      +  QV+CG + T AL
Sbjct: 495 RLGHGDNEPRLVPECVAALIEERICQVACGNDLTVAL 531



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+  +   G ++ +G+ +  ++          P +I  L 
Sbjct: 281 PKALESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLS 340

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            +  E V CG YHTC +T  G+LYTWG  ++  G LG GS +V H  P++V G      V
Sbjct: 341 GTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGS-EVSHWIPQKVGGQMEGIRV 399

Query: 344 DQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             +SCG  HTA + S G++ T+G G            S G LGHG+ +    P  V    
Sbjct: 400 SYISCGAWHTAVVTSAGQLFTFGDG------------SFGALGHGDHITSNFPREVETLR 447

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++  +V+CG  HT A +E +
Sbjct: 448 GLRTTKVACGVWHTAAAVEAI 468


>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
          Length = 12743

 Score =  117 bits (293), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 105/360 (29%), Positives = 169/360 (46%), Gaps = 37/360 (10%)

Query: 43    WGNGDYGRLGLG--SLESRWRPVVC--SAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
             WGN  Y  LG+   S+  R +P +   SA +  S+ +LA    H L L +   V+  G+N
Sbjct: 12218 WGNNGYASLGVSDTSIYQRSKPGLANISAIQPASIISLA-SYYHVLALDDKNRVWGWGMN 12276

Query: 99    DFGQLG--ISENIGYS-----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
               GQLG    +N  Y+     L  LR      +++ IS GY HS A+   G ++ WG NS
Sbjct: 12277 WSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGSNS 12336

Query: 152   NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             +GQLG       ++PI   +  L+G     A      ++A+   G++ +WG    GRLG+
Sbjct: 12337 SGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRLGN 12396

Query: 212   GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
             G   S L    +T +        L   KV     G  H   +D+ G+V+ +G+ +  ++ 
Sbjct: 12397 GSSGSYLYLPTATDQ------SALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQL- 12449

Query: 272   FQEGNHARRPSLIS-KLPYS-------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                GN +   SL+  K+  S       + V  G  ++ +L   G ++TWG N+ G LG G
Sbjct: 12450 ---GNGSTANSLVPVKVNLSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSLGTG 12506

Query: 324   SIDVLHSPERV-QGPFSESPVDQVSCGWK-HTAAISEG-KILTWGWGGSHGTFSEDGHSS 380
             +   L++P  + Q  F+ + +  +  G   H  A+ E   + TWG+GG    + E G+ S
Sbjct: 12507 NRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGG----YGEMGNGS 12562



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 84/319 (26%), Positives = 141/319 (44%), Gaps = 26/319 (8%)

Query: 43    WGNGDYGRLGLGSLES-RWRPVVCSAFEKHSLK------ALACGGAHTLFLTETGCVYAT 95
             WG    G+LG G+ ++ R+ PV     +  S++      A++ G  H+L L   G V+A 
Sbjct: 12273 WGMNWSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAW 12332

Query: 96    GLNDFGQLGISENIGYSLEPLRIS----GLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
             G N  GQLG + N   SL P+ +        K V   +T Y  + A+   G+L+ WG N 
Sbjct: 12333 GSNSSGQLG-TNNTQRSLVPILVDLSPLAGAKVVAAKATDYF-NMALDESGQLWAWGDNR 12390

Query: 152   NGQLGLGKKAAKV-IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              G+LG G   + + +P  T    LS        +G    +A+   G+V +WG    G+LG
Sbjct: 12391 YGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQVWAWGNNSYGQLG 12450

Query: 211   HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
             +G  ++ L  ++         +  LEGV V+    G  +S  +D+ GR++ +G      +
Sbjct: 12451 NGSTANSLVPVKVN-------LSALEGVGVQSVEVGNRYSMLLDKLGRIWTWGYNDYGSL 12503

Query: 271   LFQEGNHARRPSLISKLPYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
                       P+LI +  ++  V+        +H   +     ++TWG    G +G GS 
Sbjct: 12504 GTGNRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESNNVWTWGYGGYGEMGNGSY 12563

Query: 326   DVLHSPERVQGPFSESPVD 344
                  P  V+ P   +P +
Sbjct: 12564 SNSLLPIPVRIPVPSTPFE 12582



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/163 (30%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 18    IKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVC--SAFEKHSLKA 75
             I++G  L    R+ +          WG    G LG+G+ + ++ PV+   SA +  S+ A
Sbjct: 10933 IEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINA 10992

Query: 76    LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLRISGLKK-EVVQISTGYH 133
             LA G A +L L + G +++ GLN++GQLGI     +S  + + +S L    +V I    H
Sbjct: 10993 LAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADH 11052

Query: 134   HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
             ++ A+  +G ++ WG+N  GQLG+     +++P+   +  L G
Sbjct: 11053 YAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGG 11095



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 28/288 (9%)

Query: 69    EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLKKE 124
             E   +++      H L L   G V+A G N  GQLG     +  +   ++P    G    
Sbjct: 11721 EGVKIESFVSSNDHYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIV 11780

Query: 125   VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAA 183
              +    G+  S A+   G+L+ WG N  GQLG+     +  IP+P  +  L G   K   
Sbjct: 11781 AIAAGEGF--SLALDDKGQLWAWGINDRGQLGVASTIYRSTIPVPADMSALGGTRIKTLQ 11838

Query: 184   LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK--ELEGVKVK 241
                +Q   +   G++ +WGA    R+G          + S S Y P  +   E+ G K  
Sbjct: 11839 AAGDQGYLLDELGRLWAWGA----RVGDWTG------MDSESAYAPVQVDLAEVSGGKAL 11888

Query: 242   IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ--EGNHARRPSLISKLPYSE-------E 292
               +AG  +   +DEN +V++ G+           +G +      ++++  S         
Sbjct: 11889 QMSAGNNYLLMLDENNQVWVLGNANNYSASSSSADGENNSDNPFLNRVDLSSLGDKSAIS 11948

Query: 293   VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
             +  G +H  +L   G +++WG N NG LG+  +    +P  V   +SE
Sbjct: 11949 ISAGSHHDLLLDDEGGIWSWGYNYNGELGVDGVYQTSTPIFVAKLYSE 11996



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 86/336 (25%), Positives = 134/336 (39%), Gaps = 61/336 (18%)

Query: 111   YSLEPL---RISGLKKEVVQISTGY------------HHSSAITVDGELYMWGKNSNGQL 155
             Y+LEPL    IS    E+V+  T               + S + V   L+ WG N    L
Sbjct: 12167 YALEPLGHVEISNASMELVETKTLRCPRDDVKPFSVGSNFSLVAVGNTLWSWGNNGYASL 12226

Query: 156   GLGKKAAKVIPIPTKVECLSGIFTKQAA-----LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             G+   +      P     L+ I   Q A       +   +A+    +V  WG   SG+LG
Sbjct: 12227 GVSDTSIYQRSKPG----LANISAIQPASIISLASYYHVLALDDKNRVWGWGMNWSGQLG 12282

Query: 211   HGQESSILGFLRSTSEYTP-----RLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGD 264
              G   +        + Y P       ++ +E     IA +AG+ HS  +D  GRV+ +G 
Sbjct: 12283 DGTYDN--------NRYAPVKTDLSQLRSMEDSADIIAISAGYGHSLALDSLGRVWAWGS 12334

Query: 265   RAVDKMLFQEGNHARRPSLISKLPYSEEVVCG----GYHTCVLTSGGELYTWGSNENGCL 320
              +  ++       +  P L+   P +   V       Y    L   G+L+ WG N  G L
Sbjct: 12335 NSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDYFNMALDESGQLWAWGDNRYGRL 12394

Query: 321   GIGSI-DVLHSPERV-QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
             G GS    L+ P    Q   S + V     G  H  A+ + G++  W WG          
Sbjct: 12395 GNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQV--WAWG---------- 12442

Query: 378   HSSGGQLGHGNDVDYIHPTIVNF----GENVKALQV 409
             ++S GQLG+G+  + + P  VN     G  V++++V
Sbjct: 12443 NNSYGQLGNGSTANSLVPVKVNLSALEGVGVQSVEV 12478



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 121   LKKEVVQISTGYH----HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
             +K  V+++    H    + + +  +  L+ WG+NSNG+LG+G    +  P+ T +  L G
Sbjct: 10928 VKLHVIEVGKSLHAVGRYHTLLWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDG 10987

Query: 177   IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
                   A G   S+A+   G++ SWG    G+LG G  S+        S      +  L 
Sbjct: 10988 ASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAF-------SRPQEVDLSNLM 11040

Query: 237   GVKVKIAAAGFLHSACIDENGRVYIFG 263
             G ++    A   ++  +DENG V+ +G
Sbjct: 11041 GFRIVNIVAADHYAFALDENGNVWSWG 11067



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 5/125 (4%)

Query: 94    ATGLNDFGQLGIS----ENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWG 148
             ATG     QL +S    +   Y +EP+  + L    + +++T   H+ AI   G+L+ WG
Sbjct: 11310 ATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWG 11369

Query: 149   KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
             KN+ GQLG G       P+         +     A+G + S+A+   G V SWG   SG 
Sbjct: 11370 KNTYGQLGNGSYDDITAPLTQDFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGE 11429

Query: 209   LGHGQ 213
             LG G 
Sbjct: 11430 LGQGH 11434



 Score = 49.3 bits (116), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/136 (31%), Positives = 59/136 (43%), Gaps = 3/136 (2%)

Query: 77    ACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
             A G  HTL L     ++A G N  G+LGI      Y+     IS L    +  ++ G   
Sbjct: 10941 AVGRYHTL-LWANDILWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAF 10999

Query: 135   SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
             S A+   G L+ WG N+ GQLG+G  +A   P    +  L G            + A+  
Sbjct: 11000 SLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDE 11059

Query: 195   GGKVLSWGAGGSGRLG 210
              G V SWG    G+LG
Sbjct: 11060 NGNVWSWGRNDLGQLG 11075



 Score = 45.4 bits (106), Expect = 0.056,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 9/115 (7%)

Query: 62    PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS--LEPLRIS 119
             PV  +  +  +L  +A   AH L +   G +++ G N +GQLG   N  Y     PL   
Sbjct: 11335 PVAYAQLDGVALSRVATNTAHNLAIDGQGKLWSWGKNTYGQLG---NGSYDDITAPLTQD 11391

Query: 120   GLKKEVV---QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
                K+ V    ++ G   S AI   G+++ WG N++G+LG G  +   +PIP  +
Sbjct: 11392 FSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG-HSDWAVPIPVSI 11445



 Score = 41.6 bits (96), Expect = 0.85,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 15/130 (11%)

Query: 200   SWGAGGSGRLGHGQESSILGFLRSTSEYTPRL--IKELEGVKVKIAAAGFLHSACIDENG 257
             +WG   +G LG G             +Y P +  I  L+G  +   AAG   S  +D+ G
Sbjct: 10957 AWGRNSNGELGIGNWQD---------QYAPVMTDISALDGASINALAAGDAFSLALDDRG 11007

Query: 258   RVYIFGDRAVDKMLFQEGNHARRPSLI--SKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
             R++ +G     ++     +   RP  +  S L       +V   ++   L   G +++WG
Sbjct: 11008 RLWSWGLNNYGQLGIGSTSAFSRPQEVDLSNLMGFRIVNIVAADHYAFALDENGNVWSWG 11067

Query: 314   SNENGCLGIG 323
              N+ G LGI 
Sbjct: 11068 RNDLGQLGIA 11077


>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1193

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 163/374 (43%), Gaps = 58/374 (15%)

Query: 40   AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL---------ACGGAHTLFLTETG 90
            A  WG+  YGRLG G+   R  PV+    ++ +   L         + G  ++L +   G
Sbjct: 696  AYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYSLAVGSDG 755

Query: 91   CVYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITV 140
             VYA G N +GQLG + +   S  P+R+           GLK   +Q+S G +HS A+  
Sbjct: 756  YVYAWGYNSYGQLG-NNSTSSSYVPVRVRDPASPNDASKGLK--AIQVSAGDYHSLALGS 812

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKV-----ECLSGIFTKQAALGFEQSVAVTGG 195
            DG  Y WG  S G+LG   +++  +P+  +      +   G+   Q + G   S+AV   
Sbjct: 813  DGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHSLAVGSD 872

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            G   +WG G  G+LG+   SS    +R     +P      +G+K    +AG+ HS  +  
Sbjct: 873  GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASP--TDTSKGLKAAQISAGYGHSLAVGS 930

Query: 256  NGRVYIFGDRAVDKMLFQEG-------------NHARRPSLISKLPYSEEVVCGGYHTCV 302
            +G  Y +G   ++    Q G                  PS  SK   + +V  G  H+  
Sbjct: 931  DGYAYAWG---LNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLKATQVSAGQEHSLA 987

Query: 303  LTSGGELYTWGSNENGCLGIG--------SIDVLHSPERVQ--GPFSESPVDQVSCGWKH 352
            +   G  Y WG N+NG LGI          + VL S +     GP+  +   Q++ G  H
Sbjct: 988  VDKDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRA--VQITAGDHH 1045

Query: 353  TAAI-SEGKILTWG 365
            + AI ++G    WG
Sbjct: 1046 SLAIGTDGNTKAWG 1059



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 147/340 (43%), Gaps = 43/340 (12%)

Query: 39   FAALWGNGDYGRLGLGSLESRWRPV-----VCSAFEKHSLKAL--ACGGAHTLFLTETGC 91
            +   WG   YG+LG  S  S + PV              LKA+  + G  H+L L   G 
Sbjct: 756  YVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSLALGSDGY 815

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRI----------SGLKKEVVQISTGYHHSSAITVD 141
             YA G   +G+LG + +   S  P+R+           GLK    Q+S G +HS A+  D
Sbjct: 816  AYAWGDGSYGKLG-NNSRSSSYVPVRVRDPDSPNDASKGLK--ATQVSAGQNHSLAVGSD 872

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPI-----PTKVECLSGIFTKQAALGFEQSVAVTGGG 196
            G  Y WG  S G+LG    ++  +P+      +  +   G+   Q + G+  S+AV   G
Sbjct: 873  GYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSLAVGSDG 932

Query: 197  KVLSWGAGGS-GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
               +WG      +LG+   S+    +R     +P      +G+K    +AG  HS  +D+
Sbjct: 933  YAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPS--DASKGLKATQVSAGQEHSLAVDK 990

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------------EVVCGGYHTCVL 303
            +G  Y +GD   +  L  +G+    P  +  L  ++            ++  G +H+  +
Sbjct: 991  DGNAYAWGDND-NGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWMRAVQITAGDHHSLAI 1049

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             + G    WGSN +G LG G+ +   +P  V   F+  PV
Sbjct: 1050 GTDGNTKAWGSNRDGRLGDGTTNTKWAPVPVA--FNLQPV 1087



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 112/263 (42%), Gaps = 37/263 (14%)

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTK------VECLSGIFT-KQAAL 184
           Y  S A+  DG  Y WG NS G+LG G    +  P+  K         L   FT  Q + 
Sbjct: 684 YGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSA 743

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S+AV   G V +WG    G+LG+   SS    +R     +P      +G+K    +
Sbjct: 744 GDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPN--DASKGLKAIQVS 801

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-------------RPSLISKLPYSE 291
           AG  HS  +  +G  Y +GD +  K+    GN++R              P+  SK   + 
Sbjct: 802 AGDYHSLALGSDGYAYAWGDGSYGKL----GNNSRSSSYVPVRVRDPDSPNDASKGLKAT 857

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD------- 344
           +V  G  H+  + S G  Y WG    G LG  S      P RV+ P   SP D       
Sbjct: 858 QVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDP--ASPTDTSKGLKA 915

Query: 345 -QVSCGWKHTAAI-SEGKILTWG 365
            Q+S G+ H+ A+ S+G    WG
Sbjct: 916 AQISAGYGHSLAVGSDGYAYAWG 938


>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
           CCMP2712]
          Length = 312

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 148/307 (48%), Gaps = 20/307 (6%)

Query: 66  SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLK-K 123
           S    H +  +A GG HTLFLT+ G V A G ND  QLG   E      EP ++S L+ K
Sbjct: 1   SLLAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWK 60

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
            VV+++ G  H+    +DG +Y WG  S+G+LGLG    K +P P KV  L        A
Sbjct: 61  RVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGN--FKSVPQPCKVSGLGEERCVSVA 118

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKI 242
            G+  S AV  GGK+ +WG G  G+LG G+  S            P  ++E   G + + 
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCC---------EPVQVEEPGNGQRWRA 169

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHT 300
              G  HS  + + G ++ +G     ++   +     RP  IS+L  ++     CG    
Sbjct: 170 VRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFN 229

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQVSCGWKHTAAIS-E 358
             +++G ++++WG+N  G LG G  D +   E      S  P V  VSCG +H   +  +
Sbjct: 230 VAISNGSQVFSWGNNRYGQLGHG--DKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRK 287

Query: 359 GKILTWG 365
           G+I  WG
Sbjct: 288 GRIWAWG 294



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 126/269 (46%), Gaps = 24/269 (8%)

Query: 59  RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI 118
           RW+ VV           +ACG AH L     G VY+ GL   G+LG+  N     +P ++
Sbjct: 58  RWKRVV----------EMACGDAHNLVRCLDGSVYSWGLGSSGRLGLG-NFKSVPQPCKV 106

Query: 119 SGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           SGL +E  V ++ GY+HS A+   G+L+ WG  + GQLG GK  +   P+  + E  +G 
Sbjct: 107 SGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVE-EPGNGQ 165

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             +    G   S+ +T  G + SWG    G+LGHG E              P+ I EL G
Sbjct: 166 RWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDEERC---------GRPKGISELVG 216

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVC 295
            K+   + G   +  I    +V+ +G+    ++   +       +L S    P    V C
Sbjct: 217 TKISCFSCGPNFNVAISNGSQVFSWGNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSC 276

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGS 324
           GG H   L   G ++ WG NE+GCLGIG 
Sbjct: 277 GGRHVLGLDRKGRIWAWGCNESGCLGIGD 305



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 26/296 (8%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VVQ++ G  H+  +T  G +   G+N   QLG G +  +  P P +V  L      + A 
Sbjct: 8   VVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAGPEPQQVSTLRWKRVVEMAC 67

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   ++     G V SWG G SGRLG       LG  +S  +  P  +  L   +    A
Sbjct: 68  GDAHNLVRCLDGSVYSWGLGSSGRLG-------LGNFKSVPQ--PCKVSGLGEERCVSVA 118

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE---VVCGGYHTC 301
           AG+ HS  + E G+++ +G+    ++   +      P  + +    +    V  G YH+ 
Sbjct: 119 AGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEYHSL 178

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-K 360
            +T  G L++WG N +G LG G  +    P+ +      + +   SCG     AIS G +
Sbjct: 179 GMTDVGSLWSWGLNNDGQLGHGDEERCGRPKGIS-ELVGTKISCFSCGPNFNVAISNGSQ 237

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           + +W            G++  GQLGHG+ V+ I  T+ +       L VSCG  H 
Sbjct: 238 VFSW------------GNNRYGQLGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHV 281



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 106/230 (46%), Gaps = 28/230 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLGLG+ +S  +P   S   +    ++A G  H+  + E G ++A G    GQ
Sbjct: 84  WGLGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQ 143

Query: 103 LGISENIGYSLEPLRIS--GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG  +      EP+++   G  +    +  G +HS  +T  G L+ WG N++GQLG G +
Sbjct: 144 LGTGK-FESCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLWSWGLNNDGQLGHGDE 202

Query: 161 AAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
                P      + TK+ C S         G   +VA++ G +V SWG    G+LGHG +
Sbjct: 203 ERCGRPKGISELVGTKISCFS--------CGPNFNVAISNGSQVFSWGNNRYGQLGHGDK 254

Query: 215 -SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              I   LRS S           G  V   + G  H   +D  GR++ +G
Sbjct: 255 VEQIEETLRSGS----------HGPLVLSVSCGGRHVLGLDRKGRIWAWG 294



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 103/248 (41%), Gaps = 20/248 (8%)

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
           L+G    Q A G + ++ +T  G+VL+ G     +LG G E    G         P+ + 
Sbjct: 3   LAGHHVVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGREAG-------PEPQQVS 55

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
            L   +V   A G  H+     +G VY +G  +  ++         +P  +S L      
Sbjct: 56  TLRWKRVVEMACGDAHNLVRCLDGSVYSWGLGSSGRLGLGNFKSVPQPCKVSGLGEERCV 115

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            V  G YH+  +  GG+L+ WG+   G LG G  +    P +V+ P +      V  G  
Sbjct: 116 SVAAGYYHSFAVMEGGKLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRAVRGGEY 175

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           H+  +++   L W WG      + D     GQLGHG++     P  ++     K    SC
Sbjct: 176 HSLGMTDVGSL-WSWG-----LNND-----GQLGHGDEERCGRPKGISELVGTKISCFSC 224

Query: 412 GFNHTGAL 419
           G N   A+
Sbjct: 225 GPNFNVAI 232



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  + G+LG G  E   RP   S      +   +CG    + ++    V++ G N +GQ
Sbjct: 189 WGLNNDGQLGHGDEERCGRPKGISELVGTKISCFSCGPNFNVAISNGSQVFSWGNNRYGQ 248

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  + +    E LR       V+ +S G  H   +   G ++ WG N +G LG+G    
Sbjct: 249 LGHGDKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNESGCLGIGDNIP 308

Query: 163 KVIP 166
           ++ P
Sbjct: 309 RLAP 312


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ S
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPS 226

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPSE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPSELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 321 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 208

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  +++   H  P  V  G   + +QV+CG  HT
Sbjct: 209 GELYTFG------------EPENGKLGLPSELLMNHRSPQRV-LGIPERVIQVACGGGHT 255

Query: 417 GALLEYV 423
             L E V
Sbjct: 256 VVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4312 SAHTLAWSTSK 4322



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4230

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 608

Query: 409 VSCG 412
           V+CG
Sbjct: 609 VACG 612


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 129/436 (29%), Positives = 186/436 (42%), Gaps = 88/436 (20%)

Query: 43  WGNGDYGRLG-LGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG    G LG  G +E  W P+   +     +K +A G  H+L LTE G V + GLND G
Sbjct: 572 WGANSDGVLGHTGGIEQLW-PLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQG 630

Query: 102 QLGI-------SENIGYSLEPLRI----SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           Q G        S ++     P  I       KK VV I+ G +HS+ +T DGELY +G+ 
Sbjct: 631 QCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRG 690

Query: 151 SNGQLG------LGK------------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
              QLG      LG+            + +   P PT++  L+G   KQ A G   S  V
Sbjct: 691 GEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACV 750

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI---AAAGFLH 249
           T  G + +WG G +G+LGHG           T + TP+ ++   G+K KI    A G  H
Sbjct: 751 TEEGALYTWGRGANGQLGHGD---------MTDQATPKRVE--AGIKDKIMVKVACGENH 799

Query: 250 SACIDENGRVYIFGDRAVDKM---------LFQEG-------NHARRPSLISKLPYSE-- 291
           SA +D  G +Y  G     ++            EG          R P+ +S L      
Sbjct: 800 SAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQ 859

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             ++ CG      +T+ G LYTWG  +   LG+G    +  P  +    S   V  V+CG
Sbjct: 860 FVDIACGHGFCAAITNRGLLYTWG--KGTALGLGPSGDVSEPTHLS---SIDGVVSVACG 914

Query: 350 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT---IVNFGE--N 403
             H AA+++ G++  W            G S  G+LG G   + +  T   +  F +   
Sbjct: 915 DIHAAALTDKGQLYMW------------GSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQ 962

Query: 404 VKALQVSCGFNHTGAL 419
            + L VS G  H  A+
Sbjct: 963 ARCLGVSIGPRHALAI 978



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 143/337 (42%), Gaps = 43/337 (12%)

Query: 58  SRWRPVVC-SAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG------------ 104
           +R RP+V      K ++ ++A GG H+  +T  G +Y  G     QLG            
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708

Query: 105 -------ISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG 156
                   ++   +  +P R+S L  +VV Q++ G  HS+ +T +G LY WG+ +NGQLG
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLG 768

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE-- 214
            G    +  P   +      I  K  A G   S AV   G + + G   SG+LG G E  
Sbjct: 769 HGDMTDQATPKRVEAGIKDKIMVK-VACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWI 827

Query: 215 -----SSILGFLRSTSEYTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAV 267
                    G   S  E  P  +  L    V+    A G    A I   G +Y +G +  
Sbjct: 828 CATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWG-KGT 886

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID- 326
              L   G+    P+ +S +     V CG  H   LT  G+LY WGS+E G LG G    
Sbjct: 887 ALGLGPSGD-VSEPTHLSSIDGVVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTE 945

Query: 327 -VLHSPERVQGPFSESPVDQVSC-----GWKHTAAIS 357
            V  +P+ V   F++  + Q  C     G +H  AIS
Sbjct: 946 GVTRTPKLVPA-FAD--IHQARCLGVSIGPRHALAIS 979



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 135/312 (43%), Gaps = 44/312 (14%)

Query: 105 ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
           IS+    SL  L  + LK +  +    Y+ +      G +  WG NS+G LG      ++
Sbjct: 531 ISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQT-GLILSWGANSDGVLGHTGGIEQL 589

Query: 165 IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-----GQESSILG 219
            P+   +E LS +  K  A G   S+ +T  G+V S+G    G+ G       + S +  
Sbjct: 590 WPLA--IESLSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAA 647

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVD-- 268
             R      P  +++     V IAA G+ HSA +  +G +Y FG         D  +   
Sbjct: 648 VARPRPIVLPDDLRK--KTVVSIAAGGY-HSALVTADGELYTFGRGGEFQLGHDTVMALG 704

Query: 269 ---KMLFQEGNHAR------RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
                L    N A+      +P+ +S L     ++V CG +H+  +T  G LYTWG   N
Sbjct: 705 EGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGALYTWGRGAN 764

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           G LG G +    +P+RV+    +  + +V+CG  H+AA+            S G     G
Sbjct: 765 GQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVD-----------SAGVIYTTG 813

Query: 378 HSSGGQLGHGND 389
               GQLG G++
Sbjct: 814 GDESGQLGKGDE 825


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 179/405 (44%), Gaps = 46/405 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVV-CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G G +G LG G   ++   +    A E H + A++ GG H+L LTE G V++ G    G+
Sbjct: 9   GGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGR 68

Query: 103 LGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG   N     EP RI+       V +IS G  HS A+T DG+ Y +G    G+LG G +
Sbjct: 69  LG-HGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFGRLGHGDE 127

Query: 161 AAKVIPIPTKV--------------ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
             +++P    +              E  +    +  A G+  S+ +T  G+V S+GAG  
Sbjct: 128 TDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVM 187

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G LGHG     L          P +I+ L   ++   A G  ++  +D+ GRV+ FG   
Sbjct: 188 GALGHGDRDKRL---------RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDY 238

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            +   F EG  AR   L S L  +EE+     G  H  +LT  G+L  +G  +NG LG+G
Sbjct: 239 SEFPKFTEGQ-ARFVLLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLG 297

Query: 324 SIDVLHSPERVQGPF--SESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSG 381
                 +P  V  P   + S    ++CG KH  A+ +      G G     F   G    
Sbjct: 298 DETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVD----VPGEGPRLYAF---GSGDQ 350

Query: 382 GQLGHGNDVDYIHPTIVN------FGENVKALQVSCGFNHTGALL 420
           GQL +G+  D   PT           +++    +S G  H+  LL
Sbjct: 351 GQLANGHRQDRASPTATTTSLPALLHQHIVPAAISAGKAHSLVLL 395



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 89/183 (48%), Gaps = 13/183 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           +G G  G LG G  + R RP +  A     + ++ACG A+TL L + G V+  GL+  +F
Sbjct: 182 FGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDYSEF 241

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            +        + L P  + GL +E+ ++  G  H   +T +G+L  +G   NG+LGLG +
Sbjct: 242 PKF-TEGQARFVLLPSAL-GLAEEITEVRAGEGHCLLLTREGKLLAFGLGKNGRLGLGDE 299

Query: 161 AAKVIPIPTKVECLSGIFTK---QAALGFEQSVAVTG----GGKVLSWGAGGSGRLGHGQ 213
             ++   PT V   S   T      A G +  +A+      G ++ ++G+G  G+L +G 
Sbjct: 300 TNRL--APTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGH 357

Query: 214 ESS 216
              
Sbjct: 358 RQD 360



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 140/346 (40%), Gaps = 46/346 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS-LKALACGGAHTLFLTETGCVYATGLNDFG 101
           +GNG +GRLG G+ E+ + P   + F+  + +  ++ G  H+L LT+ G  Y+ G   FG
Sbjct: 61  FGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMFG 120

Query: 102 QLGISENI-----------GYSLEPL---RISGLKKEVV--QISTGYHHSSAITVDGELY 145
           +LG  +             G+   P    R+   + + V   ++ GY HS  +T DG +Y
Sbjct: 121 RLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVY 180

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            +G    G LG G +  ++   PT +E L+       A G   ++ +   G+V  +G   
Sbjct: 181 SFGAGVMGALGHGDRDKRL--RPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGL-- 236

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFG 263
                    S    F    + +   L+    G+  +I    AG  H   +   G++  FG
Sbjct: 237 -------DYSEFPKFTEGQARFV--LLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFG 287

Query: 264 DRAVDKMLFQEGNHARRPSLIS-----KLPYSEEVVCGGYHTCVLTS----GGELYTWGS 314
                ++   +  +   P+ ++           ++ CG  H   L      G  LY +GS
Sbjct: 288 LGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGS 347

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            + G L  G     H  +R     + + +  +       AAIS GK
Sbjct: 348 GDQGQLANG-----HRQDRASPTATTTSLPALLHQHIVPAAISAGK 388



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 43/242 (17%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G VLS G G  G LG G   + L  L      TP  I+ LE  +V   +AG  HS  + E
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVL------TP--IRALEAHRVVAVSAGGHHSLVLTE 54

Query: 256 NGRVYIFGDRAVDKMLFQEGN-----HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            GRV+ FG+    ++    GN       RR +         ++  G  H+  LT  G+ Y
Sbjct: 55  EGRVFSFGNGLHGRL--GHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAY 112

Query: 311 TWGSNENGCLGIGS-IDVL-----------HSP---ERVQGPFSESPVDQVSCGWKHTAA 355
           ++G    G LG G   D L            SP   +RV+   ++  ++ V+ G+ H+  
Sbjct: 113 SFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLL 172

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + ++G++ ++G G              G LGHG+    + PT++    + + + ++CG  
Sbjct: 173 LTTDGRVYSFGAG------------VMGALGHGDRDKRLRPTMIEALADRRIVSMACGSA 220

Query: 415 HT 416
           +T
Sbjct: 221 NT 222


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 161/337 (47%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2923 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEAT 2982

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +   I IP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 2983 NGRLGLGLSSG-TIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3041

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3042 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     RP L+  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3152

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3153 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3199

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P IV      K + V+ G  H  A+ +
Sbjct: 3200 GHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTD 3236



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 163/350 (46%), Gaps = 36/350 (10%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYS----LEPLRISGLKKEVVQISTGYH 133
            GG  TLF +T  G +YATG    G+LGI      S    LE ++   +KK  V +++G  
Sbjct: 3935 GGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGK 3992

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H  A++ +GE+Y WG+  +G+LG G ++      P  +E L G+     A G   S  +T
Sbjct: 3993 HCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGVEVVDIAAGGAHSACIT 4050

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              G++ +WG G  GRLGHG          S  +  P+L+  L+G +V   A  +G   + 
Sbjct: 4051 ASGELFTWGKGRYGRLGHGD---------SEDQLKPKLVDALQGHRVIDVACGSGDAQTL 4101

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
            C+ ++  V+ +GD    K+     +  + P  I  L      +V CG   +  LT  G +
Sbjct: 4102 CLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAV 4161

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGG 368
            YTWG  +   LG GS D +  P +VQG      V  ++ G  H    +E G++ TW    
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW---- 4216

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                    G +  GQLG G       P +V   +  K  +V+CG  HT A
Sbjct: 4217 --------GDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 151/328 (46%), Gaps = 21/328 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   SA   + +K +A   GG H + LT  G V++ G  D 
Sbjct: 2979 GEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 3038

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3039 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 3097

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3098 NTTQLRPKLVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3151

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3152 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3206

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3207 VRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3266

Query: 336  GPFSESPVDQVSCGWKHTAAISEGKILT 363
            G      + +V+CG  H+ A +   + T
Sbjct: 3267 G-LEGQKITRVACGSSHSVAWTTVDVTT 3293



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G +YA G    G+LG+  + G    P +IS L   VV+   + +G  H
Sbjct: 2961 GGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRH 3020

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3021 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3078

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+L+K L G +V   A G     +  
Sbjct: 3079 SGELYSWGLGEYGRLGHGD---------NTTQLRPKLVKVLLGHRVIQVACGSRDAQTLA 3129

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3130 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3189

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3190 TWGKGDYFRLGHGTDVHVRKPQIVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3244

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3245 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3966 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4024

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  GEL+ WGK   G+LG G    ++ P    V+ 
Sbjct: 4025 PRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKP--KLVDA 4082

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG---------SDGCKVPMK 4133

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4134 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4193

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4194 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4252

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4253 SAHTLAWSTSK 4263



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+ +G VY+ G  D G+LG  +   Y  EP  I+        K+VVQI+ G  +
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDAT-YLEEPALITTFSGKQTGKQVVQIACGSTY 513

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+A+T DGELY WG+ + G+LG G  +++ +  P  V  L G      A G    Q++AV
Sbjct: 514 SAAVTADGELYTWGRGNYGRLGHG--SSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAV 571

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+L+++L+ + +     G   S  
Sbjct: 572 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLVEKLQDLDIVKVCCGSQFSVA 622

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  ++  G  H   LT  GE++
Sbjct: 623 LTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVH 682

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+     +   D L        P  + P        KH   IS G   ++ W
Sbjct: 683 SWGSNDK----LQHFDTLF-------PNKKQPKALPGLNSKHIVGISCGPGQSFAW 727



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 136/271 (50%), Gaps = 23/271 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3033 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3092

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N       L    L   V+Q++ G   +   A+T +G ++ WG    G+LG G  
Sbjct: 3093 LGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG-- 3150

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +   
Sbjct: 3151 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV--- 3207

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN    
Sbjct: 3208 ------RKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTTT 3257

Query: 279  --RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 3258 VNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3288



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T +G ++  G   +G+
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGR 4065

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L+P  +  L+   V+ ++  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4066 LGHGDSED-QLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRG- 4123

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4124 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4180

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4181 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4233

Query: 280  RPSLISKLPYSE--EVVCGGYHT 300
            RP L++ L   +   V CG  HT
Sbjct: 4234 RPRLVAALQGKKINRVACGSAHT 4256



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 146/316 (46%), Gaps = 35/316 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  + C     L L+ +G VY                  +L P+ I GL
Sbjct: 393 PIHCKALSSTGVTQIVCSEKVFLILSRSGAVYTQNYK-----------STTLAPMLIHGL 441

Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             +++V+++      H  A++  GE+Y WG    G+LG G   A  +  P  +   SG  
Sbjct: 442 SSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGD--ATYLEEPALITTFSGKQ 499

Query: 179 T----KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           T     Q A G   S AVT  G++ +WG G  GRLGHG    +          TP L+  
Sbjct: 500 TGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDV---------TTPMLVTA 550

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G KV   A  +G   +  + ENG+V+ +GD    K+     +  + P L+ KL   + 
Sbjct: 551 LKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDI 610

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ +     +  VD ++ G 
Sbjct: 611 VKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVD-IAVGS 669

Query: 351 KHTAAIS-EGKILTWG 365
            H  A++ EG++ +WG
Sbjct: 670 THCLALTDEGEVHSWG 685



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA ++  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2915 SAASIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2972

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GK+ + G   +GRLG G  S  +   R  S  +  ++K     KV + + G  H+  +  
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVK-----KVAVHSGG-RHAMALTV 3026

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+WG
Sbjct: 3027 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 3086

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3087 LGEYGRLGHGDNTTQLRPKLVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3141

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3142 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3182



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 23/230 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
           WG GD GRLG G       P + + F  K + K    +ACG  ++  +T  G +Y  G  
Sbjct: 470 WGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRG 529

Query: 99  DFGQL--GISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNG 153
           ++G+L  G SE++     P+ ++ LK ++VV ++  +G   + A+T +G+++ WG    G
Sbjct: 530 NYGRLGHGSSEDVTT---PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 586

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           +LG G   +     P  VE L  +   +   G + SVA+T  G+V +WG G + RLGHG 
Sbjct: 587 KLGRG--GSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGT 644

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +  +           P+L+  L+G KV   A G  H   + + G V+ +G
Sbjct: 645 DEHV---------RYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWG 685



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 91/171 (53%), Gaps = 6/171 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +A +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 526 WGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDY 585

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG   + G     L       ++V++  G   S A+T DG++Y WGK  N +LG G  
Sbjct: 586 GKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 645

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             + +  P  ++ L G      A+G    +A+T  G+V SWG+  + +L H
Sbjct: 646 --EHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGS--NDKLQH 692



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 136/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV-IPIPTK------------------------------ 170
            G +Y WG N  GQLG G + AKV +P PT+                              
Sbjct: 3895 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 3953

Query: 171  --------------------VECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                                +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3954 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4013

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L GV+V   AAG  HSACI  +G ++ +G     
Sbjct: 4014 LGHGNRSPC---------DRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYG 4064

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4065 RLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGG 4124

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4125 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4171

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4172 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4203



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 111/241 (46%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++  G+V SWG G  GRLGHG          +T    P LI    G +    V   A 
Sbjct: 459 LALSTSGEVYSWGCGDGGRLGHGD---------ATYLEEPALITTFSGKQTGKQVVQIAC 509

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA +  +G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 510 GSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTL 569

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ V+    +  + +V CG + + A++ +G+
Sbjct: 570 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK-LQDLDIVKVCCGSQFSVALTKDGQ 628

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + TWG G +             +LGHG D    +P +++  +  K + ++ G  H  AL 
Sbjct: 629 VYTWGKGDNQ------------RLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALT 676

Query: 421 E 421
           +
Sbjct: 677 D 677



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY  G  D  +
Sbjct: 580 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 639

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  +  L+ K+VV I+ G  H  A+T +GE++ WG N   Q    L
Sbjct: 640 LGHGTDEHVRY---PKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTL 696

Query: 156 GLGKKAAKVIP 166
              KK  K +P
Sbjct: 697 FPNKKQPKALP 707



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV---QGPFSESPVDQVSCGWKHT 353
           G H   L++ GE+Y+WG  + G LG G    L  P  +    G  +   V Q++CG  ++
Sbjct: 455 GQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYS 514

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AA++ +G++ TWG G              G+LGHG+  D   P +V   +  K + V+CG
Sbjct: 515 AAVTADGELYTWGRGNY------------GRLGHGSSEDVTTPMLVTALKGQKVVDVACG 562



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4164 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4223

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K++ +++ G  H+ A
Sbjct: 4224 LGDGTTNAIQ-RPRLVAALQGKKINRVACGSAHTLA 4258


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2966 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3025

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3026 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3084

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3085 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3136 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3195

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3196 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3242

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3243 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3279



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4294 IQRPRLVAALQGKKVNRVACGSAHTLA 4320



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3004 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3063

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3064 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3121

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3122 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3172

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3173 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3232

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3233 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3287

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3288 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3022 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3081

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3082 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3140

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3141 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3194

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3195 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3249

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3250 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3309

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3310 G-LEGQKITRVACGSSHSVA 3328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4144

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4196 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4314

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4315 SAHTLAWSTSKPASAG 4330



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 617

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 722



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3076 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3135

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3136 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3193

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3194 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3250

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3251 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3299

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3300 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3331



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 436

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 660 VAAGSTHCLALTEDSEVHSWG 680



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3015

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3069

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3070 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3129

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3130 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3184

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3185 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3225



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4187 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4233

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 504

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 623

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 624 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 671

Query: 421 E 421
           E
Sbjct: 672 E 672



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 634

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 686



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 509

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 510 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 557


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2657 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2716

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2717 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2775

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2776 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2827 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2886

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2887 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2933

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2934 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2970



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3653 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3710

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3711 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3768

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3769 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3823

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3824 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3878 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3937

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 3938 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3984

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 3985 IQRPRLVAALQGKKVNRVACGSAHTLA 4011



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2695 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2754

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2755 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2812

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2813 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2863

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2864 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2923

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2924 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2978

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2979 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2713 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2772

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2773 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2831

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2832 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2885

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2886 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2940

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2941 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3000

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3001 G-LEGQKITRVACGSSHSVA 3019



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3719 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3777

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3778 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3835

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3836 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3886

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3887 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3946

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3947 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4005

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4006 SAHTLAWSTSKPASAG 4021



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2767 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2826

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2827 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2884

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2885 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2941

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2942 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2990

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2991 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3022



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2706

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2758

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2759 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2818

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2819 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2874

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2875 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2916



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3648 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3706

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3707 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3766

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3767 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3817

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3818 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3877

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3878 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3924

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3925 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3956



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 84/197 (42%), Gaps = 39/197 (19%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 445

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 446 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 501

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 502 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 549

Query: 230 RLIKELEGVKVKIAAAG 246
            L+  L+G+KV   A G
Sbjct: 550 MLVAGLKGLKVIDVACG 566



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 127/309 (41%), Gaps = 50/309 (16%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 517

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G       +G
Sbjct: 518 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACG-------SG 568

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             + L+     + RL      S+LG L  +         +L GV  +    G+       
Sbjct: 569 DAQTLAVTENETTRLSVLWR-SVLGILCVSGVVESFRYNQL-GVGCRCRQRGWEPP---- 622

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEE-----VVCGG--------- 297
           +    + +G    D ML +EG     A RP  +     S++     +VCGG         
Sbjct: 623 QEDLKFFYGVLTRDVML-REGQIVFEAGRPGCVPTPVSSQKQALGYIVCGGCSSLGPGKK 681

Query: 298 --------YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSC 348
                    H   LT   E+++WGSN+  C    ++ V   PE    P      +  ++C
Sbjct: 682 VIDVAAGSTHCLALTEDSEVHSWGSNDQ-CQHFDTLRVT-KPEPAALPGLDAKHIMGITC 739

Query: 349 GWKHTAAIS 357
           G   + A S
Sbjct: 740 GPAQSCAWS 748



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 459 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 518

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 519 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 566



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 474 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 532

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITV 140
            ++G+LG   +   ++ P+ ++GLK  +V+ ++ G   +  + V
Sbjct: 533 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAV 575



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 61/173 (35%), Gaps = 58/173 (33%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G+V SWG G  GRLGHG    +           P++I    G            
Sbjct: 463 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGK----------- 502

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                                  Q G H               + CG  ++  +T+ GEL
Sbjct: 503 -----------------------QAGKHVVH------------IACGSTYSAAITAEGEL 527

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGK 360
           YTWG    G LG GS +    P  V G      +D V+CG     T A++E +
Sbjct: 528 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID-VACGSGDAQTLAVTENE 579


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2965 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3024

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 3025 NGRLGLGLSSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 3083

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3084 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3195 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3241

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3242 GHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTD 3278



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3962 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4019

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4020 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4077

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4078 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 4132

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4133 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 275  GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4187 SDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4246

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4247 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4293

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4294 IQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4028 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4086

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  G+LY WGK   G+LG G    ++ P    VE 
Sbjct: 4087 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4144

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4145 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4195

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L GV V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4196 IDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4255

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4256 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4314

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4315 SAHTLAWSTSK 4325



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +   + G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVSCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +VV G  H   LT   E+Y
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVY 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++       R+  P    P        KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTL-------RITKP---DPTALPGLDSKHIVGIACGPAQSFAW 777



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 165/347 (47%), Gaps = 33/347 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ SWG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYSWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWG---- 3286

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H + LT  G V++ G  D
Sbjct: 3021 GEATNGRLGLG-LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGD 3079

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G
Sbjct: 3080 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHG 3138

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3139 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3193

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3194 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDV 3247

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3248 HVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3307

Query: 335  QGPFSESPVDQVSCGWKHTAAISEGKILT 363
            QG      + +V+CG  H+ + +   + T
Sbjct: 3308 QG-LEGQKITRVACGSSHSVSWTTMDVAT 3335



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y+ GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVSWTT 3330



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 151/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYN-------SDILG----PQLVQSL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   E  +D 
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDV 715

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 716 VA-GSTHCLALTEDSEVYSWG 735



 Score = 94.7 bits (234), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   + + G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV    AG  H   + E+  VY +G     +  D +
Sbjct: 696 EHV---------RYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTL 746

Query: 271 LFQEGNHARRPSLISK 286
              + +    P L SK
Sbjct: 747 RITKPDPTALPGLDSK 762



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 SVATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELY+
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYS 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3182

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3183 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4075

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 4076 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 4126

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4127 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4186

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4187 SDGCKVPMKIDS-LTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4233

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4234 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I  L G +    V   A 
Sbjct: 509 LALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKMISALSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  + +VSCG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVSCGSQFSVALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V  G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G    AC       +  NGRVY   +    +   L Q        SL S+      
Sbjct: 449 LASLGVTQIACAEKRFLILSRNGRVYTQAYNSDILGPQLVQ--------SLASRNIVKIA 500

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+++WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDQTIPMLVTGLKGLKVID 608

Query: 409 VSCG 412
           VSCG
Sbjct: 609 VSCG 612



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +  G  H L LTE   VY+ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      +P  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRITKP-----DPTALPGLDSKHIVGIACGPAQSFA 776


>gi|256075111|ref|XP_002573864.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
 gi|360044963|emb|CCD82511.1| rcc1-related guanine nucleotide exchange factor [Schistosoma
           mansoni]
          Length = 414

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 187/423 (44%), Gaps = 57/423 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G  +  + P + +  +  +L  ++ GG H+L   E   +++ GLN  GQ
Sbjct: 4   WGANSHGQLGTGDDKDAYEPKIINFTDPVAL--ISGGGGHSLISNENN-IFSCGLNSVGQ 60

Query: 103 LGISENIG-YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG S +   + + P   +     V ++S G+  S A+  DG ++ WG N  GQLG     
Sbjct: 61  LGRSNDCNHFKIIPFSFA---PTVHKVSCGWDFSVAVLSDGSVFSWGSNEYGQLGKESIN 117

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           + ++P+   +E +  I     + G    V+VT  GK+  WG+    +L   +  +     
Sbjct: 118 SSIVPVRIDIEPVRSI-----SAGLRHVVSVTISGKLFGWGSNRRKQLFVDKVLNKAEHY 172

Query: 222 RSTSE--YTPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             + +  Y P L+  + G   +    AAG  HS       ++ +FGD    K+  +  + 
Sbjct: 173 DESKQICYRPTLLNSVLGDTHEWVDCAAGAYHSVARTRTNKLALFGDTRFFKLKSEVHDL 232

Query: 278 A--RRPSLISKLPYS---------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +      L S + Y          E+VVCG  H  V TS GE+Y+WG ++ G LG  +++
Sbjct: 233 SLNTESRLSSPIWYDAELFGNNKVEQVVCGWSHVLVRTSVGEVYSWGRSDFGQLG-RTVN 291

Query: 327 VLHS---------------PERVQGPFS---ESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           +L                 P +V    +   E  V  ++CG +H+ AI S G++  WGW 
Sbjct: 292 ILSKFIGKSNEIFPNFDAYPGKVHFHLNDGHEVTVKTIACGSEHSLAIDSNGQLWVWGW- 350

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--------FGENVKALQVSCGFNHTGAL 419
             HG       ++     HG   + I P I          F +N K   + CG+ H+ A 
Sbjct: 351 NEHGMCGVITKTASQIEQHGTQEEVI-PYITQPYRISFRCFNQNYKVKYIGCGYGHSMAY 409

Query: 420 LEY 422
           +E+
Sbjct: 410 VEF 412



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 20/224 (8%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +L+WGA   G+LG G +            Y P++I   + V +     G  HS   +EN 
Sbjct: 1   MLTWGANSHGQLGTGDDK---------DAYEPKIINFTDPVALISGGGG--HSLISNEN- 48

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNEN 317
            ++  G  +V ++      +  +    S  P   +V CG   +  + S G +++WGSNE 
Sbjct: 49  NIFSCGLNSVGQLGRSNDCNHFKIIPFSFAPTVHKVSCGWDFSVAVLSDGSVFSWGSNEY 108

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSED 376
           G LG  SI+    P R+       PV  +S G +H  +++  GK+  WG       F + 
Sbjct: 109 GQLGKESINSSIVPVRID----IEPVRSISAGLRHVVSVTISGKLFGWGSNRRKQLFVDK 164

Query: 377 GHSSGGQLGHGNDVDYIHPTIVN--FGENVKALQVSCGFNHTGA 418
             +          + Y  PT++N   G+  + +  + G  H+ A
Sbjct: 165 VLNKAEHYDESKQICY-RPTLLNSVLGDTHEWVDCAAGAYHSVA 207



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 17/112 (15%)

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           + TWG+N +G LG G     + P+ +   F++ PV  +S G  H+   +E  I + G   
Sbjct: 1   MLTWGANSHGQLGTGDDKDAYEPKIIN--FTD-PVALISGGGGHSLISNENNIFSCGL-- 55

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                     +S GQLG  ND +  H  I+ F       +VSCG++ + A+L
Sbjct: 56  ----------NSVGQLGRSNDCN--HFKIIPFSFAPTVHKVSCGWDFSVAVL 95


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 160/333 (48%), Gaps = 30/333 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +NG+L
Sbjct: 1   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRL 60

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           GLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+LGH  
Sbjct: 61  GLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH-- 117

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                 F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     ++   
Sbjct: 118 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 170

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  +  +
Sbjct: 171 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P+ ++   +   V Q+ CG + + A+++ G + TWG G               +LGHG+
Sbjct: 231 IPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RLGHGS 277

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           DV    P +V      K + V+ G  H  A+ +
Sbjct: 278 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 310



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 994  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 1051

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 1052 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAKDGKLG 1109

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 1110 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 1164

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 1165 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 1219 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1278

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 1279 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1325

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 1326 IQRPRLVAALQGKKVNRVACGSAHTLA 1352



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79  GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
           GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 35  GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 94

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 95  ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 152

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
            G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 153 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 203

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 204 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 263

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
           TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 318

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 319 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 150/328 (45%), Gaps = 21/328 (6%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
           G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 53  GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 112

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 113 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 171

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 172 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 225

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 226 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 280

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
            R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 281 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 340

Query: 336 GPFSESPVDQVSCGWKHTAAISEGKILT 363
           G      + +V+CG  H+ A +   + T
Sbjct: 341 G-LEGQKITRVACGSSHSVAWTTVDVAT 367



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 140/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G    G+LG   N      
Sbjct: 1060 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLG-HGNRSPCDR 1118

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 1119 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 1176

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 1177 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 1227

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 1228 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1287

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 1288 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1346

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 1347 SAHTLAWSTSKPASAG 1362



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 107 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 166

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
           LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 167 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 224

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 225 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 281

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                    P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 282 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 330

Query: 279 ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
              R+P+L+  L   +   V CG  H+   T+
Sbjct: 331 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 362



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 989  GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 1047

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 1048 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGK 1107

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 1108 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 1158

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 1159 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 1218

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 1219 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 1265

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1266 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1297


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 182/404 (45%), Gaps = 61/404 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEK--HSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG     +LG G  +++  P + S   +  + +  ++ G  H   +  TG ++  GL D 
Sbjct: 183 WGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGLCDH 242

Query: 101 GQLGIS--ENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G+LG+   +++ Y   P R+  LK EV V ++ G + S+ I+ D +++ WG  S GQLG 
Sbjct: 243 GRLGLKSGKDVPY---PTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGH 299

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            +K+ +   +P  V  L  I   Q ALG+E   A++  G V +WG G  G+LGHG     
Sbjct: 300 VEKSDEW--LPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGD---- 353

Query: 218 LGFLRSTSEYTP-RLIKELEGVKVKIA--------AAGFLHSACIDENGRVYIFGDRAVD 268
              L S S  TP +L+ ELE    ++A        A G   +  + + GR+  FG     
Sbjct: 354 ---LNSCS--TPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMSEFG 408

Query: 269 KMLFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +   E   A RP LI S++      V    G  H   +TS G +YTWG    G +G  +
Sbjct: 409 ALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWGQGCFGAVGKPA 468

Query: 325 IDVLHSPERVQGPFS-ESPVDQ----VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
                +P   + P+  E P+D+     SCG  +T  +S+                     
Sbjct: 469 RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVILSK--------------------- 507

Query: 380 SGGQLGHGNDVDYIHPTIV---NFGENVKALQVSCGFNHTGALL 420
            G  L  G+D   I P +    N    +KA  V CG  H+GA+L
Sbjct: 508 DGCVLVLGDDSTEIRPMLYDESNPASVMKASSVLCGRYHSGAIL 551



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 155/343 (45%), Gaps = 38/343 (11%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPL-----RISGLKKEVVQISTGYHHSSAITVDGELYM 146
           ++A G +   QLG  +   Y  +P       ++ L   ++ +S G  H +AI   G+L+ 
Sbjct: 180 LFAWGCSHNYQLGTGQ---YQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFT 236

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG   +G+LGL  K+ K +P PT+V+ L          G   S  ++   KV +WG+G  
Sbjct: 237 WGLCDHGRLGL--KSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSK 294

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LGH ++S          E+ PR +  L  + +   A G+ H A +  +G VY +G+  
Sbjct: 295 GQLGHVEKS---------DEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGE 345

Query: 267 VDKMLFQEGNHARRP-SLISKLPYSE-EV---------VCGGYHTCVLTSGGELYTWGSN 315
             ++   + N    P  L+ +L  +  EV          CG   T +LT  G L ++G +
Sbjct: 346 HGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGMS 405

Query: 316 ENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           E G LG+G   +   P  +      +     +S G +H AA+ S+G + TWG     G F
Sbjct: 406 EFGALGLGEKRLAARPHLITSRIMDKRRFVHLSAGDEHCAAVTSKGNVYTWG----QGCF 461

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
              G  +  +  + N  D   P  +    + +A   SCG N+T
Sbjct: 462 GAVGKPA--RRAYSNPPDCRKPYKLELPLDKRACATSCGGNYT 502


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 170/359 (47%), Gaps = 35/359 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G+LG G+   R  PV       +++ A+A G  H++ LT  G V+  G N  GQ
Sbjct: 82  WGQNMHGQLGDGTNTDRKIPVQVKDL--NNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQ 139

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       + +P++++ LK  +  I++   H+ A+  DG ++ WG+N  GQLG G    
Sbjct: 140 LGDGTTKSRN-KPVQVNNLK-NITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTD 197

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+ T+   L+ I +   A G   S+A    G + +WG    G+LG G          
Sbjct: 198 RNTPVQTR--SLNTIIS--IAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT--------- 244

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+   P L+  ++   V +   G  HS  +  NG ++I+G     ++  +  ++   P 
Sbjct: 245 ITNRTIPVLVNGIK--DVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPV 302

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG H+ +L S G ++TWG+NENG LG G+     +P +     + S 
Sbjct: 303 PMGDLKNIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQAS---TLSN 359

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           V  ++ G +H+ A+ S+G I  W WG +            GQLG G+  +   P +V  
Sbjct: 360 VTAIASGEQHSIALKSDGTI--WAWGSNR----------NGQLGDGSISNRSTPVLVKI 406



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 158/350 (45%), Gaps = 37/350 (10%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTG 131
           ++  ++ G  H++ L   G V   G N  GQLG   N    + P+++  L   V  I+ G
Sbjct: 59  TILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKI-PVQVKDL-NNVTAIAGG 116

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+T DG ++ WG N  GQLG G   ++  P+  +V  L  I T  A+ G   ++A
Sbjct: 117 AWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPV--QVNNLKNI-TAIASKGLH-NLA 172

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +   G V +WG    G+LG G          +T   TP   + L  + + IA  G+ HS 
Sbjct: 173 LKSDGTVWTWGRNIYGQLGDGT---------TTDRNTPVQTRSLNTI-ISIAGGGY-HSL 221

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
               +G ++ +G     ++      +   P L++ +     + CGG H+ VL + G ++ 
Sbjct: 222 AQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWI 281

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           WG N++G LG  S D   +P     P  +   +  +  G  H+  + S+G + TW     
Sbjct: 282 WGFNQHGQLGDRSTDNRSTPV----PMGDLKNIMTIDGGGDHSLILKSDGTVWTW----- 332

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  G++  GQLG G  +    P   +   NV A  ++ G  H+ AL
Sbjct: 333 -------GNNENGQLGDGTTMSRATPIQASTLSNVTA--IASGEQHSIAL 373



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 124/272 (45%), Gaps = 21/272 (7%)

Query: 117 RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSG 176
           RI      ++Q+S G  HS A+  DG +  WG+N +GQLG G    + IP+  +V+ L+ 
Sbjct: 52  RIPIFASTILQVSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPV--QVKDLNN 109

Query: 177 IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELE 236
           +     A G   SVA+T  G V +WG+  +G+LG G          + S   P  +  L+
Sbjct: 110 V--TAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGT---------TKSRNKPVQVNNLK 158

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG 296
            +   IA+ G LH+  +  +G V+ +G     ++          P     L     +  G
Sbjct: 159 NI-TAIASKG-LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIAGG 216

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           GYH+    + G ++TWG N+ G LG G+I     P  V G      V  + CG  H+  +
Sbjct: 217 GYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGI---KDVSMIRCGGDHSIVL 273

Query: 357 -SEGKILTWGWG--GSHGTFSEDGHSSGGQLG 385
            + G I  WG+   G  G  S D  S+   +G
Sbjct: 274 KNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMG 305



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG   +G+LG  S ++R  PV     +  ++  +  GG H+L L   G V+  G N+ G
Sbjct: 281 IWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENG 338

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           QLG    +  +  P++ S L   V  I++G  HS A+  DG ++ WG N NGQLG G  +
Sbjct: 339 QLGDGTTMSRA-TPIQASTLS-NVTAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSIS 396

Query: 162 AKVIPIPTKVE 172
            +  P+  K++
Sbjct: 397 NRSTPVLVKIK 407


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2831

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2943 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2989

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2990 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3026



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 170/385 (44%), Gaps = 35/385 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         P  C A        L  G    L +T  G +YATG    G+
Sbjct: 3709 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGYGAGGR 3768

Query: 103  LGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG G
Sbjct: 3769 LGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHG 3826

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH       
Sbjct: 3827 NRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD----- 3879

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     +
Sbjct: 3880 ----SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSD 3935

Query: 277  HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +V
Sbjct: 3936 GCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQV 3995

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
            QG      V  ++ G  H    +E G++ TW            G +  GQLG G      
Sbjct: 3996 QG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAIQ 4042

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             P +V   +  K  +V+CG  HT A
Sbjct: 4043 RPRLVAALQGKKVNRVACGSAHTLA 4067



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2810

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2811 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2868

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2980 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3034

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3035 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2828

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2887

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2996

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3057 G-LEGQKITRVACGSSHSVA 3075



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3775 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3833

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3834 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3891

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3892 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3942

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3943 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4002

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4003 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4061

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4062 SAHTLAWSTSKPASAG 4077



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2882

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2997

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3046

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 24/286 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D  +LG  + +    EP  IS        K VV I+ G  +
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 539

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 597

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 648

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 649 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 708

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAA 355
           +WGSN+  C    ++ V   PE    P      +  ++CG   ++A
Sbjct: 709 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDTKHIVGIACGPAQSSA 752



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 146/321 (45%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L +   G V     N             +L P  + GL
Sbjct: 419 PIQCKGLANLGVTQIACAEKRLLIVXRNGRVXTQAYN-----------SDTLVPQLVQGL 467

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + VV+I+  +  HH  A+   GE+Y WG     +LG G      +P+  P  +   SG
Sbjct: 468 ASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGD----TVPLEEPKVISAFSG 523

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 571

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 690

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 691 VAAGSTHCLALTEDSEVHSWG 711



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 136/282 (48%), Gaps = 30/282 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD  RLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 496 WGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 555 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 613

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 671

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 672 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
              +   A  P L +K  +   + CG   +   ++G   Y W
Sbjct: 723 RVTKPEPAALPGLDTK--HIVGIACGPAQS---SAGSSXYEW 759



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 2816

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 2817 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 2876

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 2877 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 2931

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2932 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2972



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3704 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATG 3762

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3763 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3822

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3823 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3873

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3874 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3933

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3934 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3980

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3981 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4012



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G   RLGHG    +           P++I    G +    V   A 
Sbjct: 485 LALAATGEVYSWGCGDGRRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 535

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 596 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 654

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 655 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 702

Query: 421 E 421
           E
Sbjct: 703 E 703



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  +   LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 481 GHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 540

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 541 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 588


>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
            KIAA1239-like [Oreochromis niloticus]
          Length = 2697

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 161/372 (43%), Gaps = 53/372 (14%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+ G  +  S     V     K     + CG  HTLFL   G V + G N  GQ
Sbjct: 1688 WGDSSSGQFGPQAAPSPVSWTVPGVITK-----ICCGDRHTLFLNADGNVLSCGHNSQGQ 1742

Query: 103  LGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG  +     I   +E L        VV ++ G  H  A++  G ++ WG   +GQLGL 
Sbjct: 1743 LGRQKKKNGKIIAQVEAL------GSVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLL 1796

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +     P+KV     I   Q A G   S+A+T GG V SWG    G+LG G+E  + 
Sbjct: 1797 PTPSSS-HRPSKVPIPLPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPV- 1854

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---------DRAVDK 269
                   ++TP +I  L GV V   AAG  HS  +     VY  G         +R  +K
Sbjct: 1855 -------QHTPVIICALAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEK 1907

Query: 270  MLFQEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
              F   N    P+L    P S   + CG  H+ VLT  G++YT+G    G LG  +    
Sbjct: 1908 GRF---NICMVPAL---RPLSVSFISCGESHSAVLTKDGKVYTFGDGSQGQLGHSTSANE 1961

Query: 329  HSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
              P+ V G   + P  Q++CG  HT  +           GS G     G  + GQ G+G+
Sbjct: 1962 VKPKLVAG--LDGPASQIACGRHHTLVL-----------GSSGQLWAFGSGAKGQTGNGH 2008

Query: 389  DVDYIHPTIVNF 400
            +   + PT+V F
Sbjct: 2009 NDSCLTPTLVQF 2020



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 147/295 (49%), Gaps = 18/295 (6%)

Query: 72   SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QIST 130
            S+ A+ACG  H L ++ +G V++ G  + GQLG+      S  P ++       + Q++ 
Sbjct: 1762 SVVAMACGQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVAC 1821

Query: 131  GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            G  HS A+T  G+++ WG NS+GQLGLGK+   V   P  +  L+G+   Q A G   S+
Sbjct: 1822 GNSHSLALTKGGDVFSWGLNSHGQLGLGKEVP-VQHTPVIICALAGVAVTQIAAGGTHSL 1880

Query: 191  AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
             +T    V   GA   G+LG       +  +     +   ++  L  + V   + G  HS
Sbjct: 1881 FLTLADLVYCCGANKCGQLG-------VNRVDEKGRFNICMVPALRPLSVSFISCGESHS 1933

Query: 251  ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGE 308
            A + ++G+VY FGD +  ++      +  +P L++ L  P S ++ CG +HT VL S G+
Sbjct: 1934 AVLTKDGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPAS-QIACGRHHTLVLGSSGQ 1992

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-----PVD-QVSCGWKHTAAIS 357
            L+ +GS   G  G G  D   +P  VQ P++       P D +++ GW    A S
Sbjct: 1993 LWAFGSGAKGQTGNGHNDSCLTPTLVQFPWTTDDTAAMPSDLKIAAGWNTNFAYS 2047



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 110/461 (23%), Positives = 184/461 (39%), Gaps = 106/461 (22%)

Query: 44   GNGDYGRLGLGS----LESRWRPVVCS-AFEKHSLKA-LACGGAHTLFLT-----ETGC- 91
             NG Y  L + S    L +  R  +CS   E   +KA L   G +  ++T     E GC 
Sbjct: 1548 SNGSYALLSIDSGAINLLNLSRVTLCSFKVEGPVIKACLDKTGRYVAYITTPSGLEDGCD 1607

Query: 92   --VYATGLNDFGQLGISENIG---YSLEPLRISGLKKEVVQI-----STGYHHSSAITVD 141
              ++A  +    +L   E +G    S  PL +   ++  V +     S G ++ S +TVD
Sbjct: 1608 CYLHARPILQVMRLSDGERLGAVHLSKNPLALVICEQHCVFVGFGDGSVGVYYISDVTVD 1667

Query: 142  GE---------------LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
             +               L+ WG +S+GQ G      +  P P     + G+ TK    G 
Sbjct: 1668 EDEPIRCWEDPSGGDMQLFCWGDSSSGQFG-----PQAAPSPVSWT-VPGVITK-ICCGD 1720

Query: 187  EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AA 245
              ++ +   G VLS G    G+LG  ++ +             ++I ++E +   +A A 
Sbjct: 1721 RHTLFLNADGNVLSCGHNSQGQLGRQKKKN------------GKIIAQVEALGSVVAMAC 1768

Query: 246  GFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLI--SKLPYSEEVVCGGYHTCV 302
            G  H   +  +G V+ +G     ++ L    + + RPS +         +V CG  H+  
Sbjct: 1769 GQDHCLAVSASGHVFSWGAGEDGQLGLLPTPSSSHRPSKVPIPLPIPIIQVACGNSHSLA 1828

Query: 303  LTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHT-------- 353
            LT GG++++WG N +G LG+G  + V H+P  +    +   V Q++ G  H+        
Sbjct: 1829 LTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICA-LAGVAVTQIAAGGTHSLFLTLADL 1887

Query: 354  ----------------------------AAISEGKILTWGWGGSH-GTFSEDGHS----- 379
                                         A+    +     G SH    ++DG       
Sbjct: 1888 VYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSVSFISCGESHSAVLTKDGKVYTFGD 1947

Query: 380  -SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             S GQLGH    + + P +V  G +  A Q++CG +HT  L
Sbjct: 1948 GSQGQLGHSTSANEVKPKLVA-GLDGPASQIACGRHHTLVL 1987


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2941 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3000

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 3001 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 3059

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 3060 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3111 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3170

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3171 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3217

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 3218 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3254



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3938 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3995

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3996 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4053

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 4054 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGD--- 4108

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4109 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4163 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4222

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4223 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4269

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4270 IQRPRLVAALQGKKINRVACGSAHTLA 4296



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4004 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4062

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  G+L+ WGK   G+LG G    ++ P    VE 
Sbjct: 4063 PRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKP--KLVEA 4120

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4121 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4171

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4172 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4231

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4232 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4290

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4291 SAHTLAWSTSK 4301



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 2997 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 3056

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3057 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3115

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3116 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3169

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3170 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 3224

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3225 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3284

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3285 G-LEGQKITRVACGSSHSVA 3303



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2979 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3038

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3039 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3096

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3097 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3147

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3148 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3207

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3208 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3262

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3263 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3051 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3110

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3111 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3168

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3169 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 3225

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3226 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3274

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3275 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3306



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+  G V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLE-EPKLISALSGKQAGKHVVHIACGSTY 539

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 540 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 597

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 598 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 648

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 649 LTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVH 708

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ +   PE    P  ++         KH   I+ G   ++ W
Sbjct: 709 SWGSNDQ-CQHFDTLRIT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 753



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 153/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  +  L
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN-------SDTLG----PQLVQSL 467

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A++ +GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 468 ASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG----DTVPLEEPKLISALSG 523

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 524 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 571

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++YTWG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVID- 690

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 691 VAAGSTHCLALTEDSEVHSWG 711



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2990

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 3042

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3043 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3102

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3103 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3158

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3159 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3200



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 126/256 (49%), Gaps = 25/256 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 496 WGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 554

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 555 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 613

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V +WG G + RLGHG E
Sbjct: 614 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTE 671

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD----RAVDKM 270
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G     +  D +
Sbjct: 672 EHV---------RYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 722

Query: 271 LFQEGNHARRPSLISK 286
              +   A  P L +K
Sbjct: 723 RITKPEPAALPGLDTK 738



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3933 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3991

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3992 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4051

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G ++ +G     
Sbjct: 4052 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYG 4102

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4103 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4162

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4163 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4209

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4210 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4241



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 138/319 (43%), Gaps = 46/319 (14%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    VVQI+        ++ +G +Y    NS+  LG           P  V+ 
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG-----------PQLVQS 466

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A++  G+V SWG G  GRLGHG    +           P+L
Sbjct: 467 LASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL---------EEPKL 517

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 518 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 577

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  +
Sbjct: 578 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDI 636

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +V CG + + A++ +G++ TWG G +             +LGHG +    +P ++   +
Sbjct: 637 VKVRCGSQFSIALTKDGQVYTWGKGDNQ------------RLGHGTEEHVRYPKLLEGLK 684

Query: 403 NVKALQVSCGFNHTGALLE 421
             K + V+ G  H  AL E
Sbjct: 685 GKKVIDVAAGSTHCLALTE 703


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2967 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3026

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3027 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3085

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3086 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3137 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3196

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3197 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3243

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3244 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3280



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3964 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4021

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4022 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4079

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4080 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4134

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4135 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4189 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4248

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4249 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4295

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4296 IQRPRLVAALQGKKVNRVACGSAHTLA 4322



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3122

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3123 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3173

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3174 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3233

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3234 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3288

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3289 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4030 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4088

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4089 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4146

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4147 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4197

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4198 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4257

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4258 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4316

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4317 SAHTLAWSTSKPASAG 4332



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3023 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3082

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3083 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3141

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3142 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3195

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3196 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3250

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3251 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3310

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3311 G-LEGQKITRVACGSSHSVA 3329



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 510 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 568

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 569 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 626

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 627 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 677

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 678 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 737

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 738 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 782



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3077 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3136

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3137 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3194

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3195 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3251

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3252 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3300

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3301 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3332



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 496

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 497 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 552

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 553 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 600

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 719

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 720 VAAGSTHCLALTEDSEVHSWG 740



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 525 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 583

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 584 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 643 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 700

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 701 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 740



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2959 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3016

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3068

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3069 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3128

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3129 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3184

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3185 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3226



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3959 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4017

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4018 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4077

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4078 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4128

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4129 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4188

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4189 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4235

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4236 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4267



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 581 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 640

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 641 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 699

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 700 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 742



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 514 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 564

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 565 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 624

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 625 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 683

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 684 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 731

Query: 421 E 421
           E
Sbjct: 732 E 732



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 694

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 695 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 751

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 752 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 781



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 454 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 509

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 510 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 565

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 566 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 613

Query: 409 VSCG 412
           V+CG
Sbjct: 614 VACG 617


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS  +  DGE+Y WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V +WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  V     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G VYA G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHVMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G VY +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  V   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHVMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+ VL
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMVL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE+Y WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 AWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  +   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHVMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 156/331 (47%), Gaps = 29/331 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YGRLG GS  +R  PV  S   +  + A++    H++ L   G ++  G N+ GQ
Sbjct: 292 WGYNYYGRLGDGSTINRIVPVQVSGLTE--VSAISAAFGHSMALKSDGTLWTWGYNNRGQ 349

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +I  SL P+++      V  IS GY +S A+  DG ++ WG+N  GQ G      
Sbjct: 350 LG-NNSITQSLVPVQV---LTGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTID 405

Query: 163 KVIPIPTKVECLSGI--FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
            ++PI  +V  L+G+   +  ++  +  S+A+   G V  WG   +G+LG+         
Sbjct: 406 SLVPI--QVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNN-------- 455

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P     L GV V I +AG  HS  +  +G  +I+G  +  ++       +  
Sbjct: 456 -SATQSLVPVQALGLTGV-VSI-SAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLV 512

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P  +  L     +  G YH+  L S G ++ WG N +G LG  S  V   P +V      
Sbjct: 513 PVQVPGLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQVL----- 567

Query: 341 SPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           +    VS G  H+ A+ S+G +  WGWG + 
Sbjct: 568 TGTTSVSAGTYHSMALKSDGAV--WGWGNNE 596



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 160/351 (45%), Gaps = 47/351 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +  G  H L L   G V+A G N +G+LG    I   + P+++SGL  EV  IS  + HS
Sbjct: 273 VVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTIN-RIVPVQVSGL-TEVSAISAAFGHS 330

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG L+ WG N+ GQLG       ++P    V+ L+G+ +  A  G++ S+AV   
Sbjct: 331 MALKSDGTLWTWGYNNRGQLGNNSITQSLVP----VQVLTGVASISA--GYDYSLAVKSD 384

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA--GFLHSACI 253
           G V +WG    G+ G+   S+I   +       P  +  L GV    A +   + HS  +
Sbjct: 385 GTVWAWGRNYYGQFGNN--STIDSLV-------PIQVSGLTGVTSISATSSNNYSHSLAL 435

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARRPSLISK----LPYSEEVVCGGYHTCVLTSGGEL 309
             +G V+ +G  +  ++    GN++   SL+      L     +  G  H+  L S G  
Sbjct: 436 KSDGTVWGWGYNSTGQL----GNNSATQSLVPVQALGLTGVVSISAGSNHSMALKSDGTA 491

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
           + WG N +G LG  S      P +V G    S V  +S G  H+ A+ S+G +  W W  
Sbjct: 492 WIWGGNSDGQLGNNSTAQSLVPVQVPG---LSGVSAISAGNYHSMALKSDGTV--WAW-- 544

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                   G +S GQLG+ +    + P  V  G       VS G  H+ AL
Sbjct: 545 --------GRNSSGQLGNNSTTVSLVPIQVLTG----TTSVSAGTYHSMAL 583



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 130/289 (44%), Gaps = 17/289 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG  S  +   PV  S      + ++  G  H++ L   G V+A G N  GQ
Sbjct: 710 WGDNAYGMLGNNSTVTSSIPVQVSGLT--GVSSVKAGRLHSMALKSDGTVWAWGYNTEGQ 767

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +    L P+++SGL+ +V+ IS G +HS  I  DG ++ WG+NSNGQLG      
Sbjct: 768 LG-DGSTTQRLVPVQVSGLE-DVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTG 825

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++P+  +V  L+G+    A  G   S AV   G  L+WG+   G+L  G  S+I   + 
Sbjct: 826 SLVPV--QVPGLTGVALISA--GTNTSAAVKSDGTALAWGSNTYGQLCDG--SNIQRLI- 878

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  + E  GV          HS  +  +G V+  G      +       ++ P 
Sbjct: 879 ------PVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPV 932

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
               L     +  G YH+  L S G ++ WG N  G LG  S     +P
Sbjct: 933 QTLGLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 177/433 (40%), Gaps = 79/433 (18%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A +WG    G+LG  S      PV         + A++ G  H++ L   G V+A G N 
Sbjct: 491 AWIWGGNSDGQLGNNSTAQSLVPVQVPGLS--GVSAISAGNYHSMALKSDGTVWAWGRNS 548

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG + +   SL P+++         +S G +HS A+  DG ++ WG N   ++    
Sbjct: 549 SGQLG-NNSTTVSLVPIQV---LTGTTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNT 604

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQ--SVAVTGGGK------------VLSWGAGG 205
              +++P+ T +      F        ++  S+A + GG             V +WG GG
Sbjct: 605 NLDQLVPVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGG 664

Query: 206 SGRLGHGQESSIL--------------------------------------GFLRSTSEY 227
           SG LG+G    +L                                      G L + S  
Sbjct: 665 SGVLGNGTGEQMLVGYPVRDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTV 724

Query: 228 TPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
           T  +  ++ G+  V    AG LHS  +  +G V+ +G     ++   +G+  +R  P  +
Sbjct: 725 TSSIPVQVSGLTGVSSVKAGRLHSMALKSDGTVWAWGYNTEGQL--GDGSTTQRLVPVQV 782

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           S L     +  G YH+ V+ S G ++ WG N NG LG  S      P +V G    + V 
Sbjct: 783 SGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPG---LTGVA 839

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            +S G   +AA+ S+G  L W            G ++ GQL  G+++  + P  V+    
Sbjct: 840 LISAGTNTSAAVKSDGTALAW------------GSNTYGQLCDGSNIQRLIPVQVSEPVG 887

Query: 404 VKALQVSCGFNHT 416
           V AL +    +H+
Sbjct: 888 VGALSMVVANSHS 900



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 159/347 (45%), Gaps = 47/347 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKALACGG-AHTLFLTETGCVYATGLNDF 100
           WG   YG+ G  S      P+  S      S+ A +    +H+L L   G V+  G N  
Sbjct: 390 WGRNYYGQFGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNST 449

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG + +   SL P++  GL   VV IS G +HS A+  DG  ++WG NS+GQLG    
Sbjct: 450 GQLG-NNSATQSLVPVQALGLTG-VVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNST 507

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           A  ++P+  +V  LSG+    A  G   S+A+   G V +WG   SG+LG+         
Sbjct: 508 AQSLVPV--QVPGLSGVSAISA--GNYHSMALKSDGTVWAWGRNSSGQLGNN-------- 555

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  I+ L G      +AG  HS  +  +G V+ +G+    K++         
Sbjct: 556 -STTVSLVP--IQVLTGTTS--VSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLV 610

Query: 281 P------SLISK-----LPYSEEVVC------GGY-HTCVLTSGGELYTWGSNENGCLGI 322
           P      + IS      +P S+E+        G Y ++  L S   ++ WG   +G LG 
Sbjct: 611 PVKTAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGN 670

Query: 323 GSIDVLHSPERVQGPFSE-SPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           G+ + +     V  P  + + V+Q+S G  H+ A+ S+G    W WG
Sbjct: 671 GTGEQM----LVGYPVRDLTGVEQISAGEGHSLALRSDGT--AWAWG 711



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 170/390 (43%), Gaps = 51/390 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG  S      PV   A     + +++ G  H++ L   G  +  G N  GQ
Sbjct: 444 WGYNSTGQLGNNSATQSLVPV--QALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQ 501

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + +   SL P+++ GL   V  IS G +HS A+  DG ++ WG+NS+GQLG      
Sbjct: 502 LG-NNSTAQSLVPVQVPGLSG-VSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV 559

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI    + L+G  T   + G   S+A+   G V  WG     ++        L  ++
Sbjct: 560 SLVPI----QVLTG--TTSVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVK 613

Query: 223 ST-----SEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVY--------IFGDRAV 267
           +      S++    +   + +K    ++G  + +S  +  +  V+        + G+   
Sbjct: 614 TAMNAYISDFNDGFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTG 673

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           ++ML   G   R       L   E++  G  H+  L S G  + WG N  G LG  S   
Sbjct: 674 EQMLV--GYPVR------DLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVT 725

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
              P +V G    + V  V  G  H+ A+ S+G +  W W          G+++ GQLG 
Sbjct: 726 SSIPVQVSG---LTGVSSVKAGRLHSMALKSDGTV--WAW----------GYNTEGQLGD 770

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           G+    + P  V+  E+V A  +S G  H+
Sbjct: 771 GSTTQRLVPVQVSGLEDVIA--ISAGDYHS 798



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 101/260 (38%), Gaps = 55/260 (21%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG    G+LG GS   R  PV  S  E   + A++ G  H++ +   G V+A G N  GQ
Sbjct: 760  WGYNTEGQLGDGSTTQRLVPVQVSGLED--VIAISAGDYHSMVIKSDGTVWAWGRNSNGQ 817

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG +   G SL P+++ GL   V  IS G + S+A+  DG    WG N+ GQL  G    
Sbjct: 818  LGNNSTTG-SLVPVQVPGLTG-VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQ 875

Query: 163  KVIPI----PTKVECLSGIFTKQAAL---------------------------------- 184
            ++IP+    P  V  LS +     +L                                  
Sbjct: 876  RLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTL 935

Query: 185  ----------GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
                      G   S+A+   G +  WG  G G+LG    +S L  + S   + P     
Sbjct: 936  GLAGVVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAPVASKRWFFPDDYLN 995

Query: 235  LEGVKVKIAAAGFLHSACID 254
            L G      A G   S  ID
Sbjct: 996  LGG---GYEAPGTFESGTID 1012



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           A  WG+  YG+L  GS   R  PV  S        ++    +H+L L   G V+  G ND
Sbjct: 857 ALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWGCGRND 916

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +G +G + +I  S  P++  GL   VV IS G +HS A+  DG ++ WG N  GQLG   
Sbjct: 917 YGPIG-NNSITDSKVPVQTLGLAG-VVSISAGLYHSMALKSDGTIWGWGYNGYGQLGDNS 974

Query: 160 KAAKVIPIPTK 170
             +++ P+ +K
Sbjct: 975 TTSRLAPVASK 985


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2905 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2964

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2965 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3023

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3024 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3135 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3181

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3182 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3218



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3902 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3959

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3960 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4017

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4018 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4072

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4073 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4127 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4186

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4187 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4233

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4234 IQRPRLVAALQGKKVNRVACGSAHTLA 4260



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3060

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3061 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3111

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3112 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3171

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3226

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3227 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3968 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4026

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4027 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4084

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4085 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4135

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4136 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4195

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4196 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4254

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4255 SAHTLAWSTSKPASAG 4270



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2961 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3020

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3021 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3079

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3080 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3133

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3134 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3188

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3189 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3248

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3249 G-LEGQKITRVACGSSHSVA 3267



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 450 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 508

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 509 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 566

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 567 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 617

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 618 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 677

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 678 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 722



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3015 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3074

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3075 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3132

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3133 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3189

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3190 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3238

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3239 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3270



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 436

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 437 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 492

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 493 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 540

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 659

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 660 VAAGSTHCLALTEDSEVHSWG 680



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 465 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 523

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 524 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 583 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 640

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 641 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 680



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2897 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2954

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3006

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3007 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3066

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3067 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3122

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3123 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3164



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4015

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4016 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4066

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4067 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4126

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4127 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4173

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4174 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4205



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 521 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 580

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 581 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 639

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 640 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 682



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 454 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 504

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 505 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 564

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 565 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 623

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 624 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 671

Query: 421 E 421
           E
Sbjct: 672 E 672



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 634

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 635 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 691

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 692 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 721



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 394 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 449

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 450 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 505

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 506 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 553

Query: 409 VSCG 412
           V+CG
Sbjct: 554 VACG 557


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 38/324 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G YGRLG G+  S   P++   F     K L   G+  H++ + + G ++  G  D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDGDYG 244

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG  ++       L  +   + +V    G+ HS+A+   G LYMWG+   G+LGLG   
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304

Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            + +P+  P   E        Q   GF  +V ++  G+ V S+GA  +G+LGHG      
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
               +  ++ P++I  L+G+ +   AAG   SA +   G +Y+       G+ + D+   
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
                   P ++  L      ++  G  H   LT  G ++TWG+N+NG  G GS +    
Sbjct: 410 -------LPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462

Query: 330 SPERVQGPFSESPVDQVSCGWKHT 353
           SP+ VQG    + + QV+ G  HT
Sbjct: 463 SPQMVQG-LHGAGIQQVTAGTTHT 485



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 158/334 (47%), Gaps = 31/334 (9%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  G N   QL  +      L P  +S   K V+ ++ G + + A+  +G +   GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSMTAGQYCTFAVLSNGTVMANGKGS 189

Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G+LG G  A+   PI  +    +  I T + + G   S+A+   G++ +WG G  G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSIAIGKNGQIWTWGDGDYGKLG 247

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          ST++ +P+LI+ L    +  A  G  HSA + + G +Y++G+    ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLH 329
              +      P  +  +  + +VVCG  HT VL T G  ++++G+ ENG LG G  +   
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG- 387
            P+ +        + Q++ G + +AA++ EG +  WG+G                LG+G 
Sbjct: 359 RPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGPC--------------LGNGS 403

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           +D  ++ P +V        + ++ G NH  AL +
Sbjct: 404 SDETFMLPKVVRGLSGRVVIDIAVGENHVVALTK 437



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G   ++  P +  A     +    CG  H+  + + G +Y  G  D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
           LG+ + +  S+ P+++  + +E  Q+  G++H+  ++ DG  ++ +G   NG+LG G   
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  ++ L G+   Q A G + S AVT  G +  WG G     G   E+ +L   
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                  P++++ L G  V   A G  H   + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGN 446



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 123/281 (43%), Gaps = 30/281 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E++ WG NS+ QL       K++  P  +     + +  A  G   + AV   G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSMTA--GQYCTFAVLSNGTVMANG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVYI 261
            G  GRLG+G          S S  +P LI+    V+  + + G   HS  I +NG+++ 
Sbjct: 187 KGSYGRLGNGA---------SASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWT 237

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
           +GD    K+   +    + P LI  L  S  +V   CG  H+  +   G LY WG  + G
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALA-SRVIVDADCGHRHSAAVCDAGHLYMWGEGDYG 296

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
            LG+G  D L     VQ P       QV CG+ HT  +S      W +G +         
Sbjct: 297 RLGLG--DALQRSVPVQVP-DIREASQVVCGFNHTVVLSTDGRTVWSFGAAE-------- 345

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G+LGHG+      P I++  + +   Q++ G   + A+
Sbjct: 346 --NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
           +WG GDYGRLGLG    R  PV      + S   + CG  HT+ L+  G  V++ G  + 
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG  +       P  I  L+   + QI+ G   S+A+T +G LY+WG      LG G 
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +   +P  V  LSG      A+G    VA+T  G V +WG   +G+ G G      G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
               TS   P++++ L G  ++   AG  H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 153/324 (47%), Gaps = 38/324 (11%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA--HTLFLTETGCVYATGLNDFG 101
           G G YGRLG G+  S   P++   F     K L   G+  H++ + + G ++  G  D+G
Sbjct: 186 GKGSYGRLGNGASASSSSPILIE-FPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDGDYG 244

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG  ++       L  +   + +V    G+ HS+A+   G LYMWG+   G+LGLG   
Sbjct: 245 KLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDAL 304

Query: 162 AKVIPI--PTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSIL 218
            + +P+  P   E        Q   GF  +V ++  G+ V S+GA  +G+LGHG      
Sbjct: 305 QRSVPVQVPDIREA------SQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGD----- 353

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI------FGDRAVDKMLF 272
               +  ++ P++I  L+G+ +   AAG   SA +   G +Y+       G+ + D+   
Sbjct: 354 ----TNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFM 409

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLH 329
                   P ++  L      ++  G  H   LT  G ++TWG+N+NG  G GS +    
Sbjct: 410 -------LPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYT 462

Query: 330 SPERVQGPFSESPVDQVSCGWKHT 353
           SP+ VQG    + + QV+ G  HT
Sbjct: 463 SPQMVQG-LHGAGIQQVTAGTTHT 485



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 157/332 (47%), Gaps = 31/332 (9%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V+  G N   QL  +      L P  +S   K V+ I+ G + + A+  +G +   GK S
Sbjct: 131 VFCWGSNSSQQLTDATPEDKLLYPRNLSVYGK-VMSITAGQYCTFAVLSNGTVMANGKGS 189

Query: 152 NGQLGLGKKAAKVIPIPTKVEC-LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            G+LG G  A+   PI  +    +  I T + + G   S+A+   G++ +WG G  G+LG
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDG--HSMAIGKNGQIWTWGDGDYGKLG 247

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           HG          ST++ +P+LI+ L    +  A  G  HSA + + G +Y++G+    ++
Sbjct: 248 HGD---------STTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRL 298

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLH 329
              +      P  +  +  + +VVCG  HT VL T G  ++++G+ ENG LG G  +   
Sbjct: 299 GLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQF 358

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHG- 387
            P+ +        + Q++ G + +AA++ EG +  WG+G                LG+G 
Sbjct: 359 RPKIIDA-LQGLTITQIAAGTQISAAVTREGALYVWGFGPC--------------LGNGS 403

Query: 388 NDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +D  ++ P +V        + ++ G NH  AL
Sbjct: 404 SDETFMLPKVVRGLSGRVVIDIAIGENHVVAL 435



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 111/223 (49%), Gaps = 15/223 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G   ++  P +  A     +    CG  H+  + + G +Y  G  D+G+
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGR 297

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA 161
           LG+ + +  S+ P+++  + +E  Q+  G++H+  ++ DG  ++ +G   NG+LG G   
Sbjct: 298 LGLGDALQRSV-PVQVPDI-REASQVVCGFNHTVVLSTDGRTVWSFGAAENGKLGHGDTN 355

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P  ++ L G+   Q A G + S AVT  G +  WG G     G   E+ +L   
Sbjct: 356 RQF--RPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFML--- 410

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                  P++++ L G  V   A G  H   + ++G V+ +G+
Sbjct: 411 -------PKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGN 446



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 123/281 (43%), Gaps = 30/281 (10%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           E++ WG NS+ QL       K++  P  +     + +  A  G   + AV   G V++ G
Sbjct: 130 EVFCWGSNSSQQLTDATPEDKLL-YPRNLSVYGKVMSITA--GQYCTFAVLSNGTVMANG 186

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL-HSACIDENGRVYI 261
            G  GRLG+G          S S  +P LI+    V+  + + G   HS  I +NG+++ 
Sbjct: 187 KGSYGRLGNG---------ASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWT 237

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
           +GD    K+   +    + P LI  L  S  +V   CG  H+  +   G LY WG  + G
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALA-SRVIVDADCGHRHSAAVCDAGHLYMWGEGDYG 296

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH 378
            LG+G  D L     VQ P       QV CG+ HT  +S      W +G +         
Sbjct: 297 RLGLG--DALQRSVPVQVP-DIREASQVVCGFNHTVVLSTDGRTVWSFGAAE-------- 345

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G+LGHG+      P I++  + +   Q++ G   + A+
Sbjct: 346 --NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAV 384



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 16/211 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDF 100
           +WG GDYGRLGLG    R  PV      + S   + CG  HT+ L+  G  V++ G  + 
Sbjct: 289 MWGEGDYGRLGLGDALQRSVPVQVPDIREAS--QVVCGFNHTVVLSTDGRTVWSFGAAEN 346

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG  +       P  I  L+   + QI+ G   S+A+T +G LY+WG      LG G 
Sbjct: 347 GKLGHGDT-NRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPC--LGNG- 402

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +   +P  V  LSG      A+G    VA+T  G V +WG   +G+ G G      G
Sbjct: 403 SSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-----G 457

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
               TS   P++++ L G  ++   AG  H+
Sbjct: 458 MATYTS---PQMVQGLHGAGIQQVTAGTTHT 485


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4312 SAHTLAWSTSKPASAG 4327



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4230

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 608

Query: 409 VSCG 412
           V+CG
Sbjct: 609 VACG 612


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2960 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3019

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3020 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3078

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3079 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3130 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3189

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3190 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3236

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3237 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3273



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 172/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 3958 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4016

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 4017 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4074

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH      
Sbjct: 4075 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4128

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4129 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4183

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 4184 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4243

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    SE G++ TW            G +  GQLG G     
Sbjct: 4244 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNAI 4290

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 4291 QRPRLVAALQGKKVNRVACGSAHTLA 4316



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2998 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3057

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3058 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3115

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3116 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3166

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3167 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3226

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3227 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3281

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3282 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3016 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3075

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3076 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3134

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3135 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3188

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3189 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3243

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3244 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3303

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3304 G-LEGQKITRVACGSSHSVA 3322



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4024 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4082

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4083 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4140

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4141 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4191

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4192 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4251

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    +  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4252 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4310

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4311 SAHTLAWSTSKPASAG 4326



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3070 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3129

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3130 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3187

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3188 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3244

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3245 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3293

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3294 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3325



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3009

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3061

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3062 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3121

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3122 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3177

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3178 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3219



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 132/332 (39%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3953 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4011

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4012 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4071

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4072 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4122

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4123 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4182

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4183 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4229

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4230 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4261



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|328874090|gb|EGG22456.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 464

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 162/347 (46%), Gaps = 44/347 (12%)

Query: 30  WISSTLQRRFAA--LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLT 87
           W+SS L    +   +WG  ++G++GL   +    P     F+   ++ +A G +  L LT
Sbjct: 113 WMSSFLHTNDSKIFMWGTNNHGQMGLPGNQVYRYPTESEMFKGLDIERVALGRSFLLILT 172

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMW 147
           + G V + G N+FGQLGIS       + L++    K+VV +  G+ HS A+T  G  + W
Sbjct: 173 KQGKVLSIGSNEFGQLGISSQEQRGSQTLQVVQNLKDVVSMHAGFDHSFAVTKSGHAFGW 232

Query: 148 GKNSNGQLG-----------LGKKAAKVI-------------PIPTKVECLSGIFTKQAA 183
           G N  GQLG            G++  + +               PT V  +  I   +  
Sbjct: 233 GYNVEGQLGQKIVEYERVEATGEEKQQDMHDLHKTMHPDAEYNTPTLVPGMEAIKVAKVF 292

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G++ +  ++  G V + G   +G LG G E +I    ++T    P         K+K  
Sbjct: 293 CGYDCTFLLSARGNVYAMGNNETGTLGLG-EDAIGRIAKATKVQLPE--------KIKSI 343

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCG 296
           + G  HS  + E+ +VY+ G  A  ++    GN+     + + +P+        ++V CG
Sbjct: 344 SCGATHSMFLSESNKVYVCGWGAEGRLGL--GNNTINRYVPTLIPFFAENRIKVDQVSCG 401

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
           G H+ +LT+ G +Y+WG  E+G LG G  ++ + P+ +Q   ++ P+
Sbjct: 402 GAHSLLLTTDGRVYSWGCGEDGKLGHGDEELSNDPKLIQFFENKKPI 448



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 172/403 (42%), Gaps = 41/403 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKH-SLKALACGGAHTLFLTETGCVYAT 95
           R+   ++G+   G+LG+ +   R  P   +      S+K        +   T    ++  
Sbjct: 69  RQTVWMFGSCADGKLGVKTESHRSIPTKVTHLPPFLSVKEGGTTWMSSFLHTNDSKIFMW 128

Query: 96  GLNDFGQLGISEN--IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G N+ GQ+G+  N    Y  E     GL  ++ +++ G      +T  G++   G N  G
Sbjct: 129 GTNNHGQMGLPGNQVYRYPTESEMFKGL--DIERVALGRSFLLILTKQGKVLSIGSNEFG 186

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-- 211
           QLG+  +  +       V+ L  + +  A  GF+ S AVT  G    WG    G+LG   
Sbjct: 187 QLGISSQEQRGSQTLQVVQNLKDVVSMHA--GFDHSFAVTKSGHAFGWGYNVEGQLGQKI 244

Query: 212 ---------GQES-----SILGFLRSTSEY-TPRLIKELEGVKVKIAAAGFLHSACIDEN 256
                    G+E       +   +   +EY TP L+  +E +KV     G+  +  +   
Sbjct: 245 VEYERVEATGEEKQQDMHDLHKTMHPDAEYNTPTLVPGMEAIKVAKVFCGYDCTFLLSAR 304

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLIS-KLPYS-EEVVCGGYHTCVLTSGGELYTWGS 314
           G VY  G+     +   E    R       +LP   + + CG  H+  L+   ++Y  G 
Sbjct: 305 GNVYAMGNNETGTLGLGEDAIGRIAKATKVQLPEKIKSISCGATHSMFLSESNKVYVCGW 364

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSES--PVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
              G LG+G+  +      +   F+E+   VDQVSCG  H+  ++ +G++ +WG G    
Sbjct: 365 GAEGRLGLGNNTINRYVPTLIPFFAENRIKVDQVSCGGAHSLLLTTDGRVYSWGCG---- 420

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
              EDG     +LGHG++     P ++ F EN K + +S G +
Sbjct: 421 ---EDG-----KLGHGDEELSNDPKLIQFFENKKPIFISAGVD 455


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 174/386 (45%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 2176 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 2234

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 2235 RLGIGGTESVSTPTLLESIQHVFVKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 2292

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  VE L GI     A G   S  +T  G + SWG G  GRLGHG     
Sbjct: 2293 GNRSP--CDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGD---- 2346

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 2347 -----SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2401

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 2402 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 2461

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    +E G++ TW            G +  GQLG G     
Sbjct: 2462 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 2508

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 2509 QRPRLVAALQGKKINRVACGSAHTLA 2534



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 141/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 2242 ESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 2300

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  +  L+  EVV I+ G  HS+ ITV G+LY WGK   G+LG G    ++ P    VE 
Sbjct: 2301 PRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKP--KLVEA 2358

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 2359 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 2409

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 2410 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 2469

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 2470 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 2528

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 2529 SAHTLAWSTSK 2539



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 146/294 (49%), Gaps = 19/294 (6%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 1151 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 1210

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V P+P ++  LS    K+ A+  G   ++A+T  GKV SWG G  G+L
Sbjct: 1211 NGRLGLGISSGTV-PLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKL 1269

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 1270 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 1320

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 1321 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1380

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWG-GSHGTFSEDGH 378
            +  + P+ ++   +   V Q+ CG + + A+++  ++ W WG G  G    D H
Sbjct: 1381 EGCNVPQNIER-LNGQGVCQIECGAQFSLALTKSGVV-WTWGRGDFGELRPDSH 1432



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 123/247 (49%), Gaps = 21/247 (8%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG V++ G  D G+LG  + +    EP  IS L      K VV I+ G  +
Sbjct: 209 GHHYLALAATGEVFSWGCGDGGRLGHGDTVPLE-EPKMISALSGKQAGKHVVHIACGSTY 267

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     + G    Q++AV
Sbjct: 268 SAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM--LVTGLKGLKVIDVSCGSGDAQTLAV 325

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 326 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 376

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 377 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVH 436

Query: 311 TWGSNEN 317
           +WGSN+ 
Sbjct: 437 SWGSNDQ 443



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 152/321 (47%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N       S+ +G    P  + GL
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYN-------SDTLG----PQLVQGL 195

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+++  +  HH  A+   GE++ WG    G+LG G      +P+  P  +  LSG
Sbjct: 196 ASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGD----TVPLEEPKMISALSG 251

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  +  P
Sbjct: 252 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDQTIP 299

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  VD 
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVD- 418

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 419 VAAGSTHCLALTEDSEVHSWG 439



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 129/291 (44%), Gaps = 30/291 (10%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPL--------PRQITALSNYVVKKVAVHSGGRHAMAL 1252

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 1253 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 1312

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 1368

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G F        G+LG G       P  +         Q+ CG   + AL
Sbjct: 1369 -DGDF--------GKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 57/375 (15%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 1189 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRH 1248

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 1249 AMALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 1306

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 1307 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 1357

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 1358 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 1417

Query: 311  TWGSNENGCLGIGSIDV----LHSPERVQG--------PFSESPVDQVSCGW-----KHT 353
            TWG  + G L   S  V    +    RV+         PF    V     GW     +  
Sbjct: 1418 TWGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFF-GLVSPREMGWEIVGIERN 1476

Query: 354  AAIS----------EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            + IS          E ++  + WG       ++ H   GQ G+G       PT+V   E 
Sbjct: 1477 SGISSFCGQQGERRERQLEVYAWG-------DNDH---GQQGNGTTTVNRKPTLVQGLEG 1526

Query: 404  VKALQVSCGFNHTGA 418
             K  +V+CG +H+ A
Sbjct: 1527 QKITRVACGSSHSVA 1541



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P + SA       KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 224 WGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 282

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ +S  +G   + A+T +G+++ WG    G+
Sbjct: 283 GNYGRLGHGSSEDQTI-PMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 342 LGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 399

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 400 EHV---------RYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWG 439



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 2171 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2229

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 2230 YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 2289

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 2290 LGHGNRSPC---------DRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYG 2340

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 2341 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 2400

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 2401 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 2447

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 2448 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 2479



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 111/211 (52%), Gaps = 11/211 (5%)

Query: 2    LGRSLTAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWR 61
            L R +TA++ Y +K   K+    G  +  ++ T+  +  + WG GD G+LG  S  +  +
Sbjct: 1225 LPRQITALSNYVVK---KVAVHSG-GRHAMALTVDGKVFS-WGEGDDGKLGHFSRMNCDK 1279

Query: 62   PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
            P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+LG  +N    L+P  +  L
Sbjct: 1280 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKVL 1338

Query: 122  K-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
                V+Q++ G   +   A+T +G ++ WG    G+LG G   ++   +P  +E L+G  
Sbjct: 1339 LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNVPQNIERLNGQG 1396

Query: 179  TKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
              Q   G + S+A+T  G V +WG G  G L
Sbjct: 1397 VCQIECGAQFSLALTKSGVVWTWGRGDFGEL 1427



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 123/286 (43%), Gaps = 57/286 (19%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
            WG G+YGRLG G   ++ +P +      H +  +ACG   A TL LT+ G V++ G  DF
Sbjct: 1313 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 1372

Query: 101  GQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGK---------- 149
            G+LG   + G ++ P  I  L  + V QI  G   S A+T  G ++ WG+          
Sbjct: 1373 GKLGRGGSEGCNV-PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDS 1431

Query: 150  ------NSNGQLGLGKKAAKVIPIP--------------TKVECLSGI--FTKQAALGFE 187
                  N + ++ +  K A +IP+P                +E  SGI  F  Q     E
Sbjct: 1432 HIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRE 1491

Query: 188  QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            + +      +V +WG    G+ G+G          +T    P L++ LEG K+   A G 
Sbjct: 1492 RQL------EVYAWGDNDHGQQGNGT---------TTVNRKPTLVQGLEGQKITRVACGS 1536

Query: 248  LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV 293
             HS        V +    A + +LFQ    AR P   S L  S +V
Sbjct: 1537 SHSVAWTT---VDVAAPSAHEPVLFQT---ARDPLGASYLGVSSDV 1576



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 137/319 (42%), Gaps = 46/319 (14%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    V QI+        ++ +G +Y+   NS+  LG           P  V+ 
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQAYNSD-TLG-----------PQLVQG 194

Query: 174 LS--GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L+   I    A       +A+   G+V SWG G  GRLGHG    +           P++
Sbjct: 195 LASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL---------EEPKM 245

Query: 232 IKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           I  L G +    V   A G  +SA I   G +Y +G     ++          P L++ L
Sbjct: 246 ISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGL 305

Query: 288 PYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
              +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  +
Sbjct: 306 KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDI 364

Query: 344 DQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            +V CG + + A++ +G++ +WG G +             +LGHG +    +P ++   +
Sbjct: 365 VKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQ 412

Query: 403 NVKALQVSCGFNHTGALLE 421
             K + V+ G  H  AL E
Sbjct: 413 GKKVVDVAAGSTHCLALTE 431



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 386 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQ 445

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++      +P  + GL  K +V I+ G   S A
Sbjct: 446 HFDTLRITKP-----QPSALPGLDTKHIVGIACGPAQSFA 480


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 172/372 (46%), Gaps = 58/372 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-IS 129
           ++ +ACG  H   +T  G V++ G    G+LG  +  ++ +   P  I  L    VQ ++
Sbjct: 125 VQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAH---PQLIDSLASSTVQYVA 181

Query: 130 TGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE 187
            G +HS A+T  G+LY WG  ++  G LG G   +   P       L G+     A G  
Sbjct: 182 CGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGP-LEGVRVSSVACGPW 240

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
            +V VT  G++ S+G G  G LGHG   S            PR ++ L+G+K   AA G 
Sbjct: 241 HTVLVTSTGQLFSFGDGTFGVLGHGDRKSA---------SMPREVESLKGLKTLRAACGP 291

Query: 248 LHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEV 293
            H+A + E            +G+++ +GD   +++   +      P+ ++ L      +V
Sbjct: 292 WHTAAVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQV 351

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFS--ESPVDQVSC 348
            CG   T  LT+ G LYT GS   G LG         P+   R+ G      + +++VSC
Sbjct: 352 ACGHSLTVALTTTGHLYTMGSVSYGQLG--------DPQATGRLPGVLRLGRTLIEEVSC 403

Query: 349 GWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
           G  H AA+ S+G + TWG G +            G+LGHG+  D   P++V    + +  
Sbjct: 404 GAYHVAALTSKGDVCTWGKGAN------------GRLGHGDAEDRDVPSLVEALRDKQVK 451

Query: 408 QVSCGFNHTGAL 419
           +VSCG + T A+
Sbjct: 452 KVSCGSSFTSAI 463



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 128/301 (42%), Gaps = 43/301 (14%)

Query: 140 VDGELYMWGKNSNGQLGLGKKAAKVIP---IPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           V GEL+MWG+      G  K          +P  V  L  +  +Q A G   +  VT  G
Sbjct: 83  VFGELWMWGEGIGDGGGTKKLDTSFRTDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQG 142

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG    GRLGHG ++ +           P+LI  L    V+  A G  HS  + ++
Sbjct: 143 EVFSWGEESGGRLGHGVDADVA---------HPQLIDSLASSTVQYVACGEYHSCAVTQS 193

Query: 257 GRVYIFGDRAVDKMLFQEGNH-----ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
           G +Y +GD   +  L   GN+      +R     +      V CG +HT ++TS G+L++
Sbjct: 194 GDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVACGPWHTVLVTSTGQLFS 253

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE------------- 358
           +G    G LG G       P  V+         + +CG  HTAA+ E             
Sbjct: 254 FGDGTFGVLGHGDRKSASMPREVES-LKGLKTLRAACGPWHTAAVVEVMSRYSNAGSSLS 312

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           GK+ TWG G  +            +LGHG+    + PT V    +    QV+CG + T A
Sbjct: 313 GKLFTWGDGDKN------------RLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVA 360

Query: 419 L 419
           L
Sbjct: 361 L 361



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T  + PR ++ L  + V+  A G  H+A +   G V+ +G+ +  ++          P L
Sbjct: 109 TDAFLPRAVRSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQL 168

Query: 284 ISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFS 339
           I  L  S  + V CG YH+C +T  G+LYTWG  ++  G LG G+     +P+RV GP  
Sbjct: 169 IDSLASSTVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLE 228

Query: 340 ESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
              V  V+CG  HT  + S G++ ++G     GTF        G LGHG+      P  V
Sbjct: 229 GVRVSSVACGPWHTVLVTSTGQLFSFG----DGTF--------GVLGHGDRKSASMPREV 276

Query: 399 NFGENVKALQVSCGFNHTGALLEYV 423
              + +K L+ +CG  HT A++E +
Sbjct: 277 ESLKGLKTLRAACGPWHTAAVVEVM 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 4/150 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG G  E +  P   +A   H+ + +ACG + T+ LT TG +Y  G   +GQ
Sbjct: 318 WGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSLTVALTTTGHLYTMGSVSYGQ 377

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG  +  G     LR+   +  + ++S G +H +A+T  G++  WGK +NG+LG G   A
Sbjct: 378 LGDPQATGRLPGVLRLG--RTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGD--A 433

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +   +P+ VE L     K+ + G   + A+
Sbjct: 434 EDRDVPSLVEALRDKQVKKVSCGSSFTSAI 463


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 172/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4018

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 4019 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4076

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH      
Sbjct: 4077 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4130

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4131 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4185

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4245

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    SE G++ TW            G +  GQLG G     
Sbjct: 4246 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNAI 4292

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 4293 QRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4085 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    +  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4313 SAHTLAWSTSKPASAG 4328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 132/332 (39%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4231

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612



 Score = 40.0 bits (92), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2939 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2998

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2999 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3057

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3058 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3109 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3168

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3169 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3215

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3216 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3252



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3937 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3994

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3995 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4052

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4053 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4107

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4108 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4162 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4221

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4222 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4268

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4269 IQRPRLVAALQGKKVNRVACGSAHTLA 4295



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2977 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3036

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3037 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3094

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3095 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3145

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3146 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3205

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3206 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3260

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3261 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4003 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4061

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4062 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4119

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4120 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4170

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4171 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4230

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4231 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4289

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4290 SAHTLAWSTSKPASAG 4305



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2995 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3054

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3055 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3113

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3114 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3167

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3168 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3222

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3223 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3282

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3283 G-LEGQKITRVACGSSHSVA 3301



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 482 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 540

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 541 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 598

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 599 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 649

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 650 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 709

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 710 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 754



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3049 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3108

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3109 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3166

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3167 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3223

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3224 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3272

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3273 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3304



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 468

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 469 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 524

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 525 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 572

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 691

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 692 VAAGSTHCLALTEDSEVHSWG 712



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 497 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 555

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 556 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 615 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 672

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 673 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 712



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2988

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3040

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3041 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3100

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3101 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3156

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3157 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3198



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3932 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3990

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3991 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4050

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4051 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4101

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4102 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4161

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4162 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4208

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4209 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4240



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 553 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 612

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 613 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 671

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 672 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 714



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 48/320 (15%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    V QI+        ++ +G +Y    NS+    QL  G  +  +I I   
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKI--- 476

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 477 ----------AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPK 517

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I    G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 518 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 577

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  
Sbjct: 578 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLD 636

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V +V CG + + A++ +G++ +WG G +             +LGHG +    +P ++   
Sbjct: 637 VVKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGL 684

Query: 402 ENVKALQVSCGFNHTGALLE 421
           +  K + V+ G  H  AL E
Sbjct: 685 QGKKVIDVAAGSTHCLALTE 704



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 607 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 666

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 667 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 718


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2713 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2772

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   ++A+T  GK+ SWG G  G+L
Sbjct: 2773 NGRLGLGISSGTV-PIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKL 2831

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA I  +G +Y +G     +
Sbjct: 2832 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2883 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2942

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2943 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2989

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG DV    P +V      K + V+ G  H  A+ +
Sbjct: 2990 GHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3026



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3711 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPIQLIGGEQTLFAVTADGKLYATGYGAG 3768

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3769 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3826

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  +T  G + +WG G  GRLGHG    
Sbjct: 3827 HGNRSP--CDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGD--- 3881

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3882 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3936 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3995

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 3996 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4042

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4043 IQRPRLVAALQGKKINRVACGSAHTLA 4069



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3777 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3835

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  G+LY WGK   G+LG G    ++ P    VE 
Sbjct: 3836 PRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKP--KLVEA 3893

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3894 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3944

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3945 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4004

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4005 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4063

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4064 SAHTLAWSTSK 4074



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 148/320 (46%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H + LT  G +++ G  D 
Sbjct: 2769 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDD 2828

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 2829 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 2887

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2888 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2941

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2942 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVH 2996

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2997 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3056

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3057 G-LEGQKITRVACGSSHSVA 3075



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2751 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 2810

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            + A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2811 AMALTVDGKIFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 2868

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2869 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2919

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2920 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG G+   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2980 TWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWG---- 3034

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3035 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 2823 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 2882

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2883 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2940

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2941 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHV-- 2997

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2998 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG----QQGNGTT 3046

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3047 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3078



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHAMAL 2814

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+++ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 2815 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 2874

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2875 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2930

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2931 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2972



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3706 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATG 3764

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3765 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3824

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSACI   G +Y +G     
Sbjct: 3825 LGHGNRSPC---------DRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYG 3875

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3876 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3935

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3936 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3982

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3983 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4014



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 71/187 (37%), Gaps = 42/187 (22%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N    +G+     +SL        
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVA--VFSL-------- 406

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
                             + G+++ WG    G+LG G   +     P  +E L  +   +
Sbjct: 407 ------------------IFGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVK 446

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
              G + SVA+T  G+V SWG G + RLGHG E  +            R  K LEG++  
Sbjct: 447 VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHV------------RYPKLLEGLQAT 494

Query: 242 IAAAGFL 248
           +  A  L
Sbjct: 495 LPQANCL 501



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 414 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQR 473

Query: 103 L--GISENIGYSLEPLRISGLKKEVVQ 127
           L  G  E++ Y   P  + GL+  + Q
Sbjct: 474 LGHGTEEHVRY---PKLLEGLQATLPQ 497



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 13/121 (10%)

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGS 314
           G+V+ +GD    K+     +  + P LI KL   +  +V CG   +  LT  G++Y+WG 
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK 468

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC---------GWKHTAAISEGKILTWG 365
            +N  LG G+ + +  P+ ++G  +  P  Q +C           KH   I+ G   ++ 
Sbjct: 469 GDNQRLGHGTEEHVRYPKLLEGLQATLP--QANCLSKKXXXXLDTKHIVGIACGPAQSFA 526

Query: 366 W 366
           W
Sbjct: 527 W 527



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 40/174 (22%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P++  GL    + QI+        ++ +G +YM   NS+  +G+             V  
Sbjct: 357 PIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYNSDTLVGV-------------VAV 403

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK 233
            S IF                 G+V SWG G  G+LG G          S    TP+LI+
Sbjct: 404 FSLIF-----------------GQVWSWGDGDYGKLGRGG---------SDGCKTPKLIE 437

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +L+ + V     G   S  + ++G+VY +G     ++      H R P L+  L
Sbjct: 438 KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGL 491


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4313 SAHTLAWSTSKPASAG 4328



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +++I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4231

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 48/320 (15%)

Query: 115 PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN---GQLGLGKKAAKVIPIPTK 170
           P++  GL    V QI+        ++ +G +Y    NS+    QL  G  +  +I I   
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKI--- 499

Query: 171 VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
                      A       +A+   G+V SWG G  GRLGHG    +           P+
Sbjct: 500 ----------AAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPK 540

Query: 231 LIKELEGVK----VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           +I    G +    V   A G  +SA I   G +Y +G     ++          P L++ 
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAG 600

Query: 287 LPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
           L   +  +V CG     T  +T  G++++WG  + G LG G  D   +P+ ++    +  
Sbjct: 601 LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLD 659

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V +V CG + + A++ +G++ +WG G +             +LGHG +    +P ++   
Sbjct: 660 VVKVRCGSQFSIALTKDGQVYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGL 707

Query: 402 ENVKALQVSCGFNHTGALLE 421
           +  K + V+ G  H  AL E
Sbjct: 708 QGKKVIDVAAGSTHCLALTE 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      RP +      +++  +ACG  HT  ++ +G ++    G ++ 
Sbjct: 291 WGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNA 350

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG    + + + P R+SG  +  +V+ ++ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 351 GLLGHGTEVSHWI-PKRVSGPLEGLQVLSVACGTWHSALATSNGKLFTFGDGTFGVLGHG 409

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
            + +  +P P +V+ LSG+ T + A G   + A+              K+ +WG G   R
Sbjct: 410 DRES--VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHR 467

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  A  
Sbjct: 468 LGHGSKETYL---------LPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYG 518

Query: 269 KMLFQEGN---HARRPSLI-SKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN     R P L+  KL   + EE+ CG YH  VLTS  E++TWG   NG LG 
Sbjct: 519 QL----GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGH 574

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G  +   SP  V+    +  V  +SCG   TA+I
Sbjct: 575 GDTEDRRSPTFVEA-LKDRNVKSISCGSNFTASI 607



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 158/360 (43%), Gaps = 40/360 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACG  H   +T  G V+  G    G+LG   +  +S   L        V  ++ G +H+
Sbjct: 272 IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHT 331

Query: 136 SAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAV 192
            A++  G+L+ WG  ++  G LG G + +  IP   +V   L G+     A G   S   
Sbjct: 332 CAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIP--KRVSGPLEGLQVLSVACGTWHSALA 389

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  GK+ ++G G  G LGHG   S+           PR ++ L G+K    A G  H+A 
Sbjct: 390 TSNGKLFTFGDGTFGVLGHGDRESV---------PYPREVQILSGLKTIKVACGVWHTAA 440

Query: 253 IDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGGYHT 300
           I E          + +++ +GD    ++          P+ +S L  Y+  ++ CG   T
Sbjct: 441 IIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 500

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEG 359
             LT+ G ++T G    G LG   +     P  VQ       V+++SCG  H A + S  
Sbjct: 501 VALTTSGHVFTMGGTAYGQLG-NPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRS 559

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ TWG G +            G+LGHG+  D   PT V   ++     +SCG N T ++
Sbjct: 560 EVFTWGRGAN------------GRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASI 607



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 133/303 (43%), Gaps = 51/303 (16%)

Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPIPTKVECLSG--------IFTKQAALGFEQSVAV 192
           G++Y+WG+   +G L  G     V P P K++ L+         +   Q A G      V
Sbjct: 227 GDVYVWGEVWCDGVLPDGS----VSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V +WG    GRLGHG ++    F R      P L++ L    V   A G  H+  
Sbjct: 283 TRQGEVFTWGEESGGRLGHGIDND---FSR------PHLVEFLAVNNVDFVACGEYHTCA 333

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGG 307
           +  +G ++ +GD   +  L   G       P  +S      +V+   CG +H+ + TS G
Sbjct: 334 VSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSNG 393

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA-----------I 356
           +L+T+G    G LG G  + +  P  VQ   S     +V+CG  HTAA           I
Sbjct: 394 KLFTFGDGTFGVLGHGDRESVPYPREVQI-LSGLKTIKVACGVWHTAAIIEVMSQSGTNI 452

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  K+ TWG G  H            +LGHG+   Y+ PT V+   +    Q++CG   T
Sbjct: 453 SSRKLFTWGDGDKH------------RLGHGSKETYLLPTCVSALIDYNFHQLACGHTMT 500

Query: 417 GAL 419
            AL
Sbjct: 501 VAL 503



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 19/202 (9%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V   A G  H A +   G V+ +G+ +  ++     N   RP L+  L
Sbjct: 257 TPKSLESNVVLDVHQIACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFL 316

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
             +  + V CG YHTC +++ G+L+TWG  ++  G LG G+ +V H  P+RV GP     
Sbjct: 317 AVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGT-EVSHWIPKRVSGPLEGLQ 375

Query: 343 VDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  V+CG  H+A A S GK+ T+G     GTF        G LGHG+     +P  V   
Sbjct: 376 VLSVACGTWHSALATSNGKLFTFG----DGTF--------GVLGHGDRESVPYPREVQIL 423

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
             +K ++V+CG  HT A++E +
Sbjct: 424 SGLKTIKVACGVWHTAAIIEVM 445



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 77/153 (50%), Gaps = 6/153 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG GS E+   P   SA   ++   LACG   T+ LT +G V+  G   +GQ
Sbjct: 460 WGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVFTMGGTAYGQ 519

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   + G  L  L    L  E V +IS G +H + +T   E++ WG+ +NG+LG G   
Sbjct: 520 LGNPLSDGR-LPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTE 578

Query: 162 AKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
            +    PT VE L     K  + G  F  S+ +
Sbjct: 579 DRR--SPTFVEALKDRNVKSISCGSNFTASICI 609


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/273 (31%), Positives = 134/273 (49%), Gaps = 21/273 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S     K+V++++ G +HS  +T DGE+Y WG N++GQ+G G  A + I
Sbjct: 111 TTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAI 170

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P      CL        A G   SVAV   G+V  WG  G+G+LG G          S +
Sbjct: 171 PRRV-TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGS---------SGN 220

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
           + TP  +  L+G++V+  A GF H+  + + G+VY +G  +  ++    GN + +    P
Sbjct: 221 QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPTP 278

Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            ++ K    E   C   HT    T GG +Y WG
Sbjct: 279 VVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  +LE
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGD-VQSTLE 64

Query: 115 PLRISGL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N   QLG G     ++P      
Sbjct: 65  PRRLDSLSDKKIACLSYGSGPHIILATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGS---------TANQAIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 235 VQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 293

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 294 STHTSAAKTQGGHVYMWG 311



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG ++ST E  PR +  L   K+   + G   H  
Sbjct: 38  TINDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHII 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
                G V+ +G     ++     NH   P  +S    +++V+   CG YH+ VLTS GE
Sbjct: 89  LATTEGEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           +Y WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 149 VYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVWGYN 208

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CGF HT  L +
Sbjct: 209 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTD 250



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           T++ E+++ G N +G LGLG   + + P   +++ LS    K A L +      +  T  
Sbjct: 38  TINDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIILATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG  G  +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 146 DGEVYAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSVAVVDTGEVYVW 205

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG      
Sbjct: 206 GYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGFAHTLVLTDEGQVYAWG------ 258

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 299



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 178/364 (48%), Gaps = 33/364 (9%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEK-HSLKALACGGAHTLFLTETGCVYATGLND 99
           WGN   G LGLG +E  +   P     FE  +++K++ACG  HTL +TE G +YA G ND
Sbjct: 4   WGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGSND 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           FGQLG   + G   +  +I G++  V+  ++ G  HS A+   G+LY WG +S GQLGL 
Sbjct: 64  FGQLG---HDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLGLE 120

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                +   P  V+ L+ +   Q + G++  +A+T  G++ +WG+   G+LG G     +
Sbjct: 121 TDEG-IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNV 179

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P L+  L G+ +   A G  HS  + ++G V+ +G     ++        
Sbjct: 180 S--------KPTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL 231

Query: 279 RRPSLISKLPYSE-EVVCGGYHTCV-LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
             P+ +  +   + + + GG    V LT  G ++T G+   G LG GS      P +V  
Sbjct: 232 SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVL- 290

Query: 337 PFSESPVDQVSCGWKHTAAI--SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
               S V QV+CG +HT  +  S+G++ ++G G            S GQLG  + ++   
Sbjct: 291 ELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLG------------SVGQLGTKSSINSNT 338

Query: 395 PTIV 398
           P +V
Sbjct: 339 PQLV 342



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 141/298 (47%), Gaps = 16/298 (5%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+ D+G+LG     ++ + +     E   + ++ACG AH++ L E G +Y  G +  GQL
Sbjct: 60  GSNDFGQLGHDGCRTKLQKI--PGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQL 117

Query: 104 GISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           G+  + G   +P  +  L   + VQIS GY H  A+T  GELY WG N  GQLGLG    
Sbjct: 118 GLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPG 177

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V   PT V  L G+     A G   S  V+  G V  WG    G+LG   ++S+     
Sbjct: 178 NVSK-PTLVNSLVGLPISFIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSL----- 231

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                +P  +K +  VKVK  A G   S  +  +G V+  G     ++     ++   P 
Sbjct: 232 ----SSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPR 287

Query: 283 LISKLPYS--EEVVCGGYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
            + +L  S   +V CG  HT  L  S G +Y++G    G LG  S    ++P+ V GP
Sbjct: 288 KVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLVLGP 345



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 66/327 (20%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKV---ECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           +Y WG   NG+LGLG      I  P ++   E ++ I  K  A G   ++AVT  G++ +
Sbjct: 1   MYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNI--KSVACGNNHTLAVTEDGQLYA 58

Query: 201 WGAGGSGRLGH-----------GQESSIL-----GFLRSTS------------------- 225
            G+   G+LGH           G ES ++     G   S +                   
Sbjct: 59  CGSNDFGQLGHDGCRTKLQKIPGVESLVMTSVACGEAHSMALNEWGQLYTWGSDSCGQLG 118

Query: 226 -------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGNH 277
                  +Y P+++K L  + +   + G+ H   +  +G +Y +G +      L     +
Sbjct: 119 LETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGN 178

Query: 278 ARRPSLISK---LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +P+L++    LP S  + CGGYH+ V++  G ++ WG N+ G LGI S   L SP ++
Sbjct: 179 VSKPTLVNSLVGLPIS-FIACGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQL 237

Query: 335 QGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           +       V  ++ G   +  ++ +G + T G G              GQLGHG+  + I
Sbjct: 238 KT-IRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMY------------GQLGHGSFSNEI 284

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALL 420
            P  V         QV+CG  HT  L+
Sbjct: 285 VPRKVLELMGSTVTQVTCGRRHTLTLV 311


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
           WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 206 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 263

Query: 101 GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 264 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 321

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
            G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 322 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 376

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 377 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430

Query: 275 GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 431 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 490

Query: 333 RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 491 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 537

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 538 IQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57  ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 272 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 330

Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 331 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 388

Query: 174 LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 389 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 439

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 440 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 499

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 500 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 558

Query: 350 WKHTAAISEGKILTWG 365
             HT A S  K  + G
Sbjct: 559 SAHTLAWSTSKPASAG 574



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 201 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 259

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 260 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 319

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 320 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 370

Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 371 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 430

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
            D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 431 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 477

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           LGHG+D     P  V   +  K + ++ G  H
Sbjct: 478 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 509


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3988 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4045

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4046 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4103

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4104 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4158

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4159 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4213 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4272

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4273 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4319

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4320 IQRPRLVAALQGKKVNRVACGSAHTLA 4346



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4054 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4112

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4113 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4170

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4171 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4221

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4222 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4281

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4282 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4340

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4341 SAHTLAWSTSKPASAG 4356



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3983 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4041

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4042 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4101

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4102 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4152

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4153 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4212

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4213 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4259

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4260 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4291



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 172/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 4017

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            +LG+      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 4018 RLGVGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 4075

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G ++      P  +E L G      A G   S  VT  G + +WG G  GRLGH      
Sbjct: 4076 GNRSP--CDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 4129

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                 S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 4130 -----SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4184

Query: 276  NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 4185 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4244

Query: 334  VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            VQG      V  ++ G  H    SE G++ TW            G +  GQLG G     
Sbjct: 4245 VQG-LQGKKVIAIATGSLHCVCCSEDGEVYTW------------GDNDEGQLGDGTTNAI 4291

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 4292 QRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4084 PRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4142 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    +  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4312 SAHTLAWSTSKPASAG 4327



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 132/332 (39%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4230

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L      C  R ++ T ++     WG    GRLG G+     RP +  +     
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309

Query: 73  LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           +  ++CG  HT  +T +G ++    G  + G LG    + Y L P ++SG  +  +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS+  T  G+LY +G  + G LG G +  + +  P +VE LSG  T + A G   
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+      TG      K+ +WG G   RLGHG +   L          P+ ++ L   
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
                A G   +  +  +GRV+  G  + +  L    +  ++P L+     SE   E+ C
Sbjct: 478 DFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H  VLTS  E+YTWG   NG LG G +     P  V+    +  V  +SCG   T  
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595

Query: 356 I 356
           I
Sbjct: 596 I 596



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 162/368 (44%), Gaps = 50/368 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           +  +ACG  H    T  G V+  G    G+LG   +   S  P  +  L   VV  IS G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADIS-RPKLVESLSLTVVDLISCG 316

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
             H+ A+T  G+L+ WG  S   G LG G + +    +P KV   L G+     A G   
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS--YWLPKKVSGPLEGLQVLSVACGSWH 374

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S   T  GK+ ++G G  G LGHG         R T  Y P+ ++ L G K    A G  
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGD--------RETLAY-PKEVEALSGFKTIKVACGIW 425

Query: 249 HSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYS-EE 292
           HSA I E          + ++Y +GD   +++    G+  + P L+ K     L Y   +
Sbjct: 426 HSAAIVEVTNQTGANVMSKKLYTWGDGDKNRL----GHGDKEPRLVPKCVQALLEYDFHQ 481

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG   T  L + G ++T GS+ NG LG    D    P  VQ   +   V+++SCG  H
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDG-KQPCLVQDRLASELVEEISCGASH 540

Query: 353 -TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            T   S  ++ TWG G +            G+LGHG+  D   P +V   ++     +SC
Sbjct: 541 VTVLTSRSEVYTWGMGAN------------GRLGHGDLKDRKKPCLVEALKDRHVKSISC 588

Query: 412 GFNHTGAL 419
           G N T  +
Sbjct: 589 GSNFTTCI 596



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 45/300 (15%)

Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           G++Y+WG+       S+G          V+ IP  +E    +   Q A G       T  
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG    GRLGHG ++ I           P+L++ L    V + + G  H+  +  
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
           +G ++ +GD + +  L   G       P  +S      +V+   CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
           T+G    G LG G  + L  P+ V+   S     +V+CG  H+AAI E            
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           K+ TWG G  +            +LGHG+    + P  V         Q++CG N T AL
Sbjct: 445 KLYTWGDGDKN------------RLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVAL 492



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 17/198 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H A     G V+ +G+    ++         RP L+  L 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  + + CG +HTC +T+ G+L+ WG  S   G LG G+      P++V GP     V 
Sbjct: 307 LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVL 366

Query: 345 QVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            V+CG W      S GK+ T+G     GTF        G LGHG+     +P  V     
Sbjct: 367 SVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAYPKEVEALSG 414

Query: 404 VKALQVSCGFNHTGALLE 421
            K ++V+CG  H+ A++E
Sbjct: 415 FKTIKVACGIWHSAAIVE 432


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCG--GYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             + ++ P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGTRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGSKVPMK 4192

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4312 SAHTLAWSTSKPASAG 4327



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 777



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG+G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGTRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 117/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLG G E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4184 SDGSKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4230

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LGLG 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 LGI--SENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG+   E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGLGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 747 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 776



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 608

Query: 409 VSCG 412
           V+CG
Sbjct: 609 VACG 612



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/233 (25%), Positives = 87/233 (37%), Gaps = 71/233 (30%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G+V SWG G  GRLGHG    +           P++I    G            
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGK----------- 548

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                                  Q G H               + CG  ++  +T+ GEL
Sbjct: 549 -----------------------QAGKHVVH------------IACGSTYSAAITAEGEL 573

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISE-GKILTWGW 366
           YTWG    G LG GS +    P  V G      +D V+CG     T A++E G++  W W
Sbjct: 574 YTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID-VACGSGDAQTLAVTENGQV--WSW 630

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G        DG    G+LG G       P ++   +++  ++V CG   + AL
Sbjct: 631 G--------DGDY--GKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 673


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 28/342 (8%)

Query: 44  GNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGCVYATGLNDF 100
           GN   G+LGLG + E   R +      K+ LK   +ACG  H++ L + G V++ G NDF
Sbjct: 22  GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDF 81

Query: 101 GQLG---------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            QLG         + EN+ + ++ ++ S +   V+ ++ G  H  A+T DG L+ WG N 
Sbjct: 82  YQLGHDGIKRKPNLYENLHWYID-VKQSFVGIHVISVACGDAHCVALTNDGHLFSWGSNV 140

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLG 210
            GQLG+ +          +++ ++     Q A G   S+A+     VL +WG    G+LG
Sbjct: 141 YGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLG 200

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G   S +G         P  + +L G+ +   AAG  HS  +  +G V+ +G     ++
Sbjct: 201 IGTRESFIG---------PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQI 251

Query: 271 LFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
              E      PSL+ KL  +++V+   CG   +  +T+ G L+T+G+   G LG G+ + 
Sbjct: 252 GQNEQRDILYPSLV-KLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNS 310

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGS 369
              P++V        +D V+CG  HT AI+E K+  +G   S
Sbjct: 311 ELFPKQVMELMGSVVLD-VACGRCHTLAITENKLYAFGLNTS 351



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 116/225 (51%), Gaps = 17/225 (7%)

Query: 43  WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTET-GCVYATGLND 99
           WG+  YG+LG+  +   ++ R          ++  +ACG  H+L L  T G ++A GLND
Sbjct: 136 WGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLND 195

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLGI     + + P  ++ L    + Q++ G  HS  +T  G ++ WGKN  GQ+G  
Sbjct: 196 HGQLGIGTRESF-IGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIG-- 252

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           +   + I  P+ V+ L      + A G + SVAVT  G + ++GAG  G+LGHG ++   
Sbjct: 253 QNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQN--- 309

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 SE  P+ + EL G  V   A G  H+  I EN ++Y FG
Sbjct: 310 ------SELFPKQVMELMGSVVLDVACGRCHTLAITEN-KLYAFG 347



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 8/210 (3%)

Query: 5   SLTAMTKYYLKQDIKLGSKLGI-CKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWR 61
           ++ A  +Y   Q+I L + + I C    S  L+     L  WG  D+G+LG+G+ ES   
Sbjct: 150 NVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQLGIGTRESFIG 209

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P   +      +  LA G +H+L LT +G V+  G N FGQ+G +E     L P  +  L
Sbjct: 210 PTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRDI-LYPSLVKLL 268

Query: 122 K-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           + ++V++++ G   S A+T  G L+ +G  + GQLG G + +++   P +V  L G    
Sbjct: 269 RTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHGNQNSEL--FPKQVMELMGSVVL 326

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
             A G   ++A+T   K+ ++G   SG+LG
Sbjct: 327 DVACGRCHTLAIT-ENKLYAFGLNTSGQLG 355



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 146/336 (43%), Gaps = 37/336 (11%)

Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLG   I+E    SL  +  +    ++ QI+ G HHS  +  DG ++  G N   QLG 
Sbjct: 27  GQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGH 86

Query: 158 G--KKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
              K+   +       I  K +   GI     A G    VA+T  G + SWG+   G+LG
Sbjct: 87  DGIKRKPNLYENLHWYIDVK-QSFVGIHVISVACGDAHCVALTNDGHLFSWGSNVYGQLG 145

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE-NGRVYIFGDRAVDK 269
             + + +     + + Y PR I+E+    +   A G  HS  ++  +G ++ +G     +
Sbjct: 146 VERMNVV-----AKARY-PR-IQEINLANIVQIACGSNHSLALESTDGVLHAWGLNDHGQ 198

Query: 270 MLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           +          P+ ++KL   P   ++  G  H+ VLT  G ++ WG N  G +G     
Sbjct: 199 LGIGTRESFIGPTTVNKLMGIPIC-QLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQR 257

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +  P  V+       V +++CG   + A++  G + T+G G            + GQLG
Sbjct: 258 DILYPSLVK-LLRTQKVIRLACGEDFSVAVTATGGLFTFGAG------------TYGQLG 304

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           HGN    + P  V        L V+CG  HT A+ E
Sbjct: 305 HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITE 340



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G++G         P +        +  LACG   ++ +T TG ++  G   +GQ
Sbjct: 243 WGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQ 302

Query: 103 LGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLG-LGKK 160
           LG   N    L P ++  L   VV  ++ G  H+ AIT + +LY +G N++GQLG L  K
Sbjct: 303 LG-HGNQNSELFPKQVMELMGSVVLDVACGRCHTLAIT-ENKLYAFGLNTSGQLGLLNVK 360

Query: 161 AAKVIPIPTKVE 172
               IP+P  +E
Sbjct: 361 HTTSIPLPIPIE 372


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2969 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3028

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3029 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3087

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3088 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3139 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3198

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3199 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3245

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3246 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3282



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 175/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3967 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4024

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4025 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4082

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4083 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4137

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G  V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4138 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4192 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4251

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4252 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4298

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4299 IQRPRLVAALQGKKVNRVACGSAHTLA 4325



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3007 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3066

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3067 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3124

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3125 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3175

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3176 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3235

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3236 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3290

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3291 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4033 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4091

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4092 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4149

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4150 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4200

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4201 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4260

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4261 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4319

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4320 SAHTLAWSTSKPASAG 4335



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3025 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3084

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3085 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3143

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3144 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3197

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3198 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3252

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3253 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3312

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3313 G-LEGQKITRVACGSSHSVA 3331



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3079 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3138

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3139 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3196

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3197 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3253

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3254 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3302

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3303 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3334



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3018

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3070

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3071 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3130

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3131 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3186

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3187 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3228



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3962 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4020

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4021 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4080

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4081 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4131

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L   +  +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4132 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4191

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4192 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4238

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4239 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4270



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPVLVAGLKGLKVIDVACG 612


>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 395

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 185/413 (44%), Gaps = 65/413 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LG+GS E +    +  A + H ++++  G  ++L + + G ++  G N    
Sbjct: 10  WGSGEDGQLGIGSNEEKEWVCLVKALQPHRIRSVVAGSRNSLAIADDGKLFTWGWNQRAT 69

Query: 103 LG-----ISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQL- 155
           LG      SEN   +  P ++  L   ++VQ + G  H  A+   G  Y WG N  GQ  
Sbjct: 70  LGHPAETKSENKTENT-PSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 128

Query: 156 -------GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                  G G+   + I IP +  C   +  +Q A G   SV +T  G V +WG      
Sbjct: 129 EEPERKDGTGRPLRRDIEIPQR--CAPKLVVRQVAAGGTHSVVLTREGHVWTWG------ 180

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                +    G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    
Sbjct: 181 -----QPWPPGDIKQIS--VPVRVQGLE--NVRLIAVGAFHNLALQEDGTLWAWGNNEYG 231

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G  D
Sbjct: 232 QLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSD 291

Query: 327 VLHS--PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ 383
                 P++VQ    E  V QVSCG  H+ A++ +G + ++G  G H           G+
Sbjct: 292 KSSKMVPQKVQLLAGEDIV-QVSCGGTHSVALTRDGHMFSFG-RGDH-----------GR 338

Query: 384 LGHGNDVDYIHPTIVNF--------------GENVKALQVSCGFNHTGALLEY 422
           LG+G  V    P  V                G  +  L V+CG  HT A++E+
Sbjct: 339 LGYGRKVTTGQPMEVPIDLPPPQDPSGTATEGHWIAKL-VACGGRHTLAIVEW 390



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 138/340 (40%), Gaps = 36/340 (10%)

Query: 92  VYATGLNDFGQLGISEN-------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           + A G  + GQLGI  N       +  +L+P RI         +  G  +S AI  DG+L
Sbjct: 7   IIAWGSGEDGQLGIGSNEEKEWVCLVKALQPHRIR-------SVVAGSRNSLAIADDGKL 59

Query: 145 YMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           + WG N    LG     K   K    P++V+ LS +   QAA+G    +AV   G+  +W
Sbjct: 60  FTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVKIVQAAIGGWHCLAVDDQGRAYAW 119

Query: 202 GAGGSGRLGHGQESS--ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           G    G+ G   E        LR   E   R   +L    V+  AAG  HS  +   G V
Sbjct: 120 GGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKL---VVRQVAAGGTHSVVLTREGHV 176

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           + +G       + Q       P  +  L     +  G +H   L   G L+ WG+NE G 
Sbjct: 177 WTWGQPWPPGDIKQ----ISVPVRVQGLENVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 232

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
           LG G       P RVQG    + VD  + GW  TA   EG++  WG  G HG        
Sbjct: 233 LGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHSTALTDEGEVYGWG-RGEHGRLG----- 286

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                G  +    + P  V        +QVSCG  H+ AL
Sbjct: 287 ----FGDSDKSSKMVPQKVQLLAGEDIVQVSCGGTHSVAL 322


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 3028 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3087

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3088 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3146

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3147 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3198 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3257

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3258 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3304

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3305 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3341



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 4025 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4082

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4083 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4140

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4141 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4195

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4196 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4250 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4309

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4310 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4356

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4357 IQRPRLVAALQGKKVNRVACGSAHTLA 4383



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3066 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3125

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3126 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3183

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3184 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3234

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3235 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3294

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3295 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3349

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3350 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4091 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4149

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4150 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4207

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4208 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4258

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4259 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4318

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4319 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4377

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4378 SAHTLAWSTSKPASAG 4393



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3084 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3143

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3144 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3202

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3203 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3256

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3257 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3311

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3312 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3371

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3372 G-LEGQKITRVACGSSHSVA 3390



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 573 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 631

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 632 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 689

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 690 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 740

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 741 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 800

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 801 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDS---------KHIVGIACGPAQSFAW 845



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3138 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3197

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3198 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3255

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3256 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3312

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3313 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3361

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3362 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3393



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 559

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 560 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 615

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 616 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 663

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 782

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 783 VAAGSTHCLALTEDSEVHSWG 803



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 588 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 646

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 647 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 706 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 763

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 764 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 803



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 132/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 3020 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3077

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3129

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3130 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3189

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3190 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3245

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3246 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3287



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 4020 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4078

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4079 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4138

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4139 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4189

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4190 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4249

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4250 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4296

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4297 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 644 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 703

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 704 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 762

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 763 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 805



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 577 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 627

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 628 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 687

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 688 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 746

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 747 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 794

Query: 421 E 421
           E
Sbjct: 795 E 795



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 8/152 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 757

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 758 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 814

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  K  P PT +  L        A G  QS A
Sbjct: 815 RVTK--PEPTALPGLDSKHIVGIACGPAQSFA 844



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 517 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 572

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 573 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 628

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 629 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 676

Query: 409 VSCG 412
           V+CG
Sbjct: 677 VACG 680


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGLSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 148/321 (46%), Gaps = 23/321 (7%)

Query: 44   GNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLND 99
            G    GRLGLG L S   P+    +A   + +K +A   GG H   LT  G V++ G  D
Sbjct: 3018 GEATNGRLGLG-LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGD 3076

Query: 100  FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G
Sbjct: 3077 DGKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 3135

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G    
Sbjct: 3136 DNTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG--- 3190

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                  S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      
Sbjct: 3191 ------SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDV 3244

Query: 277  HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
            H R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  V
Sbjct: 3245 HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLV 3304

Query: 335  QGPFSESPVDQVSCGWKHTAA 355
            QG      + +V+CG  H+ A
Sbjct: 3305 QG-LEGQKITRVACGSSHSVA 3324



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4143 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4313 SAHTLAWSTSKPASAG 4328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 134/297 (45%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4231

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 161/348 (46%), Gaps = 51/348 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G +GRLG         P +  +     +K +ACG  HT  LT++G VY  G ND   
Sbjct: 328 WGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWG-NDVCC 386

Query: 103 LG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
                        I + +G SL+ + IS        ++ G  H++ ++  G L+ +G  +
Sbjct: 387 ADLLIEGRTRSQWIPQKLGGSLDGISISS-------VACGEWHTAIVSSCGRLFTYGDGT 439

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV-----------TGGGKVLS 200
            G LG G    +    P +VE LSG+  + AA G   + A+           +  GK+ +
Sbjct: 440 FGVLGHGD--LRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFT 497

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  GRLGH         + + S+  P  + +L        + G + +  +   G+V+
Sbjct: 498 WGDGDEGRLGH---------VDNGSKLVPTRVTQLVDYDFVQVSCGRMLTVALTNMGKVF 548

Query: 261 IFGDRAVDKMLFQEGN-HARRPSLISKLPYSEEVV----CGGYHTCVLTSGGELYTWGSN 315
             G     ++    GN HAR  +++ +    +E V     G YH  VLTSGG +YTWG  
Sbjct: 549 AMGSAKYGQL----GNPHARDKAVMVEGQLKQEFVKVISTGSYHVAVLTSGGSVYTWGRG 604

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
           ENG LG+G  +  ++P  V+    +  V+ ++CG   TAAIS  K ++
Sbjct: 605 ENGQLGLGDTEDRYTPCFVEA-LRDRQVNTITCGPSFTAAISLHKPIS 651



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 165/362 (45%), Gaps = 44/362 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GG H    T+ G V+  G   +G+LG   ++  S   +  S     V  ++ G +H+
Sbjct: 309 IALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHT 368

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTG 194
            A+T  GE+Y WG +      L +   +   IP K+   L GI     A G   +  V+ 
Sbjct: 369 CALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSS 428

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G++ ++G G  G LGHG        LRS S  +P+ ++ L G++V+ AA G  H+A I 
Sbjct: 429 CGRLFTYGDGTFGVLGHGD-------LRSYS--SPKEVESLSGLRVRSAACGSWHTAAIV 479

Query: 255 E-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           E           +G+++ +GD    ++   +      P+ +++L   +  +V CG   T 
Sbjct: 480 EVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTV 539

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPER---VQGPFSESPVDQVSCGWKHTAAISE 358
            LT+ G+++  GS + G LG       H+ ++   V+G   +  V  +S G  H A ++ 
Sbjct: 540 ALTNMGKVFAMGSAKYGQLGNP-----HARDKAVMVEGQLKQEFVKVISTGSYHVAVLTS 594

Query: 359 G-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           G  + TWG G              GQLG G+  D   P  V    + +   ++CG + T 
Sbjct: 595 GGSVYTWGRG------------ENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTA 642

Query: 418 AL 419
           A+
Sbjct: 643 AI 644



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 118/259 (45%), Gaps = 17/259 (6%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E  + +     ALG + +   T  G+V  WG G  GRLG   +  I         
Sbjct: 294 VPKLLESTAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDI--------- 344

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            +P+++  L G+ VK  A G  H+  + ++G VY +G+      L  EG   R   +  K
Sbjct: 345 SSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEG-RTRSQWIPQK 403

Query: 287 LPYS------EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           L  S        V CG +HT +++S G L+T+G    G LG G +    SP+ V+   S 
Sbjct: 404 LGGSLDGISISSVACGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVES-LSG 462

Query: 341 SPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
             V   +CG  HTAAI E     + +  + G     G    G+LGH ++   + PT V  
Sbjct: 463 LRVRSAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQ 522

Query: 401 GENVKALQVSCGFNHTGAL 419
             +   +QVSCG   T AL
Sbjct: 523 LVDYDFVQVSCGRMLTVAL 541



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 22/232 (9%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V+ WG G    +G   E  +   + S     P+L++    + V   A G  H+A   + G
Sbjct: 267 VMIWGGGIGCLVGIVNERFVQPRIYS---LVPKLLESTAMLDVHNIALGGKHAALATKQG 323

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSN 315
            V+ +G     ++  +       P ++  L   + + V CG YHTC LT  GE+YTWG N
Sbjct: 324 EVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKNVACGEYHTCALTDSGEVYTWG-N 382

Query: 316 ENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
           +  C  +   G       P+++ G      +  V+CG  HTA +S  G++ T+G     G
Sbjct: 383 DVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGEWHTAIVSSCGRLFTYG----DG 438

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           TF        G LGHG+   Y  P  V     ++    +CG  HT A++E +
Sbjct: 439 TF--------GVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVEVM 482


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG + 
Sbjct: 92  GCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 150

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S   + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 208

Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 259

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++ TP  I  L+G++V+  A G  H+  + + G++Y +G  +  ++     ++   P+ +
Sbjct: 260 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 319

Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           +  K    E   C   HT    T  G++Y WG
Sbjct: 320 TVDKDRVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 142/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++TE   V+  G+N  G LG  + I  ++E
Sbjct: 46  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-IQSTIE 104

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G     ++P      
Sbjct: 105 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 164

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 165 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 214

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 215 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 274

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  V+  +C 
Sbjct: 275 VQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVD-KDRVVEIAACH 333

Query: 350 WKHTAA--ISEGKILTWG 365
             HT+A     G++  WG
Sbjct: 334 SAHTSAAKTQSGQVYMWG 351



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 26/235 (11%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           VT   +V   G   SG LG G        ++ST E  P+ +  L G K+   + G   H 
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGD-------IQSTIE--PKRLDSLCGKKIACLSYGSGPHV 127

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
               E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS G
Sbjct: 128 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 187

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
           E+YTWG N +G +G GS      P RV        V  ++CG   + A+ E G++  WG+
Sbjct: 188 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 247

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G+            GQLG G+  +   P  +   + ++  +V+CG  HT  L +
Sbjct: 248 NGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD 290



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 32/288 (11%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
           +T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T 
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGDIQSTIEP--KRLDSLCG--KKIACLSYGSGPHVVLATE 132

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG     +LG+G  +  L   + ++    + + E+        A G  HS  + 
Sbjct: 133 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV--------ACGSHHSMVLT 184

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
            +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y 
Sbjct: 185 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 244

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
           WG N NG LG+GS     +P R+        V +V+CG  HT  ++ EG+I  WG     
Sbjct: 245 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWG----- 298

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                   +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 299 -------ANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSA 339



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 244 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 303

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  VV+I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 304 QLGTGNKSNQSY-PTTVTVDKDRVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 356

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 357 --SVVLPHLTHFACTDDVF 373


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 175/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3960 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4017

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4018 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4075

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4076 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4130

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G  V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4131 ------SEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4185 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4244

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4245 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4291

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4292 IQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4026 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4084

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4085 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4142

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4143 LQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4193

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4194 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4253

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4254 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4312

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4313 SAHTLAWSTSKPASAG 4328



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 134/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4073

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4074 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4124

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L   +  +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4125 RLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4184

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4185 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4231

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4232 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    PV+ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPVLVAGLKGLKVIDVACG 612


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGG---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS-- 282
           ++ TP  +  L+G++V+ AA G+ H+  + + G+VY++G  +  ++    GN + +P   
Sbjct: 244 NQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQPYPT 301

Query: 283 --LISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
             ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K+V  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGNGQLGLGGSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            +   CG  HT VLT  G++Y WG+N  G LG G+      P  +     +  ++  +C 
Sbjct: 259 VQRAACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQPYPTPIIVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 STHTSAAKTQGGHVYMWG 335



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G KV   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLTGKKVACLSYGSGPHVVLATSEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG   + A+ + G++  WG+ G+            GQLG G   + 
Sbjct: 198 VTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSGN------------GQLGLGGSGNQ 245

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   + ++  + +CG+ HT  L +
Sbjct: 246 PTPCRVAALQGIRVQRAACGYAHTLVLTD 274



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLG   ++  P   +A +   ++  ACG AHTL LT+ G VY  G N +G
Sbjct: 228 VWGYSGNGQLGLGGSGNQPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG + N      P  I   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLG-TGNKSNQPYPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|12844231|dbj|BAB26286.1| unnamed protein product [Mus musculus]
 gi|148700107|gb|EDL32054.1| hect domain and RLD 4, isoform CRA_d [Mus musculus]
          Length = 233

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 122/237 (51%), Gaps = 15/237 (6%)

Query: 43  WGNGDYGRLGLGSLESR--WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WGN  YG+LGLG ++      P     F    ++ + CG  HT+F+ + G VY  G ND 
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG  ++     +P ++  L  + +V ++ G  H+ A+   G++Y WG +S+GQLGL +
Sbjct: 64  GQLGHEKS---RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL-Q 119

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + + I +P  ++ LS I   Q A G+  S+A++   +V  WG    G+LG G       
Sbjct: 120 GSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLG------- 172

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +    + +P+LIK L G+     AAG  HS  +  +G ++ +G     ++   + N
Sbjct: 173 -IDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDEN 228



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 21/245 (8%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +  WG  S GQLGLG    +++  P + +       +    G   +V V   G V + G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH             S   P  +  L+   +   A G  H+  +++ G+VY +G
Sbjct: 61  NDLGQLGH-----------EKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWG 109

Query: 264 DRAVDKMLFQEGNHA-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCL 320
             +  ++  Q      R P  I  L   +  +V CG YH+  L+   E++ WG N+ G L
Sbjct: 110 LDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQL 169

Query: 321 GIGSIDVLH--SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG--GSHGTFSE 375
           G+G ID     SP+ ++      P  QV+ G  H+  ++  G I  WG    G  G   E
Sbjct: 170 GLG-IDCQKQTSPQLIKSLLG-IPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDE 227

Query: 376 DGHSS 380
           +G  +
Sbjct: 228 NGRCA 232



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG   + +  P +  +        +A GGAH+  LT +G ++  G N FG
Sbjct: 161 WGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFG 220

Query: 102 QLGISENIG 110
           QLG+++  G
Sbjct: 221 QLGLNDENG 229


>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Sarcophilus harrisii]
          Length = 612

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 175/400 (43%), Gaps = 44/400 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E    P   + F +   LK L  GG H+  +T+ G ++  GLN  G
Sbjct: 194 WGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNKDG 253

Query: 102 QLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+  +E++   +    ++G    V+Q+S G+  +  +T +G++   G NS GQLGL  
Sbjct: 254 QLGLGHTEDVLSFIPCTPLAGCP--VLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPP 311

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSGRLGHGQESSI 217
              + + IP  +E L+      AA G   ++A T  G V  WG G   +GR     E ++
Sbjct: 312 GTKRQV-IPQVIELLNEKVVCIAA-GMRHALAATESGLVFQWGTGLASTGRR-TCPEKTL 368

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             FL +     P  +  LE  KVK   AG  HSA + + G +Y++G     ++L      
Sbjct: 369 PPFLTAKE---PCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNKHGQLL-SPAAF 424

Query: 278 ARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLG---------IGS 324
              P  I    +  E V     G  H    T  G+++TWG  + G LG          G 
Sbjct: 425 LPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADYGQLGTKVDGQERCTGD 484

Query: 325 IDVLHSPERVQGPFSES-P----VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHS 379
            ++L S  R       S P    V +++CG +H  A+      +WGW            +
Sbjct: 485 HELLLSCTRTLATMPSSLPCLEGVTEMACGSEHNLAVVGSSCYSWGW------------N 532

Query: 380 SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             G  G G +V+   P  V        L V CG  H+ A+
Sbjct: 533 EHGMCGDGTEVNVWVPKPVESPSLALCLLVGCGAGHSLAV 572



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 147/342 (42%), Gaps = 44/342 (12%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LGLG  E     + C+      +  ++CG   T+ LTE G V + G N FGQLG+   
Sbjct: 253 GQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCGSNSFGQLGLPPG 312

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA--KVIP 166
               + P  I  L ++VV I+ G  H+ A T  G ++ WG    G    G++    K +P
Sbjct: 313 TKRQVIPQVIELLNEKVVCIAAGMRHALAATESGLVFQWG---TGLASTGRRTCPEKTLP 369

Query: 167 I------PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
                  P +V  L     K    G   S ++T  G++  WG+       HGQ  S   F
Sbjct: 370 PFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSN-----KHGQLLSPAAF 424

Query: 221 LRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA--------VDKM 270
           L      TP+ I+    +  KV +  +G+ H     E G+V+ +G RA        VD  
Sbjct: 425 L-----PTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWG-RADYGQLGTKVDGQ 478

Query: 271 LFQEGNH----------ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
               G+H          A  PS +  L    E+ CG  H   +  G   Y+WG NE+G  
Sbjct: 479 ERCTGDHELLLSCTRTLATMPSSLPCLEGVTEMACGSEHNLAVV-GSSCYSWGWNEHGMC 537

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           G G+   +  P+ V+ P S +    V CG  H+ A+ +   L
Sbjct: 538 GDGTEVNVWVPKPVESP-SLALCLLVGCGAGHSLAVGQAPAL 578



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 21/229 (9%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           +LSWGA   G+LG G +  +L   R      P+ +K L G        G  HSA + + G
Sbjct: 191 LLSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTG--------GGGHSAVVTDEG 242

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWG 313
            +++ G     ++    G+     S I   P +     +V CG   T +LT  G++ + G
Sbjct: 243 ELFVCGLNKDGQLGL--GHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTENGQVLSCG 300

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
           SN  G LG+          +V    +E  V  ++ G +H  A +E G +  WG G     
Sbjct: 301 SNSFGQLGLPPGTKRQVIPQVIELLNEK-VVCIAAGMRHALAATESGLVFQWGTG----- 354

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +  G  +  +      +    P  V   EN K   V  G  H+ +L +
Sbjct: 355 LASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTD 403



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 19/151 (12%)

Query: 42  LWGNGDYGRL-GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +WG+  +G+L    +     + +    F+   +  +  G  H +  TETG V+  G  D+
Sbjct: 409 VWGSNKHGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWTHLVARTETGKVFTWGRADY 468

Query: 101 GQLG----------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
           GQLG                +S     +  P  +  L+  V +++ G  H+ A+ V    
Sbjct: 469 GQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG-VTEMACGSEHNLAV-VGSSC 526

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
           Y WG N +G  G G +    +P P +   L+
Sbjct: 527 YSWGWNEHGMCGDGTEVNVWVPKPVESPSLA 557


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 26/304 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            G  + +G  +  ++     N    + +P  I  L       + CG  HT VL   G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
           T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 366 WGGS 369
            G S
Sbjct: 314 HGPS 317



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249

Query: 355 A-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
             I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  +  L  +     + G E +  +   GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG           +S GQL   G    V    P  +   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L++
Sbjct: 244 GDEHTAVLIQ 253



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   V+ IS G  H++ +  DG+++ +G NS+GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126

Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 397
              + QVSCG  H+ A+S + ++ +W            G +S GQLG G +V     P  
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V   E +   QV+ G  H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196


>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 176/403 (43%), Gaps = 56/403 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHS---LKALACGGAHTLFLTETGCVYATGLND 99
           WG G  G+LG   LE    P +       S   +  LACGGAH L LT  G V   G   
Sbjct: 25  WGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTWGRGT 84

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            GQLG  + +  SL+P  +  L+  V+  +S G+ HS  ++  G L+  G  S GQLG G
Sbjct: 85  SGQLGHGDMVS-SLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQLGHG 143

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---TG--GGKVLSWGAGGSGRLGHGQ 213
              +   P+  KV         Q A G   S+ +   TG  G +V  +G+G  G+LG   
Sbjct: 144 DCKSHCSPV--KVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGSGKRGQLGVSM 201

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
           +++     RS S   P+    LEGV++    A   HSA +  NG +Y +G        F 
Sbjct: 202 DNT-----RSIS--VPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG------FG 248

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG----------IG 323
             +    P  +       +V  G  H  VLT GGE++  G N +G LG          + 
Sbjct: 249 STSDVHCPRCLPSSLCFTQVALGWNHMLVLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLS 308

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL---TWGWGGSHGTFSEDGHSS 380
                 + E+VQG      V Q++ G +H+A ++ G IL   TWGWG             
Sbjct: 309 EESREENLEKVQG-LDGLNVVQIAAGAEHSALVT-GNILVIKTWGWG------------E 354

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKA----LQVSCGFNHTGAL 419
            GQLG GN  D I P  V  G  +      ++V CG   T A+
Sbjct: 355 HGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 397



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 111/236 (47%), Gaps = 21/236 (8%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSW 201
           E++ WG  ++GQLG  +   + +P    +   S        A G    +A+T  GKV++W
Sbjct: 21  EIWSWGAGTDGQLGTTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHVLALTTDGKVVTW 80

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G SG+LGHG   S L          P+ +K LE   +   +AG+ HS  + + G ++ 
Sbjct: 81  GRGTSGQLGHGDMVSSL---------QPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFT 131

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVL-----TSGGELYTWGS 314
            GD +  ++   +      P  +S     + +++ CG  H+ VL      SG ++Y +GS
Sbjct: 132 CGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSGDQVYGFGS 191

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVS--CGWKHTAAIS-EGKILTWGWG 367
            + G LG+ S+D   S    Q       V+ +S      H+AA+S  G + TWG G
Sbjct: 192 GKRGQLGV-SMDNTRSISVPQATVGLEGVEIISIDANGDHSAALSANGHLYTWGRG 246



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 17/143 (11%)

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE 340
           P   S  P S  + CGG H   LT+ G++ TWG   +G LG G +     P+ V+    E
Sbjct: 50  PRFSSAGPISL-LACGGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVK--LLE 106

Query: 341 SPV-DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           S V   VS GW H+  +S+ G + T G G            S GQLGHG+   +  P  V
Sbjct: 107 SFVMTHVSAGWSHSGFVSDTGCLFTCGDG------------SFGQLGHGDCKSHCSPVKV 154

Query: 399 NFGENVKALQVSCGFNHTGALLE 421
           ++ ++    Q++CG  H+  LL+
Sbjct: 155 SYFDSKHVDQIACGMRHSLVLLK 177


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2250 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2309

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2310 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2368

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2369 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2420 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2479

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2480 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2526

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2527 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2563



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3246 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3303

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3304 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3361

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3362 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3416

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3417 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3471 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3530

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 3531 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 3577

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 3578 IQRPRLVAALQGKKVNRVACGSAHTLA 3604



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2288 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2347

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2348 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2405

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2406 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2456

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2457 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2516

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2517 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 2571

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2572 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2306 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2365

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2366 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2424

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2425 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2478

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2479 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2533

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2534 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2593

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 2594 G-LEGQKITRVACGSSHSVA 2612



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3312 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3370

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3371 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3428

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3429 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3479

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3480 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3539

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3540 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3598

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 3599 SAHTLAWSTSKPASAG 3614



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2360 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2419

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2420 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2477

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2478 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2534

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 2535 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 2583

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2584 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2615



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2299

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2351

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2352 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2411

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2412 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2467

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2468 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2509



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3241 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3299

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3300 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3359

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3360 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3410

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3411 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3470

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3471 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3517

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3518 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3549


>gi|162453643|ref|YP_001616010.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
 gi|161164225|emb|CAN95530.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
          Length = 1134

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 172/392 (43%), Gaps = 48/392 (12%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG+G  GRLG GS   R  P   S        AL  G +HT  L  TG V   G   +G
Sbjct: 492 CWGSGANGRLGNGSTAGRTTPTPVSGLSD--AVALDAGESHTCALRATGAVVCWGEGQWG 549

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           +LG + +   +  P+ +S L  + V +  G  H+ A+   G +  WG+ +NGQLG G   
Sbjct: 550 RLG-NGSTADATTPVTVSNL-TDAVDVDAGGGHTCALRATGAVVCWGRGTNGQLGNGISG 607

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +  P+   V  L+   +  A  G   ++  TGG   + WG G  G+LG+G  SS+    
Sbjct: 608 DQSAPV--TVFGLNDAISISAGWGHSCALRATGG--AVCWGRGNHGQLGNGSTSSV---- 659

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFL----------HSACIDENGRVYIFGDRAVDKML 271
                YTP  +  L    V I A+ F           H+  +  NG V  +G     ++ 
Sbjct: 660 -----YTPVEVPNLSDA-VAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLG 713

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +   + +     +  L  +  V  G  HTC + S GE+  WG+ ++G +G GS      P
Sbjct: 714 YGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLP 773

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V    +     +++ G+ HT A+   G++  WG     G F        G+LG+G+  
Sbjct: 774 APV---VNLGDAVEIAAGYAHTCALRRNGQVECWG----EGEF--------GRLGNGSGA 818

Query: 391 DYIHPT-IVNFGENVKALQVSCGFNHTGALLE 421
           D   PT ++N      A  ++ G  HT ALL+
Sbjct: 819 DRTTPTPVLNL---TDAAHITAGTAHTCALLQ 847



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 169/410 (41%), Gaps = 78/410 (19%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G +GRLG GS      PV  S         +  GG HT  L  TG V   G    G
Sbjct: 542 CWGEGQWGRLGNGSTADATTPVTVSNLTD--AVDVDAGGGHTCALRATGAVVCWGRGTNG 599

Query: 102 QL--GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QL  GIS   G    P+ + GL  + + IS G+ HS A+   G    WG+ ++GQLG G 
Sbjct: 600 QLGNGIS---GDQSAPVTVFGL-NDAISISAGWGHSCALRATGGAVCWGRGNHGQLGNGS 655

Query: 160 KAAKVIPIPTKVECLSGIFTKQAA---------LGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            ++   P+  +V  LS     +A+           F  + A+   G V  WG G  G+LG
Sbjct: 656 TSSVYTPV--EVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLG 713

Query: 211 HGQESS------ILGF---------------LRSTSEYT--------------------P 229
           +G  SS      +L                 +RST E                      P
Sbjct: 714 YGAFSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLP 773

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
             +  L G  V+I AAG+ H+  +  NG+V  +G+    ++    G     P+ +  L  
Sbjct: 774 APVVNL-GDAVEI-AAGYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTTPTPVLNLTD 831

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
           +  +  G  HTC L   G++  WG    G LG GS D  ++P  V G    +    +S G
Sbjct: 832 AAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNTPVAVSG---LTDAVAISAG 888

Query: 350 WKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
             HT A+ + G++  W            G+++ G+LG+G+  D   P  V
Sbjct: 889 DAHTCAVRQNGQVSCW------------GYAALGRLGNGSTTDQTAPVTV 926



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 164/380 (43%), Gaps = 39/380 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
             WG G  G+LG G+  S    V     +    +A+A G +HT  +  TG +   G  D G
Sbjct: 703  CWGYGVDGQLGYGAFSSSEAGV--DVLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSG 760

Query: 102  QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            Q+G + +   +L P  +  L  + V+I+ GY H+ A+  +G++  WG+   G+LG G  A
Sbjct: 761  QIG-NGSAATALLPAPVVNLG-DAVEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGA 818

Query: 162  AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +  P P     L+         G   + A+   G+V  WG G  GRLG+G +       
Sbjct: 819  DRTTPTPV----LNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDD----- 869

Query: 222  RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  TP  +  L        +AG  H+  + +NG+V  +G  A+ ++          P
Sbjct: 870  ----RNTPVAVSGL--TDAVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAP 923

Query: 282  SLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              +  +  +  V  GG HTC L + G +  WG   +G LG  S      P  V G    S
Sbjct: 924  VTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGRLGNASTANSLRPVAVTG---LS 980

Query: 342  PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN- 399
                ++ G  HT A+ S G +  WG G              G+LG+G       P  V+ 
Sbjct: 981  DAIGLAAGRLHTCAVHSTGAVSCWGSG------------LDGRLGNGATTSATIPIPVSG 1028

Query: 400  FGENVKALQVSCGFNHTGAL 419
             G+   ALQVS G +HT A+
Sbjct: 1029 LGD---ALQVSAGTSHTCAI 1045



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 154/366 (42%), Gaps = 27/366 (7%)

Query: 7    TAMTKYYLKQDIKLGSKLGICKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVV 64
            +A T       + LG  + I   +  +   RR   +  WG G++GRLG GS   R  P  
Sbjct: 766  SAATALLPAPVVNLGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRLGNGSGADRTTPT- 824

Query: 65   CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
                       +  G AHT  L ++G V   G   +G+LG       +  P+ +SGL  +
Sbjct: 825  -PVLNLTDAAHITAGTAHTCALLQSGQVRCWGEGAYGRLGNGSQDDRNT-PVAVSGLT-D 881

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
             V IS G  H+ A+  +G++  WG  + G+LG G    +  P+      L        A 
Sbjct: 882  AVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQTAPVTV----LDIADAVAVAA 937

Query: 185  GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA- 243
            G E + A+   G V  WG GGSGRLG+   +S    LR  +         + G+   I  
Sbjct: 938  GGEHTCALRASGAVSCWGGGGSGRLGN---ASTANSLRPVA---------VTGLSDAIGL 985

Query: 244  AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
            AAG LH+  +   G V  +G     ++       A  P  +S L  + +V  G  HTC +
Sbjct: 986  AAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATIPIPVSGLGDALQVSAGTSHTCAI 1045

Query: 304  TSGGELYTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAISE-G 359
            T+ G  + WG   +G LG GS+    +P     V      S   + S G  HT  +   G
Sbjct: 1046 TAPGGAFCWGLGTSGELGDGSMATALTPVPVANVADAVMISAGRRNSVGASHTVVLRRTG 1105

Query: 360  KILTWG 365
             +  WG
Sbjct: 1106 SVAAWG 1111



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/305 (26%), Positives = 129/305 (42%), Gaps = 28/305 (9%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKA--------LACGGAHTLFLTETG 90
           A  WG G++G+LG GS  S + PV V +  +  +++A        L     HT  L   G
Sbjct: 640 AVCWGRGNHGQLGNGSTSSVYTPVEVPNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNG 699

Query: 91  CVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGK 149
            V   G    GQLG      +S     +  L   +   ++ G  H+ A+   GE+  WG 
Sbjct: 700 TVRCWGYGVDGQLGYGA---FSSSEAGVDVLDLSDARAVAAGMSHTCAMRSTGEIRCWGA 756

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
             +GQ+G G  A  ++P P     ++     + A G+  + A+   G+V  WG G  GRL
Sbjct: 757 ADSGQIGNGSAATALLPAPV----VNLGDAVEIAAGYAHTCALRRNGQVECWGEGEFGRL 812

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           G+G  +            TP  +  L         AG  H+  + ++G+V  +G+ A  +
Sbjct: 813 GNGSGA---------DRTTPTPVLNL--TDAAHITAGTAHTCALLQSGQVRCWGEGAYGR 861

Query: 270 MLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +     +    P  +S L  +  +  G  HTC +   G++  WG    G LG GS     
Sbjct: 862 LGNGSQDDRNTPVAVSGLTDAVAISAGDAHTCAVRQNGQVSCWGYAALGRLGNGSTTDQT 921

Query: 330 SPERV 334
           +P  V
Sbjct: 922 APVTV 926



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 126/297 (42%), Gaps = 38/297 (12%)

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK--AAKVIPIPTKVECLS 175
           + G   E   IS    ++ A+ V G++  WG N NG+LG G      +  P+    + ++
Sbjct: 415 VEGGACEKDPISANQRNTCAV-VGGKVDCWGNNENGELGDGTTMTTGRATPVSNLNDAVA 473

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                   +G   + A+   G V+ WG+G +GRLG+G          +    TP  +  L
Sbjct: 474 ------VGVGRFHACALRATGAVVCWGSGANGRLGNGS---------TAGRTTPTPVSGL 518

Query: 236 -EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            + V +    AG  H+  +   G V  +G+    ++       A  P  +S L  + +V 
Sbjct: 519 SDAVALD---AGESHTCALRATGAVVCWGEGQWGRLGNGSTADATTPVTVSNLTDAVDVD 575

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            GG HTC L + G +  WG   NG LG G      +P  V   F  +    +S GW H+ 
Sbjct: 576 AGGGHTCALRATGAVVCWGRGTNGQLGNGISGDQSAPVTV---FGLNDAISISAGWGHSC 632

Query: 355 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           A+ + G  + WG  G+H           GQLG+G+      P  V    +  A++ S
Sbjct: 633 ALRATGGAVCWGR-GNH-----------GQLGNGSTSSVYTPVEVPNLSDAVAIEAS 677



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 144/373 (38%), Gaps = 70/373 (18%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           G N+ G+LG    +  +     +S L  + V +  G  H+ A+   G +  WG  +NG+L
Sbjct: 444 GNNENGELGDGTTM-TTGRATPVSNLN-DAVAVGVGRFHACALRATGAVVCWGSGANGRL 501

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G  A +  P P  V  LS      A  G   + A+   G V+ WG G  GRLG+G   
Sbjct: 502 GNGSTAGRTTPTP--VSGLSDAVALDA--GESHTCALRATGAVVCWGEGQWGRLGNGS-- 555

Query: 216 SILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  +    TP  +  L + V V    AG  H+  +   G V  +G     ++    
Sbjct: 556 -------TADATTPVTVSNLTDAVDVD---AGGGHTCALRATGAVVCWGRGTNGQLGNGI 605

Query: 275 GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
                 P  +  L  +  +  G  H+C L + G    WG   +G LG GS   +++P  V
Sbjct: 606 SGDQSAPVTVFGLNDAISISAGWGHSCALRATGGAVCWGRGNHGQLGNGSTSSVYTPVEV 665

Query: 335 QGPFSESPVD--------QVSCGWKHTAAI-SEGKILTWGWGGS----HGTFSED----- 376
                   ++         +   + HT A+   G +  WG+G      +G FS       
Sbjct: 666 PNLSDAVAIEASNFTNYGNLDTTFGHTCALRRNGTVRCWGYGVDGQLGYGAFSSSEAGVD 725

Query: 377 -----------------------------GHSSGGQLGHGNDVDYIHPT-IVNFGENVKA 406
                                        G +  GQ+G+G+    + P  +VN G+   A
Sbjct: 726 VLDLSDARAVAAGMSHTCAMRSTGEIRCWGAADSGQIGNGSAATALLPAPVVNLGD---A 782

Query: 407 LQVSCGFNHTGAL 419
           ++++ G+ HT AL
Sbjct: 783 VEIAAGYAHTCAL 795



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 6/160 (3%)

Query: 55   SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            S  +  RPV  +         LA G  HT  +  TG V   G    G+LG       ++ 
Sbjct: 966  STANSLRPVAVTGLSD--AIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATI- 1022

Query: 115  PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECL 174
            P+ +SGL  + +Q+S G  H+ AIT  G  + WG  ++G+LG G  A  + P+P      
Sbjct: 1023 PIPVSGLG-DALQVSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATALTPVPVANVAD 1081

Query: 175  SGIFT--KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
            + + +  ++ ++G   +V +   G V +WGA G GRLG+G
Sbjct: 1082 AVMISAGRRNSVGASHTVVLRRTGSVAAWGAVGVGRLGNG 1121



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 118/343 (34%), Gaps = 113/343 (32%)

Query: 35   LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
            LQ      WG G YGRLG GS + R  PV  S        A++ G AHT  + + G V  
Sbjct: 846  LQSGQVRCWGEGAYGRLGNGSQDDRNTPVAVSGLTD--AVAISAGDAHTCAVRQNGQVSC 903

Query: 95   TGLNDFGQLG-------------------------------------------------I 105
             G    G+LG                                                  
Sbjct: 904  WGYAALGRLGNGSTTDQTAPVTVLDIADAVAVAAGGEHTCALRASGAVSCWGGGGSGRLG 963

Query: 106  SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
            + +   SL P+ ++GL  + + ++ G  H+ A+   G +  WG   +G+LG G   +  I
Sbjct: 964  NASTANSLRPVAVTGLS-DAIGLAAGRLHTCAVHSTGAVSCWGSGLDGRLGNGATTSATI 1022

Query: 166  PIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            PIP     +SG+    Q + G   + A+T  G    WG G SG LG G  ++ L      
Sbjct: 1023 PIP-----VSGLGDALQVSAGTSHTCAITAPGGAFCWGLGTSGELGDGSMATAL------ 1071

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
               TP  +  +                                D ++   G   RR S+ 
Sbjct: 1072 ---TPVPVANV-------------------------------ADAVMISAG---RRNSV- 1093

Query: 285  SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                       G  HT VL   G +  WG+   G LG GS  V
Sbjct: 1094 -----------GASHTVVLRRTGSVAAWGAVGVGRLGNGSPKV 1125


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 26/304 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            G  + +G  +  ++     N    + +P  I  L       + CG  HT VL   G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
           T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 366 WGGS 369
            G S
Sbjct: 314 HGPS 317



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249

Query: 355 A-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
             I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG           +S GQL   G    V    P  +   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L++
Sbjct: 244 GDEHTAVLIQ 253



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126

Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 397
              + QVSCG  H+ A+S + ++ +W            G +S GQLG G +V     P  
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V   E +   QV+ G  H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 26/304 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            G  + +G  +  ++     N    + +P  I  L       + CG  HT VL   G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
           T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 366 WGGS 369
            G S
Sbjct: 314 HGPS 317



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249

Query: 355 A-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
             I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ + +     P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  +  L  +     + G E +  +   GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG           +S GQL   G    V    P  +   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L++
Sbjct: 244 GDEHTAVLIQ 253



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG  + S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   V+ IS G  H++ +  DG+++ +G NS+GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126

Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 397
              + QVSCG  H+ A+S + ++ +W            G +S GQLG G +V     P  
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V   E +   QV+ G  H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2956 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3015

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3016 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3074

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3075 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3126 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3185

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3186 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3232

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3233 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3269



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3952 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4009

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4010 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4067

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4068 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4122

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4123 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4177 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4236

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4237 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4283

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4284 IQRPRLVAALQGKKVNRVACGSAHTLA 4310



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2994 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3053

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3054 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3111

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3112 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3162

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3163 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3222

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3223 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3277

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3278 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3012 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3071

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3072 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3130

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3131 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3184

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3185 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3239

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3240 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3299

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3300 G-LEGQKITRVACGSSHSVA 3318



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4018 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4076

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4077 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4134

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4135 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4185

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4186 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4245

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4246 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4304

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4305 SAHTLAWSTSKPASAG 4320



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3066 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3125

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3126 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3183

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3184 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3240

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3241 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3289

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3290 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3321



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3005

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3057

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3058 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3117

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3118 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3173

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3174 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3215



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3947 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4005

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4006 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4065

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4066 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4116

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4117 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4176

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4177 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4223

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4224 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4255



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 138/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P 
Sbjct: 221 PVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVISFG 313



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 142/304 (46%), Gaps = 26/304 (8%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHS 135
           A G  H+L L     V + G N  GQLG        L P  I  L+   V  +S G  HS
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGEL-PEPIQALETLNVDLVSCGKEHS 87

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++  
Sbjct: 88  LAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKD 146

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  +  
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALSL 198

Query: 256 NGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELY 310
            G  + +G  +  ++     N    + +P  I  L       + CG  HT VL   G+++
Sbjct: 199 CGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQDGKVF 258

Query: 311 TWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
           T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++G
Sbjct: 259 TFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVISFG 313

Query: 366 WGGS 369
            G S
Sbjct: 314 HGPS 317



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRRAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++ L +E      P  +  L   P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSIGALKNLGVIYISCGDEHTA 249

Query: 355 A-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
             I +GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLIQDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
           QAA G   S+ +    +VLS G    G+LG           R+     P  I+ LE + V
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRR---------RAPRGELPEPIQALETLNV 77

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSE--EVVC 295
            + + G  HS  +   GRV+ +G  +  ++    F+E +    P  I+ L   +  +V C
Sbjct: 78  DLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFT--PKKITTLNGIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G  +    SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG           +S GQL   G    V    P  +   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGS----------NSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L++
Sbjct: 244 GDEHTAVLIQ 253



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            + E   R  +   G ++  AA+G  HS  +  N RV   GD +  ++  +       P 
Sbjct: 8   DSRELQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPE 67

Query: 283 LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFS 339
            I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +
Sbjct: 68  PIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LN 126

Query: 340 ESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTI 397
              + QVSCG  H+ A+S + ++ +W            G +S GQLG G +V     P  
Sbjct: 127 GIKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEVPSQASPQR 174

Query: 398 VNFGENVKALQVSCGFNHTGAL 419
           V   E +   QV+ G  H+ AL
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFAL 196


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3179

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 135/295 (45%), Gaps = 38/295 (12%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKV + G   +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGGR-HATALTV 3064

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
            +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG
Sbjct: 3065 DGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWG 3124

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSH 370
              E G LG G       P+ V+       V QV+CG +     A   EG + +WG     
Sbjct: 3125 LGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG----D 3179

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
            G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 GDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
          Length = 620

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 172/346 (49%), Gaps = 31/346 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K+DI +    G     I++   + F  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 73  SKFWFKRDIPISLSCGDEHTAITTGNNKLF--MFGSNNWGQLGLGSKATVNKPTCIKALK 130

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI---SENIGYSLEPLRISGLKKEVV 126
              +K +ACG  HTL LT  G VYATG N+ GQLG+    E   + L     S  K  + 
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHK--IK 188

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK--QAAL 184
           Q+S G + S+A+T +GELY +G+  +G+LGL  K      +P   + + GI  K  Q A 
Sbjct: 189 QLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVP---QLVPGISEKVIQVAC 245

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   +V +T    V ++G G  G+LG G       F   TSE  P++I+ ++  K+    
Sbjct: 246 GGGHTVVLTEKA-VYTFGLGQFGQLGLGT------FTFETSE--PKVIESVKDKKISHVC 296

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISK-LPYSEEVV-CGGYHT 300
            G  H+A I E+G +Y FGD    K+     N   +  P+L S  L Y   +V CGG H 
Sbjct: 297 CGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYIVHLVACGGCHM 356

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
            V  +       G  E+  +    I+  + P  +  P S+ P++ V
Sbjct: 357 LVFATP----RLGMAED--IESDEINYSYLPSAIYVPISDPPLENV 396



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 40/314 (12%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
           E+ +  +    G     + ++G V+      FG+   +EN+     P +    +   + +
Sbjct: 36  EEQAFHSAITMGEPDKMVPDSGAVFT-----FGKTKFAENM-----PSKFWFKRDIPISL 85

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  H++  T + +L+M+G N+ GQLGLG KA   +  PT ++ L     K  A G   
Sbjct: 86  SCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKA--TVNKPTCIKALKPEKVKFVACGRNH 143

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIA 243
           ++ +TGGG+V + G    G+LG G         ++ F   TS++           K+K  
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFF--TSQH-----------KIKQL 190

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSEEVV---CGG 297
           +AG   SA +   G +Y FG+    K+        NH + P L+  +  SE+V+   CGG
Sbjct: 191 SAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNH-KVPQLVPGI--SEKVIQVACGG 247

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            HT VLT    +YT+G  + G LG+G+     S  +V     +  +  V CG  HTA I+
Sbjct: 248 GHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALIT 306

Query: 358 EGKILTWGWGGSHG 371
           E  +L     G HG
Sbjct: 307 ESGLLYTFGDGRHG 320



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 140/328 (42%), Gaps = 54/328 (16%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK-KAAKVIP- 166
           + + L P R+     + +     +H  SAIT+ GE      +S      GK K A+ +P 
Sbjct: 19  LRHCLRPSRVDA--ADFLAEEQAFH--SAITM-GEPDKMVPDSGAVFTFGKTKFAENMPS 73

Query: 167 -------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                  IP  + C           G E +   TG  K+  +G+   G+LG G ++++  
Sbjct: 74  KFWFKRDIPISLSC-----------GDEHTAITTGNNKLFMFGSNNWGQLGLGSKATV-- 120

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                    P  IK L+  KVK  A G  H+  +   G+VY  G     ++   + +   
Sbjct: 121 -------NKPTCIKALKPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERS 173

Query: 280 RPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHS-PERV 334
              LIS        +++  G   +  LT+ GELYT+G  E+G LG+   + V H  P+ V
Sbjct: 174 AFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLV 233

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN-DVDYI 393
            G  SE  V QV+CG  HT  ++E  + T+G G              GQLG G    +  
Sbjct: 234 PG-ISEK-VIQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFTFETS 279

Query: 394 HPTIVNFGENVKALQVSCGFNHTGALLE 421
            P ++   ++ K   V CG NHT  + E
Sbjct: 280 EPKVIESVKDKKISHVCCGENHTALITE 307


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 246

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 247 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 293

Query: 417 GALLEYV 423
             L E V
Sbjct: 294 VVLTEKV 300



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 34/192 (17%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++       V   +CG  
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGRN 135

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQV 409
           HT       +++   GG +      G ++ GQLG G  +D D  H  IV F       Q+
Sbjct: 136 HT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTPADTIKQL 183

Query: 410 SCGFNHTGALLE 421
           S G N + AL E
Sbjct: 184 SAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2954 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3013

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3014 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3072

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3073 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3124 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3183

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3184 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3230

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3231 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3267



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 17/263 (6%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG  + G+LG G+     RP V  +     +  +A GGAH+  +T  G +Y  G   +G+
Sbjct: 4005 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGR 4064

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG S++    L+P  +  L+   VV I+  +G   +  +T D  ++ WG    G+LG G 
Sbjct: 4065 LGHSDSED-QLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG- 4122

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    +P K++ L+G+   +   G + SVA+T  G V +WG G   RLGHG +  +  
Sbjct: 4123 -GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV-- 4179

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     PR ++ L+G KV   A G LH  C  E+G VY +GD    ++     N  +
Sbjct: 4180 -------RRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQ 4232

Query: 280  RPSLISKL--PYSEEVVCGGYHT 300
            RP L++ L       V CG  HT
Sbjct: 4233 RPRLVAALQGKKVNRVACGSAHT 4255



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2992 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3051

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3052 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3109

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3110 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3160

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3161 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3220

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3221 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3275

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3276 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3010 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3069

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3070 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3128

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3129 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3182

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3183 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3237

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3238 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3297

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3298 G-LEGQKITRVACGSSHSVA 3316



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3064 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3123

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3124 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3181

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3182 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3238

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3239 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3287

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3288 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3319



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 143/311 (45%), Gaps = 31/311 (9%)

Query: 113  LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
            LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG G ++      P  +E
Sbjct: 3973 LESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIE 4028

Query: 173  CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
             L GI     A G   S  VT  G + +WG G  GRLGH           S  +  P+L+
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---------SEDQLKPKLV 4079

Query: 233  KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY- 289
            + L+G +V   A  +G   + C+ ++  V+ +GD    K+     +  + P  I  L   
Sbjct: 4080 EALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGL 4139

Query: 290  -SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
               +V CG   +  LT  G +YTWG  +   LG GS D +  P +VQG      V  ++ 
Sbjct: 4140 GVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQG-LQGKKVIAIAT 4198

Query: 349  GWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
            G  H    +E G++ TW            G +  GQLG G       P +V   +  K  
Sbjct: 4199 GSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAIQRPRLVAALQGKKVN 4246

Query: 408  QVSCGFNHTGA 418
            +V+CG  HT A
Sbjct: 4247 RVACGSAHTLA 4257



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3003

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3055

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3056 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3115

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3116 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3171

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3172 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3213



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 2/96 (2%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GDY RLG GS +   RP      +   + A+A G  H +  TE G VY  G ND GQ
Sbjct: 4163 WGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQ 4222

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            LG          P  ++ L+ K+V +++ G  H+ A
Sbjct: 4223 LGDGTTNAIQ-RPRLVAALQGKKVNRVACGSAHTLA 4257


>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
            Shintoku]
          Length = 2619

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 180/394 (45%), Gaps = 63/394 (15%)

Query: 43   WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTET-------GCVYA 94
            WG   +  LG G  + +   P +   F    +  +ACG  H+  L  +       G V+ 
Sbjct: 1018 WGKVPFNCLGQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTVFT 1077

Query: 95   TGLNDFGQLG---------ISENIG-----------YSLEPLRIS-GLKKEVVQISTGYH 133
             GL + G+LG         +S+ IG           ++ +P+ +S GL+  +V I+ G +
Sbjct: 1078 FGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGAN 1137

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+   TVDG +Y WG  + G LG G  A +  P+   V     IF  +   G   S+A+ 
Sbjct: 1138 HTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKV-VFPSDNIFISKCCAGSRHSMALD 1196

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G V SWG GG+GRLG G          + + YTP LI+  +  +V   + G  HSAC+
Sbjct: 1197 KEGNVWSWGYGGNGRLGLGS---------TRNYYTPNLIRIFDTYEVFQISCGDSHSACL 1247

Query: 254  DENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
            D  G VY +G     K+ L +  +    P+++  L   +  ++ CG  +T  L++ G++Y
Sbjct: 1248 DRFGTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIY 1307

Query: 311  TWGS----NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
             WG     N+     I +ID +  P    G F       ++ G    AAI+  G +LTWG
Sbjct: 1308 QWGCTLGFNKQSEGLISNIDYVPQPVPDTG-FKNV---FIAAGPYSCAAINIFGDLLTWG 1363

Query: 366  WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
             G            +G +LGHG+  D++ P  V+
Sbjct: 1364 LG------------TGYRLGHGDSKDHVAPKFVS 1385



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 169/390 (43%), Gaps = 68/390 (17%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G  GRLGLGS  + + P +   F+ + +  ++CG +H+  L   G VY  G    G+
Sbjct: 1204 WGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCGDSHSACLDRFGTVYTWGCCRGGK 1263

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
            LG+ + +   LEP  +  LK   ++QI+ G  ++ A++  G++Y WG      LG  K++
Sbjct: 1264 LGLGKIVSDVLEPAVVESLKGTHIIQIACGTGNTLALSASGKIYQWG----CTLGFNKQS 1319

Query: 162  AKVI------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
              +I      P P        +F    A G     A+   G +L+WG G   RLGHG   
Sbjct: 1320 EGLISNIDYVPQPVPDTGFKNVFI---AAGPYSCAAINIFGDLLTWGLGTGYRLGHGDSK 1376

Query: 216  S-----ILGFLRSTSEYTPRLIK-------ELEG------------VKVKIAAAGFLHSA 251
                   +  LR T  Y   L+K       EL+              +++  A G  H  
Sbjct: 1377 DHVAPKFVSHLR-TRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGV 1435

Query: 252  CIDENGRVYIFG--------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
             +  NG VY +G              +   + MLF   NH    S ISK      + CG 
Sbjct: 1436 LLTCNGTVYTWGVNNGTGYNSTKDQIESYSEPMLF---NHFS--SKISK------IACGS 1484

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             H+  +T  G L+TWG N+NG LG G +     P+ V  P+ E+ ++ V  G  ++  I 
Sbjct: 1485 NHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHV--PYIENCIN-VFAGVDNSGCIC 1541

Query: 358  EGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
                  +     +GT    G SS G+LG G
Sbjct: 1542 SSNHEDF-MKDDYGTLWVFGSSSCGKLGLG 1570



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 156/365 (42%), Gaps = 50/365 (13%)

Query: 56   LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------ISE 107
            +ES   P++ + F    +  +ACG  H+L +T  G ++  G ND GQLG        I +
Sbjct: 1461 IESYSEPMLFNHFSS-KISKIACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPD 1519

Query: 108  NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
            ++ Y    + +         I +  H        G L+++G +S G+LGLG+     +  
Sbjct: 1520 HVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEALTSTVMT 1579

Query: 168  PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            P ++  ++G++  + ALG   SV +T  G + S GAG  GRLG G  S+   F    +E 
Sbjct: 1580 PREITTVTGVY--KLALGTMHSVVLTHEGSLYSAGAGTGGRLGTGDTSNYFVFTPVKTE- 1636

Query: 228  TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
                      VK     AG  HS  I  +  +Y +G+    K +  +  H   P+L+  +
Sbjct: 1637 ----------VKFVDVCAGSSHSLAISVDNELYGWGE---GKYICSDEKHVLEPTLMEVI 1683

Query: 288  PYSE------EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
            P           V  G H+ VLT+ G +  +G+N  G LG+       +   ++ P + +
Sbjct: 1684 PSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYGQLGVQLSIKSSANNFIKMPSTVN 1743

Query: 342  PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGH----SSGGQLGHG---NDVDYIH 394
                V+C            I T  +  S  T   D +    SS  +LG G   N V Y  
Sbjct: 1744 LDANVTC------------IATSRYFSSCSTLKGDAYSWGLSSDDRLGVGFTNNKVVYAP 1791

Query: 395  PTIVN 399
             TIVN
Sbjct: 1792 TTIVN 1796



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 106/253 (41%), Gaps = 51/253 (20%)

Query: 198  VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---- 253
            V SWG      LG G + S       TSEY P++I    G K+   A G  HSA +    
Sbjct: 1015 VYSWGKVPFNCLGQGVDVS-------TSEY-PKIIPFFSGRKIAQVACGDYHSAVLVSSS 1066

Query: 254  ---DENGRVYIFG-----------DRAVDKMLFQEGNHAR-RPSLISKLPYSE------- 291
                  G V+ FG           D   D +  Q G   +  PS  +  P          
Sbjct: 1067 KQHPNAGTVFTFGLGNSGRLGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLR 1126

Query: 292  ----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                 + CG  HT V T  G +Y+WG    G LG GS+   ++P +V  P     + +  
Sbjct: 1127 NAIVSIACGANHTLVTTVDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCC 1186

Query: 348  CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
             G +H+ A+  EG + +WG+GG+            G+LG G+  +Y  P ++   +  + 
Sbjct: 1187 AGSRHSMALDKEGNVWSWGYGGN------------GRLGLGSTRNYYTPNLIRIFDTYEV 1234

Query: 407  LQVSCGFNHTGAL 419
             Q+SCG +H+  L
Sbjct: 1235 FQISCGDSHSACL 1247



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 5/140 (3%)

Query: 43   WGNGDY-GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG G Y        LE     V+ S   +  + +    G H+L LT +G V A G N +G
Sbjct: 1661 WGEGKYICSDEKHVLEPTLMEVIPSPTGEAKVISAVAAGNHSLVLTNSGYVAAFGNNTYG 1720

Query: 102  QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            QLG+  +I  S    ++      L   V  I+T  + SS  T+ G+ Y WG +S+ +LG+
Sbjct: 1721 QLGVQLSIKSSANNFIKMPSTVNLDANVTCIATSRYFSSCSTLKGDAYSWGLSSDDRLGV 1780

Query: 158  GKKAAKVIPIPTKVECLSGI 177
            G    KV+  PT +   S I
Sbjct: 1781 GFTNNKVVYAPTTIVNTSMI 1800


>gi|326444459|ref|ZP_08219193.1| regulator of chromosome condensation, rcc1 [Streptomyces
           clavuligerus ATCC 27064]
          Length = 416

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 44  WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 103

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 104 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 162

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 163 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 220

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
                   L ST    P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 221 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 270

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 271 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 326

Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
           P       S+ P V  ++ G  +  A+++G     GWG    G  G+ + D H+  GQ
Sbjct: 327 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 384



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 49/301 (16%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 34  AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 91

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 92  ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 141

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 142 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 196

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
           +  L  GG L  WG+N+ G LG  +I +   P  V+     SPV +++ G   + A +++
Sbjct: 197 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 254

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G I  WG         E+GH   G+LG+G   + + P  V       A ++  G NH+ A
Sbjct: 255 GTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVAGGNHSYA 302

Query: 419 L 419
           L
Sbjct: 303 L 303


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 168/376 (44%), Gaps = 67/376 (17%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYH 133
           +ACGG H + +T+ G +++ G    G+LG  I  ++        ++G+  E+V  + G +
Sbjct: 303 IACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELV--ACGEN 360

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           H+ A+T  G+LY WG  +   G LG G +A+  IP     + + GI     + G   + A
Sbjct: 361 HTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGD-MEGIHVSYVSCGPWHTAA 419

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ ++G G  G LGHG  SS            PR ++ L G++    + G  H+A
Sbjct: 420 VTSVGQLFTFGDGTFGALGHGDHSSAT---------VPREVETLRGLRTIRVSCGVWHTA 470

Query: 252 CIDE-----------------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
              E                       NG  Y  G    +  LF E   A     I    
Sbjct: 471 AAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENIC--- 527

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG----IGSIDVLHSPERVQGPFSESPVD 344
              +V CG   T  LT+ G +YT GS   G LG     G +     P  V+G  +   ++
Sbjct: 528 ---QVACGHNLTLALTAAGRVYTMGSTSYGQLGNPRATGKV-----PAIVEGKIAGKIIE 579

Query: 345 QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
           +++CG  H A + S+ ++ TWG G            + GQLGHG++ D   PT+V+F  +
Sbjct: 580 EIACGSYHVAVLTSKAEVYTWGKG------------TNGQLGHGDNKDRNQPTVVDFLRD 627

Query: 404 VKALQVSCGFNHTGAL 419
            +   V+CG N T  +
Sbjct: 628 KQVRAVACGSNFTAII 643



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 143/343 (41%), Gaps = 50/343 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +       +++ +ACG  HT  +T +G +Y    G  + 
Sbjct: 322 WGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNC 381

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG      + + P RI G  +   V  +S G  H++A+T  G+L+ +G  + G LG G
Sbjct: 382 GLLGHGSEASHWI-PKRIGGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHG 440

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT---------------GGGKVLSWGA 203
             ++  +P   +VE L G+ T + + G   + A                   GK+ +WG 
Sbjct: 441 DHSSATVP--REVETLRGLRTIRVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGN 498

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           G   RLGHG +   L          P  +  L    +   A G   +  +   GRVY  G
Sbjct: 499 GDEYRLGHGDKEPRL---------FPECVVALGDENICQVACGHNLTLALTAAGRVYTMG 549

Query: 264 DRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWG 313
             +  ++    GN    P    K+P            EE+ CG YH  VLTS  E+YTWG
Sbjct: 550 STSYGQL----GN----PRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEVYTWG 601

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
              NG LG G     + P  V     +  V  V+CG   TA I
Sbjct: 602 KGTNGQLGHGDNKDRNQPTVVDF-LRDKQVRAVACGSNFTAII 643



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 119/274 (43%), Gaps = 43/274 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  +E    +     A G   +V VT  G++ SWG    GRLGHG ++ +         
Sbjct: 288 LPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPN------- 340

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLI 284
             P+LI  L G+ +++ A G  H+  +  +G +Y +GD A +  L   G+ A    P  I
Sbjct: 341 --PKLIDTLAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRI 398

Query: 285 ---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
               +  +   V CG +HT  +TS G+L+T+G    G LG G       P  V+      
Sbjct: 399 GGDMEGIHVSYVSCGPWHTAAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLR 458

Query: 342 PVDQVSCGWKHTAAISE----------------GKILTWGWGGSHGTFSEDGHSSGGQLG 385
            + +VSCG  HTAA  E                GK+ TWG G  +            +LG
Sbjct: 459 TI-RVSCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEY------------RLG 505

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           HG+    + P  V    +    QV+CG N T AL
Sbjct: 506 HGDKEPRLFPECVVALGDENICQVACGHNLTLAL 539



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 93/200 (46%), Gaps = 17/200 (8%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
           + P+ ++    + V   A G  H+  + + G ++ +G+ +  ++          P LI  
Sbjct: 287 FLPKALESKVVLDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDT 346

Query: 287 LP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGC--LGIGSIDVLHSPERVQGPFSESP 342
           L     E V CG  HTC +T  G+LYTWG     C  LG GS      P+R+ G      
Sbjct: 347 LAGMNIELVACGENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIH 406

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  VSCG  HTAA+ S G++ T+G     GTF        G LGHG+      P  V   
Sbjct: 407 VSYVSCGPWHTAAVTSVGQLFTFG----DGTF--------GALGHGDHSSATVPREVETL 454

Query: 402 ENVKALQVSCGFNHTGALLE 421
             ++ ++VSCG  HT A +E
Sbjct: 455 RGLRTIRVSCGVWHTAAAVE 474


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 762  WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 819

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 820  GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 877

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 878  HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 932

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 933  ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 987  SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 1046

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 1047 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 1093

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 1094 IQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 828  ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 886

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 887  PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 944

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 945  LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 995

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 996  IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 1055

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 1056 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 1114

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 1115 SAHTLAWSTSKPASAG 1130



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 757  GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 815

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 816  YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 875

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 876  LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 926

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 927  RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 986

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 987  SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 1033

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 1034 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 1065



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 98/193 (50%), Gaps = 10/193 (5%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+LG  +N    L+P  +  
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNT-TQLKPKMVKV 63

Query: 121 LK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
           L    V+Q++ G   +   A+T +G ++ WG    G+LG G   ++   IP  +E L+G 
Sbjct: 64  LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQ 121

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              Q   G + S+A+T  G V +W     G   HGQ+    G   +T    P L++ LEG
Sbjct: 122 GVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQ----GNGTTTVNRKPTLVQGLEG 177

Query: 238 VKVKIAAAGFLHS 250
            K+   A G  HS
Sbjct: 178 QKITRVACGSSHS 190



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/162 (38%), Positives = 81/162 (50%), Gaps = 17/162 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG G   ++ +P +      H +  +ACG   A TL LT+ G V++ G  DF
Sbjct: 39  WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 98

Query: 101 GQLGI--SE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG-----ELYMWGKNS 151
           G+LG   SE  NI  ++E L   G    V QI  G   S A+T  G     ++Y WG N 
Sbjct: 99  GKLGRGGSEGCNIPQNIERLNGQG----VCQIECGAQFSLALTKSGVVWTWQVYAWGDND 154

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           +GQ G G     V   PT V+ L G    + A G   SVA T
Sbjct: 155 HGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 91/205 (44%), Gaps = 19/205 (9%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG          +T++ 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD---------NTTQL 56

Query: 228 TPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            P+++K L G +V   A G     +  + + G V+ +GD    K+          P  I 
Sbjct: 57  KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE 116

Query: 286 KLPYSE--EVVCGGYHTCVLTSGG-----ELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           +L      ++ CG   +  LT  G     ++Y WG N++G  G G+  V   P  VQG  
Sbjct: 117 RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-L 175

Query: 339 SESPVDQVSCGWKHTAAISEGKILT 363
               + +V+CG  H+ A +   + T
Sbjct: 176 EGQKITRVACGSSHSVAWTTVDVAT 200



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 29/206 (14%)

Query: 114 EPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G    ++ P   KV 
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV- 63

Query: 173 CLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
            L G    Q A G    Q++A+T  G V SWG G  G+LG G          S     P+
Sbjct: 64  -LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---------SEGCNIPQ 113

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENG-----RVYIFGDRAVDKMLFQEGNHA----RRP 281
            I+ L G  V     G   S  + ++G     +VY +GD        Q+GN      R+P
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHG----QQGNGTTTVNRKP 169

Query: 282 SLISKLPYSE--EVVCGGYHTCVLTS 305
           +L+  L   +   V CG  H+   T+
Sbjct: 170 TLVQGLEGQKITRVACGSSHSVAWTT 195



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 19/198 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           PRLI+ L+  +++  A G  HSA +  +G +Y +G     ++   +     +P ++  L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 289 YSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
                +V CG     T  LT  G +++WG  + G LG G  +  + P+ ++   +   V 
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVC 124

Query: 345 QVSCGWKHTAAISE-GKILTW---GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           Q+ CG + + A+++ G + TW    WG       ++ H   GQ G+G       PT+V  
Sbjct: 125 QIECGAQFSLALTKSGVVWTWQVYAWG-------DNDH---GQQGNGTTTVNRKPTLVQG 174

Query: 401 GENVKALQVSCGFNHTGA 418
            E  K  +V+CG +H+ A
Sbjct: 175 LEGQKITRVACGSSHSVA 192



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 60/145 (41%), Gaps = 18/145 (12%)

Query: 280 RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
           +P LI  L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+  
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 338 FSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                V QV+CG +     A   EG + +WG     G F        G+LG G       
Sbjct: 65  LGHR-VIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRGGSEGCNI 111

Query: 395 PTIVNFGENVKALQVSCGFNHTGAL 419
           P  +         Q+ CG   + AL
Sbjct: 112 PQNIERLNGQGVCQIECGAQFSLAL 136


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 136/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDIQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 147/339 (43%), Gaps = 30/339 (8%)

Query: 45  NGDYGRLGLGSLES-------RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVY 93
           NG+ G+    +L S       +W      + E+  L   AC     G   L+ T    ++
Sbjct: 9   NGESGKPIRATLSSLKMLDVGKWPMFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIF 68

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNS 151
             G N  G LG+ + I  ++EP ++  L  K++  +S G   H    T +GE++ WG N+
Sbjct: 69  VLGTNCCGCLGLGD-IQSTIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNA 127

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             QLG G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G 
Sbjct: 128 YSQLGNGTTNHGLVPCHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGS 186

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKM 270
           G          + ++  PR +      KV +  A G + S  + + G V+++G     ++
Sbjct: 187 GS---------TANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGNGQL 237

Query: 271 LFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL 328
                 +   P  I+ L     + V CG  HT VLT  G++Y WG+N  G LG G+    
Sbjct: 238 GLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 297

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
             P  V     +  ++  +C   HT+A     G +  WG
Sbjct: 298 SYPTPVVVE-KDRVIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDIQSTIE--PRKLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      +  ++CG   + A+ + G++  WG+ G+            GQLG G+  + 
Sbjct: 198 VTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNGN------------GQLGLGSSGNQ 245

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + ++  +V+CG+ HT  L +
Sbjct: 246 PTPCRIAALQGIRVQRVACGYAHTLVLTD 274



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  V++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRVIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPYLTHFSCTDDVF 357


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 152/320 (47%), Gaps = 41/320 (12%)

Query: 42  LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 524 VWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 582

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDG----------------E 143
            GQLG+   +  S EP  ++ L+ + + +  G  +S+ IT +G                +
Sbjct: 583 DGQLGLGV-LRPSFEPAAVTALR-QAIDVFCGDDYSACITSNGGAQTVSLALESGTEFGD 640

Query: 144 LYMWGKNSNGQLGLGKKAAK-VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           L+ WG   +G+LGLG+  A   I  P KV     +     +LG   ++A+T  G+  +WG
Sbjct: 641 LWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGTSHALAITARGECYAWG 698

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG  GRLG G          + + Y P      +GV+++  AAG  HS  +  +G ++I+
Sbjct: 699 AGYYGRLGIGT---------TANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIW 749

Query: 263 GDRAVDKMLFQEGNHAR---RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN---E 316
           G +  D       N  R   +    S +P  + +    +H+  +T  GE++ WG N   +
Sbjct: 750 GKKE-DTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQ 808

Query: 317 NGCLGIGSIDVLHSPERVQG 336
            GC G    + L  PE + G
Sbjct: 809 TGC-GKRQAERLDRPEMIAG 827



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 180/439 (41%), Gaps = 86/439 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHS------------------LKALACGGAHT 83
           WG G YG LG G     + PV V    EK S                  +   A G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L ++VV +S G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDVVFVSAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +  LG G++              P+ + ++E V V   AAG  HSA +   G + ++
Sbjct: 382 AGLALGLGEGEDGG------GGMVTVPKHLSDIE-VAVLNVAAGPYHSAAVTVGGDLLVW 434

Query: 263 G-------------DRAVDKMLFQEGNHARRPSLISKL-------PYSEEVV-------- 294
           G             ++   K +    N      L S L        YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGA 494

Query: 295 -------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
                        CG  HT  LT  G ++ WGSN+ G LG+G        E V+     +
Sbjct: 495 GANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST 554

Query: 342 PVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           P+ +++CG KH  A+++ G +  W            G +  GQLG G       P  V  
Sbjct: 555 PIRRIACGSKHCLAVAQYGDVFAW------------GANDDGQLGLGVLRPSFEPAAVTA 602

Query: 401 GENVKALQVSCGFNHTGAL 419
               +A+ V CG +++  +
Sbjct: 603 LR--QAIDVFCGDDYSACI 619



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 185/439 (42%), Gaps = 88/439 (20%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG+G +GRLG G       P     F    +  +ACG  HTL LT  G V+A   GL   
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
              G     G    P  +S ++  V+ ++ G +HS+A+TV G+L +WG   + +LG G +
Sbjct: 388 LGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 161 AAKVIPIPTKVECLSG---IFTKQAALGFEQ----------------------------- 188
             +  P P  V  L     +   Q+ LG  +                             
Sbjct: 448 QNQ--PFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQS 505

Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
                  +VA+TG G V  WG+   G+LG G++           +Y P  + +     ++
Sbjct: 506 LGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQV-------EEDQYEPVKL-DCFSTPIR 557

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
             A G  H   + + G V+ +G     ++       +  P+ ++ L  + +V CG  Y  
Sbjct: 558 RIACGSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSA 617

Query: 301 CVLTSG---------------GELYTWGSNENGCLGIGSIDV----LHSPERVQGPFSES 341
           C+ ++G               G+L+TWG+ E+G LG+G  DV    + +P++V  PFS  
Sbjct: 618 CITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGE-DVASGSILTPQKV--PFS-V 673

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           PV   S G  H  AI+  G+   WG G              G+LG G   +   PT  +F
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAG------------YYGRLGIGTTANAYAPTKCDF 721

Query: 401 GENVKALQVSCGFNHTGAL 419
            + V+   V+ G +H+ AL
Sbjct: 722 PKGVRIRSVAAGASHSLAL 740



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 144/313 (46%), Gaps = 31/313 (9%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQIST 130
           +L++L CG  HT+ LT TG V+  G ND GQLG+ E +     EP+++      + +I+ 
Sbjct: 502 TLQSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIAC 561

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLGK-----KAAKVIPIPTKVECLSGIFTKQ--AA 183
           G  H  A+   G+++ WG N +GQLGLG      + A V  +   ++   G        +
Sbjct: 562 GSKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITS 621

Query: 184 LGFEQSVAV-----TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
            G  Q+V++     T  G + +WGA  SG+LG G++ +      S S  TP+ +     V
Sbjct: 622 NGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVA------SGSILTPQKVP--FSV 673

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL--ISKLPYSEEVVCG 296
            V   + G  H+  I   G  Y +G     ++      +A  P+     K      V  G
Sbjct: 674 PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAG 733

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---RVQGPFSESPVDQVSCGWKHT 353
             H+  L+  G+L+ WG  E+ C    S    +SP    +++ P     V  ++    H+
Sbjct: 734 ASHSLALSMDGDLWIWGKKEDTC----STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHS 789

Query: 354 AAISE-GKILTWG 365
            A++E G++  WG
Sbjct: 790 LAVTETGEVFAWG 802



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 167/427 (39%), Gaps = 90/427 (21%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    +  P+R+  
Sbjct: 171 KPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDT-SDAYSPVRVLL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE + I             + G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +   P  V+ +        + G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSL--SPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEI--- 344

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                   PR ++   GV V   A G  H+  +   G V+ +G      +   E      
Sbjct: 345 ------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398

Query: 281 PSLISKLPYSE----EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE---- 332
            ++   L   E     V  G YH+  +T GG+L  WG   +  LG G       P+    
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVAD 458

Query: 333 -----------------RVQGPFSESPV-----------------DQVSCGWKHTAAISE 358
                            R++  +S+  V                   + CG  HT A++ 
Sbjct: 459 LRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALT- 517

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFNH 415
           G    W WG           +  GQLG G  V  D   P  ++ F   ++  +++CG  H
Sbjct: 518 GTGAVWVWGS----------NDEGQLGLGEQVEEDQYEPVKLDCFSTPIR--RIACGSKH 565

Query: 416 TGALLEY 422
             A+ +Y
Sbjct: 566 CLAVAQY 572



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 144/339 (42%), Gaps = 45/339 (13%)

Query: 72  SLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQ 127
           S+K +A G  HTL +   G    + A G N    LG+       + P  +    +  V +
Sbjct: 47  SVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFE 106

Query: 128 ISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAK------------------- 163
           +S G ++S+ +        G++Y +G  + G+LG  K  A+                   
Sbjct: 107 VSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166

Query: 164 -VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS------ 216
              P P +V         + + G + ++A++ GG + +WG G  G LG G  S       
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVR 226

Query: 217 -ILGFLRSTSEYTPRL---IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
            +LG  + + +    L    +  + V V   AAG  HS     +G ++ +G     ++  
Sbjct: 227 VLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGL 286

Query: 273 QEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
                +  P+++  +    +VV    G  H+  +   G LYTWGS   G LG G    + 
Sbjct: 287 GHNRGSLSPAVVDYI-LDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP 345

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
            P +V+G F   PV QV+CG  HT A++ +G +  WG G
Sbjct: 346 VPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAG 383



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YGRLG+G+  + + P  C   +   ++++A G +H+L L+  G ++  G  +   
Sbjct: 697 WGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTC 756

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
              + N       L       +V  I+   HHS A+T  GE++ WG N   Q G GK+ A
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           + +  P  +  L  +  +  A G + S  V   G+V + G    GRLG G
Sbjct: 817 ERLDRPEMIAGLPNV-CQWVATGPQASFFVLCSGEVYAAGVINGGRLGTG 865


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2961 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 3020

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3021 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3079

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3080 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3191 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3237

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3238 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3274



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3957 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4014

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4015 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4072

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4073 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4127

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4128 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4182 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4241

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4242 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4288

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4289 IQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2999 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 3058

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3059 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3116

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3117 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3167

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3168 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3282

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3283 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3017 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3076

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3077 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3135

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3136 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3189

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3190 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3244

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3245 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3304

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3305 G-LEGQKITRVACGSSHSVA 3323



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4023 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4081

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4082 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4139

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4140 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4190

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4191 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4250

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4251 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4309

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4310 SAHTLAWSTSKPASAG 4325



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 138/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3071 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3130

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3131 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3188

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3189 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3245

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3246 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3294

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3295 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3122

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3178

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3179 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3220



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4070

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4071 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4121

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4122 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4181

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4182 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4228

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4229 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
           WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 228 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 286

Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 287 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 344

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 345 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 398

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 399 -----SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 453

Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 454 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 513

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           VQG      V  ++ G  H    +E G++ TW            G +  GQLG G     
Sbjct: 514 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 560

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGA 418
             P +V   +  K  +V+CG  HT A
Sbjct: 561 QRPRLVAALQGKKVNRVACGSAHTLA 586



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57  ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 294 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 352

Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 353 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 410

Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 411 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 461

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 462 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 521

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 522 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 580

Query: 350 WKHTAAISEGKILTWG 365
             HT A S  K  + G
Sbjct: 581 SAHTLAWSTSKPASAG 596



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 223 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 281

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 282 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 341

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 342 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 392

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 393 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 452

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
            D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 453 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 499

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           LGHG+D     P  V   +  K + ++ G  H
Sbjct: 500 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 531


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 138/292 (47%), Gaps = 20/292 (6%)

Query: 75   ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYH 133
            A+  GG H L L+  G VY+ G  D G+LG     G    P  I  L+ KE+V I+ G  
Sbjct: 4059 AVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCD-HPQLIDALQGKEIVDIACGGA 4117

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVA 191
            HS+A+T  GE+Y WGK   G+LG G    ++ P    VE L G      A G    Q++ 
Sbjct: 4118 HSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKP--KLVETLIGFKVIDIACGSGDAQTLC 4175

Query: 192  VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            +T    V SWG G  G+LG G          S     P  I+ L G+ V     G   S 
Sbjct: 4176 ITDDDNVWSWGDGDYGKLGRGG---------SDGCKIPMKIESLAGLGVVKVECGSQFSV 4226

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGE 308
             +  +G VY +G     ++      H R P  I+ L   ++++C   G  H    +  GE
Sbjct: 4227 ALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAAL-QGKKIICIATGSLHCVACSDLGE 4285

Query: 309  LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
            ++TWG N+ G LG G+++ +H P R+        +++V+CG  H+ A S  K
Sbjct: 4286 VFTWGDNDEGQLGDGTMNAIHRP-RLVVTLQGKNINRVACGSAHSLAWSTNK 4336



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 166/368 (45%), Gaps = 49/368 (13%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE---PLRI 118
           P  C +  +  +K + C     L LT TG VY               + YS E   P +I
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYI--------------MYYSSETQCPEQI 513

Query: 119 SGLK-KEVVQISTGYH--HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS 175
            G   KE+ +++      HS A++ DG++Y WG    G+LG G   ++    PTK+  L 
Sbjct: 514 EGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSR--DQPTKITELV 571

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
           G      + G   S AVT  G+V +WG G  GRLGHG          S     P L+  L
Sbjct: 572 GKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGT---------SEDHTVPTLVVGL 622

Query: 236 EG-VKVKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE-- 291
           +    V IA  +G   +  +   G V+ +GD    K+     + ++ P LI KL   E  
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVA 682

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            V CG   +  LT  G +YTWG  +N  LG GS + +  P+ V+G  +   + +V+ G  
Sbjct: 683 RVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEG-LNGKCIKKVAVGSG 741

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           H  A++ +G++  +GW          G +  GQ+G  ++ +   PT++   +    + + 
Sbjct: 742 HVLALTDDGEV--YGW----------GRNDNGQVGETSETNVSEPTLLTLLQGKNIVDID 789

Query: 411 CGFNHTGA 418
           CG N + A
Sbjct: 790 CGPNQSIA 797



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 134/272 (49%), Gaps = 23/272 (8%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG  +  S  RP +  A +   ++ +ACG +H+  ++ TG ++  GL ++G+
Sbjct: 3096 WGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGR 3155

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGKK 160
            LG  +N+      L  + L   +VQ++ G   +   A++ +G ++ WG    G+LG G  
Sbjct: 3156 LGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRG-- 3213

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             ++   IP  +E L+G+       G + S+A+T  G+V +WG G   RLGHG +  +   
Sbjct: 3214 GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHV--- 3270

Query: 221  LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA-- 278
                    P L++ L   K+   A G LH  C  + G+VY +GD        Q+GN    
Sbjct: 3271 ------RKPTLVESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHG----QQGNGTIL 3320

Query: 279  --RRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
              R+PSL+  L       V CG  H+   T+ 
Sbjct: 3321 VNRKPSLVLNLEGVRVNRVACGSSHSIAWTTS 3352



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 186/399 (46%), Gaps = 61/399 (15%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA----CGGAHTLFLTE-TGCVYATG 96
            +WG  D  +LG G   S+ +  V S     SL AL      GG+ +LF+    G +YA G
Sbjct: 2989 VWGLNDKDQLG-GLKGSKVKVPVYS----ESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043

Query: 97   LNDFGQLGI--SENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNS 151
                G+LG+  S N+     P +++ L + V++   + +G  H+ A+T+DG+++ WG+  
Sbjct: 3044 EGTNGRLGLGHSNNVA---TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGE 3100

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+LG   + +  +  P  +E L     +  A G   S A++  G++ +WG G  GRLGH
Sbjct: 3101 DGKLGHDNRLS--LDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGH 3158

Query: 212  GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDK 269
            G          + ++  P+L+K L G  +   A G     +  +   G V+ +GD    K
Sbjct: 3159 GD---------NLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGK 3209

Query: 270  MLFQEGNHARRPSLISKLPYSEE---------VVCGGYHTCVLTSGGELYTWGSNENGCL 320
            +        R  S    +P++ E         + CG   +  LT  G++YTWG  +   L
Sbjct: 3210 L-------GRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGDYFRL 3262

Query: 321  GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHS 379
            G GS   +  P  V+   SE  +  V+ G  H   A  +G++  WG         ++ H 
Sbjct: 3263 GHGSDQHVRKPTLVES-LSEKKIVHVAVGALHCLCATDQGQVYAWG---------DNDH- 3311

Query: 380  SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
              GQ G+G  +    P++V   E V+  +V+CG +H+ A
Sbjct: 3312 --GQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+   G+LG         P  C A        L  G    L +T  G VYATG    G+
Sbjct: 3973 WGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGYGAGGR 4032

Query: 103  LGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            LG+           LE ++   +KK  V +++G  H  A++ DG++Y WG+  +G+LG G
Sbjct: 4033 LGLGGTDTILTPTLLESIQHIFIKK--VAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHG 4090

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             K       P  ++ L G      A G   S AVT GG++ +WG G  GRLGHG      
Sbjct: 4091 NKNG--CDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGD----- 4143

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  +  P+L++ L G KV   A  +G   + CI ++  V+ +GD    K+     +
Sbjct: 4144 ----SEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD 4199

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS + +  P+++
Sbjct: 4200 GCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKI 4259

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
                    +  ++ G  H  A S+ G++ TW            G +  GQLG G  ++ I
Sbjct: 4260 AA-LQGKKIICIATGSLHCVACSDLGEVFTW------------GDNDEGQLGDGT-MNAI 4305

Query: 394  H-PTIVNFGENVKALQVSCGFNHTGA 418
            H P +V   +     +V+CG  H+ A
Sbjct: 4306 HRPRLVVTLQGKNINRVACGSAHSLA 4331



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 152/341 (44%), Gaps = 39/341 (11%)

Query: 89   TGCVYATGLNDFGQLGISE----NIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            +G +Y  G N  GQLG  E     I  S E L  S L+   VQ+  G     A+T DG++
Sbjct: 3967 SGTIYGWGHNHRGQLGGVEGPKVKIPTSCEAL--SALRP--VQLVGGEQTLLAVTSDGKV 4022

Query: 145  YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWG 202
            Y           LG      I  PT +E +  IF K+ A+  G +  +A++  GKV SWG
Sbjct: 4023 Y--ATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWG 4080

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
             G  G+LGHG ++             P+LI  L+G ++   A G  HSA +   G +Y +
Sbjct: 4081 EGDDGKLGHGNKNGC---------DHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTW 4131

Query: 263  GDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENG 318
            G     ++   +     +P L+  L   +  ++ CG     T  +T    +++WG  + G
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACGSGDAQTLCITDDDNVWSWGDGDYG 4191

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
             LG G  D    P +++   +   V +V CG + + A++  G + TWG G  H       
Sbjct: 4192 KLGRGGSDGCKIPMKIES-LAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYH------- 4243

Query: 378  HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 +LGHG+D    HP  +   +  K + ++ G  H  A
Sbjct: 4244 -----RLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVA 4279



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 115/228 (50%), Gaps = 23/228 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNGD GRLG G   SR +P   +     ++  ++CG  ++  +T +G VY  G  ++G+
Sbjct: 545 WGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGR 604

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGL-- 157
           LG   +  +++ P  + GLK   +V I+  +G   + A+T  G ++ WG    G+LG   
Sbjct: 605 LGHGTSEDHTV-PTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGG 663

Query: 158 --GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
             G K  K+I      E L  I   +   G + S+A+T  G V +WG G + RLGHG E+
Sbjct: 664 SDGSKTPKLI------EKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSEN 717

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+L++ L G  +K  A G  H   + ++G VY +G
Sbjct: 718 HV---------RFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWG 756



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 132/284 (46%), Gaps = 29/284 (10%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            G +Y WG N  GQLG G +  KV  IPT  E LS +   Q   G +  +AVT  GKV + 
Sbjct: 3968 GTIYGWGHNHRGQLG-GVEGPKV-KIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYAT 4025

Query: 202  GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
            G G  GRLG G   +IL         TP L++ ++ + +K  A  +G  H   +  +G+V
Sbjct: 4026 GYGAGGRLGLGGTDTIL---------TPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKV 4076

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            Y +G+    K+     N    P LI  L   E  ++ CGG H+  +T+GGE+YTWG    
Sbjct: 4077 YSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRY 4136

Query: 318  GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSE 375
            G LG G  +    P+ V+       +D ++CG     T  I++   + W WG        
Sbjct: 4137 GRLGHGDSEDQMKPKLVETLIGFKVID-IACGSGDAQTLCITDDDNV-WSWG-------- 4186

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            DG    G+LG G       P  +     +  ++V CG   + AL
Sbjct: 4187 DGDY--GKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL 4228



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 125/267 (46%), Gaps = 26/267 (9%)

Query: 115  PLRISGLK---KEVVQISTGYHHSSAITV----DGELYMWGKNSNGQLGLGKKAAKVIPI 167
            PL +S L    +E+ ++ T    SS   +      ++++WG N   QLG G K +KV  +
Sbjct: 2951 PLNVSFLATDYEEIPEVKTLSETSSHSKLWSDSPTKVFVWGLNDKDQLG-GLKGSKV-KV 3008

Query: 168  PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            P   E L+ +     A G +    V+  GK+ + G G +GRLG G  +++          
Sbjct: 3009 PVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNV---------A 3059

Query: 228  TPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            TP  +  L    +K  A  +G  H+  +  +G+V+ +G+    K+         RP +I 
Sbjct: 3060 TPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIE 3119

Query: 286  KLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPV 343
             L      ++ CG  H+  ++S GEL+TWG  E G LG G       P+ V+       V
Sbjct: 3120 ALKSKRIRDIACGSSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIV 3179

Query: 344  DQVSCGWK--HTAAIS-EGKILTWGWG 367
             QV+CG +   T A+S EG + +WG G
Sbjct: 3180 -QVACGSRDAQTLALSAEGLVFSWGDG 3205



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 29/241 (12%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           + S+A++  G V SWG G  GRLGHG          + S   P  I EL G  V   + G
Sbjct: 531 KHSLALSCDGDVYSWGNGDGGRLGHGD---------NNSRDQPTKITELVGKNVIHISCG 581

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCV 302
             +SA +  +G VY +G     ++          P+L+  L   +  ++ CG     T  
Sbjct: 582 ATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLA 641

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
           +T+ G +++WG    G LG G  D   +P+ ++    +  V +V CG + + A+++ G +
Sbjct: 642 VTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEK-LQDIEVARVYCGSQFSLALTKSGSV 700

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTGALL 420
            TWG G +H            +LGHG++     P +V  G N K + +V+ G  H  AL 
Sbjct: 701 YTWGKGDNH------------RLGHGSENHVRFPKLVE-GLNGKCIKKVAVGSGHVLALT 747

Query: 421 E 421
           +
Sbjct: 748 D 748



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 2/96 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD  RLG GS      P +        +K +A G  H L LT+ G VY  G ND GQ
Sbjct: 703 WGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTDDGEVYGWGRNDNGQ 762

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
           +G +     S EP  ++ L+ K +V I  G + S A
Sbjct: 763 VGETSETNVS-EPTLLTLLQGKNIVDIDCGPNQSIA 797



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 105/229 (45%), Gaps = 28/229 (12%)

Query: 197  KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC-IDE 255
            K+ S    G  RL + +    + FL +  E  P         +VK  +    HS    D 
Sbjct: 2933 KIHSLLITGKKRLVNDELPLNVSFLATDYEEIP---------EVKTLSETSSHSKLWSDS 2983

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTCVLTS-GGELYTWG 313
              +V+++G    D++   +G+  + P     L   + + + GG  +  + S  G+LY  G
Sbjct: 2984 PTKVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYDGKLYACG 3043

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS-EGKILTWGWGGSH 370
               NG LG+G  + + +P ++    ++  + +V+   G KH  A++ +GK+ +WG G   
Sbjct: 3044 EGTNGRLGLGHSNNVATPCQLTS-LNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEG--- 3099

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                EDG     +LGH N +    P ++   ++ +   ++CG +H+ A+
Sbjct: 3100 ----EDG-----KLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAI 3139



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 18/203 (8%)

Query: 223 STSEYTPRLIKELEGVKV-KIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
           S+    P  I+  +G ++ K+AA A   HS  +  +G VY +G+    ++   + N   +
Sbjct: 504 SSETQCPEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQ 563

Query: 281 PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
           P+ I++L       + CG  ++  +TS GE+YTWG    G LG G+ +    P  V G  
Sbjct: 564 PTKITELVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLK 623

Query: 339 SESPVDQVSCGW--KHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               VD ++CG     T A++    L + WG         G S G +           P 
Sbjct: 624 DYFIVD-IACGSGDAQTLAVTNTG-LVFSWGDGGYGKLGTGGSDGSKT----------PK 671

Query: 397 IVNFGENVKALQVSCGFNHTGAL 419
           ++   ++++  +V CG   + AL
Sbjct: 672 LIEKLQDIEVARVYCGSQFSLAL 694



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 32/135 (23%)

Query: 291 EEVVCGGYHTCVLTSGGELY-TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC- 348
           +++VC      +LT  G++Y  + S+E  C           PE+++G F    + +++  
Sbjct: 480 KQIVCAERWLLILTLTGKVYIMYYSSETQC-----------PEQIEG-FDGKEISKLAAH 527

Query: 349 -GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN--FGENV 404
              KH+ A+S +G + +WG G             GG+LGHG++     PT +    G+NV
Sbjct: 528 ADGKHSLALSCDGDVYSWGNG------------DGGRLGHGDNNSRDQPTKITELVGKNV 575

Query: 405 KALQVSCGFNHTGAL 419
             + +SCG  ++ A+
Sbjct: 576 --IHISCGATYSAAV 588



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+ D G+LG G++ +  RP +    +  ++  +ACG AH+L  +      AT       
Sbjct: 4289 WGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTSAT------H 4342

Query: 103  LGISENIGYSL-EPLRISGLKKEVVQISTGYHHSSAITVDGELY-MWGKNSNGQL 155
            L +   + Y L   + +  L+  +V +   +H S  ++ +  ++ M G+ S  QL
Sbjct: 4343 LPVDAPMEYDLVRDISLPTLRNRLVLL---HHFSELVSPNVAMFPMEGEGSLDQL 4394


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 30/333 (9%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
           GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +NG+L
Sbjct: 3   GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRL 62

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           GLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV  WG G  G+LGH  
Sbjct: 63  GLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGH-- 119

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                 F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     ++   
Sbjct: 120 ------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 172

Query: 274 EGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
           +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  +  +
Sbjct: 173 DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 232

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P+ ++   +   V Q+ CG + + A+++ G + TWG G               +LGHG+
Sbjct: 233 IPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RLGHGS 279

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           DV    P +V      K + V+ G  H  A+ +
Sbjct: 280 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 312



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 119/225 (52%), Gaps = 15/225 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 109 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 168

Query: 103 LGISENIGYSLEPLRISG-LKKEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
           LG  +N    L+P  +   L   V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 169 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 226

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 227 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 283

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
                    P++++ L G K+   A G LH   + ++G+VY +GD
Sbjct: 284 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGD 321



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 145/296 (48%), Gaps = 21/296 (7%)

Query: 79  GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
           GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 37  GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 96

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 97  ATALTVDGKVFWWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 154

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
            G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 155 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 205

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 206 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 265

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           TWG  +   LG GS   +  P+ V+G   +  V  V+ G  H  A+++ G++  WG
Sbjct: 266 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV-HVAVGALHCLAVTDSGQVYAWG 320



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 129/283 (45%), Gaps = 20/283 (7%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
           G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V+  G  D 
Sbjct: 55  GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDD 114

Query: 101 GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 115 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 173

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
              ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 174 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 227

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 228 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 282

Query: 278 ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            R+P ++  L   +   V  G  H   +T  G++Y WG N++G
Sbjct: 283 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG 325



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 26/281 (9%)

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           +WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  GKV + G   
Sbjct: 1   VWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 58

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           +GRLG G  S  +   R  +  +  ++K     KV + + G  H+  +  +G+V+ +G+ 
Sbjct: 59  NGRLGLGISSGTVPIPRQITALSSYVVK-----KVAVHSGG-RHATALTVDGKVFWWGEG 112

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
              K+      +  +P LI  L      ++ CG  H+  LTS GELYTWG  E G LG G
Sbjct: 113 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG 172

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSS 380
                  P+ V+       + QV+CG +     A   EG + +WG     G F       
Sbjct: 173 DNTTQLKPKMVKVLLGHRVI-QVACGSRDAQTLALTDEGLVFSWG----DGDF------- 220

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G+LG G       P  +         Q+ CG   + AL +
Sbjct: 221 -GKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 260



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 63/115 (54%), Gaps = 2/115 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD+G+LG G  E    P          +  + CG   +L LT++G V+  G  D+ +
Sbjct: 215 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 274

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LG   ++ +  +P  + GL+ K++V ++ G  H  A+T  G++Y WG N +GQ G
Sbjct: 275 LGHGSDV-HVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    A     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++++  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  V+  +C 
Sbjct: 259 IQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIVEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDALSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG   + A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 198 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 245

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + ++  +V+CG+ HT  L +
Sbjct: 246 PTPCRIAALQGIRIQRVACGYAHTLVLTD 274



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDALSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  + + GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P R+        + +V+CG+ HT  ++ EG++  WG      
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRIAA-LQGIRIQRVACGYAHTLVLTDEGQVYAWG------ 282

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPAPVVVEKDRIVEIAACHSAHTSA 323



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +V+I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 136/272 (50%), Gaps = 19/272 (6%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG G ++S   P    +     +  L+ G G H +  TE G VY  G N + QLG + 
Sbjct: 93  GCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLG-NG 151

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P ++S   + K+V++++ G HHS  +T DGE+Y WG N++GQ+G G  A +  
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQ-- 209

Query: 166 PIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGS---------SG 260

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
           ++ TP  I  L+G++V+  A G  H+  + + G++Y +G  +  ++     ++   P+ +
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV 320

Query: 285 S--KLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           +  K    E   C   HT    T  G++Y WG
Sbjct: 321 TVDKDRVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 142/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++TE   V+  G+N  G LG  + +  ++E
Sbjct: 47  KWPIFSLCSQEELKLIRQACVFGSAGNEVLYVTENDEVFVLGMNCSGCLGTGD-VQSTIE 105

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE+Y WG N+  QLG G     ++P      
Sbjct: 106 PKRLDSLCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTN 165

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            L      + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 166 -LVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGS---------TANQPIPRRV 215

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + ENG VY++G     ++      +   P  I+ L    
Sbjct: 216 TSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 275

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 276 VQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVD-KDRVIEIAACH 334

Query: 350 WKHTAA--ISEGKILTWG 365
             HT+A     G++  WG
Sbjct: 335 SAHTSAAKTQSGQVYMWG 352



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 26/235 (11%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           VT   +V   G   SG LG G        ++ST E  P+ +  L G K+   + G   H 
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGD-------VQSTIE--PKRLDSLCGKKIACLSYGSGPHV 128

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGG 307
               E G VY +G  A  ++     NH   P  +S    ++   EV CG +H+ VLTS G
Sbjct: 129 VLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDG 188

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
           E+YTWG N +G +G GS      P RV        V  ++CG   + A+ E G++  WG+
Sbjct: 189 EVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGY 248

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G+            GQLG G+  +   P  +   + ++  +V+CG  HT  L +
Sbjct: 249 NGN------------GQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD 291



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 32/288 (11%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTG 194
           +T + E+++ G N +G LG G   + + P   +++ L G   K A L +      V  T 
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGDVQSTIEP--KRLDSLCG--KKIACLSYGSGPHVVLATE 133

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG     +LG+G  +  L   + ++    + + E+        A G  HS  + 
Sbjct: 134 EGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEV--------ACGSHHSMVLT 185

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
            +G VY +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y 
Sbjct: 186 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 245

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
           WG N NG LG+GS     +P R+        V +V+CG  HT  ++ EG+I  WG     
Sbjct: 246 WGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGCAHTLVLTDEGQIYAWG----- 299

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                   +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 300 -------ANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSA 340



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 74/139 (53%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 245 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYG 304

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  V++I+  +  H S+A T  G++YMWG+   GQ     
Sbjct: 305 QLGTGNKSNQSY-PTTVTVDKDRVIEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ----- 357

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 358 --SVVLPHLTHFACTDDVF 374


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 178/379 (46%), Gaps = 51/379 (13%)

Query: 57  ESRWRPVVCSAF--EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +SR+   + S F      +K ++CG  HT  + ++G V+  G NDFGQLG   +     +
Sbjct: 20  KSRFAEDLSSHFFVRNDPVKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFG-HTKIVNK 78

Query: 115 PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPTKV 171
           P  +  LK  + + ++ G  H+   T   +++ +G NS+GQLG+G    + +P  I T +
Sbjct: 79  PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           E  + I    A  G   S  +T  G V  WG    G+ G   E+ +L          PR 
Sbjct: 139 EKTNNIIALSA--GCHHSAFLTEEGSVYIWGDNSDGQCGIKNENYLLN---------PRK 187

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I E +   +   + G+ H+A I   G+VY FG+    K+        R   L + +P   
Sbjct: 188 I-EFQN-PINSISCGYYHTAFISL-GKVYTFGEDDNGKL-------GRSDKLPNDVPEGV 237

Query: 292 E-------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPV 343
           E       V CGG HT +LT  G+ Y +GSN +G LG+G+ +   S P+RV   F++  V
Sbjct: 238 ELDENCISVKCGGSHTIILTESGKAYAFGSNFSGQLGLGNFETEFSIPQRVN--FTDENV 295

Query: 344 D--QVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           +   V+CG  H+A ++ EGK+ T G G +    +ED  +           +   PT +  
Sbjct: 296 NLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDEST-----------NICTPTTIEM 344

Query: 401 GENVKALQVSCGFNHTGAL 419
            ++     VSCG  HT  L
Sbjct: 345 FKSFFCTYVSCGGCHTMVL 363



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 142/286 (49%), Gaps = 25/286 (8%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRP-VVCSAFEK-HSLKALACGGAHTLFLTE 88
           IS+   + FA  +G    G+LG+G L+ RW P ++ +  EK +++ AL+ G  H+ FLTE
Sbjct: 102 ISTECNKIFA--FGCNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTE 159

Query: 89  TGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            G VY  G N  GQ GI +N  Y L P +I   +  +  IS GY+H++ I++ G++Y +G
Sbjct: 160 EGSVYIWGDNSDGQCGI-KNENYLLNPRKIE-FQNPINSISCGYYHTAFISL-GKVYTFG 216

Query: 149 KNSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           ++ NG+LG   K    +P  +     C+S         G   ++ +T  GK  ++G+  S
Sbjct: 217 EDDNGKLGRSDKLPNDVPEGVELDENCIS------VKCGGSHTIILTESGKAYAFGSNFS 270

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG       LG   +      R+    E V +     G  HSA + + G++Y  GD  
Sbjct: 271 GQLG-------LGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGR 323

Query: 267 VDKMLFQ-EGNHARRPSLIS--KLPYSEEVVCGGYHTCVLTSGGEL 309
             K+  + E  +   P+ I   K  +   V CGG HT VL    +L
Sbjct: 324 NGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHTMVLAKALKL 369



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 156/331 (47%), Gaps = 36/331 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           L+G  D+G+LG G  +   +P    + +      +ACG +HTL  TE   ++A G N  G
Sbjct: 59  LFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDG 118

Query: 102 QLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG+ +     +  +  + L+K   ++ +S G HHS+ +T +G +Y+WG NS+GQ G+  
Sbjct: 119 QLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWGDNSDGQCGI-- 176

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  P K+E  + I     + G+  + A    GKV ++G   +G+LG         
Sbjct: 177 KNENYLLNPRKIEFQNPI--NSISCGYYHT-AFISLGKVYTFGEDDNGKLGR-------- 225

Query: 220 FLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S+  P  +    EL+   + +   G  H+  + E+G+ Y FG     ++    GN
Sbjct: 226 -----SDKLPNDVPEGVELDENCISVKCGG-SHTIILTESGKAYAFGSNFSGQLGL--GN 277

Query: 277 HARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENG--CLGIGSIDVL 328
                S+  ++ +++E      V CG  H+  LT  G+LYT G   NG  C    S ++ 
Sbjct: 278 FETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNIC 337

Query: 329 HSPERVQGPFSESPVDQVSCGWKHTAAISEG 359
            +P  ++  F       VSCG  HT  +++ 
Sbjct: 338 -TPTTIE-MFKSFFCTYVSCGGCHTMVLAKA 366



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 161/341 (47%), Gaps = 42/341 (12%)

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELY 145
           + +TG V+  G + F +  +S +     +P++         +IS G  H++ +   G ++
Sbjct: 9   IPDTGAVFTFGKSRFAE-DLSSHFFVRNDPVK---------EISCGDEHTALVCKSGRVF 58

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           ++GKN  GQLG G    K++  P+ ++ L    +   A G   ++  T   K+ ++G   
Sbjct: 59  LFGKNDFGQLGFGH--TKIVNKPSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNS 116

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIK-ELEGVKVKIA-AAGFLHSACIDENGRVYIFG 263
            G+LG G              + P++I  +LE     IA +AG  HSA + E G VYI+G
Sbjct: 117 DGQLGVGD---------LDDRWVPQMISTDLEKTNNIIALSAGCHHSAFLTEEGSVYIWG 167

Query: 264 DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           D +  +   +  N+   P  I        + CG YHT  + S G++YT+G ++NG LG  
Sbjct: 168 DNSDGQCGIKNENYLLNPRKIEFQNPINSISCGYYHTAFI-SLGKVYTFGEDDNGKLGRS 226

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 382
                  PE V+    E+ +  V CG  HT  ++E GK   +G   S            G
Sbjct: 227 DKLPNDVPEGVE--LDENCI-SVKCGGSHTIILTESGKAYAFGSNFS------------G 271

Query: 383 QLGHGN-DVDYIHPTIVNF-GENVKALQVSCGFNHTGALLE 421
           QLG GN + ++  P  VNF  ENV  + V+CG +H+  L +
Sbjct: 272 QLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTD 312


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2186 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEAT 2245

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2246 NGRLGLGISSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2304

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2305 GH--------FSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 2356 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 2415

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 2416 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 2462

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 2463 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 2499



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 172/386 (44%), Gaps = 38/386 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3184 WGHNHRGQLGGIEGAKVKVPTPCEALA--ALRPVQLIGGEQTLFAVTADGKLYATGYGAG 3241

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3242 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3299

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3300 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3354

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L+  L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3355 ------SEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3409 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3468

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
            +VQG      V  ++ G  H    +E    TW            G +  GQLG G     
Sbjct: 3469 QVQG-LQGKKVIAIATGSLHCVCCTEDGSYTW------------GDNDEGQLGDGTTNAI 3515

Query: 393  IHPTIVNFGENVKALQVSCGFNHTGA 418
              P +V   +  K  +V+CG  HT A
Sbjct: 3516 QRPRLVAALQGKKVNRVACGSAHTLA 3541



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2224 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRH 2283

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2284 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2341

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2342 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2392

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2393 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2452

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2453 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2507

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2508 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2242 GEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2301

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2302 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2360

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2361 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2414

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2415 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2469

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2470 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 2529

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 2530 G-LEGQKITRVACGSSHSVA 2548



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2296 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2355

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2356 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2413

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2414 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2470

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2471 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2519

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2520 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 2551



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 139/316 (43%), Gaps = 21/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3250 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3308

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    V+ 
Sbjct: 3309 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVDA 3366

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3367 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3417

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3418 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3477

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  G  YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3478 VIAIATGSLHCVCCTEDGS-YTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 3535

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 3536 SAHTLAWSTSKPASAG 3551



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 133/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2178 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2287

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 2288 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 2347

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 2348 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 2403

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 2404 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 2445



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3179 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3237

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3238 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3297

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3298 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3348

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 3349 RLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3408

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3409 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3455

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3456 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3487


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L      C  R ++ T ++     WG    GRLG G+     RP +  +     
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309

Query: 73  LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           +  ++CG  HT  +T +G ++    G  + G LG    + Y L P ++SG  +  +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS+  T  G+LY +G  + G LG G +  + +  P +VE LSG  T + A G   
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+      TG      K+ +WG G   RLGHG +   L          P+ ++ L   
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
                A G   +  +  +GRV+  G  + +  L    +  ++P L+     SE   E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H  VLTS  E+YTWG   NG LG G +     P  V+    +  V  +SCG   T  
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595

Query: 356 I 356
           I
Sbjct: 596 I 596



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 163/368 (44%), Gaps = 50/368 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           +  +ACG  H    T  G V+  G    G+LG   +   S  P  +  L   VV  IS G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADIS-RPKLVESLSLTVVDLISCG 316

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
             H+ A+T  G+L+ WG  S   G LG G + +    +P KV   L G+     A G   
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVS--YWLPKKVSGPLEGLQVLSVACGSWH 374

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S   T  GK+ ++G G  G LGHG         R T  Y P+ ++ L G K    A G  
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGD--------RETLAY-PKEVEALSGFKTIKVACGIW 425

Query: 249 HSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYS-EE 292
           HSA I E          + ++Y +GD   +++    G+  + P L+ K     L Y+  +
Sbjct: 426 HSAAIVEVTNQTGANVMSKKLYTWGDGDKNRL----GHGDKEPRLVPKCVQALLEYNFHQ 481

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG   T  L + G ++T GS+ NG LG    D    P  VQ   +   V+++SCG  H
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDG-KQPCLVQDRLASELVEEISCGASH 540

Query: 353 -TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            T   S  ++ TWG G +            G+LGHG+  D   P +V   ++     +SC
Sbjct: 541 VTVLTSRSEVYTWGMGAN------------GRLGHGDLKDRKKPCLVEALKDRHVKSISC 588

Query: 412 GFNHTGAL 419
           G N T  +
Sbjct: 589 GSNFTTCI 596



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 45/300 (15%)

Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           G++Y+WG+       S+G          V+ IP  +E    +   Q A G       T  
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG    GRLGHG ++ I           P+L++ L    V + + G  H+  +  
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
           +G ++ +GD + +  L   G       P  +S      +V+   CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
           T+G    G LG G  + L  P+ V+   S     +V+CG  H+AAI E            
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           K+ TWG G  +            +LGHG+    + P  V         Q++CG N T AL
Sbjct: 445 KLYTWGDGDKN------------RLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVAL 492



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 17/198 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H A     G V+ +G+    ++         RP L+  L 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  + + CG +HTC +T+ G+L+ WG  S   G LG G+      P++V GP     V 
Sbjct: 307 LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVL 366

Query: 345 QVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            V+CG W      S GK+ T+G     GTF        G LGHG+     +P  V     
Sbjct: 367 SVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAYPKEVEALSG 414

Query: 404 VKALQVSCGFNHTGALLE 421
            K ++V+CG  H+ A++E
Sbjct: 415 FKTIKVACGIWHSAAIVE 432


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 139/292 (47%), Gaps = 34/292 (11%)

Query: 44  GNGDYGRLGLGSLES--------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           G G  G LGLG+ +         +  PV+ +    H       GG H + LT  G VY+ 
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHP------GGRHAMALTAEGKVYSW 235

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G  D GQLG    +GY L+P  I  LK KEV +I+ G  HS A+  DG+++ WG  SNG 
Sbjct: 236 GCGDRGQLGHGNTLGY-LDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   A++  +P K+  L+G      A G   ++AV  G  V SWG GG+G LG+G E
Sbjct: 295 LGHGNNLAQL--LPKKIMSLNGKHIMAVACGECYTIAV-AGDDVWSWGLGGNGELGYGVE 351

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                     S Y P  I+ L    +   A G+  S  +  NG+V+ +G  + D+     
Sbjct: 352 MP--------SYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWG--SGDRFRLGL 401

Query: 275 GNHA--RRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           GN     +P  I    K    + VV   +H   +   G++Y WGS E G +G
Sbjct: 402 GNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 116/227 (51%), Gaps = 14/227 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD G+LG G+      P +    +   +  +ACG  H++ +   G +++ G    G 
Sbjct: 235 WGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGA 294

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   N+   L P +I  L  K ++ ++ G  ++ A+  D +++ WG   NG+LG G + 
Sbjct: 295 LGHGNNLA-QLLPKKIMSLNGKHIMAVACGECYTIAVAGD-DVWSWGLGGNGELGYGVEM 352

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                +PTK+E L        A G+  S AV+  GKV +WG+G   RLG G E  I+   
Sbjct: 353 PSYY-MPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIV--- 408

Query: 222 RSTSEYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
                  PR I+ +L+G K+K   A   H+  IDENG+VYI+G + +
Sbjct: 409 ------KPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEI 449



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 36/285 (12%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPI-PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           E+Y+WG   N  L   +K     P+ P K + L  +     A G++    V+  G + + 
Sbjct: 126 EVYVWGSKRNLLLAADEKN----PLEPDKSKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRV 259
           G G  G LG G    +           PR I +L  V V   A   G  H+  +   G+V
Sbjct: 182 GKGHMGCLGLGNCDDV---------NVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKV 232

Query: 260 YIFGDRAVDKMLFQEGNHA--RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSN 315
           Y +G    D+     GN      P+LI +L   E  ++ CG  H+  + S G++++WG  
Sbjct: 233 YSWG--CGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDG 290

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
            NG LG G+      P+++    +   +  V+CG  +T A++   + +WG GG+      
Sbjct: 291 SNGALGHGNNLAQLLPKKIMS-LNGKHIMAVACGECYTIAVAGDDVWSWGLGGN------ 343

Query: 376 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 G+LG+G ++  Y  PT +          V+CG+  + A+
Sbjct: 344 ------GELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAV 382



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 19/171 (11%)

Query: 255 ENGRVYIFGDRAVDKMLFQEGN--HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           E   VY++G +    +   E N     +  L+  L  S+ + CG     V++  G ++  
Sbjct: 123 EPSEVYVWGSKRNLLLAADEKNPLEPDKSKLLENLDPSD-IACGYDSLFVVSRNGGIFAC 181

Query: 313 GSNENGCLGIGSIDVLHSPERVQG--PFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGS 369
           G    GCLG+G+ D ++ P ++    P   + V  +  G +H  A++ EGK+ +WG G  
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTV-AIHPGGRHAMALTAEGKVYSWGCGDR 240

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                       GQLGHGN + Y+ PT+++  ++ +  +++CG  H+ A+L
Sbjct: 241 ------------GQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVL 279



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 5/175 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G  G LG G+  ++  P    +     + A+ACG  +T+ +     V++ GL   G+
Sbjct: 287 WGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDD-VWSWGLGGNGE 345

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    +     P +I  L  K +  ++ GY  S A++ +G+++ WG     +LGLG + 
Sbjct: 346 LGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNE- 404

Query: 162 AKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            KVI  P +++  L G   K+       ++A+   G+V  WG+   G +G+ +++
Sbjct: 405 -KVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGNDEDA 458


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 123 IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 182

Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P R+      ++  I+T   H++AIT  GELYMWG+           
Sbjct: 183 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 241

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 242 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 298

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  LEGV++   A G  HS  + E G+V  +G     ++     
Sbjct: 299 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 351

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V    GG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 352 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 411

Query: 333 RVQ 335
            V 
Sbjct: 412 EVN 414



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 126/308 (40%), Gaps = 54/308 (17%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPT------------------KVECLSGIFTKQAAL 184
           +L+ WG+ ++GQLG G +  ++ P P                   +++  S  F    + 
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   S  +T  G +  WG G  GRLG GQE+S+         + P L    E   ++  A
Sbjct: 109 GLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSV---------FVPNLNPLFEEHSIRCIA 158

Query: 245 AGFLHSACIDENGRVYIFGDR---AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
            G LHS  +   G V+ +G     A+   ++      RR         S  +   G HT 
Sbjct: 159 LGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISA-IATSGTHTA 217

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGPFSESPVDQVSCGWKHTA 354
            +T  GELY WG  E                  L  P +V+      PV  VSCG   T 
Sbjct: 218 AITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKA--LTVPVASVSCGGFFTM 275

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
           A++ EG++  W WG +          S  +LG G+++    P  V   E V+  Q++CG 
Sbjct: 276 ALTKEGQL--WNWGAN----------SNYELGRGDNLGGWEPMPVPSLEGVRITQIACGG 323

Query: 414 NHTGALLE 421
            H+ AL E
Sbjct: 324 YHSLALTE 331


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 28/304 (9%)

Query: 123  KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            ++VV +S G++H +A+T +G +Y WG+N +G+LG G K+      P +V        K+ 
Sbjct: 875  RQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEV 934

Query: 183  ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G E ++A T  G V  WG G  G+LG G           T  + P  IK L  + V  
Sbjct: 935  VCGGEHTLARTESGSVYGWGNGRIGQLGLGDR---------TLHWLPVPIKTLRKMHVTQ 985

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----PSLISKLPYSEEVVCGGY 298
             AAG+ H+  + ++G V +FG   V ++    G   R+    P+ +  +P   +  CG  
Sbjct: 986  LAAGYAHTIVVLKSGEVMVFGGGEVGQL----GTGMRKDLLVPTKLQAMPSIVQAACGYC 1041

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESPVDQVSCGWKHTA 354
            HT +LT  GE+YT GS  +G L  G  D L     +P+ V+G  +   +  ++CG  HT 
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQL--GHADNLQNDRLAPKMVEG-LNGKRIRFIACGSFHTI 1098

Query: 355  AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
            AI++   + + WGG  GT   D   +  Q      +  + P+IV      +   VSCG  
Sbjct: 1099 AITDLDNV-YTWGGVQGT---DSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHA 1154

Query: 415  HTGA 418
            H+ A
Sbjct: 1155 HSVA 1158



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 137/303 (45%), Gaps = 29/303 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WGNG  G+LGLG     W PV      K  +  LA G AHT+ + ++G V   G  + GQ
Sbjct: 953  WGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQ 1012

Query: 103  LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            LG        L P ++  +   +VQ + GY H++ +T  GE+Y  G   +GQLG      
Sbjct: 1013 LGTGMRKDL-LVPTKLQAMPS-IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQ 1070

Query: 163  KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW----GAGGSGRLGHGQESSIL 218
                 P  VE L+G   +  A G   ++A+T    V +W    G    G +   ++++IL
Sbjct: 1071 NDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAIL 1130

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR-AVDKMLFQEGN- 276
                     TP ++K L G ++ + + G  HS     +G VY++    ++   L   G+ 
Sbjct: 1131 ------KRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSG 1184

Query: 277  ------HARRPSLISKLP-----YSEEVV----CGGYHTCVLTSGGELYTWGSNENGCLG 321
                      P L+S +P      S+ VV     G   T V+T  G LY+WGS   G LG
Sbjct: 1185 LSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGLLYSWGSGAFGQLG 1244

Query: 322  IGS 324
            +G 
Sbjct: 1245 LGD 1247



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 135/285 (47%), Gaps = 24/285 (8%)

Query: 43   WGNGDYGRLGLGSLE--SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
            WG    G LG G      +  P     F+   +K + CGG HTL  TE+G VY  G    
Sbjct: 899  WGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRI 958

Query: 101  GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            GQLG+ +   + L P+ I  L+K  V Q++ GY H+  +   GE+ ++G    GQLG G 
Sbjct: 959  GQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGM 1017

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +  K + +PTK++ +  I   QAA G+  +  +T  G+V + G+  SG+LGH        
Sbjct: 1018 R--KDLLVPTKLQAMPSIV--QAACGYCHTALLTEAGEVYTCGSAMSGQLGHADN----- 1068

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG---DRAVDKMLFQEGN 276
                     P++++ L G +++  A G  H+  I +   VY +G       D  + QE  
Sbjct: 1069 --LQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERK 1126

Query: 277  HA--RR--PSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
             A  +R  PS++  L       V CG  H+   T  GE+Y W S 
Sbjct: 1127 AAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDGEVYVWSST 1171



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 146/319 (45%), Gaps = 50/319 (15%)

Query: 76   LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVV-QISTGYH 133
            ++CG  H   LTE G VY  G N  G+LG  +  G   L P ++   K + V ++  G  
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939

Query: 134  HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            H+ A T  G +Y WG    GQLGLG +    +P+P K   L  +   Q A G+  ++ V 
Sbjct: 940  HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT--LRKMHVTQLAAGYAHTIVVL 997

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
              G+V+ +G G  G+LG G    +L  + +  +  P +++         AA G+ H+A +
Sbjct: 998  KSGEVMVFGGGEVGQLGTGMRKDLL--VPTKLQAMPSIVQ---------AACGYCHTALL 1046

Query: 254  DENGRVYIFG---------------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY 298
             E G VY  G               DR   KM+  EG + +R   I+         CG +
Sbjct: 1047 TEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMV--EGLNGKRIRFIA---------CGSF 1095

Query: 299  HTCVLTSGGELYTW----GSNENGCL---GIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            HT  +T    +YTW    G++ +G +      +I    +P  V+G   +  +  VSCG  
Sbjct: 1096 HTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR-ISLVSCGHA 1154

Query: 352  HTAAIS-EGKILTWGWGGS 369
            H+ A + +G++  W   GS
Sbjct: 1155 HSVATTMDGEVYVWSSTGS 1173



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 24/190 (12%)

Query: 239  KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL------ISKLPYSEE 292
            +V   + G+ H A + ENG VY +G     ++    G+ +  P L        K    +E
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGEL--GHGDKSGVPQLHPKQVIFFKSKCVKE 933

Query: 293  VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
            VVCGG HT   T  G +Y WG+   G LG+G   +   P  ++    +  V Q++ G+ H
Sbjct: 934  VVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKT-LRKMHVTQLAAGYAH 992

Query: 353  T-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            T   +  G+++ +G G              GQLG G   D + PT +    ++  +Q +C
Sbjct: 993  TIVVLKSGEVMVFGGG------------EVGQLGTGMRKDLLVPTKLQAMPSI--VQAAC 1038

Query: 412  GFNHTGALLE 421
            G+ HT  L E
Sbjct: 1039 GYCHTALLTE 1048



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 15/89 (16%)

Query: 336 GPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDY 392
           G  S   V  VSCGW H AA++E G + TWG  GS            G+LGHG+   V  
Sbjct: 870 GLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGS------------GELGHGDKSGVPQ 917

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
           +HP  V F ++    +V CG  HT A  E
Sbjct: 918 LHPKQVIFFKSKCVKEVVCGGEHTLARTE 946


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 173/387 (44%), Gaps = 57/387 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G++ +R  P+         +  L+ G +H + L   G  +  GLN  GQ
Sbjct: 224 WGDNRSGQLGDGTVTTRGNPLQVLGLT--GVVTLSAGASHCVALRSNGTAWTWGLNTMGQ 281

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S+ P ++ GL  +V+    G +HS A+  DG ++ WG N   QLG G   +
Sbjct: 282 LGDGTTTQRSV-PAQV-GL-TDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTS 338

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            ++PI      LSG  T  A  GF+ S+ +   G V SWG    G+LG G          
Sbjct: 339 SLLPIQAG---LSGGITLVA--GFKHSLTLRADGTVWSWGDNVFGQLGDG---------- 383

Query: 223 STSEYTPRLIKELEGVKVKIA---------AAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
               Y PR+        V++A         A+G LHS   D  GRV+ +GD    ++   
Sbjct: 384 ---TYQPRM------SPVRVATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNG 434

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            G     P+L + L  +  VV G  HT VL     ++ WG N  G +G G+      P R
Sbjct: 435 IGADKLTPAL-TGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPVR 493

Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G    S +  +S G  H+ A+ ++G +  WG       F+       GQLG+G  VD 
Sbjct: 494 VLG---LSGITAISAGAYHSLALRTDGTVWAWG-------FNRY-----GQLGNGGTVDQ 538

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGAL 419
             P  V     V A  ++ G +H+ AL
Sbjct: 539 NQPVQVAGLSGVTA--IAAGHSHSLAL 563



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 159/359 (44%), Gaps = 36/359 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG G    +  P +       S+ A   G  HT+ L     V+A G+N  G+
Sbjct: 423 WGDNEDGQLGNGIGADKLTPALTGLTGAVSVVA---GNRHTVVLKGDTTVWAWGVNSRGE 479

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           +G   N   S +P+R+ GL   +  IS G +HS A+  DG ++ WG N  GQLG G    
Sbjct: 480 VGDGTNANTS-QPVRVLGLSG-ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVD 537

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  LSG+     A G   S+A+ G G V +WG    G++G G          
Sbjct: 538 QNQPV--QVAGLSGV--TAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSG---------- 583

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T+ +    ++ +    V    AG  HS  +  +G V+ +G     ++          P 
Sbjct: 584 -TNNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALASLNAPG 642

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +S L     +  G YH+  L S G +  WG N +G +G GS+   H P  V G    S 
Sbjct: 643 PVSNLTGVVSIAAGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAG---MSG 699

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
           V  V  G  H+ A+ S+G   TW WG           ++ GQLG G   D I P  V  
Sbjct: 700 VVSVIAGDHHSMAMRSDGT--TWAWGA----------NTEGQLGDGTRNDSIIPVRVEL 746



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 167/378 (44%), Gaps = 45/378 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG GS      PV         + ++A G AH+  L   G V+A G N + Q
Sbjct: 124 WGDNYSGQLGTGSTAVSAEPVQVQGLS--GVLSVASGFAHSAALRSDGTVWAWGDNRYRQ 181

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG     G S  P+++ GL   V+ ++ G + + A+  DG ++ WG N +GQLG G    
Sbjct: 182 LG-PLTAGSSSVPVQVPGLGG-VIAVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTT 239

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V  L+G+ T  A  G    VA+   G   +WG    G+LG G          
Sbjct: 240 RGNPL--QVLGLTGVVTLSA--GASHCVALRSNGTAWTWGLNTMGQLGDGT--------- 286

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T    P  +   +   V  A AG  HS  +  +G V+ +G    D    Q GN     S
Sbjct: 287 TTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSDGAVWAWG----DNRYRQLGNGNMTSS 339

Query: 283 LI---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           L+   + L     +V G  H+  L + G +++WG N  G LG G+     SP RV     
Sbjct: 340 LLPIQAGLSGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTL 399

Query: 340 ESPVDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            +P   V+ G  H+    S G++ +WG        +ED     GQLG+G   D + P + 
Sbjct: 400 GNP--GVASGQLHSVYRDSAGRVWSWG-------DNED-----GQLGNGIGADKLTPALT 445

Query: 399 NFGENVKALQVSCGFNHT 416
                  A+ V  G  HT
Sbjct: 446 GL---TGAVSVVAGNRHT 460



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 164/358 (45%), Gaps = 37/358 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G+LG G+ + R  PV   A        +A G  H+++    G V++ G N+ GQ
Sbjct: 372 WGDNVFGQLGDGTYQPRMSPVRV-ATTTLGNPGVASGQLHSVYRDSAGRVWSWGDNEDGQ 430

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    IG       ++GL   V  +  G  H+  +  D  ++ WG NS G++G G  A 
Sbjct: 431 LG--NGIGADKLTPALTGLTGAV-SVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNAN 487

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P+  +V  LSGI    A  G   S+A+   G V +WG    G+LG+G          
Sbjct: 488 TSQPV--RVLGLSGITAISA--GAYHSLALRTDGTVWAWGFNRYGQLGNGG--------- 534

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +  +  P  +  L GV     AAG  HS  +  +G V+ +G     ++     N    P 
Sbjct: 535 TVDQNQPVQVAGLSGVTA--IAAGHSHSLALCGDGTVWAWGYNFDGQIGSGTNNWHILPV 592

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE-S 341
               L     +  GGYH+  L S G +++WG N +G LG G++  L++P    GP S  +
Sbjct: 593 QAVGLSSVTAITAGGYHSLALRSDGTVWSWGYNGSGQLGNGALASLNAP----GPVSNLT 648

Query: 342 PVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            V  ++ G  H+ A+ S+G +  WG       F+ D     GQ+G G+  +   P +V
Sbjct: 649 GVVSIAAGDYHSLALRSDGTVRAWG-------FNFD-----GQIGDGSLTNRHVPVMV 694



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 151/353 (42%), Gaps = 35/353 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+   R  P      +   + A   G  H+L +   G V+A G N + Q
Sbjct: 274 WGLNTMGQLGDGTTTQRSVPAQVGLTD---VMAAVAGNYHSLAVRSDGAVWAWGDNRYRQ 330

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG + N+  SL P++ +GL   +  ++ G+ HS  +  DG ++ WG N  GQLG G    
Sbjct: 331 LG-NGNMTSSLLPIQ-AGLSGGITLVA-GFKHSLTLRADGTVWSWGDNVFGQLGDGTYQP 387

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           ++ P+      L        A G   SV     G+V SWG    G+LG+G  +  L    
Sbjct: 388 RMSPVRVATTTLG---NPGVASGQLHSVYRDSAGRVWSWGDNEDGQLGNGIGADKL---- 440

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                TP L      V V    AG  H+  +  +  V+ +G  +  ++      +  +P 
Sbjct: 441 -----TPALTGLTGAVSV---VAGNRHTVVLKGDTTVWAWGVNSRGEVGDGTNANTSQPV 492

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  G YH+  L + G ++ WG N  G LG G     + P +V G    S 
Sbjct: 493 RVLGLSGITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQPVQVAG---LSG 549

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           V  ++ G  H+ A+  G    W W          G++  GQ+G G +  +I P
Sbjct: 550 VTAIAAGHSHSLALC-GDGTVWAW----------GYNFDGQIGSGTNNWHILP 591



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 135/301 (44%), Gaps = 30/301 (9%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIS 129
           + S+  L+ G  H++ +   G V+A G N  GQLG +     S  P+++  L  + V ++
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLG-NGLFTNSPTPVKVKNLT-DAVAVA 106

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           +G  HS A+  DG ++ WG N +GQLG G  A    P+  +V+ LSG+ +   A GF  S
Sbjct: 107 SGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPV--QVQGLSGVLS--VASGFAHS 162

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+   G V +WG               LG L + S   P  +  L GV + +AA G   
Sbjct: 163 AALRSDGTVWAWGD---------NRYRQLGPLTAGSSSVPVQVPGLGGV-IAVAAGGNT- 211

Query: 250 SACIDENGRVYIFGDRAV----DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           +  +  +G V+ +GD       D  +   GN    P  +  L     +  G  H   L S
Sbjct: 212 TLALRADGTVWAWGDNRSGQLGDGTVTTRGN----PLQVLGLTGVVTLSAGASHCVALRS 267

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 364
            G  +TWG N  G LG G+      P +V      + V     G  H+ A+ S+G +  W
Sbjct: 268 NGTAWTWGLNTMGQLGDGTTTQRSVPAQV----GLTDVMAAVAGNYHSLAVRSDGAVWAW 323

Query: 365 G 365
           G
Sbjct: 324 G 324



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 124/287 (43%), Gaps = 31/287 (10%)

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +  V ++S G +HS  +  DG ++ WG N  GQLG G       P P KV+ L+      
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNS--PTPVKVKNLTDAVA-- 104

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   S+A+   G V +WG   SG+LG G          +     P  ++ L GV   
Sbjct: 105 VASGDSHSLALRSDGTVWAWGDNYSGQLGTGS---------TAVSAEPVQVQGLSGVLS- 154

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
             A+GF HSA +  +G V+ +GD    ++       +  P  +  L     V  GG  T 
Sbjct: 155 -VASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVPGLGGVIAVAAGGNTTL 213

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGK 360
            L + G ++ WG N +G LG G++    +P +V G    + V  +S G  H  A+ S G 
Sbjct: 214 ALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLG---LTGVVTLSAGASHCVALRSNGT 270

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
             TW            G ++ GQLG G       P  V   + + A+
Sbjct: 271 AWTW------------GLNTMGQLGDGTTTQRSVPAQVGLTDVMAAV 305


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLDALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              L P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  ++  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V ++IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-IEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 29/311 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K++
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLD 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  L  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   E  + ++
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHI-MVEKERVIE 288

Query: 409 V-SCGFNHTGA 418
           + +C   HT A
Sbjct: 289 IAACHSAHTSA 299



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 103/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ +  L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLDALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           LG + N    L P  I   K+ V++I+  +  H S+A T  G +YMWG+
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 184/438 (42%), Gaps = 85/438 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
           WG G YG LG G     + PV         S  +K ++               + G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L +++V ++ G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +   G G++ S  G + +     P+ + ++E   + I AAG  HSA +   G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434

Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
           G     ++   +  +   P  ++ L                     YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494

Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
                       CG  HT  LT  G ++ WGSN++G LG+G        E V+     +P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTP 554

Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           + +++CG KH  A+++ G +  W            G +  GQLG G       P  V   
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPSFEPAAVTAL 602

Query: 402 ENVKALQVSCGFNHTGAL 419
              +A+ V CG +++  +
Sbjct: 603 R--QAVDVFCGDDYSACI 618



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)

Query: 42  LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
            GQLG+   +  S EP  ++ L+ + V +  G  +S+ IT       V GE       L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTALR-QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639

Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
            WG   +G+LGLG+  A          V  +P               +V C+S  F+   
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+  +WGAG  GRLG G          + + YTP      +GV+++ 
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
            AAG  HS  +  +G ++ +G R   +      N+   P +  +L      P  + +   
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803

Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
             H+  +T  GE++ WG N   + GC G    + L  PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 168/428 (39%), Gaps = 93/428 (21%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    S  P+R+  
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE V +             S G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              + P          I    A  G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
                   PR ++   GV V   A G  H+  +   G V+ +G  A   + F EG     
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396

Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWG--------------------- 313
                P  +S +  +   +  G YH+  +T GG+L  WG                     
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456

Query: 314 ---------SNENGCLGI-------GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
                    S+    LG+         +DVL  P       S   +  + CG  HT A++
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFN 414
            G    W W          G +  GQLG G DV  D   P  +  F   ++  +++CG  
Sbjct: 517 -GAGAVWVW----------GSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR--RIACGSK 563

Query: 415 HTGALLEY 422
           H  A+ +Y
Sbjct: 564 HCLAVAQY 571



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 187/455 (41%), Gaps = 102/455 (22%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN---D 99
           WG+G +GRLG G       P     F    +  +ACG  HTL LT  G V+A G      
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+ G   + G    P  +S ++  V+ I+ G +HS+A+TV G+L +WG   + +LG G 
Sbjct: 388 FGE-GEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD 446

Query: 160 KAAKVIPIPTKVECLSG---IFTKQAALGFEQ---------------------------- 188
           +  +  P P  V  L     +   Q+ LG  +                            
Sbjct: 447 QQNQ--PFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQS 504

Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
                  ++A+TG G V  WG+   G+LG G++           +Y P  + E     ++
Sbjct: 505 LECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV-------EEDQYEPVKL-ECFSTPIR 556

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
             A G  H   + + G V+ +G     ++       +  P+ ++ L  + +V CG  Y  
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSA 616

Query: 301 CVLTSG-------------GELYTWGSNENGCLGIGSIDV----LHSPERV--QGPFSES 341
           C+ + G             G+L+ WG+ E+G LG+G  DV    + +P++V    P    
Sbjct: 617 CITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE-DVASGSILTPQKVVFSVPVCAC 675

Query: 342 PVD--------QVSC--------GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 384
            +D        +V C        G  H+ AI+ +G+   WG G              G+L
Sbjct: 676 SLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAG------------YYGRL 723

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G   +   PT  +F + V+   V+ G  H+ AL
Sbjct: 724 GIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 155/375 (41%), Gaps = 44/375 (11%)

Query: 68  FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           F   S+K +A G  HTL +   G    ++  G N    LG+   I   + P  +    K 
Sbjct: 43  FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102

Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
              ++S G ++S+ +        G++Y +G  + G+LG  K  A  +             
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162

Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P P++V         + + G + ++A++  G + +WG G  G LG G  S   
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222

Query: 219 GFLRST--SEYTPRLIKELEGVK--------VKIAAAGFLHSACIDENGRVYIFGDRAVD 268
             +R    SE      KE  GV         V   +AG  HS     +G ++ +G     
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++       +  P+++  +   + V    G  H+  +   G LYTWGS   G LG G   
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +  P +V+G F   PV QV+CG  HT A++ +G +  WG G + G F E    SGG + 
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMVA 400

Query: 386 HGNDVDYIHPTIVNF 400
               +  I   ++N 
Sbjct: 401 VPKHLSDIEAAVLNI 415



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 1/170 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YGRLG+G+  + + P  C   +   L+++A G  H+L L+  G ++  G  +   
Sbjct: 715 WGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC 774

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
              +         L   G   +V  IS    HS A+T  GE++ WG N   Q G GK+ A
Sbjct: 775 STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           + +  P +V  L     +  A G + S  +   G+V + G   SGRLG G
Sbjct: 835 ERLDRPERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 39/158 (24%)

Query: 291 EEVVCGGYHTCVLTSGGE---LYTWGSNENGCLGIGSIDVLHSPERV----QGPFSESPV 343
           + V  G YHT V+   G+   L+ WG N +  LG+G    +   ERV       FS+   
Sbjct: 49  KRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMG----VEIRERVFPGLVPFFSKMGT 104

Query: 344 DQVSCGWKHTAAISE------GKILTWGWG----------------GSHGTFSEDGHSSG 381
            +VSCG  ++A + +      GK+ T+G G                G  G FS DG   G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                        P+ V F +  K  ++SCG +HT AL
Sbjct: 165 PSWFTPK------PSRVRFRDKCKIARISCGADHTLAL 196


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 45  LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 94

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 95  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 152

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 153 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 204

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 205 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 264

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              G
Sbjct: 265 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 310

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 311 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 350



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 240 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 347 LMTELGLLYTFGDGRHGKLGLG 368



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 137 TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 191

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 192 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 240

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 241 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 299

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 300 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 358

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 359 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 132 CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 189

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 190 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 246

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 247 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 293

Query: 417 GALLEYV 423
             L E V
Sbjct: 294 VVLTEKV 300



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%)

Query: 239 KVKIAAAGF---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV- 294
           + +I  AGF      + + + G V+ FG     K  F E       ++ SK  +  ++  
Sbjct: 29  QAQIPFAGFGMAESESLVPDTGAVFTFG-----KTKFAE-------NIPSKFWFKNDIPI 76

Query: 295 ---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
              CG  HT ++T   +LY +GSN  G LG+GS   +  P  ++    E  V   +CG  
Sbjct: 77  CLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEK-VKLAACGRN 135

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG--NDVDYIHPTIVNFGENVKALQV 409
           HT       +++   GG +      G ++ GQLG G  +D D  H  IV F       Q+
Sbjct: 136 HT-------LVSTDTGGVYAA----GGNNEGQLGLGDTDDRDTFH-QIVFFTPADTIKQL 183

Query: 410 SCGFNHTGALLE 421
           S G N + AL E
Sbjct: 184 SAGANTSAALTE 195



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 402


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 101/311 (32%), Positives = 140/311 (45%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4036 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4094

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV I+ G  HS+ IT  GELY WGK   G+LG G    ++ P    VE 
Sbjct: 4095 PRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKP--KLVEA 4152

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4153 LQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4203

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L GV V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4204 IDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4263

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        +++V+CG
Sbjct: 4264 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKINRVACG 4322

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4323 SAHTLAWSTSK 4333



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 177/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3970 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4027

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4028 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4085

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L G      A G   S  +T  G++ +WG G  GRLGHG    
Sbjct: 4086 HGNRSP--CDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGD--- 4140

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4141 ------SEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194

Query: 275  GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4195 SDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4254

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4255 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4301

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4302 IQRPRLVAALQGKKINRVACGSAHTLA 4328



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 142/298 (47%), Gaps = 36/298 (12%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L+ T  +++ G  D G+LG  + +    EP  +S L      K+V+ I+ G  +
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLE-EPKLVSALSGKQTGKQVIHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT DGELY WG+ + G+LG G    + +P+   V  L G+     + G    Q+++V
Sbjct: 563 SAAITADGELYTWGRGNYGRLGHGSSEDQTVPM--LVTGLKGLKVVDVSCGSGDAQTLSV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + +     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDIVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           I ++G+VY +G     ++      H R P +++ L   +  +V  G  H   LT  GE+Y
Sbjct: 672 ITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVY 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW--KHTAAISEGKILTWGW 366
           +WGSN+  C    ++ +              PV  V  G   KH   IS G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRI------------AKPVPSVLPGLDSKHIVGISCGPAQSFAW 776



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 149/316 (47%), Gaps = 35/316 (11%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C A     +  +AC     L L+  G +Y    N+            +L P  + GL
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNN-----------NTLGPQLVQGL 490

Query: 122 -KKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIF 178
             + +V+I+      H  A++   EL+ WG    G+LG G   +  +  P  V  LSG  
Sbjct: 491 ASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHGDTVS--LEEPKLVSALSGKQ 548

Query: 179 T-KQA---ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE 234
           T KQ    A G   S A+T  G++ +WG G  GRLGHG          S  +  P L+  
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGS---------SEDQTVPMLVTG 599

Query: 235 LEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE- 291
           L+G+KV   +  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   + 
Sbjct: 600 LKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDI 659

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW 350
            +V CG   +  +T  G++Y+WG  +N  LG G+ + +  P+ + G   +  VD V+ G 
Sbjct: 660 VKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVD-VAVGS 718

Query: 351 KHTAAISE-GKILTWG 365
            H  A++E G++ +WG
Sbjct: 719 THCLALTESGEVYSWG 734



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 117/228 (51%), Gaps = 19/228 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-KHSLKA---LACGGAHTLFLTETGCVYATGLN 98
           WG GD GRLG G   S   P + SA   K + K    +ACG  ++  +T  G +Y  G  
Sbjct: 519 WGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRG 578

Query: 99  DFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQL 155
           ++G+LG   +   ++ P+ ++GLK  +VV +S  +G   + ++T +G+++ WG    G+L
Sbjct: 579 NYGRLGHGSSEDQTV-PMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E 
Sbjct: 638 GRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEE 695

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +           P+++  L+G KV   A G  H   + E+G VY +G
Sbjct: 696 HV---------RYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWG 734



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 128/291 (43%), Gaps = 30/291 (10%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2957 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTAE 3014

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPI--------PRQITALSNYVVKKVAVHSGGRHATAL 3066

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  +TS GELYT
Sbjct: 3067 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYT 3126

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3127 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3182

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
              G F        G+LG G       P  +         Q+ CG   + AL
Sbjct: 3183 -DGDF--------GKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLAL 3224



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 160/356 (44%), Gaps = 40/356 (11%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPE----RVQGPFSESPVDQVSCGWKHTAAISE----GKIL 362
            TW   ++ CL +      +  E    +V   F        +C       I +     K+ 
Sbjct: 3232 TWXXTKH-CLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVY 3290

Query: 363  TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
             WG         ++ H   GQ G+G       PT+V+  E  K  +V+CG +H+ A
Sbjct: 3291 AWG---------DNDH---GQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 143/329 (43%), Gaps = 32/329 (9%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+AIT  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-DRAVDKMLFQEGN 276
                 S     P+ I+ L G  V     G   S  + ++G V+ +   +    + F   N
Sbjct: 3194 -----SEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXN 3248

Query: 277  HARRPSLISKLPYSEEVVCGGY-HTCV---------LTSGGELYTWGSNENGCLGIGSID 326
            +     LI        V+ G Y  TC          +    ++Y WG N++G  G G+  
Sbjct: 3249 YLLELFLIKV--SVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTT 3306

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAA 355
            V   P  V G      + +V+CG  H+ A
Sbjct: 3307 VNRKPTLVHG-LEGQKITRVACGSSHSVA 3334



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 132/332 (39%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4023

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4024 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4083

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G +V   AAG  HSACI   G +Y +G     
Sbjct: 4084 LGHGNRSPC---------DRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYG 4134

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4135 RLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4194

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4195 SDGCKVPMKIDS-LTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4241

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4242 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4273



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A++   ++ SWG G  GRLGHG   S+           P+L+  L G +    V   A 
Sbjct: 508 LALSATSELFSWGCGDGGRLGHGDTVSL---------EEPKLVSALSGKQTGKQVIHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTC 301
           G  +SA I  +G +Y +G     ++          P L++ L      +V CG     T 
Sbjct: 559 GSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  + +V CG + + AI+ +G+
Sbjct: 619 SVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDIVKVRCGSQFSIAITKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P I+N  +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  +T +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
              ++   IP  +E L+G    Q   G + S+A+T  G V +W
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ +T+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQR 688

Query: 103 LG--ISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           LG    E++ Y   P  ++GL+ K+VV ++ G  H  A+T  GE+Y WG N   Q    L
Sbjct: 689 LGHGTEEHVRY---PKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQHFDTL 745

Query: 156 GLGKKAAKVIP 166
            + K    V+P
Sbjct: 746 RIAKPVPSVLP 756



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G H   L++  EL++WG  + G LG G    L  P+ V    G  +   V  ++CG  ++
Sbjct: 504 GQHYLALSATSELFSWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ +G++ TWG G              G+LGHG+  D   P +V   + +K + VSCG
Sbjct: 564 AAITADGELYTWGRGNY------------GRLGHGSSEDQTVPMLVTGLKGLKVVDVSCG 611



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P + +  +   +  +A G  H L LTE+G VY+ G ND   
Sbjct: 681 WGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTESGEVYSWGSNDQCQ 740

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L I++ +     P  + GL  K +V IS G   S A
Sbjct: 741 HFDTLRIAKPV-----PSVLPGLDSKHIVGISCGPAQSFA 775


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 61  LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 119

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 120 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 177

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G          + ++
Sbjct: 178 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN---------NVNQ 228

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 229 LTP----------VRVAA---LHSVCVNQ------------------------------- 244

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 245 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 297

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 298 ACHSAHTSAAKTQGGHVYMWG 318



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 106 WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 165

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 166 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 224

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 225 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 282

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 283 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 318



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  IP K+E
Sbjct: 20  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 76

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 77  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 133

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 134 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 188

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 189 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQIVC 247

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 248 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 296

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 297 AACHSAHTSA 306



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 40  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------IPKKLEALCGKKIKSLSYGS 90

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 91  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 150

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 151 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 210

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+V+ + P  V    +V   Q+ CG+ HT AL +
Sbjct: 211 GWGYNGN------------GQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 257



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 212 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 271

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 272 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 323

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T + C   +F
Sbjct: 324 -SVILPHLTHLSCTDDVF 340


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 173/386 (44%), Gaps = 37/386 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
           WG+   G+LG         P  C A        L  GG  TLF +T  G +YATG    G
Sbjct: 306 WGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL-IGGEQTLFAVTADGKLYATGYGAGG 364

Query: 102 QLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           +LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG 
Sbjct: 365 RLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLGH 422

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH      
Sbjct: 423 GNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD---- 476

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+     
Sbjct: 477 -----SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 531

Query: 276 NHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P +
Sbjct: 532 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQ 591

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           VQG      V  ++ G  H    +E G++ TW            G +  GQLG G     
Sbjct: 592 VQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNAI 638

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGA 418
             P +V   +  K  +V+CG  HT A
Sbjct: 639 QRPRLVAALQGKKVNRVACGSAHTLA 664



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)

Query: 57  ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 372 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 430

Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 431 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 488

Query: 174 LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 489 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 539

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 540 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 599

Query: 292 --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
              +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 600 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 658

Query: 350 WKHTAAISEGK 360
             HT A S  K
Sbjct: 659 SAHTLAWSTSK 669



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
           G +Y WG N  GQLG G + AKV                                     
Sbjct: 301 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 359

Query: 165 --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                         +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 360 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 419

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 420 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 470

Query: 269 KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
           ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 471 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 530

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
            D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 531 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 577

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           LGHG+D     P  V   +  K + ++ G  H
Sbjct: 578 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 609


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 182/415 (43%), Gaps = 61/415 (14%)

Query: 33  STLQRRFAA-----LWGNGDYGRLGLGSL--------ESRWRPVVCSAFEKHSLKALACG 79
           S LQ  F+       WGNG  G+LG G +             P +  AFE  ++  +  G
Sbjct: 32  SALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFG 91

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAI 138
            +H+  + E G +Y  G N++ +LG+ E+      P  +  LK  ++V +S G + ++A+
Sbjct: 92  ASHSAAIDEDGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAV 151

Query: 139 TVDGELYMW---GKNSNGQLGLGKKAAKVIPIPTKVECL--SGIFTKQAALGFEQSVAVT 193
             DG++Y W   G    G  GLG    K  P P  +  L   G+       G   +VA++
Sbjct: 152 DADGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALS 211

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG G  GRLG+G+         S +   P  I+      V   AAG   S  +
Sbjct: 212 KDGEIWAWGNGEYGRLGNGE---------SDTCEVPEPIEFFSKDNVVSIAAGRDFSFAL 262

Query: 254 DENGRVYIFGDRAVDKMLFQEG------NHARRPSLISKLP-YSEEVVCGGY-HTCVLTS 305
            +NG +Y +G  + +++    G      N    P L+      S + +  GY H   +T 
Sbjct: 263 TDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTD 322

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G LY WGS            +   P  +    +E  + QV+CG ++T A+SE G++ T+
Sbjct: 323 DGRLYMWGSK-----------IWIEPHEMTA-VNEYKMVQVACGRQYTVALSENGEVFTF 370

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G S+             LGHG+  + + P  +    +V    +SCG  H GA+
Sbjct: 371 GKGSSNC------------LGHGDRKNQLQPVQIEALADVNITSISCGDYHMGAI 413



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 162/366 (44%), Gaps = 46/366 (12%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLG----ISENIGYSLEPLRISGLK----KEV 125
           ++LA   A     +    VY  G    GQLG    +   I  + E L    L+    K +
Sbjct: 26  RSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEELTPKLLEAFEGKAI 85

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
             +  G  HS+AI  DG+LY+WG N   +LGLG+ ++++  +P +VE L G+     + G
Sbjct: 86  THVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGE-SSEMETLPREVEALKGVKIVDVSCG 144

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIA 243
              + AV   GK+ SWG GGS      + +  LG      E TPRL+  L  +GV +   
Sbjct: 145 DYFTAAVDADGKMYSWGWGGSTM----KGAGGLGHAGGKDEPTPRLLTTLVDQGVPILTV 200

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
             G  H+  + ++G ++ +G+    ++   E +    P  I          +  G   + 
Sbjct: 201 ECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSF 260

Query: 302 VLTSGGELYTWGSNENGCLGIG---SIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            LT  GELY+WG N    LGIG   ++DV  + S   +   F+   V Q++ G+ H AA+
Sbjct: 261 ALTDNGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAV 320

Query: 357 SE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           ++ G++  WG                          +I P  +      K +QV+CG  +
Sbjct: 321 TDDGRLYMWG-----------------------SKIWIEPHEMTAVNEYKMVQVACGRQY 357

Query: 416 TGALLE 421
           T AL E
Sbjct: 358 TVALSE 363



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 142/331 (42%), Gaps = 42/331 (12%)

Query: 113 LEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP----- 166
           L  LR +G +  V + ++T      A +    +Y WG  + GQLG G      I      
Sbjct: 12  LGALRAAGCRASVARSLATRSALQHAFSTQSSVYTWGNGTLGQLGHGPVVKSGIRNAYEE 71

Query: 167 -IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             P  +E   G        G   S A+   GK+  WG+    +LG G+ S +        
Sbjct: 72  LTPKLLEAFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYSKLGLGESSEM-------- 123

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-----DRAVDKMLFQEGNHARR 280
           E  PR ++ L+GVK+   + G   +A +D +G++Y +G      +    +    G     
Sbjct: 124 ETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGLGHAGGKDEPT 183

Query: 281 PSLISKLPYS----EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P L++ L         V CG +HT  L+  GE++ WG+ E G LG G  D    PE ++ 
Sbjct: 184 PRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEF 243

Query: 337 PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN----DVDY 392
            FS+  V  ++ G   + A+++   L + WGG          +S  QLG G     DV  
Sbjct: 244 -FSKDNVVSIAAGRDFSFALTDNGEL-YSWGG----------NSQNQLGIGGGLAMDVYN 291

Query: 393 IH--PTIVNFGENVKALQVSCGFNHTGALLE 421
           I   P +V     +   Q++ G++H  A+ +
Sbjct: 292 IESIPVLVEAFNGLSVKQIAAGYDHAAAVTD 322


>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
          Length = 5016

 Score =  116 bits (290), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 99/368 (26%), Positives = 156/368 (42%), Gaps = 48/368 (13%)

Query: 27  CKRWISSTLQRRFAAL--WGNGDYGRLGLGSLESRWRPVVCSAFEKH------SLKALAC 78
           C   +++  Q R   L  WG    G LG G++ S   P +   F  H      S+  ++C
Sbjct: 180 CHFSVAAVAQPRGTTLLAWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVSC 239

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGIS--------ENIGYSLEPLR-----------IS 119
           G  H   +T    ++  G N +GQLG+         E + ++L  L            + 
Sbjct: 240 GKHHVAVITGQARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQ 299

Query: 120 GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP----IPTKVECLS 175
                V  ++ G  H+  +T   ++   G N  GQLGLG +  +        P  VE L 
Sbjct: 300 HGGNNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLR 359

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
                    G   S  V   G V +WG G  GRLG G+    LG   +     P L++E 
Sbjct: 360 DQSILDLGAGQNHSACVLSNGDVYTWGCGDDGRLGDGK----LGEGVAVPTLIP-LLRE- 413

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SE 291
             ++ +    G  H A I ++  +YI+G     ++  ++     +P L++  P      E
Sbjct: 414 ASIRARTVRCGARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEGVE 473

Query: 292 EVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
           +V  G +HT  +TS G+ YTWG N  +N  L    +   H+P+ +  P  E  V +VSCG
Sbjct: 474 DVALGEFHTTCVTSAGKAYTWGLNLRDNSAL----VASHHTPQAIDLPEKER-VRKVSCG 528

Query: 350 WKHTAAIS 357
           W HT  ++
Sbjct: 529 WTHTDIVT 536



 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 102/364 (28%), Positives = 146/364 (40%), Gaps = 69/364 (18%)

Query: 94  ATGLNDFGQLG-------------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
           A GLN  G+LG             ++  + +  EPL I+        +S G HH + IT 
Sbjct: 197 AWGLNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIA-------HVSCGKHHVAVITG 249

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIP---------IPTKVECLSGIFTKQ--------AA 183
              L+ WG N  GQLGLG  +++  P         + +    L  + T Q         A
Sbjct: 250 QARLFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVA 309

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   ++ VT   ++L  G   +G+LG G         RS    TP  ++ L    +   
Sbjct: 310 CGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSC---TPITVESLRDQSILDL 366

Query: 244 AAGFLHSACIDENGRVYIFG----DRAVDKMLFQEGNHARRPSLISKLP----YSEEVVC 295
            AG  HSAC+  NG VY +G     R  D  L   G     P+LI  L      +  V C
Sbjct: 367 GAGQNHSACVLSNGDVYTWGCGDDGRLGDGKL---GEGVAVPTLIPLLREASIRARTVRC 423

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP--FSESPVDQVSCGWKHT 353
           G  H  V++    LY WG+N+ G LG         P  +  P  F+E  V+ V+ G  HT
Sbjct: 424 GARHMAVISDSDLLYIWGANDFGQLGCKDRKPRSQPFLLATPPLFAEG-VEDVALGEFHT 482

Query: 354 AAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             + S GK  TWG      +     H +              P  ++  E  +  +VSCG
Sbjct: 483 TCVTSAGKAYTWGLNLRDNSALVASHHT--------------PQAIDLPEKERVRKVSCG 528

Query: 413 FNHT 416
           + HT
Sbjct: 529 WTHT 532



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 58/245 (23%), Positives = 85/245 (34%), Gaps = 66/245 (26%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +VA   G  +L+WG   +G LG+G           TS  TP+++               L
Sbjct: 186 AVAQPRGTTLLAWGLNSNGELGNGT---------MTSSPTPQMVVTFP-----------L 225

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
           H                      FQ     R P  I+       V CG +H  V+T    
Sbjct: 226 H----------------------FQ-----REPLSIA------HVSCGKHHVAVITGQAR 252

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           L+TWGSN+ G LG+G       PE V    +     + +    HT       +     G 
Sbjct: 253 LFTWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTVQHGGNNVTHVACGA 312

Query: 369 SHGTFSED-------GHSSGGQLGHGNDVDYIH------PTIVNFGENVKALQVSCGFNH 415
           +H  F          G++  GQLG G+ +          P  V    +   L +  G NH
Sbjct: 313 AHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKGWRSCTPITVESLRDQSILDLGAGQNH 372

Query: 416 TGALL 420
           +  +L
Sbjct: 373 SACVL 377


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 136/277 (49%), Gaps = 29/277 (10%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLG 104
           G LGLG ++S   P      +  S K +AC     G H +  T  G ++  G N + QLG
Sbjct: 146 GCLGLGDIQSTIEP---RRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLG 202

Query: 105 ISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
            +    + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A 
Sbjct: 203 -NGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN 261

Query: 163 KVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           +  PIP +V  CL        A G   SVAV   G+V  WG  G+G+LG G         
Sbjct: 262 Q--PIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGS-------- 311

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
            S ++ TP  I  L+G+ V+  A G+ H+  + + G+VY++G  +  ++    GN + + 
Sbjct: 312 -SGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQL--GTGNKSNQS 368

Query: 281 ---PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
              P  + K    E   C   HT    T GG +Y WG
Sbjct: 369 YPTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 405



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 100 KWPIFSLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGD-IQSTIE 158

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++   S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 159 PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTNHGLVPCHISTN 218

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 219 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 268

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + +NG VY++G     ++      +   P  I+ L    
Sbjct: 269 TGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRIAALQGIC 328

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 329 VQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPV-AVEKDRIIEIAACH 387

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 388 STHTSAAKTQGGHVYMWG 405



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 96/209 (45%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G ++ +G  A  ++     N
Sbjct: 150 LGDIQSTIE--PRRLDSLSGKKIACFSYGSGPHVILATTEGEIFTWGHNAYSQLGNGTTN 207

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 208 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 267

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A +  G++  WG+ G+            GQLG G+  + 
Sbjct: 268 VTGCLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNGN------------GQLGLGSSGNQ 315

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + +   +V+CG+ HT  L +
Sbjct: 316 STPCRIAALQGICVQRVACGYAHTLVLTD 344



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 128/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A   +      +  T  
Sbjct: 132 TVNDEIFVLGTNCCGCLGLGDIQSTIEP--RRLDSLSG--KKIACFSYGSGPHVILATTE 187

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G++ +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 188 GEIFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 239

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 240 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVYVW 299

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG      
Sbjct: 300 GYNGNGQLGLGSSGNQSTPCRIAA-LQGICVQRVACGYAHTLVLTDEGQVYVWG------ 352

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 353 ------ANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAACHSTHTSA 393



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VY  G N +G
Sbjct: 298 VWGYNGNGQLGLGSSGNQSTPCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANSYG 357

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  ++  K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 358 QLGTGNKSNQSY-PTPVAVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 410

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 411 --SVILPHLTSFSCTDDVF 427


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 154/335 (45%), Gaps = 31/335 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T +G +Y    G ++ 
Sbjct: 101 WGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNI 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG+ +  +V  +S G  H++ +T  G+L+ +G  + G LG G
Sbjct: 161 GLLGNGTDVSHWI-PKRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +     P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 220 NRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V   G+  V
Sbjct: 278 RLGHGDKEPKL---------KPTCVASLIDYDFCRIACGHSLTVGLTTSGQVLSMGN-TV 327

Query: 268 DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P LI  +   +  +V CG YH  VLT+  E++TWG   NG LG G +
Sbjct: 328 YGQLGNPRSDGKLPCLIEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDV 387

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           +    P  V+    +  V  ++CG   T+AI + K
Sbjct: 388 EDRKIPTLVES-LRDRAVRHIACGSNFTSAICQHK 421



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 44/365 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHH 134
           + CG  H   +T+ G V+  G    G+LG       S+ P  +  L    V I + G  H
Sbjct: 82  VDCGVKHAALVTKNGEVFTWGEESGGRLGHGSRED-SVHPRLVESLAICNVDIVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
           + A+T  GELY WG  ++  G LG G   +  IP   ++   L G      + G   +  
Sbjct: 141 TCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIP--KRISGVLEGHQVAYVSCGTWHTAL 198

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           VT  G++ ++G G  G LGHG   S            PR ++ L G+K    A G  H+A
Sbjct: 199 VTSRGQLFTFGDGTFGVLGHGNRESF---------SCPREVESLSGLKTIAVACGVWHTA 249

Query: 252 CIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY 298
            + E           +G+++ +GD    ++   +     +P+ ++ L   +   + CG  
Sbjct: 250 AVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHS 309

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
            T  LT+ G++ + G+   G LG    D    P  ++    E  V QV+CG  H A ++ 
Sbjct: 310 LTVGLTTSGQVLSMGNTVYGQLGNPRSDG-KLPCLIEDIMGEHVV-QVACGSYHVAVLTN 367

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           + ++ TWG G +            G+LGHG+  D   PT+V    +     ++CG N T 
Sbjct: 368 KSEVFTWGKGAN------------GRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTS 415

Query: 418 ALLEY 422
           A+ ++
Sbjct: 416 AICQH 420



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST++    L K LE    + V     G  H+A + +NG V+ +G+ +  ++      
Sbjct: 56  VIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGT-DVSHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G      V  VSCG  HTA + S G++ T+G     GTF        G LGHGN  
Sbjct: 175 KRISGVLEGHQVAYVSCGTWHTALVTSRGQLFTFG----DGTF--------GVLGHGNRE 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            +  P  V     +K + V+CG  HT A++E +
Sbjct: 223 SFSCPREVESLSGLKTIAVACGVWHTAAVVEVI 255


>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
          Length = 408

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 178/405 (43%), Gaps = 57/405 (14%)

Query: 43  WGNGDYGRLGLGSLESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG G  G+LG G  +     +P++     +  +  +A GGAH + LT  G V+  G    
Sbjct: 30  WGAGTDGQLGNGGFDDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTH 89

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           GQLG   N+     P  +  L+   V  +S G++HS   T  G+L+M G  S GQLG G 
Sbjct: 90  GQLG-HGNLDNMPHPKLVKFLENHTVTCVSAGWNHSGFATDSGQLFMCGDGSFGQLGTGD 148

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             ++  P   +V   +    ++ A G   S+ +     V  +G+   G++G         
Sbjct: 149 NLSRNFPF--EVAYFNATHIEKLAFGMRHSLVLLKDNSVYGFGSARRGQVGKCAS----- 201

Query: 220 FLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
             R    Y  PRLI      K+    A   HSA +DE+G +Y++G     + L  + +  
Sbjct: 202 --RIQKSYNVPRLIDGFPNCKIVNIYANGDHSAALDESGHLYVWG-----RALIGQHDDD 254

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG---SNENGCLGIGSIDVLHSPERVQ 335
           +   ++  L  S+  V  G+H  ++ S GELYT G     +    G+G++    S  R  
Sbjct: 255 QPSEILPSLSVSQ--VALGWHHALVLSAGELYTLGVYRHQKCDLPGLGNVLGQQSDTRAT 312

Query: 336 G---------------PFSE-SPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGH 378
                           PF +   V Q++ G +H+A +++ G + TWGWG           
Sbjct: 313 SSSHDCSSSLSVLETVPFLDGEQVAQIASGTEHSALVTDKGTVFTWGWG----------- 361

Query: 379 SSGGQLGHGNDVDYIHPTIVNFGENVKALQ----VSCGFNHTGAL 419
              GQLG G+  D++ P  VN G+N + +     V CG   T A+
Sbjct: 362 -EHGQLGLGDTSDHVAPQRVNVGDNGQGMSGSFAVYCGSGFTVAV 405



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 18/152 (11%)

Query: 274 EGNHARRPSLISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           + +H  +P L+     S    V  GG H   LTS GE++TWG   +G LG G++D +  P
Sbjct: 44  DDHHLPQPLLLPTRCRSRVSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGNLDNMPHP 103

Query: 332 ERVQGPFSES-PVDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           + V+  F E+  V  VS GW H+  A   G++   G     G+F        GQLG G++
Sbjct: 104 KLVK--FLENHTVTCVSAGWNHSGFATDSGQLFMCG----DGSF--------GQLGTGDN 149

Query: 390 VDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           +    P  V +       +++ G  H+  LL+
Sbjct: 150 LSRNFPFEVAYFNATHIEKLAFGMRHSLVLLK 181


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 145/303 (47%), Gaps = 20/303 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 54  IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113

Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P R+      ++  I+T   H++AIT  GELYMWG+           
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  LEGV++   A G  HS  + E G+V  +G     ++     
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHSPE 332
            + + P+ I  L   + V    GG  +  +T GGEL+ WG+ ++  LG+ G  ++  +P 
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPV 342

Query: 333 RVQ 335
            V 
Sbjct: 343 EVN 345



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +++  S  F    + G   S  +T  G +  WG G  GRLG GQE+S+         +
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSV---------F 72

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---AVDKMLFQEGNHARRPSLI 284
            P L    E   ++  A G LHS  +   G V+ +G     A+   ++      RR    
Sbjct: 73  VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDS 132

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGP 337
                S  +   G HT  +T  GELY WG  E                  L  P +V+  
Sbjct: 133 WDCKISA-IATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKA- 190

Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               PV  VSCG   T A++ EG++  W WG +          S  +LG G+++    P 
Sbjct: 191 -LTVPVASVSCGGFFTMALTKEGQL--WNWGAN----------SNYELGRGDNLGGWEPM 237

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V   E V+  Q++CG  H+ AL E
Sbjct: 238 PVPSLEGVRITQIACGGYHSLALTE 262


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 182/412 (44%), Gaps = 55/412 (13%)

Query: 37  RRFAAL-WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R  A L WG+G+ G+LG+G  + + R     A + +++ A+  G  ++L + + G ++  
Sbjct: 6   RPVAVLAWGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTW 65

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  G LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ
Sbjct: 66  GWNQRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQ 125

Query: 155 LGL-------GKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
            G        G +A  + IPIP +  C   +  +Q A G   SV +T  G V +WG    
Sbjct: 126 CGEEPERKEDGTRALRRDIPIPQR--CALKLKVRQVAAGGTHSVVLTQEGHVWTWG---- 179

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
                  +    G +++ S  TP  ++ LE  +V + A G  H+  +  +  ++ +G+  
Sbjct: 180 -------QPWPPGDIKNIS--TPVRVQGLE--QVSMIAVGAFHNLALSVDRILWAWGNNE 228

Query: 267 VDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++   +     +P  +  L      ++  GG+H+  LT  GE+Y WG  E+G LG G 
Sbjct: 229 YGQLGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGD 288

Query: 325 IDVLHS-PERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGG 382
               H  P +VQ    E  V QVSCG  H+  + S+G+I ++G  G H           G
Sbjct: 289 DKSSHMVPLQVQLLAGEDIV-QVSCGGTHSVVLTSDGRIFSYG-RGDH-----------G 335

Query: 383 QLGHGNDVDYIHPTIVNFGENV-----------KALQVSCGFNHTGALLEYV 423
           +LG G  V   HP  V                 +A  V+CG  HT A++ + 
Sbjct: 336 RLGDGRKVTTGHPMEVPINLPPPKTSTSSEGLWQANYVACGGRHTLAIVTWT 387


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 184/438 (42%), Gaps = 85/438 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC-------SAFEKHSL------------KALACGGAHT 83
           WG G YG LG G     + PV         S  +K ++               + G  H+
Sbjct: 205 WGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHS 264

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDG 142
           +  T  G ++  G    G+LG+  N G SL P  +   L +++V ++ G  HS+ I   G
Sbjct: 265 MACTSDGTLWTWGHGGNGRLGLGHNRG-SLSPAVVDYILDRDIVFVNAGDSHSACIDRQG 323

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            LY WG    G+LG G +    IP+P KVE   G+   Q A G   ++A+T  G V +WG
Sbjct: 324 VLYTWGSGGFGRLGHGDQGE--IPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG 381

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           AG +   G G++ S  G + +     P+ + ++E   + I AAG  HSA +   G + ++
Sbjct: 382 AGLALGFGEGEDGS--GGMVA----VPKHLSDIEAAVLNI-AAGPYHSAAVTVGGDLLVW 434

Query: 263 GDRAVDKMLFQEGNHARRPSLISKL--------------------PYSEEVV-------- 294
           G     ++   +  +   P  ++ L                     YS+  V        
Sbjct: 435 GVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSG 494

Query: 295 ------------CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
                       CG  HT  LT  G ++ WGSN++G LG+G        E V+     +P
Sbjct: 495 TNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTP 554

Query: 343 VDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           + +++CG KH  A+++ G +  W            G +  GQLG G       P  V   
Sbjct: 555 IRRIACGSKHCLAVAQYGDVFAW------------GANDNGQLGLGVVRPSFEPAAVTAL 602

Query: 402 ENVKALQVSCGFNHTGAL 419
              +A+ V CG +++  +
Sbjct: 603 R--QAVDVFCGDDYSACI 618



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 157/343 (45%), Gaps = 68/343 (19%)

Query: 42  LWGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG+ D G+LGLG    E ++ PV    F    ++ +ACG  H L + + G V+A G ND
Sbjct: 523 VWGSNDDGQLGLGEDVEEDQYEPVKLECFST-PIRRIACGSKHCLAVAQYGDVFAWGAND 581

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT-------VDGE-------LY 145
            GQLG+   +  S EP  ++ L+ + V +  G  +S+ IT       V GE       L+
Sbjct: 582 NGQLGLGV-VRPSFEPAAVTALR-QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLW 639

Query: 146 MWGKNSNGQLGLGKKAAK---------VIPIPT--------------KVECLSGIFTKQA 182
            WG   +G+LGLG+  A          V  +P               +V C+S  F+   
Sbjct: 640 AWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVS--FSPLC 697

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           + G   S+A+T  G+  +WGAG  GRLG G          + + YTP      +GV+++ 
Sbjct: 698 S-GTSHSLAITAQGECYAWGAGYYGRLGIGT---------TANAYTPTRCDFPKGVRLRS 747

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL------PYSEEVVCG 296
            AAG  HS  +  +G ++ +G R   +      N+   P +  +L      P  + +   
Sbjct: 748 VAAGACHSLALSMDGDLWFWGRR---EDTCSTTNYM-SPRIFMQLEGQGGVPKVKSISAS 803

Query: 297 GYHTCVLTSGGELYTWGSN---ENGCLGIGSIDVLHSPERVQG 336
             H+  +T  GE++ WG N   + GC G    + L  PERV G
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGC-GKRQAERLDRPERVAG 845



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 168/428 (39%), Gaps = 93/428 (21%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI-- 118
           +P      +K  +  ++CG  HTL L++ G +YA G+  +G LG  +    S  P+R+  
Sbjct: 171 KPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDT-SDSYTPVRVYL 229

Query: 119 -----SGLKKEVVQI-------------STGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
                SG KKE V +             S G  HS A T DG L+ WG   NG+LGLG  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              + P          I    A  G   S  +   G + +WG+GG GRLGHG +  I   
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNA--GDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIP-- 345

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH--- 277
                   PR ++   GV V   A G  H+  +   G V+ +G  A   + F EG     
Sbjct: 346 -------VPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWG--AGLALGFGEGEDGSG 396

Query: 278 --ARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWG--------------------- 313
                P  +S +  +   +  G YH+  +T GG+L  WG                     
Sbjct: 397 GMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYV 456

Query: 314 ---------SNENGCLGI-------GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
                    S+    LG+         +DVL  P       S   +  + CG  HT A++
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV--DYIHPTIVN-FGENVKALQVSCGFN 414
            G    W W          G +  GQLG G DV  D   P  +  F   ++  +++CG  
Sbjct: 517 -GAGAVWVW----------GSNDDGQLGLGEDVEEDQYEPVKLECFSTPIR--RIACGSK 563

Query: 415 HTGALLEY 422
           H  A+ +Y
Sbjct: 564 HCLAVAQY 571



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 187/455 (41%), Gaps = 102/455 (22%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN---D 99
           WG+G +GRLG G       P     F    +  +ACG  HTL LT  G V+A G      
Sbjct: 328 WGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG 387

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+ G   + G    P  +S ++  V+ I+ G +HS+A+TV G+L +WG   + +LG G 
Sbjct: 388 FGE-GEDGSGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD 446

Query: 160 KAAKVIPIPTKVECLSG---IFTKQAALGFEQ---------------------------- 188
           +  +  P P  V  L     +   Q+ LG  +                            
Sbjct: 447 QQNQ--PFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQS 504

Query: 189 -------SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
                  ++A+TG G V  WG+   G+LG G++           +Y P  + E     ++
Sbjct: 505 LECGESHTIALTGAGAVWVWGSNDDGQLGLGEDV-------EEDQYEPVKL-ECFSTPIR 556

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCG-GYHT 300
             A G  H   + + G V+ +G     ++       +  P+ ++ L  + +V CG  Y  
Sbjct: 557 RIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVDVFCGDDYSA 616

Query: 301 CVLTSG-------------GELYTWGSNENGCLGIGSIDV----LHSPERV--QGPFSES 341
           C+ + G             G+L+ WG+ E+G LG+G  DV    + +P++V    P    
Sbjct: 617 CITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGE-DVASGSILTPQKVVFSVPVCAC 675

Query: 342 PVD--------QVSC--------GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQL 384
            +D        +V C        G  H+ AI+ +G+   WG G              G+L
Sbjct: 676 SLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAG------------YYGRL 723

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G G   +   PT  +F + V+   V+ G  H+ AL
Sbjct: 724 GIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 155/375 (41%), Gaps = 44/375 (11%)

Query: 68  FEKHSLKALACGGAHTLFLTETG---CVYATGLNDFGQLGISENIGYSLEPLRISGLKKE 124
           F   S+K +A G  HTL +   G    ++  G N    LG+   I   + P  +    K 
Sbjct: 43  FGPASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKM 102

Query: 125 -VVQISTGYHHSSAITVD-----GELYMWGKNSNGQLGLGKKAAKVI------------- 165
              ++S G ++S+ +        G++Y +G  + G+LG  K  A  +             
Sbjct: 103 GTFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQE 162

Query: 166 -------PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P P++V         + + G + ++A++  G + +WG G  G LG G  S   
Sbjct: 163 DGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSY 222

Query: 219 GFLRST--SEYTPRLIKELEGV--------KVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
             +R    SE      KE  GV         V   +AG  HS     +G ++ +G     
Sbjct: 223 TPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNG 282

Query: 269 KMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++       +  P+++  +   + V    G  H+  +   G LYTWGS   G LG G   
Sbjct: 283 RLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQG 342

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 385
            +  P +V+G F   PV QV+CG  HT A++ +G +  WG G + G F E    SGG + 
Sbjct: 343 EIPVPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALG-FGEGEDGSGGMVA 400

Query: 386 HGNDVDYIHPTIVNF 400
               +  I   ++N 
Sbjct: 401 VPKHLSDIEAAVLNI 415



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 1/170 (0%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YGRLG+G+  + + P  C   +   L+++A G  H+L L+  G ++  G  +   
Sbjct: 715 WGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTC 774

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
              +         L   G   +V  IS    HS A+T  GE++ WG N   Q G GK+ A
Sbjct: 775 STTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQA 834

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           + +  P +V  L     +  A G + S  +   G+V + G   SGRLG G
Sbjct: 835 ERLDRPERVAGLPSA-CQWVATGPQGSFFILASGEVFAAGVIKSGRLGTG 883



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 39/158 (24%)

Query: 291 EEVVCGGYHTCVLTSGGE---LYTWGSNENGCLGIGSIDVLHSPERV----QGPFSESPV 343
           + V  G YHT V+   G+   L+ WG N +  LG+G    +   ERV       FS+   
Sbjct: 49  KRVALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMG----VEIRERVFPGLVPFFSKMGT 104

Query: 344 DQVSCGWKHTAAISE------GKILTWGWG----------------GSHGTFSEDGHSSG 381
            +VSCG  ++A + +      GK+ T+G G                G  G FS DG   G
Sbjct: 105 FEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDG 164

Query: 382 GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                        P+ V F +  K  ++SCG +HT AL
Sbjct: 165 PSWFTPK------PSRVRFRDKCKIARISCGADHTLAL 196


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 321 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 208

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 209 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 255

Query: 417 GALLEYV 423
             L E V
Sbjct: 256 VVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 154/325 (47%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +      + V IS G  H++ +T +G+LYM+G N  GQLGLG 
Sbjct: 21  FGKSNFAENI-----PSKFWFKNDKPVHISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGS 75

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K    +  PT V+ L    TK A  G   ++  T  G V + G    G+LG G       
Sbjct: 76  K--NTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTT 133

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F    S +T +        K+K  AAG   SA + E+G+++++GD +  ++   +     
Sbjct: 134 F-HLISFFTNQH-------KIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVS 185

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGP 337
            P  +        + CG YH+  +T  GELYT+G  ENG LG+    + +S  P+ V G 
Sbjct: 186 VPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGI 245

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PT 396
             +  V++V+CG +HT  ++E  + T+G G              GQLGHG  +     P 
Sbjct: 246 MEK--VNKVACGGEHTVVLTETGVYTFGLG------------QYGQLGHGTLLFKTSVPK 291

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V    + K   V+CG +HT  + E
Sbjct: 292 SVKHLRSHKIHNVTCGESHTAVIAE 316



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 27/291 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ D+G+LGLGS  +  +P    A +    K   CG  HTL  TE G VYA G N  G
Sbjct: 62  MFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEKGNVYAAGGNSEG 121

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q++ G + S+A+T DG+L++WG NS GQ+GL 
Sbjct: 122 QLGLGDTEERTTFHL--ISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLA 179

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    +P    V    G      + G+  S  +TG G++ ++G   +G+LG   E    
Sbjct: 180 DKTCVSVPCQVDV----GKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQ--- 232

Query: 219 GFLRSTSEYTPRL-IKELEGVKVKIAAAGFLHSACIDENGRVYIF-----GDRAVDKMLF 272
             L+++    P L I E    KV   A G  H+  + E G VY F     G      +LF
Sbjct: 233 --LKNSRVPQPVLGIME----KVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLF 285

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           +         L S   ++  V CG  HT V+   G ++T+G   +G LG+G
Sbjct: 286 KTSVPKSVKHLRSHKIHN--VTCGESHTAVIAENGLMFTFGDGRHGKLGLG 334



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 163/351 (46%), Gaps = 41/351 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQIST-GYH 133
           ++CG  HT  +T  G +Y  G ND+GQLG+ S+N     +P  +  LK E  +++  G +
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNT--VRKPTCVKALKPEKTKLAVCGRN 101

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQ 188
           H+   T  G +Y  G NS GQLGLG    +     T    +S  FT     KQ A G   
Sbjct: 102 HTLVYTEKGNVYAAGGNSEGQLGLGDTEER-----TTFHLIS-FFTNQHKIKQLAAGSYT 155

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S AVT  G++  WG    G++G   ++ +           P  +    G  V   + G+ 
Sbjct: 156 SAAVTEDGQLFVWGDNSEGQIGLADKTCV---------SVPCQVD--VGKPVSSISCGYY 204

Query: 249 HSACIDENGRVYIFGDRAVDK--MLFQEGNHARRPS-LISKLPYSEEVVCGGYHTCVLTS 305
           HSA I  +G +Y FG+    K  +L ++  ++R P  ++  +    +V CGG HT VLT 
Sbjct: 205 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTE 264

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G +YT+G  + G LG G++    S  +         +  V+CG  HTA I+E G + T+
Sbjct: 265 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTF 323

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           G  G HG            LG  N  +   P + +   +   L V+CG  H
Sbjct: 324 G-DGRHGKLG---------LGEENFANQFDPALCSNFLSFTVLLVACGGCH 364



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 43  WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G G YG+LG G+L  +   P        H +  + CG +HT  + E G ++  G    G
Sbjct: 270 FGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHG 329

Query: 102 QLGI-SENIGYSLEP 115
           +LG+  EN     +P
Sbjct: 330 KLGLGEENFANQFDP 344



 Score = 38.1 bits (87), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F   ++  +ACGG H L  
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVF 368


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 166/340 (48%), Gaps = 37/340 (10%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + +TG V+      FG+   +ENI     P +        + +S G  H++ +T + +L
Sbjct: 7   LVPDTGAVFT-----FGKTKFAENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGN 114

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD
Sbjct: 115 NEGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGD 166

Query: 265 RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ +
Sbjct: 167 NSEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPN 226

Query: 325 IDVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGG 382
             +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              G
Sbjct: 227 ELLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFG 272

Query: 383 QLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           QLG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 273 QLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 312



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 158/322 (49%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 28  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKAAIIKPTCIKALK 85

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+TG VYA G N+ GQLG+ +     +   +        + Q+
Sbjct: 86  PEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQL 145

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 146 SAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIP----HEVTVGKPISWISCGYYH 201

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   E  +L   RS     P+ +  +    +++A  G  
Sbjct: 202 SAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRS-----PQRVLGIPERVIQVACGGG- 253

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  + E   VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 254 HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE----TSEPKIIERIKDQKICHISCGENHTA 308

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G LYT+G   +G LG+G
Sbjct: 309 LMTELGLLYTFGDGRHGKLGLG 330



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 158/347 (45%), Gaps = 39/347 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+       ++P  I  LK E V+++  G +H
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSV 190
           +   T  G +Y  G N+ GQLGLG    +     I   T  + +     KQ + G   S 
Sbjct: 99  TLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSA 153

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+T  GK+  WG    G++G   +S++           P  +    G  +   + G+ HS
Sbjct: 154 ALTEDGKLFMWGDNSEGQIGLEDKSNVC---------IPHEV--TVGKPISWISCGYYHS 202

Query: 251 ACIDENGRVYIFGDRAVDKM-LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSG 306
           A +  +G +Y FG+    K+ L  E   NH R P  +  +P    +V CGG HT VLT  
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEK 261

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
             +Y +G  + G LG+G+     S  ++     +  +  +SCG  HTA ++E G + T+G
Sbjct: 262 V-VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG 320

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
             G HG            LG  N  +   PT+ +         ++CG
Sbjct: 321 -DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 112/247 (45%), Gaps = 35/247 (14%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +++I+          P  IK L+  KVK+AA
Sbjct: 43  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYH 299
            G  H+    + G VY  G     ++    G+   R +    + ++     +++  G   
Sbjct: 94  CGRNHTLVSTDTGGVYAAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANT 151

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-E 358
           +  LT  G+L+ WG N  G +G+     +  P  V       P+  +SCG+ H+A ++ +
Sbjct: 152 SAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMD 208

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHT 416
           G++ T+G                G+LG  N++   H  P  V  G   + +QV+CG  HT
Sbjct: 209 GELYTFG------------EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHT 255

Query: 417 GALLEYV 423
             L E V
Sbjct: 256 VVLTEKV 262



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 364


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 180/398 (45%), Gaps = 37/398 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G+ G+LGLG+ E +    V  A E  +++++  G  ++L + + G ++  G N  G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG----- 156
           LG          P  +  L   ++VQ + G  H  A+   G  Y WG N  GQ G     
Sbjct: 70  LGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSK 129

Query: 157 --LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
              G+   + I IP +  C   +  +Q A G   SV +T  G V +WG           +
Sbjct: 130 DETGRPVRRDIVIPKR--CAPQLTVRQVAAGGTHSVVLTREGYVWTWG-----------Q 176

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
               G ++  S   P  ++ LE   V++ A G  H+  + E+G ++ +G+    ++   +
Sbjct: 177 PWPPGDIKQIS--IPVRVQGLE--NVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGD 232

Query: 275 GNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-- 330
                 P  +  L      ++  GG+H+  LT+ GE+Y WG  E+G LG G  D      
Sbjct: 233 TQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKML 292

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQ-LGHGN 388
           P++V     E  + QVSCG  H+ A++ +G+I ++G  G HG        + GQ L    
Sbjct: 293 PQKVNLLAGEDII-QVSCGGTHSVALTRDGRIFSFG-RGDHGRLGYGRKVTTGQPLELPI 350

Query: 389 DVDYIHPTIVNFGENVK----ALQVSCGFNHTGALLEY 422
           D+  +     +  E       A  V+CG  HT A++E+
Sbjct: 351 DIPPLEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEW 388



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 132/328 (40%), Gaps = 17/328 (5%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           V A G  + GQLG+  +    L  +  +     V  +  G  +S AI  DG+L+ WG N 
Sbjct: 7   VIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQ 66

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            G LG      K    P+ V+ L+ +   QAA+G    +AV   G+  +WG    G+ G 
Sbjct: 67  RGTLGH-PPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGE 125

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                  G         P+       + V+  AAG  HS  +   G V+ +G       +
Sbjct: 126 EPSKDETGRPVRRDIVIPKRCAPQ--LTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDI 183

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            Q       P  +  L     +  G +H   L   G L+ WG+NE G LG G       P
Sbjct: 184 KQ----ISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFP 239

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             VQG    + VD  + GW  TA  +EG++  WG  G HG             G  +   
Sbjct: 240 IPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWG-RGEHGRLG---------FGDNDKSS 289

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + P  VN       +QVSCG  H+ AL
Sbjct: 290 KMLPQKVNLLAGEDIIQVSCGGTHSVAL 317


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  H+  +T  G +Y    G+++ 
Sbjct: 302 WGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMHNA 361

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   N+ + + P RI+G  +  ++  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 362 GLLGHGSNVSHWI-PKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHG 420

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + +  P +VE L G+ T   A G   + AV              GK+ +WG G   
Sbjct: 421 DR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKN 478

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +GRV+  G   V
Sbjct: 479 RLGHGDKEARL---------KPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGS-TV 528

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+  K+     EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 529 YGQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+   +P  V+    +  V  ++CG  ++AAI
Sbjct: 589 IEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 619



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 171/365 (46%), Gaps = 49/365 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G+LG  + +N+   ++P  +  L    +  ++ G 
Sbjct: 283 IACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNV---VQPRLVEALISTTIDFVACGE 339

Query: 133 HHSSAITVDGELYMWGK--NSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQ 188
            HS A+T+ GELY WG   ++ G LG G   +  IP  I   +E L   F    A G   
Sbjct: 340 FHSCAVTMAGELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFV---ACGPWH 396

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  +T  G++ ++G G  G LGHG   ++           PR ++ L G++    A G  
Sbjct: 397 TALITSTGQLFTFGDGTFGVLGHGDRQNV---------SYPREVESLLGLRTIAVACGVW 447

Query: 249 HSACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
           H+A + E           +G+++ +GD   +++   +     +P+ +S L  Y+  ++ C
Sbjct: 448 HTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIAC 507

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G   T  LT+ G ++T GS   G LG  S+     P  V    +   +++++CG  H A 
Sbjct: 508 GHSLTVGLTTSGRVFTMGSTVYGQLG-SSLSDGKVPCLVGDKIAGESIEEIACGAYHVAV 566

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + S+ ++ TWG G +            G+LGHG+  D   P +V   ++     ++CG N
Sbjct: 567 LTSKNEVYTWGKGAN------------GRLGHGDIEDRKTPALVEALKDRHVKYIACGSN 614

Query: 415 HTGAL 419
           ++ A+
Sbjct: 615 YSAAI 619



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 151/352 (42%), Gaps = 62/352 (17%)

Query: 105 ISENIGYSLEP--LRISGLKKEVVQISTGY------HHSSAITVDG--ELYMWGKNS--N 152
           ISE    S +P  +++ G   +V ++S         H S+    D   ++Y+WG+ +  N
Sbjct: 189 ISERSHASPDPTNMQVKGSASDVFRVSVSSAPSTSSHGSAPDDYDALWDVYIWGEVTCEN 248

Query: 153 GQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            ++G  K      P     +P  +E    +     A G   +  VT  G+V +WG    G
Sbjct: 249 VKVGADKNVNYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQGEVFTWGEESGG 308

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG   +++          PRL++ L    +   A G  HS  +   G +Y +GD   
Sbjct: 309 RLGHGVGKNVV---------QPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDGMH 359

Query: 268 DKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +  L   G++     P  I+      ++ +   V CG +HT ++TS G+L+T+G    G 
Sbjct: 360 NAGLLGHGSNVSHWIPKRIAGPLEGLQIAF---VACGPWHTALITSTGQLFTFGDGTFGV 416

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA------------ISEGKILTWGWG 367
           LG G    +  P  V+       +  V+CG  HTAA            IS GK+ TWG G
Sbjct: 417 LGHGDRQNVSYPREVESLLGLRTI-AVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDG 475

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             +            +LGHG+    + PT V+   +    +++CG + T  L
Sbjct: 476 DKN------------RLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGL 515



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 113/232 (48%), Gaps = 19/232 (8%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V  WG      +  G + ++  F        PR ++    + V   A G  H++ +   G
Sbjct: 238 VYIWGEVTCENVKVGADKNVNYFSPRADVLLPRPLESNVVLDVHHIACGVRHASLVTRQG 297

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS- 314
            V+ +G+ +  ++    G +  +P L+  L  +  + V CG +H+C +T  GELYTWG  
Sbjct: 298 EVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGELYTWGDG 357

Query: 315 -NENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHG 371
            +  G LG GS +V H  P+R+ GP     +  V+CG  HTA I S G++ T+G     G
Sbjct: 358 MHNAGLLGHGS-NVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFG----DG 412

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           TF        G LGHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 413 TF--------GVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVI 456


>gi|262193493|ref|YP_003264702.1| alpha-tubulin suppressor and related RCC1 domain- containing
           protein-like protein [Haliangium ochraceum DSM 14365]
 gi|262076840|gb|ACY12809.1| Alpha-tubulin suppressor and related RCC1 domain- containing
           protein-like protein [Haliangium ochraceum DSM 14365]
          Length = 817

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 166/382 (43%), Gaps = 47/382 (12%)

Query: 43  WGNGDYGRLGLGSLE-----SRWRPVVCSAFE-KHSLKALACGGAHTLFLTETGCVYATG 96
           WG   YG+LG G+L+     +   P            + L  G  HT  L E+G +Y  G
Sbjct: 443 WGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPARQLVAGYDHTCALLESGLIYCWG 502

Query: 97  LNDFGQLGIS--ENIGYSLEPLRISG---LKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            N+FGQLG +  +N+G   EP+  +G   L     +I+ G +H+ AI   G L  WG+N+
Sbjct: 503 KNNFGQLGYNRDDNVGDG-EPVTSAGYVTLGGLATKIAAGGNHTCAILEGGFLRCWGENT 561

Query: 152 NGQLGLGKKAA----KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
            GQLGLG        + +     VE   G+  +  ALGF  + A+  GG +  WG  G G
Sbjct: 562 YGQLGLGHSNPIGDNENVFAAGNVELGDGVVVEDIALGFSHTCALLAGGGMRCWGYNGHG 621

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           +LG+G + +    L        +    + G   KI A G  H+  + +N ++  +GD   
Sbjct: 622 QLGYGHDDN----LGDNESLETQGNVAVPGPVRKIVAGG-QHTCALLQNNKLRCWGDGGD 676

Query: 268 DKMLFQEGN-----HARRPSLISKLPYSE--------EVVCGGYHTCVLTSGGELYTWGS 314
            +  + E N     +   P  +      +        +VV GG HTC L S G L  WG+
Sbjct: 677 GRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGGAHTCALLSNGALKCWGT 736

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
             NG LG        +P  +          Q++ G +HT A+ S G    WG G S    
Sbjct: 737 GSNGRLGYSDTGNRGTPPALGVDLDGVSAYQIAAGEEHTCALRSNGTARCWGRGLS---- 792

Query: 374 SEDGHSSGGQLGHGNDVDYIHP 395
                   G+LG G++ D + P
Sbjct: 793 --------GRLGSGSEADILSP 806



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 157/380 (41%), Gaps = 55/380 (14%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGIS--ENIGYSLEPLRISG----LKKEVV 126
           L+ +  G AHT  LT  G V   G N +GQLG    ++IG +   L  +     L +   
Sbjct: 421 LRRIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPAR 480

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK--KAAKVIPIPTK-VECLSGIFTKQAA 183
           Q+  GY H+ A+   G +Y WGKN+ GQLG  +        P+ +     L G+ TK AA
Sbjct: 481 QLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYVTLGGLATKIAA 540

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G   + A+  GG +  WG    G+LG G  + I     + + +    ++  +GV V+  
Sbjct: 541 -GGNHTCAILEGGFLRCWGENTYGQLGLGHSNPI---GDNENVFAAGNVELGDGVVVEDI 596

Query: 244 AAGFLHSACIDENGRVYIFG------------DRAVDKMLFQEGNHARRPSLISKLPYSE 291
           A GF H+  +   G +  +G            D   D    +   +   P  + K     
Sbjct: 597 ALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPVRK----- 651

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP------ERVQGPFSE----S 341
            +V GG HTC L    +L  WG   +G  G G  +  +        E   G   +    +
Sbjct: 652 -IVAGGQHTCALLQNNKLRCWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGA 710

Query: 342 PVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V  V  G  HT A +S G +  WG G            S G+LG+ +  +   P  +  
Sbjct: 711 DVTDVVAGGAHTCALLSNGALKCWGTG------------SNGRLGYSDTGNRGTPPALGV 758

Query: 401 G-ENVKALQVSCGFNHTGAL 419
             + V A Q++ G  HT AL
Sbjct: 759 DLDGVSAYQIAAGEEHTCAL 778



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 138/325 (42%), Gaps = 52/325 (16%)

Query: 127 QISTGYHHSSAITVDGELYMWGKNSNGQLGLGK------------KAAKVIPIPTKVECL 174
           +I  G  H+  +T +G++  WG+N  GQLG G               A  +P+P      
Sbjct: 423 RIVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPA--- 479

Query: 175 SGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI-LGFLRSTSEYTPRLIK 233
                +Q   G++ + A+   G +  WG    G+LG+ ++ ++  G   +++ Y      
Sbjct: 480 -----RQLVAGYDHTCALLESGLIYCWGKNNFGQLGYNRDDNVGDGEPVTSAGYV----- 529

Query: 234 ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-------------LFQEGNHARR 280
            L G+  KIAA G  H+  I E G +  +G+    ++             +F  GN    
Sbjct: 530 TLGGLATKIAAGGN-HTCAILEGGFLRCWGENTYGQLGLGHSNPIGDNENVFAAGNVELG 588

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE--RVQGPF 338
             ++      E++  G  HTC L +GG +  WG N +G LG G  D L   E    QG  
Sbjct: 589 DGVV-----VEDIALGFSHTCALLAGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNV 643

Query: 339 S-ESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHP 395
           +   PV ++  G +HT A +   K+  WG GG   T    G  +G    +G+D  +  + 
Sbjct: 644 AVPGPVRKIVAGGQHTCALLQNNKLRCWGDGGDGRTGY--GERNGTNPAYGDDPGELPNG 701

Query: 396 TIVNFGENVKALQVSCGFNHTGALL 420
           ++ +         V  G  HT ALL
Sbjct: 702 SLDDIDTGADVTDVVAGGAHTCALL 726



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 125/327 (38%), Gaps = 69/327 (21%)

Query: 20  LGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG 79
           L +K+        + L+  F   WG   YG+LGLG                         
Sbjct: 534 LATKIAAGGNHTCAILEGGFLRCWGENTYGQLGLG------------------------- 568

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT 139
             H+  + +   V+A G  + G   + E+                   I+ G+ H+ A+ 
Sbjct: 569 --HSNPIGDNENVFAAGNVELGDGVVVED-------------------IALGFSHTCALL 607

Query: 140 VDGELYMWGKNSNGQLGLGK----------KAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
             G +  WG N +GQLG G           +    + +P  V        ++   G + +
Sbjct: 608 AGGGMRCWGYNGHGQLGYGHDDNLGDNESLETQGNVAVPGPV--------RKIVAGGQHT 659

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQES-SILGFLRSTSEYTPRLIKELE-GVKVKIAAAGF 247
            A+    K+  WG GG GR G+G+ + +   +     E     + +++ G  V    AG 
Sbjct: 660 CALLQNNKLRCWGDGGDGRTGYGERNGTNPAYGDDPGELPNGSLDDIDTGADVTDVVAGG 719

Query: 248 LHSACIDENGRVYIFGDRAVDKMLFQE-GNHARRPSLISKLP--YSEEVVCGGYHTCVLT 304
            H+  +  NG +  +G  +  ++ + + GN    P+L   L    + ++  G  HTC L 
Sbjct: 720 AHTCALLSNGALKCWGTGSNGRLGYSDTGNRGTPPALGVDLDGVSAYQIAAGEEHTCALR 779

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSP 331
           S G    WG   +G LG GS   + SP
Sbjct: 780 SNGTARCWGRGLSGRLGSGSEADILSP 806



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 14/135 (10%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVL-----HSPERVQGPFSESPVDQVS 347
           +V G  HTCVLT  G++  WG N+ G LG G++  +     H P          P  Q+ 
Sbjct: 424 IVAGSAHTCVLTGEGKVRCWGENQYGQLGYGNLQDIGGAATHLPYTAGDVPLPEPARQLV 483

Query: 348 CGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
            G+ HT A+ E G I  WG       F + G++    +G G  V       V  G    A
Sbjct: 484 AGYDHTCALLESGLIYCWG----KNNFGQLGYNRDDNVGDGEPV--TSAGYVTLGG--LA 535

Query: 407 LQVSCGFNHTGALLE 421
            +++ G NHT A+LE
Sbjct: 536 TKIAAGGNHTCAILE 550


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 143/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G          + ++
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLG---------NNVNQ 221

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 222 LTP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NVNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PTHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T D E++++G N +  LG G   + + P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + PT +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPTHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L         TP+ ++ L G K+K  + G 
Sbjct: 33  EALYVTEDDEVFVFGLNYSNCLGTGDNQSTL---------TPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+ + G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+V+ + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNVNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPTHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T + C   +F
Sbjct: 317 -SVVLPHLTHLSCTDDVF 333


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 156/364 (42%), Gaps = 21/364 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG   YG+LGLG   +   P     +     + +++++  G +H+  + E G VY  G  
Sbjct: 4   WGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGRG 63

Query: 99  DFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
             GQLG        LEP  +  ++      ++ G +H+  +T +G +Y WG+N  GQLG 
Sbjct: 64  WEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGT 123

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G   +   P+      L+       A G   +VA+   G + SWG    G+LGHG   + 
Sbjct: 124 GDLKSSNSPVLID-SALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTC 182

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    Y P  +  +       AA G  H+  + +  ++Y +G  A  ++     + 
Sbjct: 183 ---------YFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDK 233

Query: 278 A-RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
           A  +P ++  L  S    V+CG  H+  L    ++YTWG N+ G LG+G       PE V
Sbjct: 234 AVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELV 293

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                   V Q++CG+ H  A    ++   G       +S  G    GQLGH   +    
Sbjct: 294 TA-LRSVRVQQIACGYDHCVAFVADEVEP-GMPPLEHVYSW-GRGEEGQLGHNELLSRCT 350

Query: 395 PTIV 398
           P IV
Sbjct: 351 PRIV 354



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 134/287 (46%), Gaps = 32/287 (11%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA----LGFEQSVAVTGGGKVL 199
           +Y WGKN  GQLGLG      +P+PT +  LS    ++       G   S  +   G V 
Sbjct: 1   VYSWGKNKYGQLGLGH--TNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVY 58

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           +WG G  G+LGH   + I        E  P ++ ++E       A G  H+  + +NG +
Sbjct: 59  TWGRGWEGQLGHDVVTEI--------ELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLI 110

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           Y +G+    ++   +   +  P LI     LP    + CG +HT  +   G +++WG N+
Sbjct: 111 YTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSE 375
            G LG G+    + P +V G  ++    + +CG +HT  +++  KI  W           
Sbjct: 171 CGQLGHGNTKTCYFPTQVVG-MAKKICIRAACGGQHTLVLTDANKIYAW----------- 218

Query: 376 DGHSSGGQLG-HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G ++ GQLG + +D   + P IV+      A  V CG++H+ AL++
Sbjct: 219 -GSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMK 264



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 147/337 (43%), Gaps = 30/337 (8%)

Query: 92  VYATGLNDFGQLGI--SENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMW 147
           VY+ G N +GQLG+  + N+      L +S    +K V  I  G  HS+ I  DG++Y W
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+   GQLG      ++   P  V  +    +   A G   +V VT  G + +WG   +G
Sbjct: 61  GRGWEGQLG-HDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAG 119

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           +LG G        L+S++  +P LI   L    V   A G  H+  I   G ++ +G   
Sbjct: 120 QLGTGD-------LKSSN--SPVLIDSALNLPSVLSIACGEFHTVAICIEGTIWSWGRNQ 170

Query: 267 VDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
             ++          P+ +  +         CGG HT VLT   ++Y WGSN  G LG+  
Sbjct: 171 CGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNR 230

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG-KILTWGWGGSHGTFSEDGHSSGGQ 383
            D       +      S    V CG+ H+ A+ +  +I TW            G +  GQ
Sbjct: 231 SDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTW------------GRNDCGQ 278

Query: 384 LGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           LG G+      P +V    +V+  Q++CG++H  A +
Sbjct: 279 LGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFV 315



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 21/201 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+ ++ + P       K      ACGG HTL LT+   +YA G N +GQ
Sbjct: 166 WGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQ 225

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG++ +    L+P  +  L++     +  GY HS A+  + ++Y WG+N  GQLGLG   
Sbjct: 226 LGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLGLGHYT 285

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG---------GKVLSWGAGGSGRLGHG 212
               P+P  V  L  +  +Q A G++  VA               V SWG G  G+LGH 
Sbjct: 286 HS--PVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHN 343

Query: 213 QESSILGFLRSTSEYTPRLIK 233
           +           S  TPR+++
Sbjct: 344 E---------LLSRCTPRIVE 355


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 166/357 (46%), Gaps = 49/357 (13%)

Query: 92  VYATGLNDFG---QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMW 147
           V+A G+ D G   ++G        + P+ + GL    V Q+  G  H++ +T  GE++ W
Sbjct: 236 VFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTW 295

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G+   G+LG G +    +  P ++E L GI   Q A GF  + AVT  G++ +WGAG +G
Sbjct: 296 GRGGFGRLGHGNREG--LESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENG 353

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLG G  +           +TP  ++ L   KVK   AG +HS  +   G VY FG    
Sbjct: 354 RLGLGDVA---------DRHTPSRVEGLHS-KVKEVYAGSVHSCVLTREGTVYAFGKHEY 403

Query: 268 DKMLFQEGNHAR--RPSLIS-------KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
                  G+H     P LI         L     V  GGYHT  LT  G++Y WG N   
Sbjct: 404 TG----HGDHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVA 459

Query: 319 CLGIGSIDVLHSPERVQGP-FSESP----------VDQVSCGWKHTAAIS-EGKILTWG- 365
            LGIG  +    P  ++G  F  SP          + +V  GW H+AA++ +G++   G 
Sbjct: 460 QLGIG--NSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGR 517

Query: 366 -WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            + G  G  S  G     + GH    D+    +++  +++K  Q++CG  H+ A+ E
Sbjct: 518 NYQGQLGLGSPQGFPQ-NERGHPFQADFC---LIDRLQHLKIKQIACGGEHSVAVAE 570



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 157/333 (47%), Gaps = 18/333 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G +GRLG G+ E    P    A E      +ACG A+T  +T +G +Y  G  + G+
Sbjct: 295 WGRGGFGRLGHGNREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGR 354

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG+  ++     P R+ GL  +V ++  G  HS  +T +G +Y +GK+     G  +   
Sbjct: 355 LGLG-DVADRHTPSRVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHGDHEDVL 413

Query: 163 KVIPIPTKVECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               IPT     SG   +Q ++G     ++A+T  G+V +WG     +LG G   ++   
Sbjct: 414 DPRLIPT-FSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRN 472

Query: 221 LRSTSEY-TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF------- 272
           +       +P+L++ L G+ +    AG+ HSA +  +G++Y+ G     ++         
Sbjct: 473 MEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGLGSPQGFP 532

Query: 273 -QEGNHARRPS--LISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
             E  H  +    LI +L +   +++ CGG H+  +   GE++++G+ + G LG  S   
Sbjct: 533 QNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTR 592

Query: 328 LHSPERVQG-PFSESPVDQVSCGWKHTAAISEG 359
              P  VQ    +   +  V+CG   T  ++ G
Sbjct: 593 EDFPRLVQALKSTRREIMHVACGNNCTLVLAGG 625


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 162/377 (42%), Gaps = 45/377 (11%)

Query: 83  TLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVD 141
           T+F   TG     G   F + GI  +    L P  +   + K + ++  G  HS+AI  +
Sbjct: 6   TVFTWGTGTQGQLGHGSFEKTGIRSSY-EELSPRILETFEGKNIAKLDFGATHSAAIDKE 64

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G+LY WG N   QLG G     +  IP  V+ L GI     + G   + AV   GK+ +W
Sbjct: 65  GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTW 124

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRV 259
           G GGS   G G     LG      E  PRL++ L  +GV VK    G LH+  + ++G +
Sbjct: 125 GWGGSTMKGSGA----LGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI 180

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
           + +G+    ++     ++   P  +          +  G   T  +T  GE+Y+WG N +
Sbjct: 181 WAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSH 240

Query: 318 GCLGIG---SIDV--LHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG---WGG 368
             LG+G   ++D   + +   V    S   V QVS G+ H AA++ +GK+  WG   W  
Sbjct: 241 SQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWGAKLWLE 300

Query: 369 SH---------------GTFSEDGHSSGGQ-----------LGHGNDVDYIHPTIVNFGE 402
            H               G +     S+ G            LGHG     + P +V    
Sbjct: 301 PHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLN 360

Query: 403 NVKALQVSCGFNHTGAL 419
               + ++CG++H GAL
Sbjct: 361 RYNVVSMTCGYSHMGAL 377



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 137/302 (45%), Gaps = 38/302 (12%)

Query: 138 ITVDGELYMWGKNSNGQLGLGK------KAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           ++    ++ WG  + GQLG G       +++     P  +E   G    +   G   S A
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +   GK+ +WG+    +LGHG  +  +       +  PR++  L G+K+   + G  H+ 
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDI-------QSIPRVVDALRGIKIVDISCGEYHTG 113

Query: 252 CIDENGRVYIFG-----DRAVDKMLFQEGNHARRPSLISKLPYS----EEVVCGGYHTCV 302
            +DE G+++ +G      +    +    G     P L+  L       + V CG  HT  
Sbjct: 114 AVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVA 173

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKI 361
           LT  GE++ WG+ E G LG G+ D    PE V+  F++  +  +S G   T AI+E G++
Sbjct: 174 LTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVE-YFADENIASISAGRDFTFAITEHGEV 232

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH----PTIVNFGENVKALQVSCGFNHTG 417
            +WG          + HS  G LG G  VDY +    P +V    NV   QVS G++H  
Sbjct: 233 YSWGI---------NSHSQLG-LGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAA 282

Query: 418 AL 419
           A+
Sbjct: 283 AV 284



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 28/217 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGNG+YGRLG G+ ++   P     F   ++ +++ G   T  +TE G VY+ G+N   Q
Sbjct: 183 WGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQ 242

Query: 103 LGISENIG---YSLE--PLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LG+   +    Y++E  P+ +  L    V Q+S GY H++A+T DG+++MWG        
Sbjct: 243 LGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFMWG-------- 294

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                AK+   P ++  L          G   + A++  G + ++G G S  LGHG+  +
Sbjct: 295 -----AKLWLEPHEMTILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKT 349

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            L          P L++ L    V     G+ H   +
Sbjct: 350 QL---------QPLLVESLNRYNVVSMTCGYSHMGAL 377



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 24/236 (10%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V +WG G  G+LGHG      G   S  E +PR+++  EG  +     G  HSA ID+ G
Sbjct: 7   VFTWGTGTQGQLGHGSFEKT-GIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDKEG 65

Query: 258 RVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
           ++Y +G     ++     N   +  P ++  L   +  ++ CG YHT  +   G+L+TWG
Sbjct: 66  KLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTWG 125

Query: 314 -----SNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKHTAAIS-EGKILTWGW 366
                   +G LG    +    P  V+    +  PV  V CG  HT A++ +G+I  W W
Sbjct: 126 WGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEI--WAW 183

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           G  +G +        G+LG+G   ++  P  V +  +     +S G + T A+ E+
Sbjct: 184 G--NGEY--------GRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 62/129 (48%), Gaps = 22/129 (17%)

Query: 303 LTSGGELYTWGSNENGCLGIGSID---VLHSPE----RVQGPFSESPVDQVSCGWKHTAA 355
           +++   ++TWG+   G LG GS +   +  S E    R+   F    + ++  G  H+AA
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCG 412
           I  EGK+ TWG    H            QLGHG+    I   P +V+    +K + +SCG
Sbjct: 61  IDKEGKLYTWGSNEYH------------QLGHGSSNQDIQSIPRVVDALRGIKIVDISCG 108

Query: 413 FNHTGALLE 421
             HTGA+ E
Sbjct: 109 EYHTGAVDE 117


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2962 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 3021

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 3022 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3080

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 3081 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3192 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3238

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3239 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3275



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3959 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4016

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4017 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4074

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4075 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4129

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4130 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4184 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4243

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4244 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4290

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4291 IQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H  VLT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 777



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4025 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4083

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4084 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4141

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4142 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4192

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4193 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4252

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4253 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4311

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4312 SAHTLAWSTSKPASAG 4327



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  ++ L     +  A G   S  +T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3283

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3284 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3018 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3077

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+ +T  GELY WG    G+LG G 
Sbjct: 3078 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3136

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3137 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3190

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3191 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3245

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3246 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3305

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3306 G-LEGQKITRVACGSSHSVA 3324



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 147/321 (45%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H   ++E  ++ +WG
Sbjct: 715 VAAGSTHCLVLTEDSEVHSWG 735



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +A G +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3246

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3247 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3295

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3296 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3327



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 735



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 131/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++  G  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4072

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 4073 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4123

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4124 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4183

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4184 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4230

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4231 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    + +T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 737



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H   L 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H   +T D E++ WG N   Q    L
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 746

Query: 156 GLGKKAAKVIP 166
           G+ K      P
Sbjct: 747 GVTKPEPTAFP 757



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 449 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 504

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 505 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 560

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 561 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 608

Query: 409 VSCG 412
           V+CG
Sbjct: 609 VACG 612


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 162/337 (48%), Gaps = 30/337 (8%)

Query: 92   VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
            V+  GLND  QLG  +     +     +     VVQ++ G     A+TV+G++Y  G+ +
Sbjct: 2872 VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEAT 2931

Query: 152  NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRL 209
            NG+LGLG  +  V PIP ++  LS    K+ A+  G   + A+T  GKV SWG G  G+L
Sbjct: 2932 NGRLGLGMSSGTV-PIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 2990

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
            GH        F R   +  PRLI+ L+  +++  A G  HSA +  +G +Y +G     +
Sbjct: 2991 GH--------FSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041

Query: 270  MLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIGSI 325
            +   +     +P ++  L      +V CG     T  LT  G +++WG  + G LG G  
Sbjct: 3042 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3101

Query: 326  DVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQL 384
            +  + P+ ++   +   V Q+ CG + + A+++ G + TWG G               +L
Sbjct: 3102 EGCNIPQNIER-LNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF------------RL 3148

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            GHG+DV    P +V      K + V+ G  H  A+ +
Sbjct: 3149 GHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD 3185



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3869 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3926

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3927 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3984

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3985 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4039

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4040 ------SEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4094 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4153

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4154 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4200

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4201 IQRPRLVAALQGKKVNRVACGSAHTLA 4227



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 140/296 (47%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 415 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 473

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 474 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 531

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 532 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 582

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H  VLT   E++
Sbjct: 583 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVH 642

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  +S         KH   I+ G   ++ W
Sbjct: 643 SWGSNDQ-CQHFDTLGVT-KPEPTAFPGLDS---------KHIVGIACGPAQSFAW 687



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3935 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3993

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3994 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4051

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4052 LQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4102

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4103 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4162

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4163 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4221

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4222 SAHTLAWSTSKPASAG 4237



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 166/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VY+ G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  ++ L     +  A G   S  +T 
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIQALKTKRIRDIAYGSSHSAPLTS 3027

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3028 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3078

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3079 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3138

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3139 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWG---- 3193

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3194 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 146/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2928 GEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2987

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+ +T  GELY WG    G+LG G 
Sbjct: 2988 GKLGHFSRMNCD-KPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGRLGHGD 3046

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3047 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3100

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3101 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3155

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3156 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3215

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3216 G-LEGQKITRVACGSSHSVA 3234



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 147/321 (45%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N              L P  + GL
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYN-----------SDMLAPQLVQGL 401

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 402 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 457

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 458 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 505

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 624

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H   ++E  ++ +WG
Sbjct: 625 VAAGSTHCLVLTEDSEVHSWG 645



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +A G +H+  LT +G +Y  GL ++G+
Sbjct: 2982 WGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEYGR 3041

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3042 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3099

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3100 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3156

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + ++G+VY +GD        Q+GN   
Sbjct: 3157 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHG----QQGNGTT 3205

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3206 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3237



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 430 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 488

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 489 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 548 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 605

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 606 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWG 645



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 131/297 (44%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            S  T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2864 STATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2921

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV S G   +GRLG G  S  +          PR I  L    VK  A  +G  H+  +
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPI--------PRQITALSSYVVKKVAVHSGGRHATAL 2973

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++  G  H+  LTS GELYT
Sbjct: 2974 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYT 3033

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3034 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3089

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3090 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3131



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3864 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3922

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3923 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3982

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3983 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4033

Query: 269  KMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4034 RLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4093

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4094 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4140

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4141 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4172



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 486 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 545

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 546 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 604

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    + +T   +V SWG+ 
Sbjct: 605 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSN 647



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 419 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 469

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 470 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 529

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 530 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 588

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H   L 
Sbjct: 589 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLT 636

Query: 421 E 421
           E
Sbjct: 637 E 637



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 10/131 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 599

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ----L 155
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H   +T D E++ WG N   Q    L
Sbjct: 600 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTL 656

Query: 156 GLGKKAAKVIP 166
           G+ K      P
Sbjct: 657 GVTKPEPTAFP 667



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 33/184 (17%)

Query: 242 IAAAGFLHSAC-------IDENGRVYI--FGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +A+ G +  AC       +  NGRVY   +    +   L Q G  +R  +++    +S+ 
Sbjct: 359 LASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQ-GLASR--NIVKIAAHSD- 414

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCG 349
               G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG
Sbjct: 415 ----GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 470

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             ++AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + 
Sbjct: 471 STYSAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVID 518

Query: 409 VSCG 412
           V+CG
Sbjct: 519 VACG 522


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 150/318 (47%), Gaps = 35/318 (11%)

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
           H+L ++  G  +A G N  G+LG       S  P+R+ GLK EVV ++ G  HS A+  D
Sbjct: 372 HSLAVSADGSAWAWGHNSHGELGDGSTR-NSPAPVRVDGLK-EVVAVAAGSSHSLALLAD 429

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G +  WG N+ GQLG G +A+    +P +V  L G+     A G   S+A+   G V +W
Sbjct: 430 GTVLAWGDNTFGQLGDGTRASH--SVPAQVRGLRGVVA--VAAGSSHSLALLADGTVWTW 485

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   +G+LG G          +T  Y P  +K LEGV V +AA G  HS  +  +G  + 
Sbjct: 486 GYNLNGQLGDGT---------TTYRYEPVAVKGLEGV-VAVAAGGN-HSLAVRSDGTAWA 534

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
           +G+    K    +G    RP+ +     ++ V      +  + S G  + WG+N +G LG
Sbjct: 535 WGENV--KGQLGDGTLTSRPAPVEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLG 592

Query: 322 IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSS 380
            GS      P RVQG      V  V+ G  H+ A+S EG +  W            G ++
Sbjct: 593 DGSTTSRPMPMRVQG---AGEVVAVAAGNGHSLALSPEGGVWAW------------GQNA 637

Query: 381 GGQLGHGNDVDYIHPTIV 398
            GQLG G     + PT V
Sbjct: 638 RGQLGEGTLDRRLAPTRV 655



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 166/353 (47%), Gaps = 46/353 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GG+H+L + + G V+A G N  GQLG          P+R+ GL   VV ++ G  HS
Sbjct: 15  IATGGSHSLSVHQDGTVWAVGGNSVGQLG-DGTTSLRRVPVRVLGLSG-VVTVAAGGGHS 72

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG NS+GQLG G    +  P+  +V  LSG+     A G   S+AV+  
Sbjct: 73  LAVHSDGTVWAWGNNSSGQLGDGSFDNRAEPV--RVRGLSGVVA--VAAGGYHSLAVSAD 128

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK------IAAAGFLH 249
           G V +WG   SG+LG G                       E V+V+        AAG  H
Sbjct: 129 GTVWAWGNNSSGQLGDGS-----------------FDNRAEPVRVRGSSGVVAVAAGGAH 171

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           S  +  +G ++ +GD    ++  +   ++  P  + ++     V  G  H+  +++ G +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTGGVTVSAGANHSLAVSADGTV 231

Query: 310 YTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGG 368
           + WG N +G LGI  +  +L  P RV  P     V  ++ G  H+ A+ +   + W WG 
Sbjct: 232 WAWGDNSHGQLGIARTTPLLSIPGRV--PEVRGSV-AMAAGDNHSLAVRDDGTV-WAWG- 286

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                  +GH   GQLG+G  VD   P  V   E V A  V+ G NH+ A+ +
Sbjct: 287 ------SNGH---GQLGNGFMVDNSEPGRVPGLEGVGA--VAAGSNHSLAVRD 328



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 169/379 (44%), Gaps = 36/379 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN   G+LG GS ++R  PV         + A+A GG H+L ++  G V+A G N  GQ
Sbjct: 84  WGNNSSGQLGDGSFDNRAEPVRVRGLS--GVVAVAAGGYHSLAVSADGTVWAWGNNSSGQ 141

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   +     EP+R+ G    V   +    HS A+  DG L+ WG N  GQLG   +  
Sbjct: 142 LG-DGSFDNRAEPVRVRGSSGVVAVAAG-GAHSLAVRSDGILWAWGDNLYGQLG--NRGE 197

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  ++G  T  A  G   S+AV+  G V +WG    G+LG  + + +L    
Sbjct: 198 FNSSEPVQVLRVTGGVTVSA--GANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSI-- 253

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  + E+ G      AAG  HS  + ++G V+ +G     ++          P 
Sbjct: 254 ------PGRVPEVRGSVAM--AAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPG 305

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     V  G  H+  +   G ++ WGSN  G  G G+   L +P RV      S 
Sbjct: 306 RVPGLEGVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVP---GVSG 362

Query: 343 VDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  V+    H+ A+S +G    W            GH+S G+LG G+  +   P  V+  
Sbjct: 363 VVGVAANVFHSLAVSADGSAWAW------------GHNSHGELGDGSTRNSPAPVRVDGL 410

Query: 402 ENVKALQVSCGFNHTGALL 420
           + V A  V+ G +H+ ALL
Sbjct: 411 KEVVA--VAAGSSHSLALL 427



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 24/324 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G    G+LG G+   R  PV         +  +A GG H+L +   G V+A G N  GQL
Sbjct: 35  GGNSVGQLGDGTTSLRRVPVRVLGLS--GVVTVAAGGGHSLAVHSDGTVWAWGNNSSGQL 92

Query: 104 GISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK 163
           G   +     EP+R+ GL   VV ++ G +HS A++ DG ++ WG NS+GQLG G    +
Sbjct: 93  G-DGSFDNRAEPVRVRGLSG-VVAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNR 150

Query: 164 VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
             P+  +            A G   S+AV   G + +WG    G+LG+  E +       
Sbjct: 151 AEPVRVRGSS----GVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFN------- 199

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPS 282
            S    ++++   GV V   +AG  HS  +  +G V+ +GD +  ++ + +       P 
Sbjct: 200 -SSEPVQVLRVTGGVTV---SAGANHSLAVSADGTVWAWGDNSHGQLGIARTTPLLSIPG 255

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            + ++  S  +  G  H+  +   G ++ WGSN +G LG G +     P RV G      
Sbjct: 256 RVPEVRGSVAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPG---LEG 312

Query: 343 VDQVSCGWKHTAAI-SEGKILTWG 365
           V  V+ G  H+ A+  +G +  WG
Sbjct: 313 VGAVAAGSNHSLAVRDDGTVWAWG 336



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 136/320 (42%), Gaps = 53/320 (16%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G LG GS  +   PV     ++  + A+A G +H+L L   G V A G N FGQ
Sbjct: 385 WGHNSHGELGDGSTRNSPAPVRVDGLKE--VVAVAAGSSHSLALLADGTVLAWGDNTFGQ 442

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      +S+ P ++ GL+  VV ++ G  HS A+  DG ++ WG N NGQLG G    
Sbjct: 443 LGDGTRASHSV-PAQVRGLRG-VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTY 500

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG---------- 212
           +  P+   V+ L G+     A G   S+AV   G   +WG    G+LG G          
Sbjct: 501 RYEPV--AVKGLEGVVA--VAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVE 556

Query: 213 -----------------------------QESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
                                          S  LG   +TS   P  ++     +V   
Sbjct: 557 VKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAG--EVVAV 614

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTC 301
           AAG  HS  +   G V+ +G  A  ++   EG   RR  P+ +  L     V  GG  + 
Sbjct: 615 AAGNGHSLALSPEGGVWAWGQNARGQL--GEGTLDRRLAPTRVQGLSGVVAVAAGGAFSL 672

Query: 302 VLTSGGELYTWGSNENGCLG 321
            +   G +++WG N  G LG
Sbjct: 673 AVRDDGSVWSWGDNAFGQLG 692



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 10/169 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+L SR  PV   A  K    A       +L +   G  +A G N  GQ
Sbjct: 535 WGENVKGQLGDGTLTSRPAPVEVKAAAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQ 590

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG        + P+R+ G   EVV ++ G  HS A++ +G ++ WG+N+ GQLG G    
Sbjct: 591 LGDGSTTSRPM-PMRVQG-AGEVVAVAAGNGHSLALSPEGGVWAWGQNARGQLGEGTLDR 648

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
           ++ P  T+V+ LSG+    A   F  S+AV   G V SWG    G+LG+
Sbjct: 649 RLAP--TRVQGLSGVVAVAAGGAF--SLAVRDDGSVWSWGDNAFGQLGN 693



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 58/118 (49%), Gaps = 4/118 (3%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F   WGN   G+LG GS  SR  P+         + A+A G  H+L L+  G V+A G N
Sbjct: 579 FPWAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVAVAAGNGHSLALSPEGGVWAWGQN 636

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             GQLG    +   L P R+ GL   V   +     S A+  DG ++ WG N+ GQLG
Sbjct: 637 ARGQLG-EGTLDRRLAPTRVQGLSGVVAVAAG-GAFSLAVRDDGSVWSWGDNAFGQLG 692


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V++ G N +GQLG + 
Sbjct: 76  GCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
            I + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQA- 193

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            IP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 194 -IPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  YG+LG G++     P  + +      +  +ACG  H+L LT  G V+A G N+ G
Sbjct: 123 WGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSG 182

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G       ++ P R++G    K VV I+ G   S A+   GE+Y+WG N NGQLGLG 
Sbjct: 183 QVGSGSTANQAI-PRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS 241

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P P +V  L GI  ++ A G+  ++ +T  G+V +WGA   G+LG G       
Sbjct: 242 SGNQ--PTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGN------ 293

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
             +S   Y   ++ E + + ++IAA    H SA   + G VY++G
Sbjct: 294 --KSNQSYPTPVVVEKDRI-IEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 140/313 (44%), Gaps = 24/313 (7%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E   ++  AC     G   L+ T    ++  G N  G LG+ + +  +LEP R+ 
Sbjct: 36  LCSEEELQVIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGD-VQSTLEPRRLD 93

Query: 120 GL-KKEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T +GE++ WG N+ GQLG G     ++P       LS  
Sbjct: 94  SLSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTN-LSNK 152

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +     
Sbjct: 153 QVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQAIPRRVTGCLQ 203

Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
            KV +  A G + S  + + G VY++G     ++      +   P  ++ L     + V 
Sbjct: 204 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C   HT+
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSTHTS 322

Query: 355 AISE--GKILTWG 365
           A     G +  WG
Sbjct: 323 AAKTQGGHVYMWG 335



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG ++ST E  PR +  L   K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------LGDVQSTLE--PRRLDSLSDKKIACLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHTCVLTSGGE 308
                G V+ +G  A  ++     NH   PS IS    ++   EV CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFSWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LGLG   + + P   +++ LS    K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDVQSTLEP--RRLDSLSD--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V SWG    G+LG+G  +   G + S       +   L   +V   A G  HS  +  
Sbjct: 118 GEVFSWGHNAYGQLGNGTINH--GLVPS------HISTNLSNKQVTEVACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG      
Sbjct: 230 GYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 282

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T   C   +F
Sbjct: 341 --SVTLPHLTHFSCTDDVF 357


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 149/335 (44%), Gaps = 40/335 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  G LG G       P V  A     ++ +ACG  HTL L++ G V++ G    G+
Sbjct: 212 WGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYGGR 271

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITV---DGELYMWGKNSNGQLGLG 158
           LG   ++     P+RI GL+   + Q++    HS+A+      G L+ +G+N  GQLG+ 
Sbjct: 272 LG-QGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYGQLGIP 330

Query: 159 KKAAKVIPIPTKVECLSGIF---TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           +       + + ++C+S +      + A G   S A+   G +  WG   SG+LG+G   
Sbjct: 331 EDKL----LTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGN-- 384

Query: 216 SILGFLRSTSEYTPRLIK---ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV----- 267
                   TS   P L++   +L    V   A G  HSA I + GR++  GD        
Sbjct: 385 -------YTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQLGA 437

Query: 268 -------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                  D + +      R P+    +     V CG  HT V+T GGE++TWG  + G L
Sbjct: 438 HLNDNQDDHVTYNVAVRVRVPTDFRCV----HVACGDSHTAVVTDGGEIFTWGRGKGGRL 493

Query: 321 GIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G G     H P  ++       V  VSCG  HTA 
Sbjct: 494 GHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTAC 528



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 54/365 (14%)

Query: 80  GAHTLFLTETGC-VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAI 138
           G  T+ + E  C +Y  G    G LG  E+   +   +  + L K++ +++ G  H+ A+
Sbjct: 196 GQATVHVKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL 255

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV---TGG 195
           + DGE++ WG    G+LG G    +  PI  ++  L  +   Q A     S AV   +  
Sbjct: 256 SKDGEVFSWGSGYGGRLGQGHLRDRFTPI--RICGLESLNLTQVACNEFHSAAVCACSKQ 313

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G + S+G    G+LG  ++  +  +++  S  +          K+   A G  HSA + E
Sbjct: 314 GALFSFGENDYGQLGIPEDKLLTSYIQCVSSLSEH--------KISRVACGSFHSAALAE 365

Query: 256 NGRVYIFGDRAVDKM------------LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           +G ++++G     ++            L + GN  R  +++       EV CG  H+  +
Sbjct: 366 HGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVM-------EVACGDQHSAFI 418

Query: 304 TSGGELYTWGSNENGCLGIGSID------VLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           T  G ++  G N  G LG    D        +   RV+ P     V  V+CG  HTA ++
Sbjct: 419 TKKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCV-HVACGDSHTAVVT 477

Query: 358 EG-KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ-VSCGFNH 415
           +G +I TWG G             GG+LGHG++++   PT +  G   K ++ VSCG  H
Sbjct: 478 DGGEIFTWGRG------------KGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAH 525

Query: 416 TGALL 420
           T   +
Sbjct: 526 TACTV 530



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 38/294 (12%)

Query: 143 ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           ++Y WG+ +NG LG G+   +    P  VE L G   ++ A G   ++A++  G+V SWG
Sbjct: 208 DIYTWGEGTNGMLGHGEDTQEA--HPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWG 265

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI---DENGRV 259
           +G  GRLG G        LR    +TP  I  LE + +   A    HSA +    + G +
Sbjct: 266 SGYGGRLGQGH-------LR--DRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGAL 316

Query: 260 YIFGDRAVDKMLFQEG----NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSN 315
           + FG+    ++   E     ++ +  S +S+   S  V CG +H+  L   G L+ WG N
Sbjct: 317 FSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKIS-RVACGSFHSAALAEHGSLWLWGCN 375

Query: 316 ENGCLGIGSIDVLHSPERVQG--PFSESPVDQVSCGWKHTAAIS-EGKIL-----TWGWG 367
           E+G LG G+      P  ++         V +V+CG +H+A I+ +G++      T+G  
Sbjct: 376 ESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYGQL 435

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+H   ++D H           V Y     V    + + + V+CG +HT  + +
Sbjct: 436 GAHLNDNQDDH-----------VTYNVAVRVRVPTDFRCVHVACGDSHTAVVTD 478



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 9/139 (6%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSA---FEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           LWG  + G+LG G+  S   P +  A       ++  +ACG  H+ F+T+ G ++  G N
Sbjct: 371 LWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDN 430

Query: 99  DFGQLGI------SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
            +GQLG        +++ Y++            V ++ G  H++ +T  GE++ WG+   
Sbjct: 431 TYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKG 490

Query: 153 GQLGLGKKAAKVIPIPTKV 171
           G+LG G    + +P   ++
Sbjct: 491 GRLGHGDNLNRHLPTEIEI 509


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P   ++     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGIGDIQSTIEPRRLNSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 24/313 (7%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E  S++  AC     G   L+ T    ++  G N  G LGI + I  ++EP R++
Sbjct: 36  LCSEEELQSIRQ-ACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGD-IQSTIEPRRLN 93

Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P       LS  
Sbjct: 94  SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 152

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK-ELE 236
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +   L+
Sbjct: 153 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 203

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
              V   A G + S  + + G VY++G     ++      +   P  ++ L     + V 
Sbjct: 204 NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C   HT+
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTS 322

Query: 355 AISE--GKILTWG 365
           A     G +  WG
Sbjct: 323 AAKTQGGHVYMWG 335



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVDDEIFVLGTNCSGCLG-------IGDIQSTIE--PRRLNSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TVD E+++ G N +G LG+G   + + P   ++  L+G   K A+L +      V  T  
Sbjct: 62  TVDDEIFVLGTNCSGCLGIGDIQSTIEP--RRLNSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFCCTDDVF 357


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 167/395 (42%), Gaps = 36/395 (9%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           S +    A  WG+   G+LG GS      PV  S     ++  +A G AH L +T  G +
Sbjct: 51  SAVAADTALAWGDNASGQLGDGSTADSSMPVAVSLPAGVTVTTVAAGAAHNLAVTSAGTI 110

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKN 150
            A G N  GQLG          P+ + GL     V  ++ G  HS A+T  G +  WG N
Sbjct: 111 LAWGDNSSGQLG-DGTTSNRHTPVAV-GLPTGVTVTAVAAGAAHSLALTSAGTVLAWGAN 168

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           + GQLG G       P P  V    G+     A G   S+AVT  G VL+WG   SG+LG
Sbjct: 169 TIGQLGDGTTIDS--PAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLG 226

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            G          +    TP ++    GV     A G LHS  +   G V  +G  +  ++
Sbjct: 227 EGT---------TIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQL 277

Query: 271 LFQEGNHARRPSLI----SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
              +G  A R + +    S       V  G   +  L+S G +  WGSN +G LG G+  
Sbjct: 278 --GDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQLGDGTTA 335

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLG 385
              +P  V  P   + V  ++ G  H  A+ S G  + W            G++S GQLG
Sbjct: 336 DRSTPVTVSSPAGTT-VTAIAGGDAHGLAVTSVGAAIAW------------GNNSFGQLG 382

Query: 386 HGNDVDYIHPTIVNFGENVKALQ-VSCGFNHTGAL 419
            G + D + P  V+       L  ++ G  H+ A+
Sbjct: 383 DGTNTDRVTPVAVSLPVGTTTLTAIAAGAAHSVAV 417



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/322 (30%), Positives = 142/322 (44%), Gaps = 21/322 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+   G+LG G+  +R  PV        ++ A+A G AH+L LT  G V A G N  GQ
Sbjct: 113 WGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTAVAAGAAHSLALTSAGTVLAWGANTIGQ 172

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG    I  S  P+ ++         ++ G  HS A+T  G +  WG N++GQLG G   
Sbjct: 173 LGDGTTI-DSPAPVDVNLPPGVTATAVAAGAAHSLAVTSAGTVLAWGDNASGQLGEGTTI 231

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P+   V   SG+     A G   S+AVT  G VL+WG+  SG+LG G  +      
Sbjct: 232 PSRTPV--VVSLPSGVTATAVAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTA------ 283

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
                 TP  +    G  V   AAG   S  +   G V  +G  +  ++   +G  A R 
Sbjct: 284 ---DRSTPVAVSLSGGTTVTAVAAGIAFSLALSSAGAVLAWGSNSSGQL--GDGTTADRS 338

Query: 281 -PSLISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  +S  P    V     G  H   +TS G    WG+N  G LG G+     +P  V  
Sbjct: 339 TPVTVSS-PAGTTVTAIAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSL 397

Query: 337 PFSESPVDQVSCGWKHTAAISE 358
           P   + +  ++ G  H+ A++ 
Sbjct: 398 PVGTTTLTAIAAGAAHSVAVAA 419


>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
           africana]
          Length = 531

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 142/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACGGA-HTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G A H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LHS C+++                                
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  V     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLVE-KERVVEIAA 291

Query: 348 CGWKHTAA--ISEGKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSAHTSAAKTQSGNVYMWG 311



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K+VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   ++G VY++G
Sbjct: 276 --------PAHVLVEKERV-VEIAACHSAHTSAAKTQSGNVYMWG 311



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGMNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 L-HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  APHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  +   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            +  +P  T   C   +F
Sbjct: 317 -SVTLPHLTHFSCTDDVF 333


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 14/240 (5%)

Query: 26  ICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF 85
           IC   +++  +      WG G +GRLG    E+   P      +      +ACG  HTL 
Sbjct: 110 ICDGHMAAVTEDGSVWTWGRGTFGRLGHEVHETGI-PEKVPGLDGMRFVKVACGHVHTLA 168

Query: 86  LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGEL 144
           LT+ G V+A G N  G +G+S+    +  P  I  L+ K+++ IS G   S+A++ + E+
Sbjct: 169 LTDDGRVFAWGNNKTGCVGVSDR--GTCAPQEIESLRGKKIIDISAGMESSAALSAEHEV 226

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           Y WG ++ GQLGLG + A+ I  PT++  L  +   Q A G    +A++  G+V +WG G
Sbjct: 227 YTWGADNYGQLGLG-QGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQG 285

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             G+  +          +      P +I  L+  +VK+ AAG  HSA +D+ GR++  G+
Sbjct: 286 LQGQTAN---------EKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 144/333 (43%), Gaps = 26/333 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+G +G+LG+G+      P +    +       A G   T  +T+ G ++  G  D  Q
Sbjct: 19  WGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQGDSNQ 78

Query: 103 LGISENIGYSLEPL------RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LG  +    S + L         GL   VV  S    H +A+T DG ++ WG+ + G+LG
Sbjct: 79  LGHGDTGDCSNQVLPREVEDAFDGLS--VVNCSICDGHMAAVTEDGSVWTWGRGTFGRLG 136

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
                     IP KV  L G+   + A G   ++A+T  G+V +WG   +G +G      
Sbjct: 137 ---HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGCVG------ 187

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG 275
               +       P+ I+ L G K+   +AG   SA +     VY +G     ++ L Q  
Sbjct: 188 ----VSDRGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGA 243

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +  +P+ I  L      ++ CG YH   L++ GE+Y WG    G        V  +   
Sbjct: 244 RYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTA-NEKKVDTNIPH 302

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWG 365
           V     ES V  ++ G  H+A + + G++ T G
Sbjct: 303 VIDALKESRVKMIAAGGSHSAVVDDKGRLFTVG 335



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 125/285 (43%), Gaps = 22/285 (7%)

Query: 42  LW--GNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           LW  G GD  +LG G        V    V  AF+  S+   +    H   +TE G V+  
Sbjct: 68  LWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVWTW 127

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G   FG+LG    +  +  P ++ GL     V+++ G+ H+ A+T DG ++ WG N  G 
Sbjct: 128 GRGTFGRLG--HEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNNKTGC 185

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           +G+  +       P ++E L G      + G E S A++   +V +WGA   G+LG GQ 
Sbjct: 186 VGVSDRGTCA---PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQG 242

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           +  +          P  I+ L  V +   A G  H   +   G VY +G     +   ++
Sbjct: 243 ARYIS--------QPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEK 294

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNEN 317
                 P +I  L  S  + +  GG H+ V+   G L+T G  E+
Sbjct: 295 KVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEED 339



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 34/286 (11%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           G LY WG    GQLG+G +  + +P   K   +        A G   + A+T GG + ++
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKE--IDNEICTFTAAGANTTAAITQGGVLWTF 71

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSACIDENGRVY 260
           G G S +LGHG           +++  PR +++  +G+ V   +    H A + E+G V+
Sbjct: 72  GQGDSNQLGHGDTGDC------SNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE-----EVVCGGYHTCVLTSGGELYTWGSN 315
            +G     ++    G+      +  K+P  +     +V CG  HT  LT  G ++ WG+N
Sbjct: 126 TWGRGTFGRL----GHEVHETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGNN 181

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
           + GC+G+       +P+ ++    +  +D +S G + +AA+S E ++ TW          
Sbjct: 182 KTGCVGVSDRGTC-APQEIESLRGKKIID-ISAGMESSAALSAEHEVYTW---------- 229

Query: 375 EDGHSSGGQLGHGNDVDYI-HPTIVNFGENVKALQVSCGFNHTGAL 419
             G  + GQLG G    YI  PT +    NV  +Q++CG  H  AL
Sbjct: 230 --GADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLAL 273



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 38/342 (11%)

Query: 88  ETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD-GELYM 146
           E G +Y  G   FGQLGI      SL P     +  E+   +    +++A     G L+ 
Sbjct: 12  EGGYLYTWGSGQFGQLGIGTQNDESL-PQIAKEIDNEICTFTAAGANTTAAITQGGVLWT 70

Query: 147 WGKNSNGQLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           +G+  + QLG G     + +V+P   + +   G+     ++      AVT  G V +WG 
Sbjct: 71  FGQGDSNQLGHGDTGDCSNQVLPREVE-DAFDGLSVVNCSICDGHMAAVTEDGSVWTWGR 129

Query: 204 GGSGRLGHG-QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           G  GRLGH   E+ I           P  +  L+G++    A G +H+  + ++GRV+ +
Sbjct: 130 GTFGRLGHEVHETGI-----------PEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAW 178

Query: 263 GDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G+     + +   G  A  P  I  L   +  ++  G   +  L++  E+YTWG++  G 
Sbjct: 179 GNNKTGCVGVSDRGTCA--PQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQ 236

Query: 320 LGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
           LG+G     +  P R++      P+ Q++CG  H  A+S  G++  WG G          
Sbjct: 237 LGLGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQ-------- 287

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               GQ  +   VD   P +++  +  +   ++ G +H+  +
Sbjct: 288 ----GQTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVV 325


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 158/354 (44%), Gaps = 45/354 (12%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKN 150
           V++ G N  G+LG   +    L P R+ GL K +V+ +S+G  HS  +T DG+L+M G N
Sbjct: 86  VWSFGQNTKGELGTG-HYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSN 144

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
            + +LGL             VE L+ IF KQ A G   ++A++  G+V  WG     + G
Sbjct: 145 LHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRG 204

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +       +  ++Y P L++   G K+K    G  HS  +D+NG +Y +G     + 
Sbjct: 205 DRSQER-----KDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGEC 259

Query: 271 ---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
               F++    +R         + ++  G +HT  +T+  ++Y WG    G  G G  + 
Sbjct: 260 GHGKFEDQETPQRIKFFDGKIIT-QIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFEN 318

Query: 328 LHSPERVQGP--------------------FSESP-VDQVSCGWKHTAAI-SEGKILTWG 365
              P+ V  P                    F + P + Q++ G  HT  + S G+I ++G
Sbjct: 319 TAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFG 378

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +            +  GQLGH    +Y  P +V    N K +QV+ G NH+  L
Sbjct: 379 Y------------NQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLCL 420



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 158/361 (43%), Gaps = 44/361 (12%)

Query: 29  RWISSTLQRRFAALW--GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           ++    +++  A +W  G    G LG G       P       K  +  L+ GG H+  +
Sbjct: 73  KYSLDQIKKYHAYVWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLV 132

Query: 87  TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV--QISTGYHHSSAITVDGEL 144
           TE G ++  G N   +LG+      S +  +   L  ++   Q++ G +H+ A++ +G++
Sbjct: 133 TEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQV 192

Query: 145 YMWG---KNSNGQLGLGKKA-AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           Y+WG    N  G     +K  AK  P+   ++  +G   KQ   G   S+A+   G + S
Sbjct: 193 YVWGGSLHNKRGDRSQERKDNAKYKPVL--LQSFAGKKIKQIDCGDFHSLALDDNGTLYS 250

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG G  G  GHG         +   + TP+ IK  +G  +    AG  H+  I  + +VY
Sbjct: 251 WGVGEKGECGHG---------KFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVY 301

Query: 261 IFGDRAVDKMLFQEGNHARRPSLIS------------------------KLPYSEEVVCG 296
            +GD    +  F E  +   P L++                          P  +++  G
Sbjct: 302 AWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAG 361

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             HT VLTS G+++++G N+ G LG  ++D    P+ V+G  +   V QV+ G  H+  +
Sbjct: 362 EMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTV-QVAAGRNHSLCL 420

Query: 357 S 357
           +
Sbjct: 421 T 421



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 47/318 (14%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   + + G  S E    ++++PV+  +F    +K + CG  H+L L + G +Y+ G+
Sbjct: 194 VWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGV 253

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            + G+ G  +       P RI     K + QI  G HH+ AIT D ++Y WG    GQ G
Sbjct: 254 GEKGECGHGK-FEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDGRYGQCG 312

Query: 157 LGKKAAKVIP----IPTKVECLSGIFT----------------KQAALGFEQSVAVTGGG 196
            G+     IP     P++    S +                  KQ A G   ++ +T  G
Sbjct: 313 FGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG 372

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           ++ S+G    G+LGH   +++  + R      P+L++ +   K    AAG  HS C+   
Sbjct: 373 QIFSFGYNQQGQLGH---NTVDNYCR------PKLVEGMLNHKTVQVAAGRNHSLCLTNK 423

Query: 257 GRVYIFGDRAV------DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
             VY  G+         D+ + +  +H    SL+S   +  ++  GG+H+ V+    E+ 
Sbjct: 424 NDVYACGNNQYGQCGLPDREMRKTFSHVL--SLLSVNSF--KLYAGGFHSWVVLD--EMM 477

Query: 311 TWGSNENGCLGIGSIDVL 328
                     G GS D L
Sbjct: 478 PKKDEFQALKGPGSDDSL 495



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 31/295 (10%)

Query: 145 YMW--GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           Y+W  G+N+ G+LG G      + +P +V  L  +     + G + S  VT  GK+   G
Sbjct: 85  YVWSFGQNTKGELGTGHYNE--VLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCG 142

Query: 203 AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
           +    +LG       L  + + S+ T + ++ L  + +K  A G  H+  + + G+VY++
Sbjct: 143 SNLHDKLG-------LEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVW 195

Query: 263 G----DRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G    ++  D+   ++ N   +P L+        +++ CG +H+  L   G LY+WG  E
Sbjct: 196 GGSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGE 255

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGT--F 373
            G  G G  +   +P+R++  F    + Q+  G  HT AI+ + ++  WG  G +G   F
Sbjct: 256 KGECGHGKFEDQETPQRIKF-FDGKIITQIEAGNHHTLAITADNQVYAWG-DGRYGQCGF 313

Query: 374 SEDGHSSGGQL----GHGNDVDYIHPTIVN-----FGENVKALQVSCGFNHTGAL 419
            E  +++  QL      GN+  Y+  ++       F +  K  Q++ G  HT  L
Sbjct: 314 GEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVL 368


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 137/273 (50%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 145/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGTHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  I  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGTH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PAQSNKPLSIGALKNLGVVYISCGDEHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G   S            GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFGDNCS------------GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGL-GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L G+        P  +  L  +     + G E +  +T  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GG H+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENI-GYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL I  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGTHSFAL 196


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 160/337 (47%), Gaps = 46/337 (13%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQIS 129
           S++A+A G  HTLFL + G V++ G N+ G+LG    +   +++ P+ +SG    +VQI+
Sbjct: 69  SVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG-GVNIVQIA 127

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  H+ A+  DG L+ WG NS+GQL L         IP +V  L+   T Q A G + +
Sbjct: 128 AGRAHNMAVADDGRLFAWGSNSHGQLALPSNITST-DIPKRVVSLTE--TVQVACGTDHT 184

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A+   G++  WG    GR+                 Y P+ I+    + V    AG  +
Sbjct: 185 IAIVESGRIFVWGLQPDGRVL----------------YAPKEIEFFMALPVVQVNAGSDY 228

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
              +  +G ++++G     ++   +      P+ ++ L +S  VV   CG  HT  LT  
Sbjct: 229 YVALTVSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTL-HSLNVVHVACGHSHTVALTHE 287

Query: 307 GELYTWGSNENGCLGIG----SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           G L+  GS+  G LG G    S + + +   + G    + V +V+CG  HT A++ GK+ 
Sbjct: 288 GRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLG----THVTRVACGRCHTLALAGGKMY 343

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            +G             +S GQLG GN    + P  ++
Sbjct: 344 AFGL------------NSSGQLGSGNVRSQVTPRPID 368



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 127/295 (43%), Gaps = 48/295 (16%)

Query: 140 VDGELYMWGKNSNGQLG-----------LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           V  +LY +G   +GQLG           + K    V+  PT  +   G+  +  A G   
Sbjct: 23  VRRQLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHD---GVSVRAIATGERH 79

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           ++ +   GKV S G+  +G LG G  QE S   +        P L+    GV +   AAG
Sbjct: 80  TLFLADDGKVWSCGSNENGELGRGGCQEGSFTIY--------PVLLSG--GVNIVQIAAG 129

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
             H+  + ++GR++ +G  +  ++           P  +  L  + +V CG  HT  +  
Sbjct: 130 RAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSLTETVQVACGTDHTIAIVE 189

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTW 364
            G ++ WG   +G        VL++P+ ++  F   PV QV+ G  +  A++  G +  W
Sbjct: 190 SGRIFVWGLQPDG-------RVLYAPKEIEF-FMALPVVQVNAGSDYYVALTVSGAMFVW 241

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G             +  GQLG  ++ +   P  V    ++  + V+CG +HT AL
Sbjct: 242 G------------SNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVAL 284



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 6/152 (3%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+ +YG+LG    + R  P   +     ++  +ACG +HT+ LT  G ++  G +  G
Sbjct: 240 VWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHTVALTHEGRLFVCGSDSCG 299

Query: 102 QLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG    +      L ++  L   V +++ G  H+ A+   G++Y +G NS+GQLG G  
Sbjct: 300 QLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALA-GGKMYAFGLNSSGQLGSGNV 358

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
            ++V P P  ++ L+ + +  A  G++QS  +
Sbjct: 359 RSQVTPRP--IDALTDVVSVFA--GWDQSFCI 386



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 36/164 (21%)

Query: 273 QEGNHARRPSLISKLPYSEE------VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            +GN  + P ++   P S +      +  G  HT  L   G++++ GSNENG LG G   
Sbjct: 47  DDGNIVKTPQVVVGAPTSHDGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQ 106

Query: 327 VLHSPERVQGPFSESPV--------DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDG 377
                   +G F+  PV         Q++ G  H  A+++ G++  WG   SHG  +   
Sbjct: 107 --------EGSFTIYPVLLSGGVNIVQIAAGRAHNMAVADDGRLFAWG-SNSHGQLALPS 157

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           + +            I   +V+  E V   QV+CG +HT A++E
Sbjct: 158 NITSTD---------IPKRVVSLTETV---QVACGTDHTIAIVE 189


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 169 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336

Query: 339 SESPV 343
           +   V
Sbjct: 337 ATPAV 341



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 35  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 93

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 203

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
            LG G+      P  V     +  ++  +C   HT+A     G +  WG
Sbjct: 264 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  ++ L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L SK+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQSKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           ++ WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 174 VTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQ 221

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   + ++  +V+CG+ HT  L +
Sbjct: 222 PTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|443293653|ref|ZP_21032747.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
 gi|385883511|emb|CCH20898.1| Regulator of chromosome condensation, RCC1 [Micromonospora lupini
           str. Lupac 08]
          Length = 710

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 171/389 (43%), Gaps = 43/389 (11%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG LG+G+  L+ +  PV        ++  +A G  H+L LT TG V A G N +
Sbjct: 68  WGRDGYGALGVGTATLDDKLSPVRVHLPTGTTISDVAAGAVHSLALTSTGTVLAWGTNYY 127

Query: 101 GQLG-------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           G LG        ++N  Y    + +      V  ++    +S A+T  G +  WG N  G
Sbjct: 128 GVLGNGTKTDNSAQNDSYVPAAVHLPA-GTTVTSVAASSTYSLALTATGTVLAWGNNDQG 186

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           QLG G      +P+P  +   + I    AA      +A+T  G VL+WG+ GSG+LG+G 
Sbjct: 187 QLGNGTNTDSYLPVPLALPAATTITAIAAA--TNHGLALTSNGTVLAWGSNGSGQLGNGN 244

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV--DKML 271
                    +T+  TP  +    G  +   AA   HS  +   G V  +G   V    ++
Sbjct: 245 ---------TTNSNTPVTVALPAGTTITAIAAAGSHSMALTSTGTVLTWGQDTVLPIPIV 295

Query: 272 FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           F  G                 V  G  H+  LTS G+++TWG+N  G LG G+      P
Sbjct: 296 FPAGITI------------TAVASGNDHSLALTSTGKVFTWGANYFGSLGNGTFANSSVP 343

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
                P +++ +  ++ G   + A+ S GK+L WG   ++G    +G  +G   G G  V
Sbjct: 344 VPASVP-TDTTITAIAGGNAQSLALTSTGKLLAWGR-NNYGQVG-NGTRTGSWPGMGVSV 400

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
               P  V+   + K   ++ G+ H+ A+
Sbjct: 401 ----PVPVSLAADTKITTMAGGYYHSLAV 425



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 8/106 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   +G LG G+  +   PV  S     ++ A+A G A +L LT TG + A G N++GQ
Sbjct: 324 WGANYFGSLGNGTFANSSVPVPASVPTDTTITAIAGGNAQSLALTSTGKLLAWGRNNYGQ 383

Query: 103 LGISEN------IGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVD 141
           +G          +G S+ P+ +S     ++  ++ GY+HS A+  +
Sbjct: 384 VGNGTRTGSWPGMGVSV-PVPVSLAADTKITTMAGGYYHSLAVAAE 428


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
            G+++T+G       G  S  + HSP   +G     P         V Q+ CG  HT A 
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 458

Query: 356 -ISEGKILTWGWGGS 369
             + G++++ G G S
Sbjct: 459 VYTTGQVVSLGRGPS 473



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 24/259 (9%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            QV+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P  +   +
Sbjct: 340 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKPHSIGALK 390

Query: 403 NVKALQVSCGFNHTGALLE 421
            +  + +SCG+ HT  L E
Sbjct: 391 TLNVVYISCGYEHTSVLTE 409


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3963 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 4020

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 4021 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 4078

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 4079 HGNRSP--CDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4133

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4134 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4188 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4247

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4248 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4294

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4295 IQRPRLVPALQGKKVNRVACGSAHTLA 4321



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 30/304 (9%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            VVQ++ G     A+TV+G++Y  G+ +NG+LGLG  +  V PIP +V  LS    K+ A+
Sbjct: 2998 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTV-PIPRQVTALSSYVVKKVAV 3056

Query: 185  --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G   + A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L+  +++ 
Sbjct: 3057 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 3107

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
             A G  HSA +  +G +Y +G     ++   +     +P ++  L      +V CG    
Sbjct: 3108 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
             T  LT  G +++WG  + G LG G  +  + P+ ++   +   V Q+ CG + + A+++
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIER-LNGQGVCQIECGAQFSLALTK 3226

Query: 359  -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
             G + TWG G               +LGHG+DV    P +V      K + V+ G  H  
Sbjct: 3227 SGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 3274

Query: 418  ALLE 421
            A+ +
Sbjct: 3275 AVTD 3278



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 3003 GGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRH 3062

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3063 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3120

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3121 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3171

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3172 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 3232 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 3286

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3287 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 3021 GEATNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 3080

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 3081 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 3139

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 3140 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 3193

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 3194 -----SEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 3248

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 3249 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3308

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3309 G-LEGQKITRVACGSSHSVA 3327



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 4029 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 4087

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  E+V ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 4088 PRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 4145

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4146 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4196

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4197 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4256

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4257 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVPALQGKKVNRVACG 4315

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4316 SAHTLAWSTSKPASAG 4331



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3075 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3134

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3135 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3192

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 3193 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 3249

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 3250 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 3298

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 3299 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3330



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAVP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + +P+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPSALPGLDT---------KHIVGIACGPAQSFAW 777



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAV-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3958 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4016

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 4017 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 4076

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G+++   AAG  HSAC+   G +Y +G     
Sbjct: 4077 LGHGNRSPC---------DRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYG 4127

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 4128 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4187

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4188 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4234

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4235 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 117/266 (43%), Gaps = 36/266 (13%)

Query: 165  IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            I +P+  E LS +   Q A G +   AVT  GKV + G   +GRLG G  S  +   R  
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQV 3043

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
            +  +  ++K     KV + + G  H+  +  +G+V+ +G+    K+      +  +P LI
Sbjct: 3044 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 3097

Query: 285  SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
              L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+       
Sbjct: 3098 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR- 3156

Query: 343  VDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            V QV+CG +     A   EG + +WG     G F        G+LG G           N
Sbjct: 3157 VIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRGGSEG------CN 3198

Query: 400  FGENVKAL------QVSCGFNHTGAL 419
              +N++ L      Q+ CG   + AL
Sbjct: 3199 IPQNIERLNGQGVCQIECGAQFSLAL 3224



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAVPMLVAGLKGLKVIDVACG 612



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 10/100 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +    +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSA 137
            F  L +++      EP  + GL  K +V I+ G   S A
Sbjct: 742 HFDTLRVTKP-----EPSALPGLDTKHIVGIACGPAQSFA 776


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 180/393 (45%), Gaps = 41/393 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG+  +G +      S+  P++  +     ++++ACG  H   +T+ G VY+ G    G
Sbjct: 233 FWGDA-FGSILDYDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSG 291

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN-GQLGLGKK 160
            +G   NI  S   L  S     V  ++ G  H+ A+TV GEL+ WG+  + GQL     
Sbjct: 292 GIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDC--- 348

Query: 161 AAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            A  +  P K+   L GI   + A G   +  +T  G++ ++G G  G LGHG      G
Sbjct: 349 YANNLWFPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQ---G 405

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----------NGRVYIFGDRAVDK 269
             R      P+ ++ L+G +VK  A G  H+A I E            +++ +GD    K
Sbjct: 406 TTR------PKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGK 459

Query: 270 MLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           +   +      P+ +  L   +  +V CG   T VL+  G ++T GS+ +G LG    D 
Sbjct: 460 LGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADG 519

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
             +   V+G      V  +S G  H A + + GK+ TWG G              GQLG 
Sbjct: 520 -RTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKE------------GQLGL 566

Query: 387 GNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           G+ ++   PT+V+  E  +   +SCG+N+T A+
Sbjct: 567 GDYLNRSTPTLVDALEGRQVESISCGYNYTAAV 599



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 141/340 (41%), Gaps = 37/340 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND-FG 101
           WGN   G +G        RP +  +     +KA+A G  H   +T +G ++  G     G
Sbjct: 285 WGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMG 344

Query: 102 QLGISENIGYSLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QL    N  +    L   + G+   VV+I+ G  H++ IT  G+LY +G  + G LG G 
Sbjct: 345 QLDCYANNLWFPHKLFSPLDGI--SVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGD 402

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV----------TGGGKVLSWGAGGSGRL 209
                 P   +VE L G   K  A G   + A+          +   K+ +WG    G+L
Sbjct: 403 TQGTTRP--KEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKL 460

Query: 210 GHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
           GH  +   L          P  +  L        + G   +  +   G V+  G      
Sbjct: 461 GHADKKMKL---------IPTCVDSLTDYDFIQVSCGMALTVVLSITGVVFTIGS----S 507

Query: 270 MLFQEGN-HARRPSLIS-----KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
           M  Q GN HA   ++ +     K  +   +  G  H  VLT+ G+++TWG  + G LG+G
Sbjct: 508 MHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGKEGQLGLG 567

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILT 363
                 +P  V        V+ +SCG+ +TAA+   KI++
Sbjct: 568 DYLNRSTPTLVDA-LEGRQVESISCGYNYTAAVCLHKIIS 606



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 24/215 (11%)

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           SIL +   TS+  P L+     + V+  A G  H+A I + G VY +G+ +   +  Q  
Sbjct: 240 SILDY-DDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVN 298

Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV----LH 329
               RP L+  +   + + V  G  H C +T  GEL+ WG   +    +G +D     L 
Sbjct: 299 IKVSRPKLVESVASLHVKAVAYGSKHACAVTVSGELFEWGEGPH----MGQLDCYANNLW 354

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P ++  P     V +++CG  HTA I S G++ T+G     GTF        G LGHG+
Sbjct: 355 FPHKLFSPLDGISVVKIACGPWHTAIITSSGQLYTYG----DGTF--------GVLGHGD 402

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
                 P  V + +  +   V+CG  HT A++E +
Sbjct: 403 TQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVL 437


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P          +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 139/313 (44%), Gaps = 24/313 (7%)

Query: 64  VCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS 119
           +CS  E   ++  AC     G   L+ T    ++  G N  G LG+ + +  ++EP R+ 
Sbjct: 12  LCSEAELQLIRQ-ACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLD 69

Query: 120 GLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
            L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P       LS  
Sbjct: 70  CLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN-LSNK 128

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
              + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +     
Sbjct: 129 QVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRVTGCLQ 179

Query: 238 VKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
            KV +  A G + S  + + G VY++G     ++      +   P  +S L     + V 
Sbjct: 180 NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVA 239

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C   HT+
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTS 298

Query: 355 AISE--GKILTWG 365
           A     G +  WG
Sbjct: 299 AAKTQGGHVYMWG 311



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++CLSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDCLSG--KKIACLSYGSGPHVVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVDTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRVSA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDCLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG   + A+ + G++  WG+ G+            GQLG G+  + 
Sbjct: 174 VTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGN------------GQLGLGSSGNQ 221

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V+  + ++  +V+CG+ HT  L +
Sbjct: 222 PTPCRVSALQGIRVQRVACGYAHTLVLTD 250



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 111

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 112 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 168

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 169 -PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 218

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 276

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 336

Query: 339 SESPV 343
           +   V
Sbjct: 337 ATPAV 341



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 35  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTE 93

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 152

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 153 GYNNSGQVGSGS---------TANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVF 203

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
            LG G+      P  V     +  ++  +C   HT+A     G +  WG
Sbjct: 264 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 174 VTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQ 221

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   + ++  +V+CG+ HT  L +
Sbjct: 222 PTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 152 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 211

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 212 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 270

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 271 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 322



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ L+G   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLTG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  ++ L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           ++ WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 202 VFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 312


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  ++  +P +  A    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 303 WGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNA 362

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  +V  ++ G  H++ IT  G+L+ +G  + G LG G
Sbjct: 363 GLLGHGTDVSHWI-PKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFGDGTFGVLGHG 421

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            +  + +  P +VE LSG+ T   A G             QS A     K+ +WG G   
Sbjct: 422 DR--ENVSYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKN 479

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +  +  +G V+  G  +V
Sbjct: 480 RLGHGDKDARL---------EPTCVSLLIDSNFHRIACGHSLTVGLTTSGEVFTMGS-SV 529

Query: 268 DKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+  KL     EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 530 YGQLGNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 589

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           ++   +P  V+    +  V  ++CG  ++AAI
Sbjct: 590 VEDRKTPTLVEA-LKDRHVKYIACGSNYSAAI 620



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 168/363 (46%), Gaps = 45/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G ++  G    G+LG  + +N+   ++P  +  +    V  ++ G 
Sbjct: 284 IACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNV---IQPRLVEAMASTTVDFVACGE 340

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
            H+ A+T+ GELY WG  ++  G LG G   +  IP       L G+       G   + 
Sbjct: 341 FHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIP-KRIAGPLEGLQVALVTCGPWHTA 399

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G++ ++G G  G LGHG   ++           PR ++ L G++    A G  H+
Sbjct: 400 LITSTGQLFTFGDGTFGVLGHGDRENV---------SYPREVESLSGLRTIAVACGVWHT 450

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG 297
           A + E           + +++ +GD   +++   + +    P+ +S L  S    + CG 
Sbjct: 451 AAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGH 510

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ GE++T GS+  G LG    D    P  V+   +   V++++CG  H A + 
Sbjct: 511 SLTVGLTTSGEVFTMGSSVYGQLGNPQSDG-KVPCLVKDKLAGESVEEIACGAYHVAVLT 569

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S+ ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N++
Sbjct: 570 SKNEVYTWGKGAN------------GRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYS 617

Query: 417 GAL 419
            A+
Sbjct: 618 AAI 620



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 114/219 (52%), Gaps = 26/219 (11%)

Query: 218 LGFLRSTSEYTPR----LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G  +S S ++PR    L + LE    + V   A G  H+A +   G ++ +G+ +  ++
Sbjct: 252 VGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRL 311

Query: 271 LFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSID 326
               G +  +P L+  +  +  + V CG +HTC +T  GELYTWG  ++  G LG G+ D
Sbjct: 312 GHGVGKNVIQPRLVEAMASTTVDFVACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGT-D 370

Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
           V H  P+R+ GP     V  V+CG  HTA I S G++ T+G     GTF        G L
Sbjct: 371 VSHWIPKRIAGPLEGLQVALVTCGPWHTALITSTGQLFTFG----DGTF--------GVL 418

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 419 GHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVEVI 457



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 49/304 (16%)

Query: 142 GELYMWGK---NSNGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVT 193
           G++Y+WG+    +  ++G  K A+   P     +P  +E    +   Q A G + +  VT
Sbjct: 236 GDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESNVVLDVLQIACGVKHAALVT 295

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ +WG    GRLGHG   +++          PRL++ +    V   A G  H+  +
Sbjct: 296 RQGELFTWGEESGGRLGHGVGKNVI---------QPRLVEAMASTTVDFVACGEFHTCAV 346

Query: 254 DENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCVLTSGG 307
              G +Y +GD   +  L   G       P  I+  P        V CG +HT ++TS G
Sbjct: 347 TMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAG-PLEGLQVALVTCGPWHTALITSTG 405

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--------- 358
           +L+T+G    G LG G  + +  P  V+   S      V+CG  HTAA+ E         
Sbjct: 406 QLFTFGDGTFGVLGHGDRENVSYPREVES-LSGLRTIAVACGVWHTAAVVEVIVTQSSAS 464

Query: 359 ---GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
               K+ TWG G  +            +LGHG+    + PT V+   +    +++CG + 
Sbjct: 465 VSSDKLFTWGDGDKN------------RLGHGDKDARLEPTCVSLLIDSNFHRIACGHSL 512

Query: 416 TGAL 419
           T  L
Sbjct: 513 TVGL 516


>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 466

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 167/400 (41%), Gaps = 73/400 (18%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE----PLRISGLKK-EVVQIS 129
           ++  G  H++ + +TG ++A G N  GQLG  E  G + E    P R+ GL+  EVV   
Sbjct: 84  SVGAGHYHSMAVAQTGELWAWGRNLEGQLG--ERDGNTREKWHQPQRVRGLESVEVVSAR 141

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
                S AI  DG L+ WGK+  GQLGLG K       P +VE L G    Q ALG+  +
Sbjct: 142 GSGVVSMAIARDGSLWTWGKSKRGQLGLGTKIMYA-QTPKRVEALVGQQVVQVALGWGHA 200

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           +A T  G V SWG   +GR         LGF  S SE     +K     K    A   + 
Sbjct: 201 LARTAEGHVYSWGYAANGR---------LGFQLSDSESAETSVK-----KTSPTAIARVD 246

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
           +  I+E     +  D   +K         R  SL S+  +  E+ CG  H+  L   GEL
Sbjct: 247 NESIEEAAYRQVLEDMEKEKSPVLAWEPVRINSLCSQ--HVTEISCGMDHSLTLNEKGEL 304

Query: 310 YTWGSNENGCLG----IGSID-----VLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
            ++G N  G LG    I ++      V +S + VQG      V  V  G  H+ A++ +G
Sbjct: 305 CSFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGLIRGEKVLHVGAGLGHSLAVTAQG 364

Query: 360 KILTWGWGGSHGTFSED---------------------------------------GHSS 380
            I +WGW   H    ++                                       G   
Sbjct: 365 SIYSWGWNAGHQLGRDERQDSSLPACVEDVEGDVVALVGGRAHSLALTSQGQLWVWGSGK 424

Query: 381 GGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            G+LG G+  D   P ++   EN    +V+CGF+H+  LL
Sbjct: 425 NGRLGLGSPADEPSPLLLESLENHCIAEVACGFDHSLILL 464



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 56/362 (15%)

Query: 43  WGNGDYGRLGL--GSLESRW-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG    G+LG   G+   +W +P      E   + +    G  ++ +   G ++  G + 
Sbjct: 104 WGRNLEGQLGERDGNTREKWHQPQRVRGLESVEVVSARGSGVVSMAIARDGSLWTWGKSK 163

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
            GQLG+   I Y+  P R+  L  ++VVQ++ G+ H+ A T +G +Y WG  +NG+LG  
Sbjct: 164 RGQLGLGTKIMYAQTPKRVEALVGQQVVQVALGWGHALARTAEGHVYSWGYAANGRLGFQ 223

Query: 157 --------------------------------------LGKKAAKVIPI-PTKVECLSGI 177
                                                 + K+ + V+   P ++  L   
Sbjct: 224 LSDSESAETSVKKTSPTAIARVDNESIEEAAYRQVLEDMEKEKSPVLAWEPVRINSLCSQ 283

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ-----ESSILGFLRSTSEYTPRLI 232
              + + G + S+ +   G++ S+G    G+LG        +SSI   + ++ ++   LI
Sbjct: 284 HVTEISCGMDHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFA-VENSEDHVQGLI 342

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           +   G KV    AG  HS  +   G +Y +G  A  ++   E   +  P+ +  +     
Sbjct: 343 R---GEKVLHVGAGLGHSLAVTAQGSIYSWGWNAGHQLGRDERQDSSLPACVEDVEGDVV 399

Query: 293 VVCGGY-HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            + GG  H+  LTS G+L+ WGS +NG LG+GS     SP  ++       + +V+CG+ 
Sbjct: 400 ALVGGRAHSLALTSQGQLWVWGSGKNGRLGLGSPADEPSPLLLE-SLENHCIAEVACGFD 458

Query: 352 HT 353
           H+
Sbjct: 459 HS 460



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 23/173 (13%)

Query: 253 IDENGRVYIFGDRAVDKMLFQE--GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
           I +  RV  FGD +   +   +  G  A  P  I+ LP  E+VV    G YH+  +   G
Sbjct: 42  IAKKTRVLSFGDGSHGALGHTDCFGGDAYEPREINGLP--EDVVSVGAGHYHSMAVAQTG 99

Query: 308 ELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTW 364
           EL+ WG N  G LG     + +  H P+RV+G  S   V     G    A   +G + TW
Sbjct: 100 ELWAWGRNLEGQLGERDGNTREKWHQPQRVRGLESVEVVSARGSGVVSMAIARDGSLWTW 159

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIH-PTIVNFGENVKALQVSCGFNHT 416
                       G S  GQLG G  + Y   P  V      + +QV+ G+ H 
Sbjct: 160 ------------GKSKRGQLGLGTKIMYAQTPKRVEALVGQQVVQVALGWGHA 200



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 27/45 (60%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +WG+G  GRLGLGS      P++  + E H +  +ACG  H+L L
Sbjct: 419 VWGSGKNGRLGLGSPADEPSPLLLESLENHCIAEVACGFDHSLIL 463


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 101 WGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNV 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG  +++ + + P RI+G  +   V  +S G  H++ IT  G+L+ +G  + G LG G
Sbjct: 161 GLLGHGKDVSHWI-PKRIAGALEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +  I  P +VE LSG+ T   A G   + A+              GK+ +WG G   
Sbjct: 220 NRES--ISCPKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G+V   G+  V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFHRIACGHSLTVGLTTSGKVLSMGN-TV 327

Query: 268 DKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+ ++      +V CG YH  VLT   E++TWG   NG LG G I
Sbjct: 328 YGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYHVAVLTIKSEVFTWGKGANGRLGHGDI 387

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           +    P  V+    +  V  ++CG   TAAI + K
Sbjct: 388 EDRKIPTLVEA-LRDRSVRHIACGANFTAAICQHK 421



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 165/366 (45%), Gaps = 46/366 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHH 134
           + CG  H+  +T+ G V+  G    G+LG       S+ P  I  L    V I + G  H
Sbjct: 82  VDCGVKHSALVTKNGEVFTWGEESGGRLGHGSRED-SIHPRLIESLAVCNVDIVACGEFH 140

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + A+T  GELY WG  ++  G LG GK  +  IP       L G+     + G   +  +
Sbjct: 141 TCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIP-KRIAGALEGLAVAYVSCGTWHTALI 199

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G++ ++G G  G LGHG   SI           P+ ++ L G+K    A G  H+A 
Sbjct: 200 TTMGQLFTFGDGTFGVLGHGNRESI---------SCPKEVESLSGLKTISVACGVWHTAA 250

Query: 253 IDE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
           I E           +G+++ +GD   DK     G+   R  P+ ++ L  Y    + CG 
Sbjct: 251 IVEVIVTQSSSSISSGKLFTWGDG--DKHRLGHGDKEPRLKPTCVASLIDYDFHRIACGH 308

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             T  LT+ G++ + G+   G LG    D    P  V+    E+ V QV+CG  H A ++
Sbjct: 309 SLTVGLTTSGKVLSMGNTVYGQLGNPRSDG-KIPCLVEEIVGENVV-QVACGSYHVAVLT 366

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
            + ++ TWG G +            G+LGHG+  D   PT+V    +     ++CG N T
Sbjct: 367 IKSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFT 414

Query: 417 GALLEY 422
            A+ ++
Sbjct: 415 AAICQH 420



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 94/184 (51%), Gaps = 19/184 (10%)

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVL 303
           G  HSA + +NG V+ +G+ +  ++       +  P LI  L     + V CG +HTC +
Sbjct: 85  GVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCAV 144

Query: 304 TSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
           T+ GELYTWG  ++  G LG G  DV H  P+R+ G      V  VSCG  HTA I+  G
Sbjct: 145 TTAGELYTWGDGTHNVGLLGHGK-DVSHWIPKRIAGALEGLAVAYVSCGTWHTALITTMG 203

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++ T+G     GTF        G LGHGN      P  V     +K + V+CG  HT A+
Sbjct: 204 QLFTFG----DGTF--------GVLGHGNRESISCPKEVESLSGLKTISVACGVWHTAAI 251

Query: 420 LEYV 423
           +E +
Sbjct: 252 VEVI 255


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 204 GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 263

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 264 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 323

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 324 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 376

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 377 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 431

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 432 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 463



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 182 LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 239

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 240 KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 298

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 299 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 350

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 351 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 409

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
            G+++T+G       G  S  + HSP   +G     P         V Q+ CG  HT A 
Sbjct: 410 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 458

Query: 356 -ISEGKILTWGWGGS 369
             + G++++ G G S
Sbjct: 459 VYTTGQVVSLGRGPS 473



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 255 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 314

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 315 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 374

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 375 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 430



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 24/259 (9%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 170 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 220

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 221 RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 280

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 281 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 339

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            QV+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P  +   +
Sbjct: 340 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKPHSIGALK 390

Query: 403 NVKALQVSCGFNHTGALLE 421
            +  + +SCG+ HT  L E
Sbjct: 391 TLNVVYISCGYEHTSVLTE 409


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 144/292 (49%), Gaps = 29/292 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N  G
Sbjct: 58  MFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKVYAAGGNSEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L  +     + ++ Q+S G + S+A+T DG L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTEERTTFQL--VSFFTAQHKIKQLSAGSNTSAALTEDGVLFMWGDNSEGQIGLA 175

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           ++A   +P     E   G      + G+  S  VT  G++ ++G   +G+LG       L
Sbjct: 176 EEANVCVP----SEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLG-------L 224

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
              +  +   P+L+  + G KV   A G  H+  + E   VY      FG   +   +F+
Sbjct: 225 SPEQLKNHRIPQLVLGIPG-KVNQVACGGGHTVALTEE-EVYTFGLGQFGQLGLGTFIFE 282

Query: 274 EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                  P ++  L     + + CG  HT +++  G +YT+G   +G LG+G
Sbjct: 283 ----TSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHGKLGLG 330



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 166/349 (47%), Gaps = 43/349 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+I+  G +H
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVN-KPTCVKALKPEKVKIAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T +G++Y  G NS GQLGLG    +     T  + +S  FT     KQ + G   S
Sbjct: 99  TLVYTEEGKVYAAGGNSEGQLGLGDTEER-----TTFQLVS-FFTAQHKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G +  WG    G++G  +E+++       SE T        G  +   + G+ H
Sbjct: 153 AALTEDGVLFMWGDNSEGQIGLAEEANVC----VPSEVTI-------GKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLF---QEGNHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+     Q  NH R P L+  +P    +V CGG HT  LT 
Sbjct: 202 SAFVTTEGELYTFGEPENGKLGLSPEQLKNH-RIPQLVLGIPGKVNQVACGGGHTVALTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
             E+YT+G  + G LG+G+     S  +V        +  ++CG  HTA IS+ G + T+
Sbjct: 261 E-EVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTF 319

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
           G  G HG            LG  N  +   PT+  NF + +  L V+CG
Sbjct: 320 G-DGRHGKLG---------LGQENFTNQFVPTLCSNFLKFIVRL-VACG 357



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 167/345 (48%), Gaps = 41/345 (11%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEV-VQISTGYHHSSAI 138
           G     + ++G V+      FG+   +ENI           LK ++   +S G  H++ I
Sbjct: 2   GEPEELVPDSGAVFT-----FGKSKFAENIPSKF------WLKNDIPAYLSCGDEHTALI 50

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKV 198
           T + +LYM+G N+ GQLGLG K    +  PT V+ L     K AA G   ++  T  GKV
Sbjct: 51  TGNSKLYMFGSNNWGQLGLGSKT--TVNKPTCVKALKPEKVKIAACGRNHTLVYTEEGKV 108

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
            + G    G+LG G       F +  S +T +        K+K  +AG   SA + E+G 
Sbjct: 109 YAAGGNSEGQLGLGDTEERTTF-QLVSFFTAQH-------KIKQLSAGSNTSAALTEDGV 160

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++++GD +  ++   E  +   PS ++       + CG YH+  +T+ GELYT+G  ENG
Sbjct: 161 LFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENG 220

Query: 319 CLGIGSIDVLHS--PERVQG-PFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
            LG+    + +   P+ V G P     V+QV+CG  HT A++E ++ T+G G        
Sbjct: 221 KLGLSPEQLKNHRIPQLVLGIP---GKVNQVACGGGHTVALTEEEVYTFGLG-------- 269

Query: 376 DGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                 GQLG G  + +   P +V   +N K   ++CG NHT  +
Sbjct: 270 ----QFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 33/244 (13%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  +TG  K+  +G+   G+LG G ++++           P  +K L+  KVKIAA
Sbjct: 43  GDEHTALITGNSKLYMFGSNNWGQLGLGSKTTV---------NKPTCVKALKPEKVKIAA 93

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHTC 301
            G  H+    E G+VY  G  +  ++   +        L+S        +++  G   + 
Sbjct: 94  CGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSA 153

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ-GPFSESPVDQVSCGWKHTAAIS-EG 359
            LT  G L+ WG N  G +G+     +  P  V  G     P+  +SCG+ H+A ++ EG
Sbjct: 154 ALTEDGVLFMWGDNSEGQIGLAEEANVCVPSEVTIG----KPISWISCGYYHSAFVTTEG 209

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTG 417
           ++ T+G                G+LG   +    H  P +V  G   K  QV+CG  HT 
Sbjct: 210 ELYTFG------------EPENGKLGLSPEQLKNHRIPQLV-LGIPGKVNQVACGGGHTV 256

Query: 418 ALLE 421
           AL E
Sbjct: 257 ALTE 260



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G G +G+LGLG+ +     P V    +   ++ +ACG  HT  +++TG +Y  G    G
Sbjct: 266 FGLGQFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDGRHG 325

Query: 102 QLGI-SENIGYSLEPLRISGLKKEVVQI 128
           +LG+  EN      P   S   K +V++
Sbjct: 326 KLGLGQENFTNQFVPTLCSNFLKFIVRL 353



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F K  ++ +ACGG H L  
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 25/305 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-S 106
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG  +
Sbjct: 69  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGT 128

Query: 107 ENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV 164
            N G  L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A + 
Sbjct: 129 TNAG--LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ- 185

Query: 165 IPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
            PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S
Sbjct: 186 -PIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGS---------S 235

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--- 280
            ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +   
Sbjct: 236 GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYP 293

Query: 281 -PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F
Sbjct: 294 TPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACF 353

Query: 339 SESPV 343
           +   V
Sbjct: 354 ATPAV 358



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 19/289 (6%)

Query: 84  LFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVD 141
           L+ T    ++  G N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +
Sbjct: 52  LYTTVNDEIFVLGTNCCGCLGLGD-VQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTE 110

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           GE++ WG N+  QLG G   A ++P       LS     + A G   S+ +T  G+V +W
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTN-LSNKQVIEVACGSYHSLVLTSDGEVFAW 169

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-AAAGFLHSACIDENGRVY 260
           G   SG++G G          + ++  PR +      KV +  A G + S  +   G V+
Sbjct: 170 GYNNSGQVGSGS---------TANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVF 220

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENG 318
           ++G     ++      +   P  ++ L     + V CG  HT VLT  G++Y WG+N  G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
            LG G+      P  V     +  ++  +C   HT+A     G +  WG
Sbjct: 281 QLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 328



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 136/292 (46%), Gaps = 42/292 (14%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 55  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 110

Query: 196 GKVLSWGAGGSGRLGHGQESS-ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           G+V +WG     +LG+G  ++ ++ +  ST+    ++I+          A G  HS  + 
Sbjct: 111 GEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIE---------VACGSYHSLVLT 161

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGG 307
            +G V+ +G     ++    G+ A +P        L SK+  +  + CG   +  + + G
Sbjct: 162 SDGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQSKVVVN--IACGQMCSMAVVNTG 217

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW 366
           E++ WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG 
Sbjct: 218 EVFVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG- 275

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                       +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 276 -----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 316



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 73  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 130

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
               P  IS    +++V+   CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 131 AGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 190

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 191 VTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGN------------GQLGLGSSGNQ 238

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   + ++  +V+CG+ HT  L +
Sbjct: 239 PTPCRVAALQGIRVQRVACGYAHTLVLTD 267



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 6/173 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   +  +ACG   ++ +  TG V+  G N  G
Sbjct: 169 WGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNG 228

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 229 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNK 287

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA--GGSGRLGH 211
           + +  P P  VE    I    A      S A T GG V  WG   G S  L H
Sbjct: 288 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPH 339



 Score = 68.6 bits (166), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 221 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 280

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 281 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 329


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3704 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3761

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3762 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3819

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3820 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 3874

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3875 ------SEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 3929 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 3988

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 3989 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4035

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4036 IQRPRLVAALQGKKVNRVACGSAHTLA 4062



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 141/316 (44%), Gaps = 20/316 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3770 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3828

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3829 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEA 3886

Query: 174  LSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G      A G    Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 3887 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 3937

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 3938 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 3997

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 3998 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4056

Query: 350  WKHTAAISEGKILTWG 365
              HT A S  K  + G
Sbjct: 4057 SAHTLAWSTSKPASAG 4072



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 562

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 563 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 620

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 621 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSIA 671

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 672 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 731

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 732 SWGSNDQ-CQHFDTLRVT-KPEPAALPGLDT---------KHIVGIACGPAQSFAW 776



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 149/321 (46%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 490

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 491 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTVPLEEPKVISAFSG 546

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 547 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 594

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D 
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID- 713

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 714 VAAGSTHCLALTEDSEVHSWG 734



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 135/298 (45%), Gaps = 24/298 (8%)

Query: 66   SAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK- 122
            +A   + +K +A   G + T F    G V++ G  D G+LG      +S  P  I  LK 
Sbjct: 2793 TALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLG-----HFSRMPRLIEALKT 2847

Query: 123  KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
            K +  I+ G  HS+A+T  GELY WG    G+LG G    ++ P   KV  L G    Q 
Sbjct: 2848 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKV--LLGHRVIQV 2905

Query: 183  ALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G    Q++A+T  G V S G G   ++G G E              P+ I+ L G  V
Sbjct: 2906 ACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNI--------PQNIERLNGQGV 2957

Query: 241  KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVC---GG 297
                 G   S  + ++G V+ +G     ++      H R+P ++  L   + V C   G 
Sbjct: 2958 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGA 3017

Query: 298  YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
             H   +T  G++Y WG N++G  G G+  V   P  VQG      + +V+CG  H+ A
Sbjct: 3018 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVA 3074



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 519 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 577

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 578 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 637 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 694

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 695 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 734



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 135/273 (49%), Gaps = 29/273 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S      P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2824 WGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2879

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++  G     ++G G 
Sbjct: 2880 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGP 2938

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +  K   IP  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2939 E-VKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2995

Query: 220  FLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                     P++++ L G K V  + +G LH   + ++G+VY +GD        Q+GN  
Sbjct: 2996 -------RKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHG----QQGNGT 3044

Query: 279  ----RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
                R+P+L+  L   +   V CG  H+   T+
Sbjct: 3045 TTVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3077



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 160/352 (45%), Gaps = 39/352 (11%)

Query: 79   GGAHTLF-LTETGCVYATG-LNDFGQLGISENIGYSLEPL-RISGLKKEVVQ---ISTGY 132
            GG+ +LF +T  G VYA G    +   G+  + G    P   I+ L   VV+   + +G 
Sbjct: 2750 GGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGT 2809

Query: 133  HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
              +    VDG+++ WG+  +G+LG   +      +P  +E L     +  A G   S A+
Sbjct: 2810 SQTGFXPVDGKVFSWGEGDDGKLGHFSR------MPRLIEALKTKRIRDIACGSSHSAAL 2863

Query: 193  TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHS 250
            T  G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQT 2914

Query: 251  ACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
              + + G V+  GD  + K+    E      P  I +L      ++ CG   +  LT  G
Sbjct: 2915 LALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSG 2974

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
             ++TWG  +   LG GS   +  P+ V+G   +  V     G  H  A+++ G++  WG 
Sbjct: 2975 VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQVYAWG- 3033

Query: 367  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                    ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 3034 --------DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3699 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3757

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3758 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3817

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3818 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 3868

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 3869 RLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3928

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 3929 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 3975

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 3976 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4007



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 575 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 634

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +VV++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 635 GKLGRGGSDGCK-TPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 693

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 694 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 736



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/243 (31%), Positives = 108/243 (44%), Gaps = 28/243 (11%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  +++ WG N   QLG G K  K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLG-GLKNKK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761

Query: 196  GKVLS------WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            GKV +      W A G G +  G      G + + S Y          VK     +G   
Sbjct: 2762 GKVYACGEATKWPAWGLG-ISSGTVPIPHGXITALSSYV---------VKKVAVHSGTSQ 2811

Query: 250  SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGG 307
            +     +G+V+ +G+    K+    G+ +R P LI  L      ++ CG  H+  LTS G
Sbjct: 2812 TGFXPVDGKVFSWGEGDDGKL----GHFSRMPRLIEALKTKRIRDIACGSSHSAALTSSG 2867

Query: 308  ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTW 364
            ELYTWG  E G LG G       P+ V+       V QV+CG +     A   EG + + 
Sbjct: 2868 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSL 2926

Query: 365  GWG 367
            G G
Sbjct: 2927 GDG 2929



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 508 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 558

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 559 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 618

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 619 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSIALTKDGQ 677

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 678 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 725

Query: 421 E 421
           E
Sbjct: 726 E 726



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 6/115 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQR 688

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q
Sbjct: 689 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQ 740



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 504 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 563

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 564 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611


>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
          Length = 622

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 163/356 (45%), Gaps = 34/356 (9%)

Query: 37  RRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           R+F   WG+G  G LG   L+ R  P  V  + F    +  ++ G +++  L+E G VY 
Sbjct: 172 RQFLYSWGSGTSGELGTQCLQDRDTPTLVQITPFGVR-VADVSLGASYSCALSEDGNVYT 230

Query: 95  TGLNDFGQLGISE---------NIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGEL 144
            G  D+GQLG+S          +   +  P RI   +++  V I+ GY ++ A+T D  +
Sbjct: 231 FGNGDWGQLGLSNPRNTVELSGDTVVATVPKRIPLFERQPAVHIAAGYAYAMALTADHHV 290

Query: 145 YMWGKNSNGQLGLGKKA----AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           Y WG N++GQ GLG  +     +++  PT V  L G    Q + G   ++A++  G + S
Sbjct: 291 YFWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYS 350

Query: 201 WGAGGSGRLGHGQE-------SSILG----FLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           WG      LG   E       S+I+G      R T    P++++     K+    AG  H
Sbjct: 351 WGLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWH 410

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSG 306
           S  I   G ++ +G     ++         RP  +      E VV   CG +HT  LT  
Sbjct: 411 SGAISVAGELFTWGVGFQWRLGHGSNEPGLRPQRVLGALVGEHVVDVACGSFHTVALTDK 470

Query: 307 GELYTWGSNENGCLGIGSI-DVLHSPERVQGP--FSESPVDQVSCGWKHTAAISEG 359
           G++Y WG N +   G  +I DV+ +P  V      +   V  +SCG +HT  + EG
Sbjct: 471 GKVYCWGDNASRQCGANAIVDVVKAPYHVANLEFIASGIVKAISCGRQHTVVVVEG 526



 Score = 81.6 bits (200), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 139/344 (40%), Gaps = 56/344 (16%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKV--------IPI 167
           ++I+     V  +S G  +S A++ DG +Y +G    GQLGL      V          +
Sbjct: 200 VQITPFGVRVADVSLGASYSCALSEDGNVYTFGNGDWGQLGLSNPRNTVELSGDTVVATV 259

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF---LRST 224
           P ++           A G+  ++A+T    V  WG    G+ G G     L F   LR  
Sbjct: 260 PKRIPLFERQPAVHIAAGYAYAMALTADHHVYFWGNNNHGQSGLGP----LSFGCELRIV 315

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------------DRAVDKM 270
            E  P L+  LEG ++   + G   +  +  +G +Y +G                  D  
Sbjct: 316 EE--PTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSWGLLECLGLGSADEVRSMVRDSA 373

Query: 271 LFQEGNHARRPSLI-----SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
           +  E   A R +++      ++P   ++V    G +H+  ++  GEL+TWG      LG 
Sbjct: 374 IMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWHSGAISVAGELFTWGVGFQWRLGH 433

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSG 381
           GS +    P+RV G      V  V+CG  HT A+++ GK+  WG   S            
Sbjct: 434 GSNEPGLRPQRVLGALVGEHVVDVACGSFHTVALTDKGKVYCWGDNASR----------- 482

Query: 382 GQLGHGNDVDYI----HPTIVNFGENVKALQVSCGFNHTGALLE 421
            Q G    VD +    H   + F  +     +SCG  HT  ++E
Sbjct: 483 -QCGANAIVDVVKAPYHVANLEFIASGIVKAISCGRQHTVVVVE 525



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 115/276 (41%), Gaps = 60/276 (21%)

Query: 42  LWGNGDYGRLGLGSL----ESRW--RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
            WGN ++G+ GLG L    E R    P + +  E   +  L+CG   TL L+  G +Y+ 
Sbjct: 292 FWGNNNHGQSGLGPLSFGCELRIVEEPTLVTTLEGKRIVQLSCGSFFTLALSNDGTLYSW 351

Query: 96  GLNDFGQLGISENIGYSLEPLRISG-----------LKKEVVQIST---------GYHHS 135
           GL +   LG ++ +   +    I G           L+ +VV++ T         G  HS
Sbjct: 352 GLLECLGLGSADEVRSMVRDSAIMGESLSAERRTVVLEPQVVRVPTQHKLVRINAGQWHS 411

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            AI+V GEL+ WG     +LG G     + P    +  L G      A G   +VA+T  
Sbjct: 412 GAISVAGELFTWGVGFQWRLGHGSNEPGLRP-QRVLGALVGEHVVDVACGSFHTVALTDK 470

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK---VKIAAAGFLHSAC 252
           GKV  WG   S + G    ++I+  +++     P  +  LE +    VK  + G  H+  
Sbjct: 471 GKVYCWGDNASRQCG---ANAIVDVVKA-----PYHVANLEFIASGIVKAISCGRQHTVV 522

Query: 253 IDE----------------------NGRVYIFGDRA 266
           + E                      +GRVY FGD A
Sbjct: 523 VVEGPHSDCQCTCCKLGPDGQPGGQHGRVYAFGDVA 558


>gi|125538482|gb|EAY84877.1| hypothetical protein OsI_06242 [Oryza sativa Indica Group]
          Length = 445

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 180/388 (46%), Gaps = 60/388 (15%)

Query: 72  SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL--EPLRISGLKK-EVVQI 128
           S+ A+A G  H+L ++  G V+A G ND GQLG   +   +   +P ++ GL+  +V  +
Sbjct: 69  SVAAVAAGHYHSLAVSAEGEVWAWGRNDEGQLGRGHHAPRNTWSKPEKVRGLENVQVRAV 128

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S     S+AI  DG L++WG++  GQLGLGK   +   +P++VE L+     + + G+  
Sbjct: 129 SACGVVSAAIGCDGSLWVWGRSRRGQLGLGKDIVEAA-VPSRVEALANYDIVKVSFGWGH 187

Query: 189 SVAVTGGGKVLSWGAGGSGRLGH-GQ------------------ESSILGFLRSTSE--- 226
           ++A+T  G +L WG   +GRLG  GQ                   SS+L  +    E   
Sbjct: 188 AMALTKDGGLLGWGYSENGRLGEIGQITQASSAKELLGKTVDKYSSSMLEAVEKMVEEKI 247

Query: 227 ---------YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                    + P L+ E+  V+V   + G  HS  +  +G V   GD    ++  +    
Sbjct: 248 RSEDNMPIIWEPSLVHEVCHVEVSDVSCGLDHSLVLCSDGIVLSGGDNTYGQLGRKSAWS 307

Query: 278 ARRPSLISKLPYSEEVVCG-GYHTCVLTSGGE------LYTWGSNENGCLG-IGSIDVLH 329
              P  IS  P+S     G    TC++++ G+      + +WG N +  LG  G  DV  
Sbjct: 308 KFLPVDISHSPFSVSASVGHSLATCIISTEGDDHAETGVLSWGWNCSSQLGRPGKEDV-- 365

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P  V G   E PV   S G  H+ A+ S+G++  WG G              G+LG G+
Sbjct: 366 -PALVDGLNGERPV-SASAGRVHSVALTSKGEVWAWGSG------------RNGRLGLGS 411

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHT 416
            +D   P +++  E  +  QV+ G +HT
Sbjct: 412 SMDEPEPFLIDTLEGAEVSQVAAGMDHT 439



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 153/370 (41%), Gaps = 81/370 (21%)

Query: 43  WGNGDYGRLGLGSLESR--W-RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG  D G+LG G    R  W +P      E   ++A++  G  +  +   G ++  G + 
Sbjct: 92  WGRNDEGQLGRGHHAPRNTWSKPEKVRGLENVQVRAVSACGVVSAAIGCDGSLWVWGRSR 151

Query: 100 FGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
            GQLG+ ++I  +  P R+  L   ++V++S G+ H+ A+T DG L  WG + NG+LG  
Sbjct: 152 RGQLGLGKDIVEAAVPSRVEALANYDIVKVSFGWGHAMALTKDGGLLGWGYSENGRLGEI 211

Query: 157 ------------LGKKAAKV---------------------IPI---PTKVECLSGIFTK 180
                       LGK   K                      +PI   P+ V  +  +   
Sbjct: 212 GQITQASSAKELLGKTVDKYSSSMLEAVEKMVEEKIRSEDNMPIIWEPSLVHEVCHVEVS 271

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
             + G + S+ +   G VLS G    G+LG  ++S+   FL     ++P  +        
Sbjct: 272 DVSCGLDHSLVLCSDGIVLSGGDNTYGQLG--RKSAWSKFLPVDISHSPFSVS------- 322

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--------QEGNHARR--PSLISKLPYS 290
             A+ G   + CI     +   GD   +  +         Q G   +   P+L+  L   
Sbjct: 323 --ASVGHSLATCI-----ISTEGDDHAETGVLSWGWNCSSQLGRPGKEDVPALVDGLNGE 375

Query: 291 EEVVC--GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF-----SESPV 343
             V    G  H+  LTS GE++ WGS  NG LG+GS   +  PE    PF       + V
Sbjct: 376 RPVSASAGRVHSVALTSKGEVWAWGSGRNGRLGLGS--SMDEPE----PFLIDTLEGAEV 429

Query: 344 DQVSCGWKHT 353
            QV+ G  HT
Sbjct: 430 SQVAAGMDHT 439



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 21/158 (13%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+  YG+LG  S  S++ PV  S    HS  +++    H+L      C+ +T  +D  + 
Sbjct: 293 GDNTYGQLGRKSAWSKFLPVDIS----HSPFSVSASVGHSL----ATCIISTEGDDHAET 344

Query: 104 GI-------SENIGYSLE---PLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSN 152
           G+       S  +G   +   P  + GL  E  V  S G  HS A+T  GE++ WG   N
Sbjct: 345 GVLSWGWNCSSQLGRPGKEDVPALVDGLNGERPVSASAGRVHSVALTSKGEVWAWGSGRN 404

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSV 190
           G+LGLG    +  P P  ++ L G    Q A G + ++
Sbjct: 405 GRLGLGSSMDE--PEPFLIDTLEGAEVSQVAAGMDHTL 440


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 21/272 (7%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG  S +S  RP    A     +  ++CG  H++ +   G V+  G    GQL
Sbjct: 53  GDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQL 112

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E+   S  P +I+ L   +++Q+S G++HS A++ DG+++ WG N  GQLGLG    
Sbjct: 113 GIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLC 172

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P KV+ L GI   Q A G   S A++  G    WG   SG+L     S+      
Sbjct: 173 SQAS-PQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSA------ 225

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-- 280
               Y P  I  L+ + V   + G+ H++ + E+G+V+ FG  + +++      H+ R  
Sbjct: 226 KEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQL-----QHSPRSG 280

Query: 281 ---PSLISKL-PYSEEVVCGGYHTC--VLTSG 306
              P LI  +  +  ++ CG YHT   V T+G
Sbjct: 281 RGGPQLIEGIGGHVSQIECGSYHTIAYVYTTG 312



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/315 (31%), Positives = 151/315 (47%), Gaps = 41/315 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTG 131
           LKA A G  H+L L     VY+ G N  GQLG  ++   +  P  I  L    +  +S G
Sbjct: 31  LKA-ASGERHSLLLFSNHRVYSCGDNSRGQLG-QKSPQSTKRPEPIQALSTVHIDLVSCG 88

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
             HS A+   G ++ WG  S GQLG+G+ + ++  +PTK+  L+GI   Q + G   S+A
Sbjct: 89  KEHSVAVCHQGRVFTWGAGSEGQLGIGE-SKEISFMPTKINSLAGIKIIQVSCGHYHSLA 147

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           ++  G+V SWG+   G+LG G            S+ +P+ +K LEG+ +   AAG  HS 
Sbjct: 148 LSEDGQVFSWGSNRQGQLGLGN--------NLCSQASPQKVKSLEGIPLAQVAAGGTHSF 199

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHAR----RPSLISKLPYSEEVV--CGGYHTCVLTS 305
            +   G  + +G+    ++    GN A+    +P  I  L     V   CG  HT VLT 
Sbjct: 200 ALSLMGTSFGWGNNRSGQLALS-GNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTE 258

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP---------VDQVSCGWKHTAA- 355
            G+++T+G       G  S  + HSP   +G     P         V Q+ CG  HT A 
Sbjct: 259 DGQVFTFG-------GSSSEQLQHSPRSGRG----GPQLIEGIGGHVSQIECGSYHTIAY 307

Query: 356 -ISEGKILTWGWGGS 369
             + G++++ G G S
Sbjct: 308 VYTTGQVVSLGRGPS 322



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 91/176 (51%), Gaps = 3/176 (1%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG G  G+LG+G S E  + P   ++     +  ++CG  H+L L+E G V++ G N  G
Sbjct: 104 WGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQG 163

Query: 102 QLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL-GK 159
           QLG+  N+     P ++  L+   + Q++ G  HS A+++ G  + WG N +GQL L G 
Sbjct: 164 QLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGN 223

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            A + I  P  +  L  +     + G+E +  +T  G+V ++G   S +L H   S
Sbjct: 224 SAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRS 279



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 122/259 (47%), Gaps = 24/259 (9%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P ++E  +G+   +AA G   S+ +    +V S G    G+LG     S           
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST---------K 69

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH-ARRPSLISK 286
            P  I+ L  V + + + G  HS  +   GRV+ +G  +  ++   E    +  P+ I+ 
Sbjct: 70  RPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINS 129

Query: 287 LPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPV 343
           L   +  +V CG YH+  L+  G++++WGSN  G LG+G ++    SP++V+      P+
Sbjct: 130 LAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKS-LEGIPL 188

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSH-GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
            QV+ G  H+ A+S     ++GWG +  G  +  G+S+  Q+          P  +   +
Sbjct: 189 AQVAAGGTHSFALSLMGT-SFGWGNNRSGQLALSGNSAKEQI--------YKPHSIGALK 239

Query: 403 NVKALQVSCGFNHTGALLE 421
            +  + +SCG+ HT  L E
Sbjct: 240 TLNVVYISCGYEHTSVLTE 258


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 149/302 (49%), Gaps = 24/302 (7%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDG-ELYMW 147
           +Y+ G N FGQ   +      L P R+     ++  V+ +++G  H  AI   G ++Y W
Sbjct: 98  IYSWGYNYFGQCASNSQSIIQL-PTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 148 GKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
           G N  GQLG G +  +  P P  +   + +FT   + G + S+A++  G++ SWG G  G
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPT-VFTS-VSCGAQHSMALSNYGELYSWGCGTGG 214

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           R GHG E+  L         +P+++  L G ++   A G LHSA  D  G VY +G    
Sbjct: 215 RTGHGSEAPSL---------SPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY 265

Query: 268 DKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++          P+ +  +   +  +V CG  HT +LT+ G +Y++G N  G LG+G  
Sbjct: 266 GQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGY 325

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGW--GGSHGTFSEDGHSSGG 382
                P++V  P  E  VD VS G+ HT  ++ +G + +WG+   G+ G     GH S  
Sbjct: 326 ADSQQPKKVDLP--EHAVDIVS-GYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKP 382

Query: 383 QL 384
           +L
Sbjct: 383 KL 384



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 124/287 (43%), Gaps = 16/287 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK--ALACGGAHTLFLTETGC-VYATGLND 99
           WG   +G+    S      P          L+  A+A G +H L +   G  VYA G N 
Sbjct: 101 WGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAWGCNR 160

Query: 100 FGQLGISENIGYSLE-PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +GQLG  +    +   P+ I+        +S G  HS A++  GELY WG  + G+ G G
Sbjct: 161 WGQLGTGDQTNRATPTPIAIA-TPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            +A  + P    V  L G      A G   S A    G V +WG    G+LG+      L
Sbjct: 220 SEAPSLSP--QVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHL 277

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                    +P  ++++E   V     G  H+  +   G +Y FG     ++       +
Sbjct: 278 ---------SPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADS 328

Query: 279 RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           ++P  +    ++ ++V G YHT  LT+ G +Y+WG   +G LG+G I
Sbjct: 329 QQPKKVDLPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDI 375



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 41/273 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG  + +    P      EKH +  + CG  HT  LT  G +Y+ G N  GQ
Sbjct: 260 WGWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQ 319

Query: 103 LGISENIGY--SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG+    GY  S +P ++  L +  V I +GY+H+  +T  G +Y WG  S+G LGLG  
Sbjct: 320 LGVG---GYADSQQPKKVD-LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDI 375

Query: 161 A-----AKVIPIP-----------------------TKVECLSGIFTKQAALGFEQSVAV 192
           A      K+IP+                        T      G   ++ A G   S  +
Sbjct: 376 AGHQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAII 435

Query: 193 TGGGKVLSWGAGGSGRLGHG---QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
           T  GK+  +G G S R+G+G   ++  I   ++S      +LI+    V+ K +     +
Sbjct: 436 TTSGKLYCFGFGDSYRIGNGTNTEDQDIPCQVKSDEWGIEKLIQ----VEPKSSIDQIFN 491

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           S  I+   +       +   ++    NH  + S
Sbjct: 492 SISINNTDKKKRSNGNSNSNIITDRNNHKTKSS 524



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 37/248 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GR G GS      P V SA     + ++A G  H+      G VY  G N +GQ
Sbjct: 208 WGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQ 267

Query: 103 LGISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG--- 158
           LG +      L P ++  ++K  VV+++ G +H+  +T +G +Y +G N  GQLG+G   
Sbjct: 268 LG-NNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYA 326

Query: 159 -KKAAKVIPIPT-KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG------ 210
             +  K + +P   V+ +SG +          ++ +T  G V SWG    G LG      
Sbjct: 327 DSQQPKKVDLPEHAVDIVSGYY---------HTLCLTNKGNVYSWGYMSDGALGLGDIAG 377

Query: 211 HGQESSILGFLRSTSEYTPRL-----IKEL--EGVKVKIA--------AAGFLHSACIDE 255
           H  +  ++        Y+  +     I E   EG   + A        AAG  +SA I  
Sbjct: 378 HQSKPKLIPLSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAIITT 437

Query: 256 NGRVYIFG 263
           +G++Y FG
Sbjct: 438 SGKLYCFG 445



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 28/229 (12%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAGFLHS-ACI 253
           ++ SWG    G+     +S I           P  +++L  +++++   A+G  H  A +
Sbjct: 97  QIYSWGYNYFGQCASNSQSII---------QLPTRVEQLINMQLRVLAMASGDSHVLAIV 147

Query: 254 DENGRVYIFG-DRAVDKMLFQEGNHAR-RPSLISKLPYSEEVVCGGYHTCVLTSGGELYT 311
               +VY +G +R        + N A   P  I+       V CG  H+  L++ GELY+
Sbjct: 148 HPGNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYS 207

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
           WG    G  G GS     SP+ V     +  +  ++ G  H+AA    G + TWGW    
Sbjct: 208 WGCGTGGRTGHGSEAPSLSPQVVSALVGKQ-ITSMAGGMLHSAATDLRGSVYTWGW---- 262

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                   +  GQLG+     ++ P  +   E    ++V+CG NHT  L
Sbjct: 263 --------NKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLL 303



 Score = 38.1 bits (87), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 47/116 (40%), Gaps = 11/116 (9%)

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFS-ESPVDQVSCGWKHTAAISEGKILTWGW 366
           ++Y+WG N  G     S  ++  P RV+   + +  V  ++ G  H  AI       + W
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
           G +            GQLG G+  +   PT +          VSCG  H+ AL  Y
Sbjct: 157 GCNRW----------GQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNY 202


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 175 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE-KDRIIEIAACH 293

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 294 SAHTSAAKTQGGHVYMWG 311



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G         ++CG   + A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 174 VTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 221

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + ++  +V+CG+ HT  L +
Sbjct: 222 PTPCRIAALQGIRVQRVACGYAHTLVLTD 250



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVAVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSA 299



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 172/388 (44%), Gaps = 37/388 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKAL-ACGGAHTLF-LTETGCVYATGLND 99
            +WG+   G+L         +P+ C +     LK     GG  T+F +T  G VYA+G  +
Sbjct: 3548 VWGHNHRGQLACMDSSQVKKPLACDSLS--VLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 100  FGQLGI---SENIGYSLEPLRISGLKKEV-VQISTGYHHSSAITVDGELYMWGKNSNGQL 155
             G+LGI   +    Y + P  + GL   + V +++G  H  A++  GE+Y WG   +G+L
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDGKL 3665

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            GLG +       P  V+ LS       A G   S A++  G + +WG G  GRLGHG   
Sbjct: 3666 GLGNRVTH--SKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYE 3723

Query: 216  SILGFLRSTSEYTPRLIKELEGVK-VKIAA-AGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
              L          P+L++ L     VK+A  +G   + C+  +  V+ +GD    K+   
Sbjct: 3724 DYL---------YPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHN 3774

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                 + P  I  L      ++ CG   +  L++ G LYTWG  +   LG GS + +  P
Sbjct: 3775 ISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKP 3834

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
            + V G      + Q S G  H  A++ +G++  W            G +  GQLG G   
Sbjct: 3835 KPVSG-LQGKKIVQFSTGSLHVLALTDDGEVYAW------------GDNDEGQLGDGTAH 3881

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P  +   +  +  QVSCG  H+ A
Sbjct: 3882 PIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 178/387 (45%), Gaps = 37/387 (9%)

Query: 42   LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLFL-TETGCVYATGLND 99
            +WG  D G+LG  +     RP    A    +LK +   GG+ +LF+ +  G V+  G + 
Sbjct: 2597 VWGLNDKGQLGGLNGSKVKRPTFNEALT--ALKPIEIVGGSKSLFIVSNEGKVFVCGDSS 2654

Query: 100  FGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLG 156
             G+LGI    G    P +I GL + V++   + +G  H+ A+++DG++  WG   +G+LG
Sbjct: 2655 GGRLGIPF-CGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSWGDGEDGKLG 2713

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G      +  P  ++ L        A G   S A+T  G++ +WG G  GRLGH  E  
Sbjct: 2714 HGDILT--LDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQYGRLGHSDE-- 2769

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQE 274
                    S++TP+L+KE  G  +   A G     +  +D  G VY +GD    K+    
Sbjct: 2770 -------VSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGG 2822

Query: 275  GNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +    P  + +L      ++ CG   +  LT+ G+++TWG  E   LG+G  + +  P 
Sbjct: 2823 SDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPT 2882

Query: 333  RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
             V        +D ++ G  H  A+S +G +  WG         ++ H   GQ G+G    
Sbjct: 2883 LV-NQLKLVTIDHIAVGTLHCIAVSTQGDVYCWG---------DNDH---GQQGNGTTNA 2929

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V    N+K  +V CG + + A
Sbjct: 2930 NQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 132/279 (47%), Gaps = 26/279 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG+GD G+LGLG+  +  +P +  +     +  +ACGG H+  ++  G +Y  G   +G+
Sbjct: 3657 WGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGRYGR 3716

Query: 103  LGISENIGYSLEPLRISGL-KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            LG  +   Y L P  + GL    VV+++  +G   +  +T D  ++ WG    G+  LG 
Sbjct: 3717 LGHGDYEDY-LYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGK--LGH 3773

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P K+E LSG    Q   G + SVA++  G + +WG G   RLGHG    +  
Sbjct: 3774 NISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV-- 3831

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                     P+ +  L+G K+   + G LH   + ++G VY +GD    ++     +   
Sbjct: 3832 -------RKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIA 3884

Query: 280  RPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
            RP  I+ L     ++V CG  H+         + W S E
Sbjct: 3885 RPRPIAALKGKRIQQVSCGSAHS---------FAWASEE 3914



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 160/349 (45%), Gaps = 59/349 (16%)

Query: 92   VYATGLNDFGQLG-----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            VY  GLND GQLG            +E +  +L+P+ I G  K +  +S           
Sbjct: 2595 VYVWGLNDKGQLGGLNGSKVKRPTFNEALT-ALKPIEIVGGSKSLFIVSN---------- 2643

Query: 141  DGELYMWGKNSNGQLGL---GKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGG 195
            +G++++ G +S G+LG+   GK ++     P ++  LS    K  A+  G + ++A++  
Sbjct: 2644 EGKVFVCGDSSGGRLGIPFCGKVSS-----PRQIPGLSQFVIKTVAVHSGGKHAMALSLD 2698

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
            GKVLSWG G  G+LGHG    IL         TP+LI  L   +V   A G  HSA I  
Sbjct: 2699 GKVLSWGDGEDGKLGHG---DILTL------DTPKLIDSLLAKRVFYIACGSAHSAAITS 2749

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGY--HTCVLTSGGELYT 311
            +G +Y +G     ++   +      P L+ +       +V CG     T  L S G +Y+
Sbjct: 2750 DGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYS 2809

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSH 370
            WG  + G LG G  D   +P++V+       V Q+ CG + + A++  G++ TWG G  +
Sbjct: 2810 WGDGDFGKLGRGGSDGCCTPQKVERLVGHRVV-QIECGAQFSVALTATGQVWTWGKGEYY 2868

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                        +LG G       PT+VN  + V    ++ G  H  A+
Sbjct: 2869 ------------RLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 127/293 (43%), Gaps = 33/293 (11%)

Query: 136  SAITVDGE--LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            S I VD E  +Y+WG N  GQLG G   +KV   PT  E L+ +   +   G +    V+
Sbjct: 2585 SKIRVDSEYAVYVWGLNDKGQLG-GLNGSKV-KRPTFNEALTALKPIEIVGGSKSLFIVS 2642

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSA 251
              GKV   G    GRLG       + F    S  +PR I  L    +K  A  +G  H+ 
Sbjct: 2643 NEGKVFVCGDSSGGRLG-------IPFCGKVS--SPRQIPGLSQFVIKTVAVHSGGKHAM 2693

Query: 252  CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
             +  +G+V  +GD    K+   +      P LI  L       + CG  H+  +TS GEL
Sbjct: 2694 ALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGEL 2753

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGW 366
            YTWG  + G LG       H+P+ V+  F    + QV+CG +    +   SEG + +WG 
Sbjct: 2754 YTWGQGQYGRLGHSDEVSQHTPKLVK-EFVGKNITQVACGSRDAQTLALDSEGNVYSWG- 2811

Query: 367  GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                G F        G+LG G       P  V      + +Q+ CG   + AL
Sbjct: 2812 ---DGDF--------GKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVAL 2853



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 114/270 (42%), Gaps = 71/270 (26%)

Query: 144  LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
            +Y+WG N  GQL     +   +  P   + LS +   Q   G +   AVT  GKV + G 
Sbjct: 3546 VYVWGHNHRGQLACMDSSQ--VKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGY 3603

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              SGRLG G  +      ++    TP+L++ L  + +K+A                    
Sbjct: 3604 TESGRLGIGPYNP-----KNPYVVTPQLVQGLNNI-IKVA-------------------- 3637

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                                         V  GG H   L++ GE+Y WG  ++G LG+G
Sbjct: 3638 -----------------------------VNSGGRHCLALSTTGEVYAWGDGDDGKLGLG 3668

Query: 324  SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGG 382
            +  V HS  ++    S+  +  ++CG  H+AAIS  G + TWG G              G
Sbjct: 3669 N-RVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKG------------RYG 3715

Query: 383  QLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
            +LGHG+  DY++P +V    N   ++V+CG
Sbjct: 3716 RLGHGDYEDYLYPKLVQGLINYHVVKVACG 3745



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 145/340 (42%), Gaps = 35/340 (10%)

Query: 92   VYATGLNDFGQLGI--SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            VY  G N  GQL    S  +   L    +S LK    Q+  G     A+T  G++Y  G 
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKP--TQVIGGEQTMFAVTSYGKVYASGY 3603

Query: 150  NSNGQLGLGKKAAK--VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSG 207
              +G+LG+G    K   +  P  V+ L+ I       G    +A++  G+V +WG G  G
Sbjct: 3604 TESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVYAWGDGDDG 3663

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKEL-EGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            +LG G            +   P+L++ L +   + IA  GF HSA I   G +Y +G   
Sbjct: 3664 KLGLGNR---------VTHSKPQLVQSLSDKCIIDIACGGF-HSAAISRYGHLYTWGKGR 3713

Query: 267  VDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGI 322
              ++   +      P L+  L   +  +V CG     T  +TS   +++WG  + G LG 
Sbjct: 3714 YGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGH 3773

Query: 323  GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSG 381
               +    P +++   S   + Q+ CG + + A+S  G + TWG G              
Sbjct: 3774 NISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYF----------- 3821

Query: 382  GQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
             +LGHG+      P  V+  +  K +Q S G  H  AL +
Sbjct: 3822 -RLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD 3860



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/351 (21%), Positives = 141/351 (40%), Gaps = 50/351 (14%)

Query: 34  TLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVY 93
           TLQR+   +    +  +          +  V    E+  ++++ C     L +T +G ++
Sbjct: 414 TLQRKVHEIKNKKNIVQYWGKQFYPETKKKVILTLERLHVESVVCSRNEILVVTTSGTLH 473

Query: 94  ATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI---STGYHHSS--AITVDGELYMWG 148
                          I YS++ L     +K+++ +   S   +  +  A+T  GE+Y WG
Sbjct: 474 F--------------ISYSIDSLNFE--EKQMMNVPMKSVDVYDETYLAVTQKGEVYSWG 517

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  G LG G+K +   P P  +   S +     + G +   AVT  GK+  W     G+
Sbjct: 518 VNEFGALGHGQKYSS-FPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMW-----GK 571

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG--FLHSACIDENGRVYIFGDRA 266
           + H           S   YTP L+K +    V   + G    ++  +   G V+ F  R 
Sbjct: 572 ILHS----------SNCCYTPELVKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRN 621

Query: 267 VDKMLFQEGNHARRPSLI-SKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGI 322
            D+     G   +  ++I S + +  E+V   C      V+     ++TWG   N  LG 
Sbjct: 622 SDR-----GCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGH 676

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGT 372
            +   ++ P+ V+   S   V  +S    +  A+++ G++  WG   +  T
Sbjct: 677 NNSFRVNRPKEVKF-LSGKQVTSLSLADDYILALTDTGQVYCWGQLDNENT 726



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 41/236 (17%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E  +AVT  G+V SWG    G LGHGQ+ S        S  TP  I     + V + + G
Sbjct: 502 ETYLAVTQKGEVYSWGVNEFGALGHGQKYS--------SFPTPEPIVAFSKLIVVMVSCG 553

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCV 302
               A + E+G++Y++G       +    N    P L+  +   +  +V CG    +T  
Sbjct: 554 KDFCAAVTEDGKLYMWGK------ILHSSNCCYTPELVKSISEWHVSKVSCGSSINNTLA 607

Query: 303 LTSGGELYT--WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
           L+  G +++  + +++ GC    S++V+  P  +   +    +  + C     A I    
Sbjct: 608 LSREGYVFSFEYRNSDRGC-DDKSLNVI--PSMIVFDYE---IVSIYCHNDVNAVIDCAN 661

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGF 413
            + TWG G ++             LGH N      P  V F  G+ V +L ++  +
Sbjct: 662 NVFTWGRGNNN------------MLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDY 705



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)

Query: 256  NGRV-YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTW 312
            NG+V Y++G     ++   + +  ++P     L   +   V GG  T   +TS G++Y  
Sbjct: 3542 NGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYAS 3601

Query: 313  GSNENGCLGIGSID----VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
            G  E+G LGIG  +     + +P+ VQG  +   V  V+ G +H  A+S  G++  WG G
Sbjct: 3602 GYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKV-AVNSGGRHCLALSTTGEVYAWGDG 3660

Query: 368  GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEY 422
                          G+LG GN V +  P +V    +   + ++CG  H+ A+  Y
Sbjct: 3661 D------------DGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRY 3703


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  ++ ++K  V   T  + +  +T   E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEVASIRKACV-FGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLIPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  IP K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--IPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------IPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 177/368 (48%), Gaps = 50/368 (13%)

Query: 43  WGNGDYGRLGLGSL---ESRWRPVVCSAFEKHSLKAL--ACGGAHTLFLTETGCVYATGL 97
           WG    GRLG G L   E +  P        H +K L  ACG  HTL L   G VY+ G 
Sbjct: 54  WGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVACGIEHTLALCRDG-VYSWGS 112

Query: 98  NDFGQLGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           +++GQLG  +   ++  P+ ++ L  K+ + +  G++HS A++ D ++Y WG   +GQLG
Sbjct: 113 SEYGQLGQGDTQQHT-RPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLG 171

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           L      +  +P+ V  LSG F  Q A G+  +  +T  GKV ++G G  G+LG      
Sbjct: 172 LDSIEDAL--LPSHVTSLSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLYGQLG------ 223

Query: 217 ILGFLRSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
               L +TS+ T P+L++ LE  ++ +   G   +  +    +++ +G            
Sbjct: 224 ----LGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVSSEQKLFNWG----------RS 269

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERV 334
            H  R  +I          CG +H   +T   +++TWG N++G LG   S+D L  P  V
Sbjct: 270 PHYFRFHMIH---------CGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVV 320

Query: 335 QGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
           Q   +ES V   S G + + A+ + G++  WG   S  +     HSS  ++    DVD+ 
Sbjct: 321 QK-LNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQSL----HSSSEEI---YDVDWK 372

Query: 394 HPTIVNFG 401
            P + +F 
Sbjct: 373 LPDLSHFS 380



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 139/306 (45%), Gaps = 39/306 (12%)

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---KKAAKVIPIPTKVECLSGI 177
           ++ + V++S G HH++ ++  G++Y WGK+  G+LG G   ++  K +P   ++  +  I
Sbjct: 28  VQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRI 87

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT-PRLIKELE 236
                A G E ++A+   G V SWG+   G+LG G           T ++T P  + EL 
Sbjct: 88  KVLSVACGIEHTLALCRDG-VYSWGSSEYGQLGQG----------DTQQHTRPVYVTELS 136

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVV 294
             K      G  HS  +  + +VY +G     ++       A  PS ++ L   +  ++ 
Sbjct: 137 DKKCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLA 196

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G  HT VLT+ G++YT+G    G LG+G+      P+ VQ    +  +  + CG   T 
Sbjct: 197 AGYSHTAVLTTEGKVYTFGGGLYGQLGLGTTSKQTLPQLVQA-LEKDRIYLICCGSFETV 255

Query: 355 AI-SEGKILTWGWGGSHGTFSED-------------------GHSSGGQLGHGNDVDY-I 393
           A+ SE K+  WG    +  F                      G +  GQLGH   +D+ +
Sbjct: 256 AVSSEQKLFNWGRSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLGHSTSMDHLL 315

Query: 394 HPTIVN 399
            PT+V 
Sbjct: 316 FPTVVQ 321



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 20/131 (15%)

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-----PERVQ-GPFSESPVDQVSC 348
           CG +HT V+++ G++YTWG +  G LG G  D++       P RV+        V  V+C
Sbjct: 37  CGQHHTAVVSASGDVYTWGKSHKGRLGHG--DLIEEEGKSMPFRVEILHMHRIKVLSVAC 94

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G +HT A+    + +WG             S  GQLG G+   +  P  V    + K + 
Sbjct: 95  GIEHTLALCRDGVYSWG------------SSEYGQLGQGDTQQHTRPVYVTELSDKKCIA 142

Query: 409 VSCGFNHTGAL 419
           V CG  H+ AL
Sbjct: 143 VVCGHYHSLAL 153



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 85/236 (36%), Gaps = 69/236 (29%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G   +  V+  G V +WG    GRLGHG                                
Sbjct: 38  GQHHTAVVSASGDVYTWGKSHKGRLGHGD------------------------------- 66

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLT 304
                   I+E G+   F    +         H  R  ++S       V CG  HT  L 
Sbjct: 67  -------LIEEEGKSMPFRVEIL---------HMHRIKVLS-------VACGIEHTLALC 103

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILT 363
             G +Y+WGS+E G LG G       P  V    S+     V CG  H+ A+S + ++ +
Sbjct: 104 RDG-VYSWGSSEYGQLGQGDTQQHTRPVYV-TELSDKKCIAVVCGHYHSLALSADQQVYS 161

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           WGWG              GQLG  +  D + P+ V         Q++ G++HT  L
Sbjct: 162 WGWG------------VHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAGYSHTAVL 205


>gi|74190775|dbj|BAE28179.1| unnamed protein product [Mus musculus]
          Length = 370

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 157/355 (44%), Gaps = 47/355 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAF-EKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   YG+LGLG  E  + P   S F +   +K++  GG H+  +T+ G ++  GLN  G
Sbjct: 20  WGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDG 79

Query: 102 QLGISENIGYSLEPLRISGLKK----EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           QLG    +G++ E LR +  K      + Q++ G+  +  +T  G++   G N+ GQLG+
Sbjct: 80  QLG----LGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGV 135

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG--GSG-RLGHGQE 214
                K + +P  +ECL       AA G   ++A T  G V  WG G   SG RL  GQ 
Sbjct: 136 PHGPRKCV-VPQAIECLREKVVCVAA-GLRHALATTATGSVFQWGTGLASSGRRLCPGQN 193

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
             +  FL +     P  +  LE      A AG  HSA + + G +Y++G R     L   
Sbjct: 194 LPL--FLTAKE---PSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWG-RNKHGQLASR 247

Query: 275 GNHARRPSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
                 P  I    + +E V     G  H    T  G+++TWG  + G LG      L  
Sbjct: 248 AVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG----RRLEP 303

Query: 331 PE-----------RVQGPFSESP--------VDQVSCGWKHTAAISEGKILTWGW 366
           PE             QGP +  P          ++SCG +H  A+   K  +WGW
Sbjct: 304 PEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKCCSWGW 358



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 143/289 (49%), Gaps = 30/289 (10%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGELYMWGK 149
           ++A G N +GQLG+       L P ++S   +   +  ++ G  HS+ +T  G+L++ G 
Sbjct: 17  LFAWGANSYGQLGLGHKEDVFL-PQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGL 75

Query: 150 NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
           N +GQLGLG    +V+   T  + L G   +Q A G++ ++ +T  G+VLS G+   G+L
Sbjct: 76  NKDGQLGLG-HTEEVLRF-TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQL 133

Query: 210 G--HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD--R 265
           G  HG    ++          P+ I+ L   KV   AAG  H+      G V+ +G    
Sbjct: 134 GVPHGPRKCVV----------PQAIECLR-EKVVCVAAGLRHALATTATGSVFQWGTGLA 182

Query: 266 AVDKMLFQEGN-----HARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG 318
           +  + L    N      A+ PS ++ L  S  V  V G  H+  LT  GELY WG N++G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242

Query: 319 CLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWG 365
            L   ++  L  P+R++   F +  V  V  GW H  A +E GK+ TWG
Sbjct: 243 QLASRAV-FLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWG 290



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 131/301 (43%), Gaps = 36/301 (11%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           G+LGLG  E   R  +C       ++ +ACG   T+ LTE G V + G N FGQLG+   
Sbjct: 79  GQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG 138

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG---KNSNGQLGLGKKAAKVI 165
               + P  I  L+++VV ++ G  H+ A T  G ++ WG    +S  +L  G+     +
Sbjct: 139 PRKCVVPQAIECLREKVVCVAAGLRHALATTATGSVFQWGTGLASSGRRLCPGQNLPLFL 198

Query: 166 PI--PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRS 223
               P++V  L       A  G + S ++T  G++  W     GR  HGQ +S   FL  
Sbjct: 199 TAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVW-----GRNKHGQLASRAVFLP- 252

Query: 224 TSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIFG----------------DR 265
                P+ I+    +  KV    +G+ H     E G+V+ +G                 +
Sbjct: 253 ----LPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK 308

Query: 266 AV--DKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
            V  D  L  +G     PS +  L  + E+ CG  H   +    +  +WG NE+G  G G
Sbjct: 309 PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIR-DKCCSWGWNEHGMCGDG 367

Query: 324 S 324
           +
Sbjct: 368 T 368



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 101/243 (41%), Gaps = 25/243 (10%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S  ++    L+ WG NS GQLGLG K    +P      C +G   K    G   S  VT 
Sbjct: 8   SETVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCI-KSVTGGGGHSAVVTD 66

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
           GG +   G    G+LG G    +L F          + K L G  ++  A G+  +  + 
Sbjct: 67  GGDLFVCGLNKDGQLGLGHTEEVLRFT---------ICKPLRGCPIRQVACGWDFTIMLT 117

Query: 255 ENGRVYIFGDRAVDKMLFQEG-NHARRPSLISKLPYSEEVVC---GGYHTCVLTSGGELY 310
           E G+V   G  A  ++    G      P  I  L   E+VVC   G  H    T+ G ++
Sbjct: 118 EKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIECL--REKVVCVAAGLRHALATTATGSVF 175

Query: 311 TWG-----SNENGCLG--IGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKIL 362
            WG     S    C G  +        P RV G  + + V  V+ G  H+A++++ G++ 
Sbjct: 176 QWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHSASLTDTGELY 234

Query: 363 TWG 365
            WG
Sbjct: 235 VWG 237



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 24/174 (13%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
            P   +  E  +      G  H+  LT+TG +Y  G N  GQL  S  +   L P RI  
Sbjct: 202 EPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA-SRAVFLPL-PQRIEA 259

Query: 121 ---LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL---GKKAAKVI--------- 165
                ++V  + +G+ H  A T  G+++ WG+   GQLG      +A K +         
Sbjct: 260 HYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQ 319

Query: 166 ----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                +P+ + CL+G    + + G E ++AV    K  SWG    G  G G ES
Sbjct: 320 GPQNSVPSPLHCLTG--ATEISCGSEHNLAVIRD-KCCSWGWNEHGMCGDGTES 370



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 11/120 (9%)

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
            +++   L+ WG+N  G LG+G  + +  P+++        +  V+ G  H+A +++G  
Sbjct: 10  TVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDG-- 67

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                    G     G +  GQLG G+  + +  TI          QV+CG++ T  L E
Sbjct: 68  ---------GDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACGWDFTIMLTE 118


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 15/274 (5%)

Query: 44  GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
             G  GR G      RW  P    A +      ++CG  H+L +   G V+A G    GQ
Sbjct: 51  SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ E    +  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ 
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G  
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 282 SLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
            L+ ++     ++ CGG HT   + + G++ ++G
Sbjct: 280 QLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
           A G  H L L     V++ G N  GQLG      + L EP++ +  LK ++V  S G  H
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G +  ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGVG-ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  I  L       + CG  HT VL+  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GRGPS 317



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 35/304 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  H+  +  +  ++  G+NS GQLG  ++ A    +P  V+ L  +     +
Sbjct: 24  ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TPR I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +  L+  G  + WGSN  G L +   ++ V  +     G      V  +SCG +HTA +S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252

Query: 358 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFN 414
           + GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ CG +
Sbjct: 253 QDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDCGGD 297

Query: 415 HTGA 418
           HT A
Sbjct: 298 HTIA 301



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L  +  +V    P  +  L  +     + G E +  ++  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                G         P+L++ ++G+  +I   G    A +   G+V  FG          
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                R PS  SK P   E +   +    L S  +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 14/129 (10%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V CG  H+  +   G ++ WG+   G LG+G +  ++   R     +   + QVSCG  H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYH 139

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 410
           + A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+
Sbjct: 140 SLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVA 187

Query: 411 CGFNHTGAL 419
            G  H+ AL
Sbjct: 188 AGGAHSFAL 196


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 164/369 (44%), Gaps = 32/369 (8%)

Query: 43  WGNGDYGRLGL---GSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WGN  +  L +   G+L+   +P +    E   ++ ++ G  HTL+L+  G +Y  G N+
Sbjct: 4   WGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNE 63

Query: 100 FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG-- 156
            GQLG   N      P+ +   K   +  I+ G  HS A+   G+ + WG +S GQLG  
Sbjct: 64  VGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQLGSN 123

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           LG  A      P  ++ L+     Q A G   +V +T  G + +WGA   G+ G G    
Sbjct: 124 LGSHAQDK---PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGN--- 177

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                RS  E TP+ +  + G+ + + A G  H+  + ++G V+ +G  +  ++  Q+  
Sbjct: 178 -----RSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRE 232

Query: 277 HARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
               P+ +  L   +   + CG   T  LT  G ++T G+ E G  G G+      P +V
Sbjct: 233 SRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKV 292

Query: 335 QGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
                 S V QV+CG +H       +IL  G+G              GQLG  +    + 
Sbjct: 293 ME-LMGSTVTQVACGRRHMLCRVGERILACGYGAR------------GQLGCPHMAFALV 339

Query: 395 PTIVNFGEN 403
           PT V F  N
Sbjct: 340 PTPVTFTPN 348



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 27/282 (9%)

Query: 144 LYMWGKNSNGQLGL---GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           ++ WG  ++ +L +   G     + P  +K +  S I  +Q + G   ++ ++  G + +
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHI--QQISAGEFHTLYLSNNGHLYT 58

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
            G+   G+LG    S+           +P L+   +G  +   A G  HS  +DE G+ +
Sbjct: 59  CGSNEVGQLGRQTNSA--------DGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPF 110

Query: 261 IFGDRAVDKMLFQEGNHAR-RPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNEN 317
            +G  ++ ++    G+HA+ +P +I  L      +V CG YHT VLT+ G+LY WG+N  
Sbjct: 111 SWGSDSMGQLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSY 170

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           G  G+G+     +  +        P+  ++CG  HT A+S+   + +GWG +        
Sbjct: 171 GQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAV-FGWGKN-------- 221

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             S GQLG  +     +PT +    NVK   +SCG + T  L
Sbjct: 222 --SHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFL 261



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 127/296 (42%), Gaps = 28/296 (9%)

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           + QIS G  H+  ++ +G LY  G N  GQLG    +A     P  V+   G      A 
Sbjct: 37  IQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTS-PVLVDTFKGCTLSTIAC 95

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G + S+A+   G+  SWG+        GQ  S LG   S ++  P++IK L    V   A
Sbjct: 96  GLQHSMALDEWGQPFSWGSDSM-----GQLGSNLG---SHAQDKPKIIKTLATKNVIQVA 147

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKL---PYSEEVVCGGYHT 300
            G  H+  +  NG +Y +G  +  +  L    N    P  +S +   P +  + CG  HT
Sbjct: 148 CGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIAL-IACGSNHT 206

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EG 359
             L+  G ++ WG N +G LG+   +    P  ++       V  +SCG   TA ++ +G
Sbjct: 207 FALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT-LRNVKVCHISCGEDFTAFLTLDG 265

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            + T G G              GQ GHGN  D + P  V         QV+CG  H
Sbjct: 266 GVFTCGAG------------EYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRH 309


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  I+ L    
Sbjct: 199 TGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVIVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G         ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 198 VTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 245

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + ++  +V+CG+ HT  L +
Sbjct: 246 PTPCRIAALQGIRVQRVACGYAHTLVLTD 274



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVAVN--IACGQMCSMAVVNTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPAPVIVEKDRIIEIAACHSAHTSA 323



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 341 --SVVLPHLTHFSCTDDVF 357


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGV 238
           QAA G   S+ +    +VLS G    G+LG    Q   +           P  I+ LE +
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-----------PEPIQALETL 75

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVC 295
            V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V C
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG +          S GQL   G    V    P  V   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGSN----------SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L +
Sbjct: 244 GDAHTAVLTQ 253



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++  + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|254390852|ref|ZP_05006063.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|197704550|gb|EDY50362.1| BNR repeat domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 564

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 192 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 251

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 252 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 310

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 311 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 368

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
                   L ST    P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 369 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 418

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 419 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 474

Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
           P       S+ P V  ++ G  +  A+++G     GWG    G  G+ + D H+  GQ
Sbjct: 475 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 532



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 49/301 (16%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 182 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 239

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 240 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 289

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 290 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 344

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
           +  L  GG L  WG+N+ G LG  +I +   P  V+     SPV +++ G   + A +++
Sbjct: 345 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 402

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G I  WG         E+GH   G+LG+G   + + P  V       A ++  G NH+ A
Sbjct: 403 GTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVAGGNHSYA 450

Query: 419 L 419
           L
Sbjct: 451 L 451


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/267 (32%), Positives = 128/267 (47%), Gaps = 51/267 (19%)

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           WG+N NGQLGLG     ++P   K++   GI  K  A G E + AVT  G++  WG G  
Sbjct: 1   WGRNQNGQLGLGTTEDSLVP--QKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRY 58

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--- 263
           G LG G  +  L          P+ +  ++G K+ + A G+ H+  +   G +Y +G   
Sbjct: 59  GNLGLGDRNDRL---------VPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 109

Query: 264 ----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY-HTCVLTSGGELYTW 312
                     DR V   L      A R   IS+       + GG+ HT  LT+ G+LY W
Sbjct: 110 YGQLGHGDFEDRLVPHRL-----EALRGDNISQ-------ISGGWRHTMALTTDGKLYGW 157

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK-ILTWGWGGSHG 371
           G N+ G +G G      SP +++ P  +  V Q+SCGW+HT A+++ + + +WG G    
Sbjct: 158 GWNKFGQVGAGDNIDHCSPIQIKFP-QDQKVIQISCGWRHTLAVTDKQNVFSWGRG---- 212

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                   + GQLGHG  VD   P I+
Sbjct: 213 --------TNGQLGHGESVDRNTPMIL 231



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 17/221 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG LGLG    R  P   S+ +   +  +ACG  HT+ ++  G +Y  G + +GQ
Sbjct: 53  WGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQ 112

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG  +     L P R+  L+   + QIS G+ H+ A+T DG+LY WG N  GQ+G G   
Sbjct: 113 LGHGD-FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNI 171

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               PI  K      +   Q + G+  ++AVT    V SWG G +G+LGHG+        
Sbjct: 172 DHCSPIQIKFPQDQKVI--QISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGE-------- 221

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACID-ENGRVYI 261
            S    TP +   LE + V   +   + S+ ID  +G+ ++
Sbjct: 222 -SVDRNTPMI---LEALSVDGCSGQQIESSNIDPSSGKTWV 258



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 117/224 (52%), Gaps = 25/224 (11%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG   +G+LG G     L          P+ I+  EG+ +K+ AAG  H+A + E+G ++
Sbjct: 1   WGRNQNGQLGLGTTEDSL---------VPQKIQAFEGISIKMVAAGAEHTAAVTEDGELF 51

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLTSGGELYTWGSNENG 318
            +G      +   + N    P  +S +   + V+  CG  HT  ++S G LYT+G ++ G
Sbjct: 52  GWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYG 111

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDG 377
            LG G  +    P R++    ++ + Q+S GW+HT A++ +GK+  WGW           
Sbjct: 112 QLGHGDFEDRLVPHRLEALRGDN-ISQISGGWRHTMALTTDGKLYGWGW----------- 159

Query: 378 HSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +  GQ+G G+++D+  P  + F ++ K +Q+SCG+ HT A+ +
Sbjct: 160 -NKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTD 202



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 13/222 (5%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+ E    P    AFE  S+K +A G  HT  +TE G ++  G   +G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +     L P ++S +   ++V ++ G+ H+ +++  G LY +G +  GQLG G   
Sbjct: 61  LGLGDR-NDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFE 119

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            ++  +P ++E L G    Q + G+  ++A+T  GK+  WG    G++G G         
Sbjct: 120 DRL--VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD-------- 169

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
            +    +P  IK  +  KV   + G+ H+  + +   V+ +G
Sbjct: 170 -NIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWG 210



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 18/236 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+      SL P +I   +   +  ++ G  H++A+T DGEL+ WG    G 
Sbjct: 2   GRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LGLG +  +++P   KV  + G      A G+  +++V+  G + ++G    G+LGHG  
Sbjct: 61  LGLGDRNDRLVP--QKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDF 118

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
              L          P  ++ L G  +   + G+ H+  +  +G++Y +G     ++   +
Sbjct: 119 EDRL---------VPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGD 169

Query: 275 GNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG-SID 326
                 P  I K P  ++V+   CG  HT  +T    +++WG   NG LG G S+D
Sbjct: 170 NIDHCSPIQI-KFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVD 224


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 158/384 (41%), Gaps = 32/384 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G+      P+        ++ A+A G  H++ LT  G V A G N  GQ
Sbjct: 59  WGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGRNTEGQ 118

Query: 103 LGISENIGYSLEPLRIS---GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG +     S EP+ +S   G++  +V ++ G  HS A+T  G L  WG N  GQLG G 
Sbjct: 119 LG-NGTTTSSGEPVAVSLPSGIR--IVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGS 175

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
             +   P+  ++   + +    A       +  TG   +L+WGA   G+LG G   +++ 
Sbjct: 176 VTSSSTPVAVRLPPNTTVAAIAAGRDHNLVLTATGPAALLAWGANREGQLGDG---TVVD 232

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
             R      P  +    G+ V   A G  HS  +  +  V  +G  +  ++       + 
Sbjct: 233 RSR------PVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSL 286

Query: 280 RPSLISKLPYSEE---VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            P  +  LP   E   +  G  H+  LTS G    WG N  G LG GS      P  V  
Sbjct: 287 LPVTV-VLPVGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSL 345

Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P     +   S    H  AI +EG  L WG             +S G LG G   D   P
Sbjct: 346 PGGTRLISIASRDSDHNVAITTEGAALAWGL------------NSQGHLGDGTTTDSATP 393

Query: 396 TIVNFGENVKALQVSCGFNHTGAL 419
             V+         ++ G +H+ AL
Sbjct: 394 VAVSLPAGAALTSIAVGDDHSLAL 417



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 122/294 (41%), Gaps = 31/294 (10%)

Query: 132 YHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVA 191
           +  +SA  +   +  WG N  GQLG G       PI   V   +G      A G   SVA
Sbjct: 44  HQPASAAVMSDAILAWGGNDGGQLGDGTTTDSSEPI--AVRLPTGTTVAAVAAGDRHSVA 101

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G VL+WG    G+LG+G          +TS   P  +    G+++   A G  HS 
Sbjct: 102 LTSAGTVLAWGRNTEGQLGNGT---------TTSSGEPVAVSLPSGIRIVAVAVGADHSL 152

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV---VCGGYHTCVLTSGGE 308
            +   G +  +G     ++       +  P  + +LP +  V     G  H  VLT+ G 
Sbjct: 153 ALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAV-RLPPNTTVAAIAAGRDHNLVLTATGP 211

Query: 309 --LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             L  WG+N  G LG G++     P  V  P   + V  ++ G  H+ A+ S+  +L WG
Sbjct: 212 AALLAWGANREGQLGDGTVVDRSRPVPVNLPTGLT-VTAIAGGRDHSLALTSDDTVLAWG 270

Query: 366 WGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            G SH           GQLG G     + P  V      +A  ++ G  H+ AL
Sbjct: 271 -GNSH-----------GQLGDGTTTGSLLPVTVVLPVGAEATAIAAGRLHSLAL 312


>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 169/380 (44%), Gaps = 65/380 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN-DFG 101
           WG G  G+LG G  E R  P          +  L+    HTL L        +G N D G
Sbjct: 64  WGRGSSGQLGGGIEEIRLYP--------SPVANLSVPNIHTLALAPGQLPSFSGDNQDSG 115

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
             G  E                  + IS G  HSS + V+G++++WGK   G+LG G + 
Sbjct: 116 DDGSFE------------------LGISCGLFHSS-LLVNGKVWIWGKGDGGRLGFGHEN 156

Query: 162 AKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +P + +++E +  I     ALG   SVA+   G+V +WG GG G LGH         
Sbjct: 157 PVFVPTLNSRLESVRCI-----ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHR---- 207

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------Q 273
                E  PRL++     ++K  A    H+A I E+G VY +G    D  L         
Sbjct: 208 -----ELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPN 262

Query: 274 EGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           EG     P  +  LP     V CGG+ T  L   G+L+ WG+N N  LG G+      P+
Sbjct: 263 EGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPK 322

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            V     ++P+ Q+ CG  H+ A++ +GK+L+WG+GG             GQLGH +  +
Sbjct: 323 PVPS-LEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGH------------GQLGHSSIQN 369

Query: 392 YIHPTIVNFGENVKALQVSC 411
              P +++   + +   ++C
Sbjct: 370 EKVPRVIDALADKRVSYIAC 389



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 126/271 (46%), Gaps = 20/271 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG G +G LG         P +     +  +K +A  GAHT  +TE+G VY  G ++   
Sbjct: 192 WGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDG 251

Query: 100 ----FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                   G +E  G S+ P R+  L   V  +S G   + A+ VDG+L+ WG N+N +L
Sbjct: 252 RLGLGPGRGPNEGGGLSI-PCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFEL 310

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G       P P  V  L      Q   G   S+A+TG GKVLSWG GG G+LGH   S
Sbjct: 311 GRGNNIGGWEPKP--VPSLEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGH---S 365

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           SI       +E  PR+I  L   +V   A     SA +   G++Y++G+ A D  L   G
Sbjct: 366 SI------QNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGN-AKDSQLGVPG 418

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
               + S +  +  +E+   G YH   +  G
Sbjct: 419 LPEVQTSPVEVIFLTEDDGLGPYHVLSVAVG 449



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 23/322 (7%)

Query: 23  KLGI-CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA 81
           +LGI C  + SS L      +WG GD GRLG G     + P + S  E  S++ +A GG 
Sbjct: 121 ELGISCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGL 178

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITV 140
           H++ L   G V+  G   FG LG S      L P  + G  +  +  I+T   H++AIT 
Sbjct: 179 HSVALNALGQVFTWGYGGFGALGHSV-YHRELVPRLVEGSWRGRIKHIATSGAHTAAITE 237

Query: 141 DGELYMWGKNSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            GE+Y WG++                   + IP +V  L       +  GF  ++A+   
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGF-FTMALGVD 296

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           GK+ +WGA  +  LG G          +   + P+ +  LE   +     G  HS  +  
Sbjct: 297 GKLWNWGANTNFELGRGN---------NIGGWEPKPVPSLEDTPIIQIVCGGYHSLALTG 347

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
           +G+V  +G     ++      + + P +I  L       + C G  +  +T+ G+LY WG
Sbjct: 348 DGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWG 407

Query: 314 SNENGCLGI-GSIDVLHSPERV 334
           + ++  LG+ G  +V  SP  V
Sbjct: 408 NAKDSQLGVPGLPEVQTSPVEV 429


>gi|242021219|ref|XP_002431043.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
           corporis]
 gi|212516272|gb|EEB18305.1| serine/threonine-protein kinase Nek8, putative [Pediculus humanus
           corporis]
          Length = 369

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 161/332 (48%), Gaps = 36/332 (10%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +G GD G+LGLG S+  R +P +    E  ++  +  GG HT+ L++ G VY  G +D G
Sbjct: 46  FGQGDVGQLGLGTSITERGKPSLVKTLE--NIVDVCAGGMHTVCLSKDGVVYTFGCDDEG 103

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGK 159
            LG       S EP ++  L    VQI+ G  HS+A+  DG ++ WG  ++S+G +GL  
Sbjct: 104 ALGREATDENSFEPGQVC-LPGSAVQITAGDSHSAALLDDGRVFAWGSFRDSHGAMGLTV 162

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           +  +  PI    + L      + A G +  V +T  G++ + G    G+LG         
Sbjct: 163 QGKEKRPI----QLLQDKVITKIASGADHLVMLTFDGQLYTCGCAEQGQLG--------- 209

Query: 220 FLRSTSEYTPRLIKE------LEGVKV--KIAAAGFL--HSACIDENGRVYIFGDRAVDK 269
             R ++ ++ R  ++      L G  +  K +   F+  H+  +DENG+VY+ G +   +
Sbjct: 210 --RVSNRFSSRESRQGLSHLLLPGRILFNKRSKYDFIDHHTMALDENGKVYVLGRKDYGR 267

Query: 270 M-LFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           + L +    A+  +L+S L   E  ++ CG   +  +T  G  Y WG   NG LG+G  D
Sbjct: 268 LGLGKNCEDAKELTLVSTLSNDECTDIACGSSVSFAVTKSGACYAWGMGSNGQLGMGDDD 327

Query: 327 V-LHSPERVQGPFSE-SPVDQVSCGWKHTAAI 356
             +  P ++ G   E   V  VS G +HT  +
Sbjct: 328 SDIFEPSKILGKQLEGKNVHLVSAGGQHTVLL 359



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           +PSL+  L    +V  GG HT  L+  G +YT+G ++ G LG  + D  +S E  Q    
Sbjct: 65  KPSLVKTLENIVDVCAGGMHTVCLSKDGVVYTFGCDDEGALGREATDE-NSFEPGQVCLP 123

Query: 340 ESPVDQVSCGWKHTAA-ISEGKILTWG-WGGSHGTF 373
            S V Q++ G  H+AA + +G++  WG +  SHG  
Sbjct: 124 GSAV-QITAGDSHSAALLDDGRVFAWGSFRDSHGAM 158



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 16/198 (8%)

Query: 127 QISTGYHHSSAIT-VDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           +IS       +IT + G +  +G+   GQLGLG    +    P+ V+ L  I       G
Sbjct: 25  RISIVRDEKPSITKIPGLVLTFGQGDVGQLGLGTSITERGK-PSLVKTLENIV--DVCAG 81

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +V ++  G V ++G    G L  G+E++        + + P  +  L G  V+I  A
Sbjct: 82  GMHTVCLSKDGVVYTFGCDDEGAL--GREAT------DENSFEPGQVC-LPGSAVQI-TA 131

Query: 246 GFLHSACIDENGRVYIFGD--RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
           G  HSA + ++GRV+ +G    +   M        +RP  + +     ++  G  H  +L
Sbjct: 132 GDSHSAALLDDGRVFAWGSFRDSHGAMGLTVQGKEKRPIQLLQDKVITKIASGADHLVML 191

Query: 304 TSGGELYTWGSNENGCLG 321
           T  G+LYT G  E G LG
Sbjct: 192 TFDGQLYTCGCAEQGQLG 209


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERIVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 115/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                   +P  I   +   V+IAA    H SA   + G VY++G
Sbjct: 275 --------SPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDSDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ +V+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T   C   +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 171/369 (46%), Gaps = 52/369 (14%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHH 134
           +ACG  H + +T+ G +++ G +  G+LG   +   S +P  I  L +  VV ++ G  H
Sbjct: 303 IACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVS-QPKVIDALSESNVVLVACGEFH 361

Query: 135 SSAITVDGELYMWGKNSN--GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSV 190
           + A+TV G LY WG +++  G LG G   +  IP  +  ++E +   F    + G   + 
Sbjct: 362 TCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFV---SCGPWHTA 418

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           AV+  GK+ ++G G  G LGHG  SS       TS+  PR ++ L+G++    + G  H+
Sbjct: 419 AVSSQGKLFTFGDGTFGALGHGDRSS-------TSK--PREVESLKGLRTLKVSCGIWHT 469

Query: 251 AC----IDENGRVYIFGDRAVDKMLFQ----------EGNHARR--PSLISKLPYSEEVV 294
           A     I+E+ R+    D ++   LF            G+   R  PS +S      +V 
Sbjct: 470 AAVIDFINESDRL----DTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSMPAGVCQVA 525

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           C    T  LT  G++YT G+ + G LG     V   P    G      + Q++CG  H  
Sbjct: 526 CAHSMTIALTVLGQVYTMGAADYGQLG-SPCSVGKLPIHTDGDIRNCHIKQIACGSHHVV 584

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
           A+S  G + TWG G              GQLGHG+  D   PT+V   ++ +   V CG 
Sbjct: 585 ALSSNGDVYTWGKG------------INGQLGHGDIKDRHTPTLVKALKHKQVKSVVCGS 632

Query: 414 NHTGALLEY 422
           N T  +  +
Sbjct: 633 NFTAVICPH 641



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 160/370 (43%), Gaps = 69/370 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG--LNDF 100
           WG    G+LG G+     +P V  A  + ++  +ACG  HT  +T +G +Y  G   ++ 
Sbjct: 322 WGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNT 381

Query: 101 GQLG--------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           G LG        I   +   +E +RIS        +S G  H++A++  G+L+ +G  + 
Sbjct: 382 GYLGHGSAVSHWIPREVIGQIESVRISF-------VSCGPWHTAAVSSQGKLFTFGDGTF 434

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG------------GGKVLS 200
           G LG G +++     P +VE L G+ T + + G   + AV               GK+ +
Sbjct: 435 GALGHGDRSS--TSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFT 492

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN--GR 258
           WGAG  G+LGHG E              PRL+     +   +      HS  I     G+
Sbjct: 493 WGAGERGQLGHGDEE-------------PRLVPSCVSMPAGVCQVACAHSMTIALTVLGQ 539

Query: 259 VYIFGDRAVDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGE 308
           VY  G  A D    Q G+    P  + KLP          + +++ CG +H   L+S G+
Sbjct: 540 VYTMG--AAD--YGQLGS----PCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGD 591

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWG--- 365
           +YTWG   NG LG G I   H+P  V+       V  V CG   TA I   K ++     
Sbjct: 592 VYTWGKGINGQLGHGDIKDRHTPTLVKA-LKHKQVKSVVCGSNFTAVICPHKCVSSADQS 650

Query: 366 -WGGSHGTFS 374
              G H  F+
Sbjct: 651 ICSGCHNPFN 660



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 114/242 (47%), Gaps = 26/242 (10%)

Query: 192 VTGGGKVLSWGAGGS-----GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           V G G VL  G G S     G +   + S I+          P+ +  +  +  +I A G
Sbjct: 251 VDGPGDVLFLGEGISNLPLGGNMYDVKSSPIMRM----DALLPKALDRIAALDAQIIACG 306

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV--CGGYHTCVLT 304
             H+  + + G+++ +G+ +  K+         +P +I  L  S  V+  CG +HTC +T
Sbjct: 307 SKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVT 366

Query: 305 SGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
             G LYTWG +    G LG GS      P  V G      +  VSCG  HTAA+S +GK+
Sbjct: 367 VSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKL 426

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            T+G     GTF        G LGHG+      P  V   + ++ L+VSCG  HT A+++
Sbjct: 427 FTFG----DGTF--------GALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVID 474

Query: 422 YV 423
           ++
Sbjct: 475 FI 476



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 42/271 (15%)

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P  ++ ++ +  +  A G + +V VT  G++ SWG    G+LGHG ++ +         
Sbjct: 288 LPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADV--------- 338

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSL 283
             P++I  L    V + A G  H+  +  +G +Y +GD   +      G   +H     +
Sbjct: 339 SQPKVIDALSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREV 398

Query: 284 ISKLPYSEE--VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
           I ++       V CG +HT  ++S G+L+T+G    G LG G       P  V+      
Sbjct: 399 IGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVES-LKGL 457

Query: 342 PVDQVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
              +VSCG  HTAA+ +             GK+ TWG G              GQLGHG+
Sbjct: 458 RTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAG------------ERGQLGHGD 505

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           +   + P+ V+    V   QV+C  + T AL
Sbjct: 506 EEPRLVPSCVSMPAGV--CQVACAHSMTIAL 534


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L       + G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGV 238
           QAA G   S+ +    +VLS G    G+LG    Q   +           P  I+ LE +
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-----------PEPIQALETL 75

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVC 295
            V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V C
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG +          S GQL   G    V    P  V   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGSN----------SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L +
Sbjct: 244 GDAHTAVLTQ 253



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++  + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 162/361 (44%), Gaps = 32/361 (8%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L      C  R ++ T ++     WG    GRLG G+     RP +  +     
Sbjct: 250 LESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTV 309

Query: 73  LKALACGGAHTLFLTETGCVY--ATGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           +  ++CG  HT  +T +G ++    G  + G LG    + Y L P ++SG  +  +V+ +
Sbjct: 310 VDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWL-PKKVSGPLEGLQVLSV 368

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  HS+  T  G+LY +G  + G LG G +  + +  P +VE LSG  T + A G   
Sbjct: 369 ACGSWHSALTTSSGKLYTFGDGTFGVLGHGDR--ETLAYPKEVEALSGFKTIKVACGIWH 426

Query: 189 SVAV------TGGG----KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+      TG      K+ +WG G   RLGHG +   L          P+ ++ L   
Sbjct: 427 SAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRL---------VPKCVQALLEY 477

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVC 295
                A G   +  +  +GRV+  G  + +  L    +  ++P L+     SE   E+ C
Sbjct: 478 NFHQLACGHNMTVALATSGRVFTMGSSS-NGQLGNPKSDGKQPCLVQDRLASELVEEISC 536

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H  VLTS  E+YTWG   NG LG G +     P  V+    +  V  +SCG   T  
Sbjct: 537 GASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRKKPCLVEA-LKDRHVKSISCGSNFTTC 595

Query: 356 I 356
           I
Sbjct: 596 I 596



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 163/368 (44%), Gaps = 50/368 (13%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTG 131
           +  +ACG  H    T  G V+  G    G+LG   +   S  P  +  L   VV  IS G
Sbjct: 258 VNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADIS-RPKLVESLSLTVVDLISCG 316

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
             H+ A+T  G+L+ WG  S   G LG G + +  +P   KV   L G+     A G   
Sbjct: 317 EFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLP--KKVSGPLEGLQVLSVACGSWH 374

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S   T  GK+ ++G G  G LGHG         R T  Y P+ ++ L G K    A G  
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGD--------RETLAY-PKEVEALSGFKTIKVACGIW 425

Query: 249 HSACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYS-EE 292
           HSA I E          + ++Y +GD   +++    G+  + P L+ K     L Y+  +
Sbjct: 426 HSAAIVEVTNQTGANVMSKKLYTWGDGDKNRL----GHGDKEPRLVPKCVQALLEYNFHQ 481

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           + CG   T  L + G ++T GS+ NG LG    D    P  VQ   +   V+++SCG  H
Sbjct: 482 LACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDG-KQPCLVQDRLASELVEEISCGASH 540

Query: 353 -TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
            T   S  ++ TWG G +            G+LGHG+  D   P +V   ++     +SC
Sbjct: 541 VTVLTSRSEVYTWGMGAN------------GRLGHGDLKDRKKPCLVEALKDRHVKSISC 588

Query: 412 GFNHTGAL 419
           G N T  +
Sbjct: 589 GSNFTTCI 596



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 45/300 (15%)

Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           G++Y+WG+       S+G          V+ IP  +E    +   Q A G       T  
Sbjct: 216 GDVYVWGEVWTDVTPSDGHTSSSCSKVDVL-IPKPLESDVVLDVNQIACGTRHVALTTRQ 274

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG    GRLGHG ++ I           P+L++ L    V + + G  H+  +  
Sbjct: 275 GEVFTWGEEFGGRLGHGTDADI---------SRPKLVESLSLTVVDLISCGEFHTCAVTT 325

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
           +G ++ +GD + +  L   G       P  +S      +V+   CG +H+ + TS G+LY
Sbjct: 326 SGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLY 385

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-----------G 359
           T+G    G LG G  + L  P+ V+   S     +V+CG  H+AAI E            
Sbjct: 386 TFGDGTFGVLGHGDRETLAYPKEVEA-LSGFKTIKVACGIWHSAAIVEVTNQTGANVMSK 444

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           K+ TWG G  +            +LGHG+    + P  V         Q++CG N T AL
Sbjct: 445 KLYTWGDGDKN------------RLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVAL 492



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 91/198 (45%), Gaps = 17/198 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H A     G V+ +G+    ++         RP L+  L 
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  + + CG +HTC +T+ G+L+ WG  S   G LG G+      P++V GP     V 
Sbjct: 307 LTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVL 366

Query: 345 QVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            V+CG W      S GK+ T+G     GTF        G LGHG+     +P  V     
Sbjct: 367 SVACGSWHSALTTSSGKLYTFG----DGTF--------GVLGHGDRETLAYPKEVEALSG 414

Query: 404 VKALQVSCGFNHTGALLE 421
            K ++V+CG  H+ A++E
Sbjct: 415 FKTIKVACGIWHSAAIVE 432


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   L S C+++                                
Sbjct: 223 TP----------VRVAA---LQSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG GS + L SP  +     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE-KERVVEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                   TP ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 -------PTPIMV-EKERV-VEIAACHSTHTSAAKTQGGHVYMWG 311



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P   + ++K  V      + +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQETASIRKACV-FGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   +++
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV        V+Q+ C
Sbjct: 182 RVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRV-AALQSVCVNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG G+  + + PT +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGSKNNLLSPTPIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSTHTSA 299



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EAIYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V   ++V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/139 (36%), Positives = 75/139 (53%), Gaps = 13/139 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A +   +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGI-SENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG  S+N   S  P+ +   K+ VV+I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 265 LGTGSKNNLLSPTPIMVE--KERVVEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + V+P  T   C   +F
Sbjct: 317 --SVVLPHLTHFSCTDDVF 333


>gi|294816123|ref|ZP_06774766.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
 gi|294328722|gb|EFG10365.1| BNR repeat domain protein [Streptomyces clavuligerus ATCC 27064]
          Length = 527

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 166/358 (46%), Gaps = 34/358 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT------LFLTETGCVYATG 96
           WG    G+LG  ++  R+ P    A  K  ++ LA G   T      + L     V+  G
Sbjct: 155 WGANVTGQLGNATMIDRYAPTPIPALPKQDVQQLAAGADATSGSGFAVALLNDNTVWTWG 214

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE----LYMWGKNSN 152
            ND GQLG          P R+ GL   + Q++ G  H+ A+  +G+    ++ WG N +
Sbjct: 215 QNDKGQLGTGLVTKAIPVPGRVPGLNG-ITQVAAGSLHALALRNNGDPQDGVWAWGDNIH 273

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           GQLG      K +P+P  V+ L+G  T   A G E S+A+  GG +++WG    G+LG+ 
Sbjct: 274 GQLGDSTNVPKTVPVP--VQGLTGSGTIAVATGCEHSLALREGGTLMAWGNNDKGQLGND 331

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
                   L ST    P  +K L    V+I AAG   S     +G +  +G+    ++  
Sbjct: 332 T------ILLST---IPVEVKNLTSPVVEI-AAGCNFSLARLADGTIKAWGENGHGELGN 381

Query: 273 QEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
            +  ++  P  ++ LP   +E +V GG H+  L S   +Y WGSN+ G L  G+I+    
Sbjct: 382 GQTANSLTPVSVTGLPPGSAERIVAGGNHSYALYSDYRVYGWGSNDKGQLADGTIN---- 437

Query: 331 PERVQGPFSESP-VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQ 383
           P       S+ P V  ++ G  +  A+++G     GWG    G  G+ + D H+  GQ
Sbjct: 438 PRTQAMQASKLPKVTSIAAGKDYGIALTDGNQNIIGWGNNARGQLGSGTTDPHTLVGQ 495



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 126/301 (41%), Gaps = 49/301 (16%)

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS------V 190
           A+  D  +  WG N  GQLG      +  P P  +  L     +Q A G + +      V
Sbjct: 145 AVGHDPLVQSWGANVTGQLGNATMIDRYAPTP--IPALPKQDVQQLAAGADATSGSGFAV 202

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           A+     V +WG    G+LG G        L + +   P  +  L G+     AAG LH+
Sbjct: 203 ALLNDNTVWTWGQNDKGQLGTG--------LVTKAIPVPGRVPGLNGITQ--VAAGSLHA 252

Query: 251 ACIDENGR----VYIFGDRAVDKMLFQEGNHARRPSLISKLPY-------SEEVVCGGYH 299
             +  NG     V+ +GD     +  Q G+    P  +  +P        +  V  G  H
Sbjct: 253 LALRNNGDPQDGVWAWGD----NIHGQLGDSTNVPKTV-PVPVQGLTGSGTIAVATGCEH 307

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISE 358
           +  L  GG L  WG+N+ G LG  +I +   P  V+     SPV +++ G   + A +++
Sbjct: 308 SLALREGGTLMAWGNNDKGQLGNDTILLSTIPVEVKN--LTSPVVEIAAGCNFSLARLAD 365

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G I  WG         E+GH   G+LG+G   + + P  V       A ++  G NH+ A
Sbjct: 366 GTIKAWG---------ENGH---GELGNGQTANSLTPVSVTGLPPGSAERIVAGGNHSYA 413

Query: 419 L 419
           L
Sbjct: 414 L 414


>gi|194218802|ref|XP_001915749.1| PREDICTED: Williams-Beuren syndrome chromosomal region 16 protein
           homolog [Equus caballus]
          Length = 437

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 153/319 (47%), Gaps = 26/319 (8%)

Query: 56  LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSL 113
           LE    P+     ++  +  ++CG AH+L LT++  V++ G N +GQ G  + EN  YS 
Sbjct: 132 LEPSPIPLPLDRPQETRVLQVSCGRAHSLILTDSEGVFSLGNNSYGQCGRKVVENEIYSE 191

Query: 114 --EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
             +  R+     +VVQ++ G  HS  +T  GE+Y  G  ++GQ GLG  +    P     
Sbjct: 192 SHKVHRMRDFDGQVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYSITSTPTMLGG 251

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
           + L+G+   Q A   +  +AV+  G +  WG        + +   +     ST    PR 
Sbjct: 252 D-LAGVNVVQVATYGDCCLAVSADGGLFGWG--------NSEYLQLASVTDSTQVNVPRC 302

Query: 232 IKELEGV-KVKIAAAGFLHSACIDENGRVYIFGDRAVDK---MLFQEGNHARRPSLISKL 287
           +    GV KVK AA G    A ++E GRV+++G   + K   ++         PSL    
Sbjct: 303 LP-FSGVGKVKQAACGGTGCAVLNEEGRVFVWGYGILGKGPNLVETALPEMIPPSLFGLT 361

Query: 288 PYSEEVV-----CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ EV      CG  H   LT+ GEL+ WG N  GCLGIG ++  + P RV  P    P
Sbjct: 362 EFNPEVQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRVTMP--GEP 419

Query: 343 VDQVSCGWKHTAAISEGKI 361
           VD V+CG  H   +++  I
Sbjct: 420 VD-VACGVDHMVTLAKSFI 437


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 39/388 (10%)

Query: 42   LWGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKAL-ACGGAHTLFL-TETGCVYATGLN 98
            +WG  D  +LG G   S+ + P   S   +  LK +   GG+ +LF+ ++ G +YA G  
Sbjct: 2911 VWGLNDKEQLG-GLKGSKVKLPTYSSVLSQ--LKPIHISGGSKSLFIVSQDGKLYACGEG 2967

Query: 99   DFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQL 155
              G+LG+  N      P ++  L + VV+   + +G  H+ A+T+DG+++ WG+  +G+L
Sbjct: 2968 TNGRLGLGHNNNVP-TPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 3026

Query: 156  GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G G +    +  P  +E L     +  A G   S A+T  G++ +WG G  GRLGHG   
Sbjct: 3027 GHGNRV--TLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGD-- 3082

Query: 216  SILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQ 273
                   + ++  P+L+  L+G +V   A G     + C+ E G V+ +GD    K+   
Sbjct: 3083 -------NCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRG 3135

Query: 274  EGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
                   P  + +L      ++ CG   +  LT  GE++TWG  +   LG G+   +  P
Sbjct: 3136 GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKP 3195

Query: 332  ERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
              +QG      V  V+ G  H  A+++ G++  WG         ++ H   GQ G GN V
Sbjct: 3196 TPIQG-LRGKKVIHVAVGALHCLAVTDSGQVFAWG---------DNDH---GQQGSGNTV 3242

Query: 391  DYIHPTIVNFGENVKALQVSCGFNHTGA 418
                P +V   + V   +V+CG +H+ A
Sbjct: 3243 VNKKPNLVLGLDGVFVNRVACGSSHSVA 3270



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 157/346 (45%), Gaps = 37/346 (10%)

Query: 43   WGNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG G   SR + P  C A        +A GG  TL+ +T  G +YATG    
Sbjct: 3949 WGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIA-GGEQTLYAVTPDGKLYATGYGAG 4006

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G+LGI      S  P  +  L+  +++   +++G  H  A++ DGE++ WG+  +G+LG 
Sbjct: 4007 GRLGIGGTDSVS-TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGH 4065

Query: 158  GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
            G + +     P  +E LSGI     A G   S  +T  G VL+WG G  GRLGHG     
Sbjct: 4066 GNRDS--YDRPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQ 4123

Query: 218  LG----FLRST--------------------SEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            L      LR+T                       +P  I+ L G+ V     G   S  +
Sbjct: 4124 LQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVAL 4183

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G VY +G     ++     +H RRP  ++ L   +   +  G  H    +  GE++T
Sbjct: 4184 TRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFT 4243

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            WG N+ G LG G++  +  P  VQ       + +V CG  HT A+S
Sbjct: 4244 WGDNDEGQLGDGTVTAIQRPRLVQS-LQGKHIVKVICGSAHTLALS 4288



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 57/350 (16%)

Query: 92   VYATGLNDFGQLG----------ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVD 141
            V   GLND  QLG             ++   L+P+ ISG  K +  +S           D
Sbjct: 2909 VLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQ----------D 2958

Query: 142  GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVL 199
            G+LY  G+ +NG+LGLG      +P P +V  L+    K+ A+  G + ++A+T  GKV 
Sbjct: 2959 GKLYACGEGTNGRLGLGHN--NNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVF 3016

Query: 200  SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
            SWG G  G+LGHG         R T E  P+L++ L   +++  A G  HSA I  +G +
Sbjct: 3017 SWGEGEDGKLGHGN--------RVTLE-KPKLLESLRTKRIRDIACGSSHSAAITSSGEL 3067

Query: 260  YIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGY--HTCVLTSGGELYTWGSN 315
            Y +G     ++   +     +P L++ L      +V CG     T  LT  G +++WG  
Sbjct: 3068 YTWGLGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDG 3127

Query: 316  ENGCLGIGSID---VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
            + G LG G  +   V H  ER+ G      V Q+ CG + + A+++ G++ TWG G  + 
Sbjct: 3128 DFGKLGRGGSEGCSVPHQVERLNG----VGVVQIECGAQFSLALTKIGEVWTWGKGDYY- 3182

Query: 372  TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                       +LGHG D     PT +      K + V+ G  H  A+ +
Sbjct: 3183 -----------RLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTD 3221



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 122/247 (49%), Gaps = 21/247 (8%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A  C G H + L+  G VY+ G  + G+LG  +     + P +I+ L+K+V  I  G  +
Sbjct: 583 AAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEV-PTKIA-LEKQVTAIYAGASY 640

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+A++  GEL+ WG+ + G+LG G    K +P  T+V+ L        ALG     S+AV
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGNSDDKFVP--TQVQALKAYKVVDVALGSGDAHSMAV 698

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK-VKIAAAGFLHSA 251
           T GG + +WG G  G+LG+G           +   +P L  ++EGV  V    +G   S 
Sbjct: 699 TDGGLLFAWGDGDFGKLGNG-----------SCNGSP-LPVQIEGVSSVARIYSGSQFSV 746

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +  +G +Y +G     ++      H+  P L+  L   +  +V  G  H   LTS GEL
Sbjct: 747 ALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGEL 806

Query: 310 YTWGSNE 316
           Y WG N+
Sbjct: 807 YGWGRND 813



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 32/300 (10%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTG 131
           ++ +AC       +T +G +Y+          I  +   ++ P  + GL+   V+QI+  
Sbjct: 536 VRQVACTENSIYIVTTSGQLYS----------IHSSCAETVAPKLVEGLEGVSVIQIAAH 585

Query: 132 Y--HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
               H+ A++  GE+Y WG    G+LG G  A+K +P    +E  ++ I+      G   
Sbjct: 586 CEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKIALEKQVTAIYA-----GASY 640

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AG 246
           S AV+  G++ +WG G  GRLGHG          S  ++ P  ++ L+  KV   A  +G
Sbjct: 641 SAAVSSVGELFTWGRGTYGRLGHGN---------SDDKFVPTQVQALKAYKVVDVALGSG 691

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  + + G ++ +GD    K+     N +  P  I  +     +  G   +  L+  
Sbjct: 692 DAHSMAVTDGGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIYSGSQFSVALSYD 751

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G LY+WG    G LG G+ +  + P+ V     +  VD V+ G  H  A+ S G++  WG
Sbjct: 752 GTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD-VAVGSAHCLALTSSGELYGWG 810



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 6/162 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSL--KALACGGAHTLFLTETGCVYATGLNDF 100
           WG G YGRLG G+ + ++ P    A + + +   AL  G AH++ +T+ G ++A G  DF
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDF 712

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           G+LG     G  L P++I G+   V +I +G   S A++ DG LY WGK   G+LG G  
Sbjct: 713 GKLGNGSCNGSPL-PVQIEGVSS-VARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNS 770

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
                 +P  V  L G      A+G    +A+T  G++  WG
Sbjct: 771 EHS--NVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 111/224 (49%), Gaps = 19/224 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ GRLG G   S+  P    A EK  + A+  G +++  ++  G ++  G   +G+
Sbjct: 603 WGAGEGGRLGHGDTASKEVPTKI-ALEKQ-VTAIYAGASYSAAVSSVGELFTWGRGTYGR 660

Query: 103 LGISENIGYSLEPLRISGLKK-EVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   N      P ++  LK  +VV ++  +G  HS A+T  G L+ WG    G+LG G 
Sbjct: 661 LG-HGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNG- 718

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            +    P+P ++E +S +   +   G + SVA++  G + SWG G  GRLGHG       
Sbjct: 719 -SCNGSPLPVQIEGVSSV--ARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGN------ 769

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              S     P+L+  LEG K+   A G  H   +  +G +Y +G
Sbjct: 770 ---SEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWG 810



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 135/368 (36%), Gaps = 112/368 (30%)

Query: 144  LYMWGKNSNGQLGLGKKAAKV-IPIP---------------------------------- 168
            ++ WG N  GQLG G   +++ +P P                                  
Sbjct: 3946 IFGWGHNHRGQLG-GLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYG 4004

Query: 169  ----------------TKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
                            T VE L  +  K+ A+  G +  +A++  G+V SWG G  G+LG
Sbjct: 4005 AGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLG 4064

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            HG   S   + R      P+LI+ L G+ V   A G  HSACI   G V  +G     ++
Sbjct: 4065 HGNRDS---YDR------PKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRL 4115

Query: 271  LFQEGNHARRP--------------------SLISKLPYSE---------------EVVC 295
               +     +P                    SL  ++P                  +V C
Sbjct: 4116 GHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVEC 4175

Query: 296  GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
            G   +  LT  G +YTWG  +   LG G+ D +  P++V        +  ++ G  H  A
Sbjct: 4176 GSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAA-LQGKKIISIATGSLHCVA 4234

Query: 356  ISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
             S+ G++ TW            G +  GQLG G       P +V   +    ++V CG  
Sbjct: 4235 CSDSGEVFTW------------GDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSA 4282

Query: 415  HTGALLEY 422
            HT AL  Y
Sbjct: 4283 HTLALSTY 4290



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 86/169 (50%), Gaps = 18/169 (10%)

Query: 256  NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTWG 313
            + +V ++G    +++   +G+  + P+  S L   + + + GG  +  +++  G+LY  G
Sbjct: 2906 SSKVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIHISGGSKSLFIVSQDGKLYACG 2965

Query: 314  SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC--GWKHTAAIS-EGKILTWGWGGSH 370
               NG LG+G  + + +P +V    ++  V +V+   G KH  A++ +GK+ +WG G   
Sbjct: 2966 EGTNGRLGLGHNNNVPTPRQVPI-LNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEG--- 3021

Query: 371  GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                EDG     +LGHGN V    P ++      +   ++CG +H+ A+
Sbjct: 3022 ----EDG-----KLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAI 3061



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G  GRLG G+ E    P +  A E   +  +A G AH L LT +G +Y  G ND+ Q
Sbjct: 757 WGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQ 816

Query: 103 LGISENIGYSLEPL 116
           +  S   G S +P+
Sbjct: 817 ICPS---GVSRDPI 827


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG+I  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357


>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Papio anubis]
 gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
           protein 1 [Macaca fascicularis]
 gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
          Length = 531

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T D E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            LSG   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|255567172|ref|XP_002524567.1| cell cycle regulatory protein, putative [Ricinus communis]
 gi|223536120|gb|EEF37775.1| cell cycle regulatory protein, putative [Ricinus communis]
          Length = 441

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 198/442 (44%), Gaps = 70/442 (15%)

Query: 24  LGICKRWISSTLQRRFAAL-WGNGDYGRLGL-----GSLESRWRPVVCSAFEKHSLKALA 77
           L   +R ISS   R    + +G+G +G LGL     G     + P + S      +  + 
Sbjct: 15  LNATRRCISSFNHRDTIVMSFGDGSHGALGLPNSLTGLGTDAYEPTIVSGLPS-DIVGVT 73

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHH- 134
            G  H+L +T TG ++A G N+  QLG  I        EP R+ GL K  V I + Y   
Sbjct: 74  AGHYHSLAVTSTGQLWAWGRNNEAQLGRCIPAPRDTWNEPKRVEGLNK--VHILSAYASG 131

Query: 135 --SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             S+AI  DG L++WGK+  GQLGLGK   +   +P+K+E L+G    + + G+  ++A+
Sbjct: 132 VVSAAIANDGSLWVWGKSKRGQLGLGKGITEAF-VPSKIEALAGTKIAKVSFGWGHALAL 190

Query: 193 TGGGKVLSWGAGGSGRLG------------------------HGQESSILGFLRSTSE-- 226
           +  GK+  WG    GRLG                           E  +L  +   ++  
Sbjct: 191 SEEGKLFGWGYSADGRLGKIMGALEVSALDSNANQQVPKLMLEASERLVLEGMEKENDMP 250

Query: 227 --YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY-----IFGD--RAVDKM-LFQEGN 276
             + P L++EL G KV   A G  HS  +  +G +      I+G   RA  ++ LF    
Sbjct: 251 ILWDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDL 310

Query: 277 HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG-IGSIDVLHSPERVQ 335
           +    S+ + L +S   +C    +        + +WG N++  LG +G   +   P  ++
Sbjct: 311 NIHPSSIAAGLGHS-LAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGI---PLEIE 366

Query: 336 GPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIH 394
           G   E PV  VS G  H+ A+ S+G++  WG G              G+LG G+  D   
Sbjct: 367 GLAGEIPV-SVSGGRVHSIALTSKGEVWVWGCG------------KNGRLGLGSSSDEAE 413

Query: 395 PTIVNFGENVKALQVSCGFNHT 416
           P +++  E  + LQ+  GF+H 
Sbjct: 414 PILLDSLEGYEVLQIVSGFDHN 435



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 57/189 (30%)

Query: 60  WRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--------------- 104
           W P +        +  +ACG  H+L L   G + ++G N +GQLG               
Sbjct: 253 WDPCLVEELHGTKVVDIACGLDHSLVLCCDGTLLSSGSNIYGQLGRANHEIGLFPVDLNI 312

Query: 105 ----ISENIGYSLE-----------------------------------PLRISGLKKEV 125
               I+  +G+SL                                    PL I GL  E+
Sbjct: 313 HPSSIAAGLGHSLAICRAASSDAEGDARNIVSWGWNQSSQLGRLGPEGIPLEIEGLAGEI 372

Query: 126 -VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            V +S G  HS A+T  GE+++WG   NG+LGLG  + +  PI   ++ L G    Q   
Sbjct: 373 PVSVSGGRVHSIALTSKGEVWVWGCGKNGRLGLGSSSDEAEPI--LLDSLEGYEVLQIVS 430

Query: 185 GFEQSVAVT 193
           GF+ ++ + 
Sbjct: 431 GFDHNLVLA 439


>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
 gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
           OT]
          Length = 1419

 Score =  115 bits (287), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 108/354 (30%), Positives = 165/354 (46%), Gaps = 38/354 (10%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           +   WG+  YG+LG G+   R  PV      K    ++A GG H+L L +   V A G N
Sbjct: 521 YVMAWGSNTYGQLGDGTNIQRSTPVRVQGL-KGQASSVAAGGTHSLALLQDKSVAAWGNN 579

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           D GQLG       +     ++GL  ++V I+ G  HS A+  DG ++ WG NS+GQLG G
Sbjct: 580 DHGQLGDGSFTNRNTAA-TVNGLS-DIVGIAAGERHSLAVQSDGSVWAWGDNSSGQLGDG 637

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
               +  P+  KV+ LS + TK AA G + S+A+T  GKV +WG    G+LG G      
Sbjct: 638 TLKERSTPV--KVKGLSQV-TKIAA-GGDTSLAITADGKVWAWGNNQDGQLGDGT----- 688

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN-- 276
               + ++ TP L+  L  V     + G+ H   +  +G V+ +GD +  + +   G+  
Sbjct: 689 ----TNNQSTPVLVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNS--QSILGTGSAD 740

Query: 277 -HARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERV 334
            +   P+ +  L     +  G   +  +T+ G    WG N+   LG GS     S P ++
Sbjct: 741 AYCAVPTQVKGLSGVTAISAGNQFSLAMTNQGVAEAWGRNDFNQLGDGSAAKFESTPVQI 800

Query: 335 QGPFSESPVDQ-VSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           +       VDQ +S G  H      G + T  W          G+++ GQLG G
Sbjct: 801 KNMPLVPVVDQSISAGGYHALC---GTLGTRSW----------GYNASGQLGLG 841



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 91/310 (29%), Positives = 141/310 (45%), Gaps = 29/310 (9%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA 94
           LQ +  A WGN D+G+LG GS  +R      +      +  +A G  H+L +   G V+A
Sbjct: 568 LQDKSVAAWGNNDHGQLGDGSFTNRNTAATVNGLS--DIVGIAAGERHSLAVQSDGSVWA 625

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
            G N  GQLG    +     P+++ GL  +V +I+ G   S AIT DG+++ WG N +GQ
Sbjct: 626 WGDNSSGQLG-DGTLKERSTPVKVKGL-SQVTKIAAGGDTSLAITADGKVWAWGNNQDGQ 683

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G    +  P+   V  LS + T   ++G+   +A+   G V +WG      LG G  
Sbjct: 684 LGDGTTNNQSTPV--LVPGLSDVTT--VSVGWTHCLALKSDGGVWAWGDNSQSILGTGSA 739

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
            +            P  +K L GV     +AG   S  +   G    +G    +++   +
Sbjct: 740 DAYCA--------VPTQVKGLSGVTA--ISAGNQFSLAMTNQGVAEAWGRNDFNQL--GD 787

Query: 275 GNHAR---RPSLISKLPY----SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
           G+ A+    P  I  +P      + +  GGYH    T G    +WG N +G LG+G  + 
Sbjct: 788 GSAAKFESTPVQIKNMPLVPVVDQSISAGGYHALCGTLGTR--SWGYNASGQLGLGITEH 845

Query: 328 LHSPERVQGP 337
           +  PE +  P
Sbjct: 846 ISIPEAISSP 855



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 28/259 (10%)

Query: 128 ISTGYHHSSAITVDGELYM-WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           +S G  HS +    GE  M WG N+ GQLG G    +  P+  +V+ L G  +  AA G 
Sbjct: 508 VSAGDSHSLSA---GEYVMAWGSNTYGQLGDGTNIQRSTPV--RVQGLKGQASSVAA-GG 561

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
             S+A+     V +WG    G+LG G       F    +  T   + ++ G+     AAG
Sbjct: 562 THSLALLQDKSVAAWGNNDHGQLGDGS------FTNRNTAATVNGLSDIVGI-----AAG 610

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
             HS  +  +G V+ +GD +  ++          P  +  L    ++  GG  +  +T+ 
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKGLSQVTKIAAGGDTSLAITAD 670

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G+++ WG+N++G LG G+ +   +P  V G    S V  VS GW H  A+ S+G +  W 
Sbjct: 671 GKVWAWGNNQDGQLGDGTTNNQSTPVLVPG---LSDVTTVSVGWTHCLALKSDGGV--WA 725

Query: 366 WGGSH----GTFSEDGHSS 380
           WG +     GT S D + +
Sbjct: 726 WGDNSQSILGTGSADAYCA 744



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 86/286 (30%), Positives = 126/286 (44%), Gaps = 28/286 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG LG GS  +R  P    +     + A+A G ++ L L   G V+A G N  G 
Sbjct: 122 WGSNQYGELGDGSTTNRNSPAPVPSLS--GISAIATGYSYCLALKNDGTVWAWGSNQNGA 179

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P++ISGL   VV I+  YH S AI  DG ++ WG N  GQLG G    
Sbjct: 180 LGDGTTDDRK-TPVQISGLSG-VVSIAANYHSSYAIKSDGTVWAWGLNDQGQLGDGLSKD 237

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           + +PI T +  +  +       GF  +V    G     W  G           S+ G + 
Sbjct: 238 QWLPINTGLSNIKSLIPG----GFSLTVIKQDGS---LWQLG----------LSVNGSVS 280

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR-RP 281
           +  EYT   +  L    V  AAAG  +   I ++  V+ +G+       +   N    +P
Sbjct: 281 NDVEYTLVQVPGLS--HVVSAAAGQNNFMAILQDQTVWTWGNALPG---YGSMNTVTPQP 335

Query: 282 SLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
             +  L  +   V C G++   L + G ++ WG+N NG LG G+ D
Sbjct: 336 VQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKD 381



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 89/349 (25%), Positives = 142/349 (40%), Gaps = 43/349 (12%)

Query: 40  AALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
             +WG G  G LG    +S    V   A     + A++ GG   L L   G V++ G N 
Sbjct: 68  GTVWGWGT-GPLGNNDADSNSALVPVQAKNLTDVIAISAGGDVALALKNDGTVWSWGSNQ 126

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +G+LG       +  P  +  L   +  I+TGY +  A+  DG ++ WG N NG LG G 
Sbjct: 127 YGELGDGSTTNRN-SPAPVPSLSG-ISAIATGYSYCLALKNDGTVWAWGSNQNGALGDGT 184

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P+  ++  LSG+ +   A  +  S A+   G V +WG    G+LG G       
Sbjct: 185 TDDRKTPV--QISGLSGVVS--IAANYHSSYAIKSDGTVWAWGLNDQGQLGDG------- 233

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG-------DRAVDKMLF 272
              S  ++ P +   L  +K  I   G      I ++G ++  G          V+  L 
Sbjct: 234 --LSKDQWLP-INTGLSNIKSLI--PGGFSLTVIKQDGSLWQLGLSVNGSVSNDVEYTLV 288

Query: 273 QEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           Q          +  L +      G  +   +     ++TWG   N   G GS++ + +P+
Sbjct: 289 Q----------VPGLSHVVSAAAGQNNFMAILQDQTVWTWG---NALPGYGSMNTV-TPQ 334

Query: 333 RVQGPFSESPVDQVSC-GWKHTAAISEGKILTWG--WGGSHGTFSEDGH 378
            VQ          V+C GW   A  ++G +  WG    G  G  ++D H
Sbjct: 335 PVQVQGLSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKDNH 383



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 84/303 (27%), Positives = 131/303 (43%), Gaps = 38/303 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + A++   A+ L +   G V+  G    G      N   +L P++   L  +V+ IS G 
Sbjct: 51  ITAISANEAYALAMKSDGTVWGWGTGPLGNNDADSN--SALVPVQAKNLT-DVIAISAGG 107

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             + A+  DG ++ WG N  G+LG G    +  P P  V  LSGI     A G+   +A+
Sbjct: 108 DVALALKNDGTVWSWGSNQYGELGDGSTTNRNSPAP--VPSLSGI--SAIATGYSYCLAL 163

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V +WG+  +G LG G          +    TP  I  L GV V I AA +  S  
Sbjct: 164 KNDGTVWAWGSNQNGALGDGT---------TDDRKTPVQISGLSGV-VSI-AANYHSSYA 212

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS------EEVVCGGYHTCVLTSG 306
           I  +G V+ +G       L  +G      S    LP +      + ++ GG+   V+   
Sbjct: 213 IKSDGTVWAWG-------LNDQGQLGDGLSKDQWLPINTGLSNIKSLIPGGFSLTVIKQD 265

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           G L+  G + NG +   S DV ++  +V G    S V   + G  +  AI + + + W W
Sbjct: 266 GSLWQLGLSVNGSV---SNDVEYTLVQVPG---LSHVVSAAAGQNNFMAILQDQTV-WTW 318

Query: 367 GGS 369
           G +
Sbjct: 319 GNA 321



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 98/396 (24%), Positives = 163/396 (41%), Gaps = 79/396 (19%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LG G  + +W P+        ++K+L  GG     + + G ++  GL+  G 
Sbjct: 222 WGLNDQGQLGDGLSKDQWLPINTGL---SNIKSLIPGGFSLTVIKQDGSLWQLGLSVNGS 278

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
             +S ++ Y+L  +++ GL   VV  + G ++  AI  D  ++ WG   N   G G    
Sbjct: 279 --VSNDVEYTL--VQVPGLS-HVVSAAAGQNNFMAILQDQTVWTWG---NALPGYGSMNT 330

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            V P P +V+ LSG ++  A LG+   +A+   G V +WG   +G LG G + +     +
Sbjct: 331 -VTPQPVQVQGLSGTYSAVACLGW-YDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPSQ 388

Query: 223 STSEYTP--------RLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFGDRA--VDKM 270
           + ++ TP         L+  L  E   + I     +  +  +  G V +  D+   V   
Sbjct: 389 NFADKTPMAATVGNVSLVNTLYSEPYAITIRFTKPMLQSTFNTQGNVTLRDDQGQEVALD 448

Query: 271 LFQEGNHARRPSLISKLP-------------------------------------YSEEV 293
           L QEG    R  + +  P                                     +   V
Sbjct: 449 LTQEGPDLGRMLIKTVAPLSLGQHYTLHLANLMDLDGLTLPDYTYDFTVSLPFNTFQGGV 508

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT 353
             G  H+  L++G  +  WGSN  G LG G+     +P RVQG   ++    V+ G  H+
Sbjct: 509 SAGDSHS--LSAGEYVMAWGSNTYGQLGDGTNIQRSTPVRVQGLKGQA--SSVAAGGTHS 564

Query: 354 AAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            A+ + K +  W            G++  GQLG G+
Sbjct: 565 LALLQDKSVAAW------------GNNDHGQLGDGS 588



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 32/244 (13%)

Query: 179 TKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           T Q  +    S +++ G  V++WG+   G+LG G          +    TP  ++ L+G 
Sbjct: 503 TFQGGVSAGDSHSLSAGEYVMAWGSNTYGQLGDGT---------NIQRSTPVRVQGLKGQ 553

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCG 296
              +AA G  HS  + ++  V  +G+   D     +G+   R   + ++ L     +  G
Sbjct: 554 ASSVAAGG-THSLALLQDKSVAAWGNN--DHGQLGDGSFTNRNTAATVNGLSDIVGIAAG 610

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
             H+  + S G ++ WG N +G LG G++    +P +V+G    S V +++ G   + AI
Sbjct: 611 ERHSLAVQSDGSVWAWGDNSSGQLGDGTLKERSTPVKVKG---LSQVTKIAAGGDTSLAI 667

Query: 357 S-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
           + +GK+  W W          G++  GQLG G   +   P +V    +V    VS G+ H
Sbjct: 668 TADGKV--WAW----------GNNQDGQLGDGTTNNQSTPVLVPGLSDVTT--VSVGWTH 713

Query: 416 TGAL 419
             AL
Sbjct: 714 CLAL 717



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           ++A+   G V  WG   +G LG+    S        S   P   K L  V + I+A G +
Sbjct: 61  ALAMKSDGTVWGWG---TGPLGNNDADS-------NSALVPVQAKNLTDV-IAISAGGDV 109

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGE 308
             A +  +G V+ +G     ++      +   P+ +  L     +  G  +   L + G 
Sbjct: 110 ALA-LKNDGTVWSWGSNQYGELGDGSTTNRNSPAPVPSLSGISAIATGYSYCLALKNDGT 168

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWG 367
           ++ WGSN+NG LG G+ D   +P ++ G    S V  ++  +  + AI S+G +  W W 
Sbjct: 169 VWAWGSNQNGALGDGTTDDRKTPVQISG---LSGVVSIAANYHSSYAIKSDGTV--WAW- 222

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 416
                    G +  GQLG G   D   P  +N G  N+K+L +  GF+ T
Sbjct: 223 ---------GLNDQGQLGDGLSKDQWLP--INTGLSNIKSL-IPGGFSLT 260


>gi|307110133|gb|EFN58370.1| hypothetical protein CHLNCDRAFT_20698, partial [Chlorella
           variabilis]
          Length = 379

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 146/326 (44%), Gaps = 29/326 (8%)

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSS-AITVDGELYMWGKN 150
           V+A G+N+ GQLG+ E +         + +  +VV+   G   ++ AI  DG +  WG N
Sbjct: 1   VFAWGVNEDGQLGL-ERVQRPAAVGADNVIVAKVVEACLGDSRNTLAIGADGNVITWGWN 59

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           + G LG G +  +    P +V  L G+  KQAA+G    +A+   G+  +WG    G+  
Sbjct: 60  ARGTLGHGHREPQ--GKPQRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQCL 117

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +  IL             +K LEG+ VK  AAG +HS  + E G ++++G+   D  
Sbjct: 118 PRDKRDILA-----------PVKCLEGIAVKQVAAGGMHSLALTETGEIWMWGEPWGDFS 166

Query: 271 LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           +       R P  I       +V CG +H   L + GE +TWG N+ G LG G+      
Sbjct: 167 MTIN----RAPRRIDTTGDFVDVSCGAFHNLALNAAGECFTWGINDFGMLGNGTTSYATC 222

Query: 331 PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           PE+V G       D  + GW   A  +EG++  WG     G +   G      LG     
Sbjct: 223 PEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWG----RGEYGRLG------LGDRTGS 272

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHT 416
             + P  V   E  + ++ SCG  HT
Sbjct: 273 SKLRPQKVKTLEGHRVVEGSCGGTHT 298



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 28/286 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G LG G  E + +P   +  +   +K  A GG H L L +TG  +A G N++GQ
Sbjct: 56  WGWNARGTLGHGHREPQGKPQRVAGLQGVHIKQAAIGGWHVLALDDTGQCWAWGGNEYGQ 115

Query: 103 LGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
             +  +    L P++ + G+   V Q++ G  HS A+T  GE++MWG+        G  +
Sbjct: 116 C-LPRDKRDILAPVKCLEGIA--VKQVAAGGMHSLALTETGEIWMWGEP------WGDFS 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
             +   P +++  +G F   +   F  ++A+   G+  +WG    G LG+G         
Sbjct: 167 MTINRAPRRID-TTGDFVDVSCGAF-HNLALNAAGECFTWGINDFGMLGNG--------- 215

Query: 222 RSTSEYT-PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHA 278
            +TS  T P  +  LEGV +   +AG  HS  I   G VY++G     ++    + G+  
Sbjct: 216 -TTSYATCPEKVVGLEGVFIADVSAGGWHSMAISAEGEVYVWGRGEYGRLGLGDRTGSSK 274

Query: 279 RRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSNENG-CLG 321
            RP  +  L     V   CGG HT V+T  G  + WG    G C+G
Sbjct: 275 LRPQKVKTLEGHRVVEGSCGGTHTMVVTDEGRCFIWGRGAFGRCVG 320



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKE-VVQISTGYHH 134
           ++CG  H L L   G  +  G+NDFG LG +    Y+  P ++ GL+   +  +S G  H
Sbjct: 185 VSCGAFHNLALNAAGECFTWGINDFGMLG-NGTTSYATCPEKVVGLEGVFIADVSAGGWH 243

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S AI+ +GE+Y+WG+   G+LGLG +       P KV+ L G    + + G   ++ VT 
Sbjct: 244 SMAISAEGEVYVWGRGEYGRLGLGDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTMVVTD 303

Query: 195 GGKVLSWGAGGSGRL--GHGQESSIL 218
            G+   WG G  GR   G+ + SS L
Sbjct: 304 EGRCFIWGRGAFGRCVGGYARISSSL 329



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)

Query: 42  LWGNGDYGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           +WG G+YGRLGLG     S+ RP      E H +   +CGG HT+ +T+ G  +  G   
Sbjct: 255 VWGRGEYGRLGLGDRTGSSKLRPQKVKTLEGHRVVEGSCGGTHTMVVTDEGRCFIWGRGA 314

Query: 100 FGQ 102
           FG+
Sbjct: 315 FGR 317


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 15/274 (5%)

Query: 44  GNGDYGRLGLGSLESRWR-PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
             G  GR G      RW  P    A +      ++CG  H+L +   G V+A G    GQ
Sbjct: 51  SRGQLGRRG----APRWDLPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQ 106

Query: 103 LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ E    +  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+ 
Sbjct: 107 LGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEF 166

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
               P P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G  
Sbjct: 167 PSQ-PSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRN 219

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
                  P  I  L+ + V   + G  H+A + ++G+V+ FGD +  ++ +      R P
Sbjct: 220 VQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSPTPEKRGP 279

Query: 282 SLISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
            L+ ++     ++ CGG HT   + + G++ ++G
Sbjct: 280 QLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG 313



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-EPLR-ISGLKKEVVQISTGYHH 134
           A G  H L L     V++ G N  GQLG      + L EP++ +  LK ++V  S G  H
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G +  ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGVG-ELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQPSPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  I  L       + CG  HT VL+  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GRGPS 317



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 146/304 (48%), Gaps = 35/304 (11%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  H+  +  +  ++  G+NS GQLG  ++ A    +P  V+ L  +     +
Sbjct: 24  ELLQAASGERHALLLLTNSLVHSCGENSRGQLG--RRGAPRWDLPEPVQALKTLKFDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TPR I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEI--------NFTPRKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIG--SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +  L+  G  + WGSN  G L +   ++ V  +     G      V  +SCG +HTA +S
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLS 252

Query: 358 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSCGFN 414
           + GK+ T+            G +S GQLG+    +   P +V   E +  L  Q+ CG +
Sbjct: 253 QDGKVFTF------------GDNSSGQLGYSPTPEKRGPQLV---ERIDGLVSQIDCGGD 297

Query: 415 HTGA 418
           HT A
Sbjct: 298 HTIA 301



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 30/276 (10%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
           L L  +  +V    P  +  L  +     + G E +  ++  GKV ++G   SG+LG+  
Sbjct: 213 LALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQDGKVFTFGDNSSGQLGYSP 272

Query: 214 ESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQ 273
                G         P+L++ ++G+  +I   G    A +   G+V  FG          
Sbjct: 273 TPEKRG---------PQLVERIDGLVSQIDCGGDHTIAYVHTTGQVVSFG---------- 313

Query: 274 EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
                R PS  SK P   E +   +    L S  +L
Sbjct: 314 -----RGPSATSK-PTHPEALKENFDIRCLISADDL 343



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 14/129 (10%)

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH 352
           V CG  H+  +   G ++ WG+   G LG+G +  ++   R     +   + QVSCG  H
Sbjct: 80  VSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITTLNGIKIIQVSCGHYH 139

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVS 410
           + A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+
Sbjct: 140 SLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVA 187

Query: 411 CGFNHTGAL 419
            G  H+ AL
Sbjct: 188 AGGAHSFAL 196


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 144/289 (49%), Gaps = 23/289 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL LTE G VYA G N+ G
Sbjct: 103 MFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHTLVLTEEGKVYAAGGNNEG 162

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +  P+     + ++ Q+S G + S+A+TVDG L+MWG NS GQ+GL  K
Sbjct: 163 QLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGL--K 220

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               + +P +V    G      + G+  S  VT  G++ ++G    G+LG       L  
Sbjct: 221 NVPNVCVPHQVTV--GKPIAWISCGYYHSAFVTMEGELYTFGETECGKLG-------LPR 271

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +   P+L+  +    +++A  G  H+  + E   VY      FG   +   +F+  
Sbjct: 272 QLLMNHKVPQLVPGIPEKVIQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFIFETA 329

Query: 276 NHA-RRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                 P    K+ Y   + CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 330 EPKILEPIKDQKIIY---ISCGENHTALITDVGLMYTFGDGRHGKLGLG 375



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 160/349 (45%), Gaps = 43/349 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           LACG  HT  +T    +Y  G N++GQLG+      S +P  +  LK E V+ +  G +H
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVS-KPTCVKALKPEKVKFAACGRNH 143

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +  +T +G++Y  G N+ GQLGLG    +    P    C    FT     KQ + G   S
Sbjct: 144 TLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPI---CF---FTSQHQLKQLSAGSNTS 197

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G +  WG    G++G     ++    + T            G  +   + G+ H
Sbjct: 198 AALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTV-----------GKPIAWISCGYYH 246

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+        NH + P L+  +P    +V CGG HT VLT 
Sbjct: 247 SAFVTMEGELYTFGETECGKLGLPRQLLMNH-KVPQLVPGIPEKVIQVACGGGHTVVLTE 305

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +YT+G  + G LG+G+     +  ++  P  +  +  +SCG  HTA I++ G + T+
Sbjct: 306 KA-VYTFGLGQFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLMYTF 364

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCG 412
           G  G HG            LG  N  +   PT+  NF   +  L V+CG
Sbjct: 365 G-DGRHGKLG---------LGMENFTNQFIPTLCSNFLRFMVEL-VACG 402



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 170/367 (46%), Gaps = 38/367 (10%)

Query: 58  SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR 117
           +R  P V  A       AL  G    + + ++G V+      FG+   +ENI     P +
Sbjct: 26  NRVSPAVFPAQTNPPRFALGMGEPEEV-VPDSGAVFT-----FGKTKFAENI-----PSK 74

Query: 118 ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGI 177
                     ++ G  H++ IT + +LYM+G N+ GQLGLG ++   +  PT V+ L   
Sbjct: 75  FWFKNDIPTYLACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRS--TVSKPTCVKALKPE 132

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             K AA G   ++ +T  GKV + G    G+LG       LG     + + P      + 
Sbjct: 133 KVKFAACGRNHTLVLTEEGKVYAAGGNNEGQLG-------LGDTEDRNTFHPICFFTSQH 185

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
            ++K  +AG   SA +  +G ++++GD +  ++  +   +   P  ++       + CG 
Sbjct: 186 -QLKQLSAGSNTSAALTVDGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWISCGY 244

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAA 355
           YH+  +T  GELYT+G  E G LG+    +++   P+ V G   E  V QV+CG  HT  
Sbjct: 245 YHSAFVTMEGELYTFGETECGKLGLPRQLLMNHKVPQLVPG-IPEK-VIQVACGGGHTVV 302

Query: 356 ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFN 414
           ++E  + T+G G              GQLG G  + +   P I+   ++ K + +SCG N
Sbjct: 303 LTEKAVYTFGLG------------QFGQLGLGTFIFETAEPKILEPIKDQKIIYISCGEN 350

Query: 415 HTGALLE 421
           HT  + +
Sbjct: 351 HTALITD 357



 Score = 41.6 bits (96), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 14/75 (18%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +++ P +CS F +  ++ +ACGG H +       V+AT     
Sbjct: 364 FGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMI-------VFAT----- 411

Query: 101 GQLGISENIGYSLEP 115
            +LGI+E I     P
Sbjct: 412 PRLGIAEEIDEMYSP 426


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 176/387 (45%), Gaps = 39/387 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3848 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPIQLIGGEQTLFAVTADGKLYATGYGAG 3905

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LGI      S    LE ++   +KK  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3906 GRLGIGGTESVSTPTLLESIQHVFIKK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3963

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  +E L GI     A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3964 HGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSD--- 4018

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 4019 ------SEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 275  GNHARRPSLISKLPY--SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
             +  + P  I  L      +V CG   +  LT  G +YTWG  +   LG GS D +  P 
Sbjct: 4073 SDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPR 4132

Query: 333  RVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            +VQG      V  ++ G  H    +E G++ TW            G +  GQLG G    
Sbjct: 4133 QVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTW------------GDNDEGQLGDGTTNA 4179

Query: 392  YIHPTIVNFGENVKALQVSCGFNHTGA 418
               P +V   +  K  +V+CG  HT A
Sbjct: 4180 IQRPRLVAALQGKKVNRVACGSAHTLA 4206



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 20/311 (6%)

Query: 57   ESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
            ES   P +  + +   +K +A   GG H L L+  G VY+ G  + G+LG   N      
Sbjct: 3914 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLG-HGNRSPCDR 3972

Query: 115  PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
            P  I  L+  EVV ++ G  HS+ +T  G+LY WGK   G+LG      ++ P    VE 
Sbjct: 3973 PRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKP--KLVEV 4030

Query: 174  LSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G  +       G  Q++ +T    V SWG G  G+LG G          S     P  
Sbjct: 4031 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG---------SDGCKVPMK 4081

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
            I  L G+ V     G   S  + ++G VY +G     ++     +H RRP  +  L   +
Sbjct: 4082 IDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK 4141

Query: 292  --EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
               +  G  H    T  GE+YTWG N+ G LG G+ + +  P R+        V++V+CG
Sbjct: 4142 VIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRP-RLVAALQGKKVNRVACG 4200

Query: 350  WKHTAAISEGK 360
              HT A S  K
Sbjct: 4201 SAHTLAWSTSK 4211



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 139/296 (46%), Gaps = 32/296 (10%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLE-EPKVISAFSGKQGGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q++AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQTLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TENGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVIKVRCGSQFSIA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WGSN+  C    ++ V   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGSNDQ-CQHFDTLRVT-KPEPTALPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 146/318 (45%), Gaps = 39/318 (12%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+ C       +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLS- 175
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   S 
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG----DTLPLEEPKVISAFSG 547

Query: 176 ---GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
              G      A G   S A+T  G++ +WG G  GRLGHG          S  E  P L+
Sbjct: 548 KQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIPMLV 598

Query: 233 KELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
             L+G+KV   A  +G   +  + ENG+V+ +GD    K+     +  + P LI KL   
Sbjct: 599 AGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 291 E--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
           +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++G   +  +D V+ 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVID-VAA 717

Query: 349 GWKHTAAISE-GKILTWG 365
           G  H  A++E  ++ +WG
Sbjct: 718 GSTHCLALTEDSEVHSWG 735



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 134/297 (45%), Gaps = 42/297 (14%)

Query: 136  SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            SA T+  ++++WG N   QLG G K +K I +P+  E LS +   Q A G +   AVT  
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLG-GLKGSK-IKVPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 196  GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACI 253
            GKV + G   +GRLG G        L S +   PR I  L    VK  A  +G  H+  +
Sbjct: 3012 GKVYACGEATNGRLGLG--------LSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYT 311
              +G+V+ +G+    K+      +  +P LI  L      ++ CG  H+  LTS GELYT
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYT 3123

Query: 312  WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT---AAISEGKILTWGWGG 368
            WG  E G LG G       P+ V+       V QV+CG +     A   EG + +WG   
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHR-VIQVACGSRDAQTLALTDEGLVFSWG--- 3179

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL------QVSCGFNHTGAL 419
              G F        G+LG G           N  +N++ L      Q+ CG   + AL
Sbjct: 3180 -DGDF--------GKLGRGGSEG------CNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 118/229 (51%), Gaps = 21/229 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G   + A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + S+A+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G
Sbjct: 696 EHV---------RYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWG 735



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 118/242 (48%), Gaps = 19/242 (7%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +I+ L   VV+   + +G  H
Sbjct: 3000 GGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 3117

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 3118 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 3168

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 3169 LTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 311  TW 312
            TW
Sbjct: 3229 TW 3230



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 133/332 (40%), Gaps = 81/332 (24%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3843 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATG 3901

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F K+ A+  G +  +A++  G+V SWG    G+
Sbjct: 3902 YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3961

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+I+ L G++V   AAG  HSAC+   G +Y +G     
Sbjct: 3962 LGHGNRSPC---------DRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYG 4012

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      ++ CG     T  LT    +++WG  + G LG G 
Sbjct: 4013 RLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 4072

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
             D    P ++    +   V +V CG + + A+++ G + TWG G  H            +
Sbjct: 4073 SDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYH------------R 4119

Query: 384  LGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            LGHG+D     P  V   +  K + ++ G  H
Sbjct: 4120 LGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 4151



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGG--AHTLFLTETGCVYATGLNDF 100
           WG G+YGRLG GS E    P++ +  +   +  +ACG   A TL +TE G V++ G  D+
Sbjct: 576 WGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDY 635

Query: 101 GQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           G+LG   + G    P  I  L+  +V+++  G   S A+T DG++Y WGK  N +LG G 
Sbjct: 636 GKLGRGGSDGCK-TPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGT 694

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           +  + +  P  +E L G      A G    +A+T   +V SWG+ 
Sbjct: 695 E--EHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSN 737



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 3072 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 3131

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 3132 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 3189

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
              ++   IP  +E L+G    Q   G + S+A+T  G V +W
Sbjct: 3190 -GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTLPL---------EEPKVISAFSGKQGGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVIKVRCGSQFSIALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 14/155 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GDYG+LG G  +    P +    +   +  + CG   ++ LT+ G VY+ G  D  +
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQR 689

Query: 103 L--GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           L  G  E++ Y   P  + GL+ K+V+ ++ G  H  A+T D E++ WG N   Q     
Sbjct: 690 LGHGTEEHVRY---PKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTL 746

Query: 160 KAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVA 191
           +  K  P PT    L G+ TK     A G  QS A
Sbjct: 747 RVTK--PEPT---ALPGLDTKHIVGIACGPAQSFA 776



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 18/121 (14%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP----VDQVSCGWKH 352
           G+H   L + GE+Y+WG  + G LG G    L  P +V   FS       V  ++CG  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEP-KVISAFSGKQGGKHVVHIACGSTY 563

Query: 353 TAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           +AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+C
Sbjct: 564 SAAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVAC 611

Query: 412 G 412
           G
Sbjct: 612 G 612


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 85  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 143

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 144 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 201

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 202 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 252

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 253 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 310

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 311 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 344



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 39  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 97

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 98  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 157

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 158 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 207

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 208 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 267

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 268 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 326

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 327 SAHTSAAKTQGGHVYMWG 344



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 71  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 121

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 122 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 181

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 182 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 241

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 242 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 283



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 71  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 126

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 127 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 178

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 179 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 234

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG+I  WG  
Sbjct: 235 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG-- 291

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 292 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 332



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 237 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 296

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 297 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 349

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 350 --SVILPHHTHFCCTDDVF 366


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
           + G    G LG G  +S   P          + +L+ G G H + +T  G VY+ G N +
Sbjct: 44  VMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            QLG + +   +L P ++S   + K+ + ++ G HHS  +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162

Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             A +  PIP KV  CL        A G   S+AV   G+V +WG  G+G+LG G     
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGS---- 216

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S ++ TP  I  L+G++V+    G+ H+  + + G +Y +G  +  ++    GN 
Sbjct: 217 -----SGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269

Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
           + +   +  +   E +V    C   HT    S  G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 134/297 (45%), Gaps = 25/297 (8%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L+LT+   V+  G N  G LG  +     LEP RI  L  K +V +S G   H  
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-LEPRRIDMLSGKRIVSLSYGSGPHVV 87

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
            +T DGE+Y WG N+  QLG G     + P        + +  K+A   A G   S+ +T
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
             G+V +WG   SG++G G          + ++  PR +   L+   V   A G + S  
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           + +NG VY +G     ++      +   P  I+ L     E+VVCG  HT  LT  G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
            WG+N  G LG G+      P +V     E  V+  +C   HT+A     G++  WG
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 26/285 (9%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E+++ G NS+G LG G   A+ I  P +++ LSG      + G     V VT  G
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGD--AQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG     +LG+G  +  L    S  + +  LI +    K    A G  HS  +  +
Sbjct: 94  EVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMVLTCD 145

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      +   P  ++    ++ V+   CG   +  +   GE+Y WG
Sbjct: 146 GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWG 205

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
            N NG LG+GS     +P R+        V+QV CG+ HT A+++  ++ + WG      
Sbjct: 206 YNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVM-YAWGA----- 258

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                +S GQLG GN  +  +P  V   +       +C  +HT A
Sbjct: 259 -----NSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 110/258 (42%), Gaps = 40/258 (15%)

Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           Q  L F Q   V G G          +V   G   SG LG G   SIL          PR
Sbjct: 15  QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIL---------EPR 65

Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
            I  L G + V ++     H   +  +G VY +G  A  ++     N A  P     +LI
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           +K   S  V CG +H+ VLT  GE+Y WG N +G +G GS      P +V        V 
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 345 QVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            ++CG   + A +  G++  WG+ G+            GQLG G+  +   P  +   + 
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQPTPCRIAALQG 231

Query: 404 VKALQVSCGFNHTGALLE 421
           ++  QV CG+ HT AL +
Sbjct: 232 IRVEQVVCGYAHTLALTD 249



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLGS  ++  P   +A +   ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++   K+ +V+I+  +  H S+A +  G++YMWG+   GQ      
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315

Query: 161 AAKVIPIPTKVECLSGIF 178
            + + P  T   C   +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 19/267 (7%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
             AL+ G  H   +T+TG VY  G   +GQLG  +++   + P  +  +K EV  +S G+
Sbjct: 275 FSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVD-KIIPQPVPRIKGEVKSVSAGF 333

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           +H+ A+T  G L+ WG    G+LG    A ++IP         G+    A  G   ++ +
Sbjct: 334 YHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVL 393

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G+V S+G+G SGRLGHG ++          +++P  +  LE  +    AAGF HS  
Sbjct: 394 NRRGQVFSFGSGDSGRLGHGNDN---------DQWSPTFLSALESERCVSIAAGFAHSVA 444

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE----EVVCGGYHTCVLTSGGE 308
           + + G++Y +G   + ++     +    P  ++ + +       V  G  HTC+  S G 
Sbjct: 445 LTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGS 504

Query: 309 LYTWGSNENGCLGIGS-----IDVLHS 330
           L T G   +G +  GS     +D LH+
Sbjct: 505 LITLGRVSHGRMAEGSCAQDMLDTLHT 531



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 32/234 (13%)

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
           AVT  G V +WG G  G+LGHG +           +  P+ +  ++G +VK  +AGF H+
Sbjct: 287 AVTDTGLVYTWGQGRYGQLGHGDD---------VDKIIPQPVPRIKG-EVKSVSAGFYHT 336

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSEEVVCGGYHTCVLTS 305
             +  +G ++ +GD    K+   +      P+L++      +P +     GG HT VL  
Sbjct: 337 VAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAA-AQAGGSHTLVLNR 395

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
            G+++++GS ++G LG G+ +   SP  +    SE  V  ++ G+ H+ A+++ G+I TW
Sbjct: 396 RGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVS-IAAGFAHSVALTDQGQIYTW 454

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF--GENVKALQVSCGFNHT 416
           G G              G+LGHG+D D + P  +     + +KA+ V+ G  HT
Sbjct: 455 GCG------------KLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHT 496



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G YG+LG G    +  P       K  +K+++ G  HT+ +T  G ++  G    G+
Sbjct: 297 WGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSAGFYHTVAVTHHGALFTWGDGKEGK 355

Query: 103 LGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG ++N    L P  ++   +    V     G  H+  +   G+++ +G   +G+LG G 
Sbjct: 356 LGHNDN-AQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGN 414

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +    PT +  L        A GF  SVA+T  G++ +WG G  GRLGHG +S    
Sbjct: 415 DNDQW--SPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDS---- 468

Query: 220 FLRSTSEYTPRLIKEL--EGVKVKIAAAGFLHSACIDENGRVYIFG 263
                 E  PR +  +  + +K    AAG  H+      G +   G
Sbjct: 469 -----DEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLG 509



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 33/185 (17%)

Query: 249 HSACIDENGRVYIFGD---------RAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           H A + + G VY +G            VDK++ Q       P +  ++   + V  G YH
Sbjct: 284 HCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQP-----VPRIKGEV---KSVSAGFYH 335

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE--SPVDQVSCGWKHTAAIS 357
           T  +T  G L+TWG  + G LG         P  V   F E   PV     G  HT  ++
Sbjct: 336 TVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAA-FIEWGMPVAAAQAGGSHTLVLN 394

Query: 358 E-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
             G++ ++G G S            G+LGHGND D   PT ++  E+ + + ++ GF H+
Sbjct: 395 RRGQVFSFGSGDS------------GRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHS 442

Query: 417 GALLE 421
            AL +
Sbjct: 443 VALTD 447



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 4/126 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           +G+GD GRLG G+   +W P   SA E     ++A G AH++ LT+ G +Y  G    G+
Sbjct: 402 FGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGR 461

Query: 103 LGISENIGYSLEPLRISGLKKEVVQ---ISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           LG   +    L P +++ +  + ++   ++ G  H+     +G L   G+ S+G++  G 
Sbjct: 462 LGHGSDSDEVL-PRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGS 520

Query: 160 KAAKVI 165
            A  ++
Sbjct: 521 CAQDML 526


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 48/389 (12%)

Query: 52  GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY 111
           G GS      P    A     + ++ACG  H   +T+ G V+  G    G+LG   ++  
Sbjct: 261 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDV 320

Query: 112 SLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQLGLGKKAAKVIPI 167
           S   L   ++G+  E+V  + G  H+ A+T+ GELY WG +  S G +G     +  +P 
Sbjct: 321 SEPQLVQALAGVNTELV--ACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 378

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
                 L G+     A G   +  V+  G++ ++G G  G LGHG + ++          
Sbjct: 379 RMSSP-LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLA--------- 428

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEG 275
            P+ ++ L+G+K   AA G  H+A + E            +G+++ +GD   DK     G
Sbjct: 429 IPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG--DKYRLGHG 486

Query: 276 NHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +  ++  P+ ++ L  Y+  +V CG   T  LT+ G ++T GS   G LG    D    P
Sbjct: 487 DKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADG-KVP 545

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V G  + + V+++ CG  H AA+S + +I TWG G +            G+LGHG+  
Sbjct: 546 GMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGAN------------GRLGHGDVE 593

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           D   PT+V    + +   V+CG + T  +
Sbjct: 594 DRTAPTLVEALRDKQVKTVACGSSFTAVI 622



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF-- 100
           WG    GRLG G       P +  A    + + +ACG  HT  +T +G +Y  G +    
Sbjct: 304 WGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVTLSGELYTWGADAQSG 363

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G +G S  + + + P R+S   +   +  I+ G  H++ ++  G+L+ +G  + G LG G
Sbjct: 364 GLVGHSNPVSHWM-PKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHG 422

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            K  + + IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 423 DK--RNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDK 480

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            RLGHG +   L          P  +  L     +  A G   +  +  +GRV+  G   
Sbjct: 481 YRLGHGDKEQKL---------VPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGS-- 529

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    K+P          + EE+ CG +H   L+S  E+YTWG   
Sbjct: 530 --TIYGQLGN----PKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGA 583

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G ++   +P  V+    +  V  V+CG   TA I
Sbjct: 584 NGRLGHGDVEDRTAPTLVEA-LRDKQVKTVACGSSFTAVI 622



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+A + + G V+ +G+    ++          P L+  L 
Sbjct: 271 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 330

Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSN-ENGCLGIGSIDVLH-SPERVQGPFSESPVD 344
              +E V CG +HTC +T  GELYTWG++ ++G L   S  V H  P+R+  P     + 
Sbjct: 331 GVNTELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 390

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            ++CG  HTA +S  G++ T+G     GTF        G LGHG+  +   P  V   + 
Sbjct: 391 SIACGAWHTALVSSAGQLFTFG----DGTF--------GVLGHGDKRNLAIPKEVESLKG 438

Query: 404 VKALQVSCGFNHTGALLEYV 423
           +K ++ +CG  HT A++E +
Sbjct: 439 LKTVRAACGIWHTAAVVEVI 458


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 175 TGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 235 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 293

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 294 SAHTSAAKTQGGHVYMWG 311



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 38  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 88

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 89  LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 149 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYN 208

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 209 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 250



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--IACGQMCSMAVVDTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG+I  WG  
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHHTHFCCTDDVF 333


>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
          Length = 1028

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L       + G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLA------LSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+ ++     ++ CG YHT   + + G++ ++G
Sbjct: 281 LVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 144/305 (47%), Gaps = 28/305 (9%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSP---ERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTW 364
           +T+G N +G LG         P   ER+ G      V Q+ CG  HT A   + G+++++
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQVVSF 312

Query: 365 GWGGS 369
           G G S
Sbjct: 313 GHGPS 317



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 41/307 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 GFNHTGA 418
           G  HT A
Sbjct: 295 GSYHTLA 301



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  +I    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFG 313



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 85/168 (50%), Gaps = 6/168 (3%)

Query: 43  WGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG   +G+LGLG    S+  P    + E   L  +A GGAH+  L+  G  +  G N  G
Sbjct: 152 WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAG 211

Query: 102 QLGIS-ENIGY-SLEPLRISGLKKE-VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QL +S  N+   S +PL +  LK   VV IS G  H++ +T DG+++ +G N +GQLG  
Sbjct: 212 QLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYS 271

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
               K    P  VE + G+ ++     +     V   G+V+S+G G S
Sbjct: 272 PTPEKR--GPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 111/250 (44%), Gaps = 32/250 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH--GQESSILGFLRSTSEYTPRLIKELEGV 238
           QAA G   S+ +    +VLS G    G+LG    Q   +           P  I+ LE +
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL-----------PEPIQALETL 75

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVC 295
            V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V C
Sbjct: 76  IVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSC 135

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           G YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ QV+ G  H+ 
Sbjct: 136 GHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSF 194

Query: 355 AISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSC 411
           A+S     ++GWG +          S GQL   G    V    P  V   +N+  + +SC
Sbjct: 195 ALSLCGT-SFGWGSN----------SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISC 243

Query: 412 GFNHTGALLE 421
           G  HT  L +
Sbjct: 244 GDAHTAVLTQ 253



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++  + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT-LNDIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 153/331 (46%), Gaps = 31/331 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           W     GRLG G      RP +       ++  +ACG  HT  ++ +G ++    G+++ 
Sbjct: 294 WEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNV 353

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+SG  +  +V+ ++ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 354 GLLGHGSDLSHWI-PKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG 412

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV----------TGGGKVLSWGAGGSGR 208
            + +  +  P +V+ LSG+ T + A G   +VA+          T   K+ +WG G   R
Sbjct: 413 DRES--VSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNR 470

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  +  
Sbjct: 471 LGHGNKETYL---------LPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTS-H 520

Query: 269 KMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
             L    +  + P L+       + EE+ CG +H  VLTS  E++TWG   NG LG G  
Sbjct: 521 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 580

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           D   +P  V+    E  V  +SCG   T++I
Sbjct: 581 DDRKTPTLVEA-LRERHVKSISCGSNFTSSI 610



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 156/363 (42%), Gaps = 46/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +ACG  H   +T  G V+       G+LG    +      L        +  ++ G +H+
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHT 334

Query: 136 SAITVDGELYMWGK--NSNGQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQSVA 191
            A++  G+L+ WG   ++ G LG G   +  IP  +   VE   G+     A G   S  
Sbjct: 335 CAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVE---GLQVLSVACGTWHSAL 391

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            T  GK+ ++G G  G LGHG   S+           P+ +K L G+K    A G  H+ 
Sbjct: 392 ATANGKLFTFGDGAFGVLGHGDRESV---------SYPKEVKMLSGLKTLKVACGVWHTV 442

Query: 252 CIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
            I E          + +++ +GD   DK     GN      P+ +S L  Y+  ++ CG 
Sbjct: 443 AIVEVMNQTGTSTSSRKLFTWGDG--DKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGH 500

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G ++T G   +G LG  + D    P  VQ       V+++SCG  H A + 
Sbjct: 501 TFTVALTTSGHVFTMGGTSHGQLGSSNSDG-KLPCLVQDRLVGEFVEEISCGDHHVAVLT 559

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G            S G+LGHG+  D   PT+V          +SCG N T
Sbjct: 560 SRSEVFTWGKG------------SNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFT 607

Query: 417 GAL 419
            ++
Sbjct: 608 SSI 610



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 134/313 (42%), Gaps = 45/313 (14%)

Query: 129 STGYHHSSAITVDGELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           STG      I   G++Y+WG+      + +G +        V+ IP  +E    +   Q 
Sbjct: 217 STGTSGPDDIESLGDVYVWGEVWSDGISPDGVVNSTTVKIDVL-IPKPLESNVVLDVHQI 275

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G      VT  G+V +W     GRLGHG +  +           P+L++ L    +  
Sbjct: 276 ACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVC---------RPKLVEFLALTNIDF 326

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGG 297
            A G  H+  +  +G ++ +GD   +  L   G+      P  +S      +V+   CG 
Sbjct: 327 VACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGT 386

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           +H+ + T+ G+L+T+G    G LG G  + +  P+ V+   S     +V+CG  HT AI 
Sbjct: 387 WHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKM-LSGLKTLKVACGVWHTVAIV 445

Query: 358 E-----------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
           E            K+ TWG G  +            +LGHGN   Y+ PT V+   +   
Sbjct: 446 EVMNQTGTSTSSRKLFTWGDGDKN------------RLGHGNKETYLLPTCVSSLIDYNF 493

Query: 407 LQVSCGFNHTGAL 419
            Q++CG   T AL
Sbjct: 494 NQIACGHTFTVAL 506



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 23/215 (10%)

Query: 219 GFLRSTSEYTPRLI-KELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
           G + ST+     LI K LE    + V   A G  H A +   G V+ + + A  ++    
Sbjct: 247 GVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGI 306

Query: 275 GNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGS--NENGCLGIGSIDVLH- 329
                RP L+  L  +  + V CG YHTC +++ G+L+TWG   +  G LG GS D+ H 
Sbjct: 307 QVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGS-DLSHW 365

Query: 330 SPERVQGPFSESPVDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGN 388
            P+RV GP     V  V+CG  H+A A + GK+ T+G G            + G LGHG+
Sbjct: 366 IPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFGDG------------AFGVLGHGD 413

Query: 389 DVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
                +P  V     +K L+V+CG  HT A++E +
Sbjct: 414 RESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVM 448



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 83/164 (50%), Gaps = 7/164 (4%)

Query: 32  SSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGC 91
           +ST  R+    WG+GD  RLG G+ E+   P   S+   ++   +ACG   T+ LT +G 
Sbjct: 453 TSTSSRKLFT-WGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGH 511

Query: 92  VYATGLNDFGQLGISENIGYSLEPLRISGLKKEVV-QISTGYHHSSAITVDGELYMWGKN 150
           V+  G    GQLG S + G  L  L    L  E V +IS G HH + +T   E++ WGK 
Sbjct: 512 VFTMGGTSHGQLGSSNSDG-KLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKG 570

Query: 151 SNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
           SNG+LG G K  +    PT VE L     K  + G  F  S+ +
Sbjct: 571 SNGRLGHGDKDDR--KTPTLVEALRERHVKSISCGSNFTSSICI 612


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 180/389 (46%), Gaps = 48/389 (12%)

Query: 52  GLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY 111
           G GS      P    A     + ++ACG  H   +T+ G V+  G    G+LG   ++  
Sbjct: 270 GAGSRVDSLVPKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDV 329

Query: 112 SLEPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKN--SNGQLGLGKKAAKVIPI 167
           S   L   ++G+  E+V  + G  H+ A+T+ GELY WG +  S G +G     +  +P 
Sbjct: 330 SEPQLVQALAGVNAELV--ACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPK 387

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
                 L G+     A G   +  V+  G++ ++G G  G LGHG + ++          
Sbjct: 388 RMSSP-LEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHGDKRNLA--------- 437

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDE------------NGRVYIFGDRAVDKMLFQEG 275
            P+ ++ L+G+K   AA G  H+A + E            +G+++ +GD   DK     G
Sbjct: 438 IPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDG--DKYRLGHG 495

Query: 276 NHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
           +  ++  P+ ++ L  Y+  +V CG   T  LT+ G ++T GS   G LG    D    P
Sbjct: 496 DKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGSTIYGQLGNPKADG-KVP 554

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
             V G  + + V+++ CG  H AA+S + +I TWG G +            G+LGHG+  
Sbjct: 555 GMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGAN------------GRLGHGDVE 602

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           D   PT+V    + +   V+CG + T  +
Sbjct: 603 DRTAPTLVEALRDKQVKTVACGSSFTAVI 631



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 150/340 (44%), Gaps = 47/340 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN--DF 100
           WG    GRLG G       P +  A    + + +ACG  HT  +T +G +Y  G +    
Sbjct: 313 WGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACGDFHTCAVTLSGELYTWGADAQSG 372

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G +G S  + + + P R+S   +   +  I+ G  H++ ++  G+L+ +G  + G LG G
Sbjct: 373 GLVGHSNPVSHWM-PKRMSSPLEGVRISSIACGAWHTALVSSAGQLFTFGDGTFGVLGHG 431

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            K  + + IP +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 432 DK--RNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSSGKLFTWGDGDK 489

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            RLGHG +   L          P  +  L     +  A G   +  +  +GRV+  G   
Sbjct: 490 YRLGHGDKEQKL---------VPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGS-- 538

Query: 267 VDKMLFQEGNHARRPSLISKLP----------YSEEVVCGGYHTCVLTSGGELYTWGSNE 316
              +  Q GN    P    K+P          + EE+ CG +H   L+S  E+YTWG   
Sbjct: 539 --TIYGQLGN----PKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGA 592

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           NG LG G ++   +P  V+    +  V  V+CG   TA I
Sbjct: 593 NGRLGHGDVEDRTAPTLVEA-LRDKQVKTVACGSSFTAVI 631



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 100/200 (50%), Gaps = 17/200 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V   A G  H+A + + G V+ +G+    ++          P L+  L 
Sbjct: 280 PKALQAAVVLDVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALA 339

Query: 289 --YSEEVVCGGYHTCVLTSGGELYTWGSN-ENGCLGIGSIDVLH-SPERVQGPFSESPVD 344
              +E V CG +HTC +T  GELYTWG++ ++G L   S  V H  P+R+  P     + 
Sbjct: 340 GVNAELVACGDFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRIS 399

Query: 345 QVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            ++CG  HTA +S  G++ T+G     GTF        G LGHG+  +   P  V   + 
Sbjct: 400 SIACGAWHTALVSSAGQLFTFG----DGTF--------GVLGHGDKRNLAIPKEVESLKG 447

Query: 404 VKALQVSCGFNHTGALLEYV 423
           +K ++ +CG  HT A++E +
Sbjct: 448 LKTVRAACGIWHTAAVVEVI 467


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 170/372 (45%), Gaps = 59/372 (15%)

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGY--SLEPLRISGLKKE 124
           E  S+ ++  GG  +  L   G V+ TG N+ GQLG    ++  Y   ++ L       +
Sbjct: 32  ESTSVVSINAGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY------D 85

Query: 125 VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
           VV + +   H+ AIT  G ++ WG NS G++  G    K I  P ++  L  I   Q + 
Sbjct: 86  VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITEG---GKNIARPVQINGLKDIV--QVST 140

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           G   S+A+   G V SWG    G+LG+G  Q+SSI           P  ++ L  + V I
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-----------PTKVEFLSNI-VAI 188

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
            A G  HS  +  +G+V+ +G     ++   E   +  P L+  L   E +  G  H+  
Sbjct: 189 EA-GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLA 247

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLH------------SPERVQGPFSESPVDQVSCGW 350
           L   G ++ WG N NG +G GS +V               P ++ G + +  V QVS G 
Sbjct: 248 LDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGK--VKQVSAGI 305

Query: 351 KHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
           KH+ A++E G++  WGW            +  GQLG+G+  D   P   N G ++  + +
Sbjct: 306 KHSTALTENGEVYAWGW------------NEYGQLGNGSMKDSKVPLRNNVGRSI--IDI 351

Query: 410 SCGFNHTGALLE 421
             G  H+ A+ E
Sbjct: 352 ETGSYHSFAVDE 363



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 26/275 (9%)

Query: 61  RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG 120
           RPV  +  +   +  ++ G  H+L L ++G V++ G N +GQLG   N   S+ P ++  
Sbjct: 125 RPVQINGLK--DIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSI-PTKVEF 181

Query: 121 LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTK 180
           L   +V I  G  HS A++ DG+++ WG+N  GQLG G+       IP  V+ L  I  +
Sbjct: 182 LSN-IVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKS--NIPRLVKNLENI--E 236

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES--SILGFLRSTSEYT-PRLIKELEG 237
             A G   S+A+   G + +WG   +G++G G  +     G LR     T P  +  L G
Sbjct: 237 MIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG 296

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE------ 291
            KVK  +AG  HS  + ENG VY +G     ++    GN + + S   K+P         
Sbjct: 297 -KVKQVSAGIKHSTALTENGEVYAWGWNEYGQL----GNGSMKDS---KVPLRNNVGRSI 348

Query: 292 -EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++  G YH+  +   G +Y WG    G LG G+ 
Sbjct: 349 IDIETGSYHSFAVDESGVIYAWGDATYGQLGDGTF 383



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 87/181 (48%), Gaps = 17/181 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  ++G+LG G  E    P +    E  +++ +A G  H+L L   G ++A G N  GQ
Sbjct: 207 WGRNEFGQLGNGETEKSNIPRLVKNLE--NIEMIAGGDNHSLALDHDGAIWAWGYNSNGQ 264

Query: 103 LGISENIGYS-----------LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNS 151
           +G   +  Y             EP++++GL  +V Q+S G  HS+A+T +GE+Y WG N 
Sbjct: 265 IGDGSSNVYEKDGQLREKRNKTEPVKLNGLYGKVKQVSAGIKHSTALTENGEVYAWGWNE 324

Query: 152 NGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            GQLG G      +P+   V    G        G   S AV   G + +WG    G+LG 
Sbjct: 325 YGQLGNGSMKDSKVPLRNNV----GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLGD 380

Query: 212 G 212
           G
Sbjct: 381 G 381


>gi|284032915|ref|YP_003382846.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
           17836]
 gi|283812208|gb|ADB34047.1| regulator of chromosome condensation RCC1 [Kribbella flavida DSM
           17836]
          Length = 666

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 152/345 (44%), Gaps = 36/345 (10%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSA 137
            G  H++ L   G V+  G N+ GQLG          P+++ GL   VV I+ G++HS A
Sbjct: 66  AGREHSIALRSDGTVWTWGFNEMGQLGDGTATNRP-APVQVGGLSG-VVDIAGGHYHSLA 123

Query: 138 ITVDGELYMWGKNSNGQLGLG-KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           +  DG +  WG NS GQLG G   +A+  P+   V  LSG+     A G + S AV   G
Sbjct: 124 LLADGTVRAWGYNSFGQLGNGATTSAQRTPV--AVTPLSGVL--AIAGGRDMSYAVRSDG 179

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            V  WG   +G+LG G          +T    P  +  L G+     + G  H   +  +
Sbjct: 180 TVWGWGLNTTGQLGDGT---------TTMRTRPVRVGSLAGITA--ISGGRDHGLAVRSD 228

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           G V+ +GD    ++      +   P  +  +  + EV  G YH+    +GG L +WG N 
Sbjct: 229 GTVWAWGDNTQGQVGDGSLTNRLAPVQVPGVTGAVEVAAGAYHSIARLTGGTLRSWGQNS 288

Query: 317 NGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSE 375
           NG LG G+         V G    S    ++ G +H+ A +S G +  W           
Sbjct: 289 NGQLGDGTTTRRTQSVAVPG---VSGATAIATGRQHSVAVVSGGALRAW----------- 334

Query: 376 DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            G ++ GQLG G   D   P  V       A +VS G +HT AL+
Sbjct: 335 -GSNAAGQLGDGTSTD--RPNAVTVAGIAGAAEVSAGRDHTLALV 376



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 35/296 (11%)

Query: 128 ISTGYHHSSAITVD-GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF 186
           ++TG H S A  V+ G  + WG N  GQLG G    +    P  V  L+ +   +A  G 
Sbjct: 13  LATGLHQSEAAAVEPGSAWAWGGNGTGQLGNGTTTGRGTAAP--VTSLTNVTEVEA--GR 68

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
           E S+A+   G V +WG    G+LG G          +T+   P  +  L GV V I A G
Sbjct: 69  EHSIALRSDGTVWTWGFNEMGQLGDGT---------ATNRPAPVQVGGLSGV-VDI-AGG 117

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR-PSLISKLPYSEEVVCGGYHTCVLTS 305
             HS  +  +G V  +G  +  ++       A+R P  ++ L     +  G   +  + S
Sbjct: 118 HYHSLALLADGTVRAWGYNSFGQLGNGATTSAQRTPVAVTPLSGVLAIAGGRDMSYAVRS 177

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 364
            G ++ WG N  G LG G+  +   P RV    S + +  +S G  H  A+ S+G +  W
Sbjct: 178 DGTVWGWGLNTTGQLGDGTTTMRTRPVRVG---SLAGITAISGGRDHGLAVRSDGTV--W 232

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            W          G ++ GQ+G G+  + + P  V       A++V+ G  H+ A L
Sbjct: 233 AW----------GDNTQGQVGDGSLTNRLAP--VQVPGVTGAVEVAAGAYHSIARL 276


>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
           musculus]
 gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
          Length = 651

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 25/290 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  T+TG VYA G N+ G
Sbjct: 1   MFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEG 60

Query: 102 QLGISENIGY-SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +     +   +        + Q+S G + S+A+T DG+L+MWG NS GQ+GL  K
Sbjct: 61  QLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDK 120

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
           +   IP     E   G      + G+  S  VT  G++ ++G   +G+LG   E  +L  
Sbjct: 121 SNVCIP----HEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMN 174

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
            RS     P+ +  +    +++A  G  H+  + E   VY      FG   +   LF+  
Sbjct: 175 HRS-----PQRVLGIPERVIQVACGGG-HTVVLTEK-VVYAFGLGQFGQLGLGTFLFE-- 225

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                P +I ++   +   + CG  HT ++T  G LYT+G   +G LG+G
Sbjct: 226 --TSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLG 273



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 138/279 (49%), Gaps = 27/279 (9%)

Query: 146 MWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
           M+G N+ GQLGLG KAA  I  PT ++ L     K AA G   ++  T  G V + G   
Sbjct: 1   MFGSNNWGQLGLGSKAA--IIKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNN 58

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
            G+LG G       F +    +TP          +K  +AG   SA + E+G+++++GD 
Sbjct: 59  EGQLGLGDTDDRDTFHQIVF-FTP-------ADTIKQLSAGANTSAALTEDGKLFMWGDN 110

Query: 266 AVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           +  ++  ++ ++   P  ++       + CG YH+  +T  GELYT+G  ENG LG+ + 
Sbjct: 111 SEGQIGLEDKSNVCIPHEVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENGKLGLPNE 170

Query: 326 DVLH--SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQ 383
            +++  SP+RV G   E  V QV+CG  HT  ++E  +  +G G              GQ
Sbjct: 171 LLMNHRSPQRVLG-IPER-VIQVACGGGHTVVLTEKVVYAFGLG------------QFGQ 216

Query: 384 LGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           LG G  + +   P I+   ++ K   +SCG NHT  + E
Sbjct: 217 LGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTE 255



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 148/327 (45%), Gaps = 39/327 (11%)

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHHSSAITVDGELYMWGKNSNGQ 154
           G N++GQLG+       ++P  I  LK E V+++  G +H+   T  G +Y  G N+ GQ
Sbjct: 3   GSNNWGQLGLGSKAAI-IKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQ 61

Query: 155 LGLGKKAAK----VIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           LGLG    +     I   T  + +     KQ + G   S A+T  GK+  WG    G++G
Sbjct: 62  LGLGDTDDRDTFHQIVFFTPADTI-----KQLSAGANTSAALTEDGKLFMWGDNSEGQIG 116

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
              +S++           P  +    G  +   + G+ HSA +  +G +Y FG+    K+
Sbjct: 117 LEDKSNVC---------IPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFGEPENGKL 165

Query: 271 -LFQE--GNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
            L  E   NH R P  +  +P    +V CGG HT VLT    +Y +G  + G LG+G+  
Sbjct: 166 GLPNELLMNH-RSPQRVLGIPERVIQVACGGGHTVVLTEKV-VYAFGLGQFGQLGLGTFL 223

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
              S  ++     +  +  +SCG  HTA ++E G + T+G  G HG            LG
Sbjct: 224 FETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFG-DGRHGKLG---------LG 273

Query: 386 HGNDVDYIHPTIVNFGENVKALQVSCG 412
             N  +   PT+ +         ++CG
Sbjct: 274 MENFTNQFFPTLCSNFLRFAVQLIACG 300



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 35/231 (15%)

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           +G+   G+LG G +++I+          P  IK L+  KVK+AA G  H+    + G VY
Sbjct: 2   FGSNNWGQLGLGSKAAII---------KPTCIKALKPEKVKLAACGRNHTLVSTDTGGVY 52

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYS-----EEVVCGGYHTCVLTSGGELYTWGSN 315
             G     ++    G+   R +    + ++     +++  G   +  LT  G+L+ WG N
Sbjct: 53  AAGGNNEGQLGL--GDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDN 110

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFS 374
             G +G+     +  P  V       P+  +SCG+ H+A ++ +G++ T+G         
Sbjct: 111 SEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTMDGELYTFG--------- 158

Query: 375 EDGHSSGGQLGHGNDVDYIH--PTIVNFGENVKALQVSCGFNHTGALLEYV 423
                  G+LG  N++   H  P  V  G   + +QV+CG  HT  L E V
Sbjct: 159 ---EPENGKLGLPNELLMNHRSPQRV-LGIPERVIQVACGGGHTVVLTEKV 205



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 10/115 (8%)

Query: 24  LGICKRWI--------SSTLQRRFAALWGNGDYGRLGLGS-LESRWRPVVCSAFEKHSLK 74
           LGI +R I        +  L  +    +G G +G+LGLG+ L     P +    +   + 
Sbjct: 182 LGIPERVIQVACGGGHTVVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKIC 241

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGI-SENIGYSLEPLRISGLKKEVVQI 128
            ++CG  HT  +TE G +Y  G    G+LG+  EN      P   S   +  VQ+
Sbjct: 242 HISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQL 296



 Score = 41.2 bits (95), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 262 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF 307


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
                   +P  I   +   V+IAA    H SA   + G VY++G 
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T D E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            LSG   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 416

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 28/330 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HTL  TE G VYA G N+ G
Sbjct: 58  MFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEG 117

Query: 102 QLGISENIGYS-LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+ +    S    +     ++++ Q+S G + S+A+T DGEL+MWG NS GQ+GL   
Sbjct: 118 QLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENV 177

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
               +P    V    G      + G+  S  VT  G++ ++G    G+LG   +  +   
Sbjct: 178 TNVCVPQQVTV----GKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLV--- 230

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQEG 275
               +   P+ +  + G  V++A  G  H+  + E   VY      FG   +   LF+  
Sbjct: 231 ----NHRMPQPVPGIPGKVVQVACGGG-HTVVLTEKA-VYTFGLGQFGQLGLGTFLFE-- 282

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS--P 331
                P  I  +   +   + CG  HT ++T  G +YT+G   +G LG+G  +  +   P
Sbjct: 283 --TSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIP 340

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAISEGKI 361
                 F    V  VSCG  HT   +  ++
Sbjct: 341 TLCSN-FLRFIVQLVSCGGCHTLVFATPRL 369



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 155/325 (47%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 17  FGKTQFAENI-----PSKFWFRNDVPTFLSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGS 71

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G       
Sbjct: 72  KST--VSKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERST 129

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   +  
Sbjct: 130 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVC 181

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            P  ++       + CG YH+  +T+ G+LYT+G  E G LG+ +  +++   R+  P  
Sbjct: 182 VPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPNQLLVN--HRMPQPVP 239

Query: 340 ESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 396
             P  V QV+CG  HT  ++E  + T+G G              GQLG G  + +   P 
Sbjct: 240 GIPGKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETSVPK 287

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            +   ++ K   ++CG NHT  + +
Sbjct: 288 AIEHIKDQKISFIACGENHTALITD 312



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 160/353 (45%), Gaps = 43/353 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  +  LK E V+ +  G +H
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVS-KPTCVKALKPEKVKFAACGRNH 98

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 99  TLVSTEGGKVYAAGGNNEGQLGLGDTEER------STFHLISFFTSQRKIKQLSAGSNTS 152

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G    +++           P+ +    G  +   + G+ H
Sbjct: 153 AALTEDGELFMWGDNSEGQIGLENVTNVC---------VPQQVTV--GKPISWISCGYYH 201

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLP-YSEEVVCGGYHTCVLTS 305
           SA +   G++Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 202 SAFVTTEGQLYTFGEPECGKLGLPNQLLVNH-RMPQPVPGIPGKVVQVACGGGHTVVLTE 260

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +YT+G  + G LG+G+     S  +      +  +  ++CG  HTA I++ G + T+
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDMGLMYTF 319

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 416
           G  G HG            LG  N  +   PT+  NF   +  L VSCG  HT
Sbjct: 320 G-DGRHGKLG---------LGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCHT 361


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 138/281 (49%), Gaps = 23/281 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDF 100
           + G    G LG G  +S   P          + +L+ G G H + +T  G VY+ G N +
Sbjct: 44  VMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY 103

Query: 101 GQLGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
            QLG + +   +L P ++S   + K+ + ++ G HHS  +T DGE+Y WG N++GQ+G G
Sbjct: 104 SQLG-NGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSG 162

Query: 159 KKAAKVIPIPTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
             A +  PIP KV  CL        A G   S+AV   G+V +WG  G+G+LG G     
Sbjct: 163 STANQ--PIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGS---- 216

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                S ++ TP  I  L+G++V+    G+ H+  + + G +Y +G  +  ++    GN 
Sbjct: 217 -----SGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQL--GTGNK 269

Query: 278 ARRPSLISKLPYSEEVV----CGGYHTCVLTS-GGELYTWG 313
           + +   +  +   E +V    C   HT    S  G++Y WG
Sbjct: 270 SNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 134/297 (45%), Gaps = 25/297 (8%)

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSS 136
            G   L+LT+   V+  G N  G LG  +     +EP RI  L  K +V +S G   H  
Sbjct: 29  AGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSI-IEPRRIDMLSGKRIVSLSYGSGPHVV 87

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA---ALGFEQSVAVT 193
            +T DGE+Y WG N+  QLG G     + P        + +  K+A   A G   S+ +T
Sbjct: 88  IVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVS----TNLINKKAISVACGSHHSMVLT 143

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKE-LEGVKVKIAAAGFLHSAC 252
             G+V +WG   SG++G G          + ++  PR +   L+   V   A G + S  
Sbjct: 144 CDGEVYAWGYNNSGQVGSGS---------TANQPIPRKVTSCLQNKTVIGIACGQMSSMA 194

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELY 310
           + +NG VY +G     ++      +   P  I+ L     E+VVCG  HT  LT  G +Y
Sbjct: 195 VVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMY 254

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWG 365
            WG+N  G LG G+      P +V     E  V+  +C   HT+A     G++  WG
Sbjct: 255 AWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 26/285 (9%)

Query: 138 ITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF-EQSVAVTGGG 196
           +T + E+++ G NS+G LG G   A+ I  P +++ LSG      + G     V VT  G
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGD--AQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDG 93

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V SWG     +LG+G  +  L    S  + +  LI +    K    A G  HS  +  +
Sbjct: 94  EVYSWGHNAYSQLGNGSTNQAL----SPCQVSTNLINK----KAISVACGSHHSMVLTCD 145

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWG 313
           G VY +G     ++      +   P  ++    ++ V+   CG   +  +   GE+Y WG
Sbjct: 146 GEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWG 205

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTF 373
            N NG LG+GS     +P R+        V+QV CG+ HT A+++  ++ + WG      
Sbjct: 206 YNGNGQLGLGSSGNQPTPCRI-AALQGIRVEQVVCGYAHTLALTDEGVM-YAWGA----- 258

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                +S GQLG GN  +  +P  V   +       +C  +HT A
Sbjct: 259 -----NSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 110/258 (42%), Gaps = 40/258 (15%)

Query: 181 QAALGFEQSVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           Q  L F Q   V G G          +V   G   SG LG G   SI+          PR
Sbjct: 15  QEDLKFIQQACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSII---------EPR 65

Query: 231 LIKELEGVK-VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-----SLI 284
            I  L G + V ++     H   +  +G VY +G  A  ++     N A  P     +LI
Sbjct: 66  RIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNLI 125

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
           +K   S  V CG +H+ VLT  GE+Y WG N +G +G GS      P +V        V 
Sbjct: 126 NKKAIS--VACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVI 183

Query: 345 QVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            ++CG   + A +  G++  WG+ G+            GQLG G+  +   P  +   + 
Sbjct: 184 GIACGQMSSMAVVDNGEVYAWGYNGN------------GQLGLGSSGNQPTPCRIAALQG 231

Query: 404 VKALQVSCGFNHTGALLE 421
           ++  QV CG+ HT AL +
Sbjct: 232 IRVEQVVCGYAHTLALTD 249



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLGS  ++  P   +A +   ++ + CG AHTL LT+ G +YA G N +GQ
Sbjct: 204 WGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQ 263

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG       S  P+++   K+ +V+I+  +  H S+A +  G++YMWG+   GQ      
Sbjct: 264 LGTGNKSNQSY-PVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQ-CRGQ------ 315

Query: 161 AAKVIPIPTKVECLSGIF 178
            + + P  T   C   +F
Sbjct: 316 -SVITPHLTHFSCTDDVF 332


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 115/226 (50%), Gaps = 16/226 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLL- 274

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFGD 264
                   +P  I   +   V+IAA    H SA   + G VY++G 
Sbjct: 275 --------SPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T D E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            LSG   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDDDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLSGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|443686928|gb|ELT90046.1| hypothetical protein CAPTEDRAFT_159495 [Capitella teleta]
          Length = 446

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 167/386 (43%), Gaps = 30/386 (7%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G GD G+LGLG  +  R RP +        +  +A GG HT  LT+ G V+  G ND G 
Sbjct: 70  GTGDTGQLGLGEDIMDRARPALVKI--DGEIVQIAAGGMHTACLTKDGKVFTFGCNDEGA 127

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG--KNSNGQLGLGKK 160
           LG S           +  LK ++VQIS G  H++A+  DGELY WG  +++NG +GL   
Sbjct: 128 LGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDANGSIGLQTP 187

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-SILG 219
             +    PT +  LSG    + A G +  + +T  G++ S G    G+LG   E  S  G
Sbjct: 188 KTRS---PTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRG 244

Query: 220 FLRSTS-EYTPRLIK-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
             +  S   TP  +  +L   K      G   S    + G +Y +G     ++ F +  +
Sbjct: 245 GRKGLSLLLTPAAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVN 304

Query: 278 ARRPSLISKLPYS---EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG-SIDVLHSPER 333
              P            +++  G +HT  L + G++YT G  + G LG+G ++    S   
Sbjct: 305 RYVPDRCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPT 364

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
                 +     V+CG   + A++E G +  WG G +             QLG   D D 
Sbjct: 365 AVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQ------------QLGQAEDDDL 412

Query: 393 IHPT--IVNFGENVKALQVSCGFNHT 416
             PT  I    E    + VS G  HT
Sbjct: 413 YEPTQIISKQMETRDGIMVSAGGQHT 438



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 12/210 (5%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISEN 108
           GR GL  L +     V     K     +  GG  +   T+TG +Y+ GLN++ Q+G  + 
Sbjct: 245 GRKGLSLLLTP--AAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDM 302

Query: 109 IGYSLEPLRISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP 166
           +   + P R    K ++    IS G HH+ A+  +G++Y  G+   G LGLG    +   
Sbjct: 303 VNRYV-PDRCKSFKTDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKS 361

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
            PT V  L  +       G   S+AV   G V +WG G + +LG  ++  +        E
Sbjct: 362 EPTAVTSLKDVKCSAVTCGSAVSLAVAENGAVYAWGMGCNQQLGQAEDDDLY-------E 414

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
            T  + K++E     + +AG  H+  + ++
Sbjct: 415 PTQIISKQMETRDGIMVSAGGQHTVILAKD 444



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 27/201 (13%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+ L+ G G +G+LG G++  I+   R      P L+K ++G  V+IAA G +H+AC+ +
Sbjct: 64  GQTLTIGTGDTGQLGLGED--IMDRAR------PALVK-IDGEIVQIAAGG-MHTACLTK 113

Query: 256 NGRVYIFG--DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G+V+ FG  D         E      PS++       ++  G  HT  L   GELY WG
Sbjct: 114 DGKVFTFGCNDEGALGRSTPEEEDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWG 173

Query: 314 S--NENGCLGIGSIDVLHSPE-RVQGP---FSESPVDQVSCGWKHTAAISE-GKILTWGW 366
           +  + NG +G      L +P+ R   P    S   V +V+ G  H   ++E G+I + G 
Sbjct: 174 TFRDANGSIG------LQTPKTRSPTPIVLLSGQRVIKVASGDDHILCLTENGQIFSMGN 227

Query: 367 G--GSHGTFSEDGHSSGGQLG 385
              G  G  +E   + GG+ G
Sbjct: 228 ADQGQLGRVAECFSTRGGRKG 248



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 144/365 (39%), Gaps = 78/365 (21%)

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK-AAKVIPI 167
           +  S +P  ++GLKK+  ++S   H S    V G+    G    GQLGLG+    +  P 
Sbjct: 33  VDLSTKPT-LNGLKKKAQKVSLVSHRSHGHVV-GQTLTIGTGDTGQLGLGEDIMDRARPA 90

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
             K++   G   + AA G   +  +T  GKV ++G    G LG           RST E 
Sbjct: 91  LVKID---GEIVQIAAGGM-HTACLTKDGKVFTFGCNDEGALG-----------RSTPEE 135

Query: 228 TPRLIKELEGVKVKIA--AAGFLHSACIDENGRVYIFGD-RAVDKMLFQEGNHARRPSLI 284
                  +  +K KI   +AG  H+A + ++G +Y +G  R  +  +  +    R P+ I
Sbjct: 136 EDCFEPSVVDLKAKIVQISAGDSHTAALADDGELYGWGTFRDANGSIGLQTPKTRSPTPI 195

Query: 285 SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS-----------IDVLHSP 331
             L      +V  G  H   LT  G++++ G+ + G LG  +           + +L +P
Sbjct: 196 VLLSGQRVIKVASGDDHILCLTENGQIFSMGNADQGQLGRVAECFSTRGGRKGLSLLLTP 255

Query: 332 ERVQGPFSESPVDQV-SCGWKHTAAISEGKILTWG------------------------- 365
             V     ++    V + GW   A    G I +WG                         
Sbjct: 256 AAVHCKLRKAKFTDVWTGGWTSFAKTDTGDIYSWGLNNYFQIGFDDMVNRYVPDRCKSFK 315

Query: 366 ----W----GGSHGTFSED--------GHSSGGQLGHGNDV--DYIHPTIVNFGENVKAL 407
               W    GG H T + D        G    G LG G++V  +   PT V   ++VK  
Sbjct: 316 TDLDWKDISGGQHHTIALDANGQVYTLGRKDYGVLGLGDNVTEEKSEPTAVTSLKDVKCS 375

Query: 408 QVSCG 412
            V+CG
Sbjct: 376 AVTCG 380


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 150/304 (49%), Gaps = 30/304 (9%)

Query: 125  VVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL 184
            VVQ++ G     A+TV+G++Y  G+ +NG+LGLG  +  V PIP +V  LS    K+ A+
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTV-PIPRQVTALSSYVVKKVAV 2756

Query: 185  --GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
              G   + A+T  GKV SWG G  G+LGH        F R   +  PRLI+ L+  +++ 
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGH--------FSRMNCD-KPRLIEALKTKRIRD 2807

Query: 243  AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGY-- 298
             A G  HSA +  +G +Y +G     ++   +     +P ++  L      +V CG    
Sbjct: 2808 IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDA 2867

Query: 299  HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
             T  LT  G +++WG  + G LG G  +  + P+ ++   +   V Q+ CG + + A+++
Sbjct: 2868 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIER-LNGQGVCQIECGAQFSLALTK 2926

Query: 359  -GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
             G + TWG G               +LGHG+DV    P +V      K + V+ G  H  
Sbjct: 2927 SGVVWTWGKGDYF------------RLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCL 2974

Query: 418  ALLE 421
            A+ +
Sbjct: 2975 AVTD 2978



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 167/349 (47%), Gaps = 33/349 (9%)

Query: 79   GGAHTLF-LTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ---ISTGYHH 134
            GG+ +LF +T  G VYA G    G+LG+  + G    P +++ L   VV+   + +G  H
Sbjct: 2703 GGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRH 2762

Query: 135  SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
            ++A+TVDG+++ WG+  +G+LG   +       P  +E L     +  A G   S A+T 
Sbjct: 2763 ATALTVDGKVFSWGEGDDGKLGHFSRMN--CDKPRLIEALKTKRIRDIACGSSHSAALTS 2820

Query: 195  GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSAC 252
             G++ +WG G  GRLGHG          +T++  P+++K L G +V   A G     +  
Sbjct: 2821 SGELYTWGLGEYGRLGHGD---------NTTQLKPKMVKVLLGHRVIQVACGSRDAQTLA 2871

Query: 253  IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
            + + G V+ +GD    K+          P  I +L      ++ CG   +  LT  G ++
Sbjct: 2872 LTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVW 2931

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            TWG  +   LG GS   +  P+ V+G      +  V+ G  H  A+++ G++  WG    
Sbjct: 2932 TWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWG---- 2986

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 ++ H   GQ G+G       PT+V   E  K  +V+CG +H+ A
Sbjct: 2987 -----DNDH---GQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 147/320 (45%), Gaps = 21/320 (6%)

Query: 44   GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDF 100
            G    GRLGLG S  +   P   +A   + +K +A   GG H   LT  G V++ G  D 
Sbjct: 2721 GEATNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDD 2780

Query: 101  GQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
            G+LG    +    +P  I  LK K +  I+ G  HS+A+T  GELY WG    G+LG G 
Sbjct: 2781 GKLGHFSRMNCD-KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGD 2839

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
               ++ P   KV  L G    Q A G    Q++A+T  G V SWG G  G+LG G     
Sbjct: 2840 NTTQLKPKMVKV--LLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGG---- 2893

Query: 218  LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNH 277
                 S     P+ I+ L G  V     G   S  + ++G V+ +G     ++      H
Sbjct: 2894 -----SEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVH 2948

Query: 278  ARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
             R+P ++  L   +   V  G  H   +T  G++Y WG N++G  G G+  V   P  VQ
Sbjct: 2949 VRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 3008

Query: 336  GPFSESPVDQVSCGWKHTAA 355
            G      + +V+CG  H+ A
Sbjct: 3009 G-LEGQKITRVACGSSHSVA 3027



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 137/298 (45%), Gaps = 36/298 (12%)

Query: 80  GAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-----KEVVQISTGYHH 134
           G H L L  TG VY+ G  D G+LG  + +    EP  IS        K VV I+ G  +
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE-EPKVISAFSGKQAGKHVVHIACGSTY 563

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF--EQSVAV 192
           S+AIT +GELY WG+ + G+LG G    + IP+   V  L G+     A G    Q +AV
Sbjct: 564 SAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM--LVAGLKGLKVIDVACGSGDAQPLAV 621

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
           T  G+V SWG G  G+LG G          S    TP+LI++L+ + V     G   S  
Sbjct: 622 TDNGQVWSWGDGDYGKLGRGG---------SDGCKTPKLIEKLQDLDVVKVRCGSQFSVA 672

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELY 310
           + ++G+VY +G     ++      H R P L+  L   +  +V  G  H   LT   E++
Sbjct: 673 LTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVH 732

Query: 311 TWGSNENGCLGIGSIDVLHS--PERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGW 366
           +WG+N+         D LH   PE    P  ++         KH   I+ G   ++ W
Sbjct: 733 SWGNNDQ----CQHFDTLHQTKPEPSLLPGLDT---------KHIVGIACGPAQSFAW 777



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 137/272 (50%), Gaps = 25/272 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG GD G+LG  S  +  +P +  A +   ++ +ACG +H+  LT +G +Y  GL ++G+
Sbjct: 2775 WGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGR 2834

Query: 103  LGISENIGYSLEPLRISGLK-KEVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  +N    L+P  +  L    V+Q++ G   +   A+T +G ++ WG    G+LG G 
Sbjct: 2835 LGHGDNT-TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG- 2892

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   +P  +E L+G    Q   G + S+A+T  G V +WG G   RLGHG +  +  
Sbjct: 2893 -GSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHV-- 2949

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P++++ L G K+   A G LH   + + G+VY +GD        Q+GN   
Sbjct: 2950 -------RKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHG----QQGNGTT 2998

Query: 279  ---RRPSLISKLPYSE--EVVCGGYHTCVLTS 305
               R+P+L+  L   +   V CG  H+   T+
Sbjct: 2999 TVNRKPTLVQGLEGQKITRVACGSSHSVAWTT 3030



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 146/321 (45%), Gaps = 45/321 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P+         +  +AC     L L+  G VY    N             +L P  + GL
Sbjct: 443 PIQSKGLANLGVTQIACAEKRFLILSRNGRVYTQAYN-----------SDTLAPQLVQGL 491

Query: 122 -KKEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI--PTKVECLSG 176
             + +V+I+  +  HH  A+   GE+Y WG    G+LG G      +P+  P  +   SG
Sbjct: 492 ASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGD----TVPLEEPKVISAFSG 547

Query: 177 IFTKQA-------ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
              KQA       A G   S A+T  G++ +WG G  GRLGHG          S  E  P
Sbjct: 548 ---KQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGS---------SEDEAIP 595

Query: 230 RLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
            L+  L+G+KV   A  +G      + +NG+V+ +GD    K+     +  + P LI KL
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 288 PYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              +  +V CG   +  LT  G++Y+WG  +N  LG G+ + +  P+ ++    +  +D 
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVID- 714

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           V+ G  H  A++E  ++ +WG
Sbjct: 715 VAAGSTHCLALTEDSEVHSWG 735



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 118/230 (51%), Gaps = 21/230 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFE-----KHSLKALACGGAHTLFLTETGCVYATGL 97
           WG GD GRLG G       P V SAF      KH +  +ACG  ++  +T  G +Y  G 
Sbjct: 520 WGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVH-IACGSTYSAAITAEGELYTWGR 578

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQIS--TGYHHSSAITVDGELYMWGKNSNGQ 154
            ++G+LG   +   ++ P+ ++GLK  +V+ ++  +G     A+T +G+++ WG    G+
Sbjct: 579 GNYGRLGHGSSEDEAI-PMLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGK 637

Query: 155 LGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQE 214
           LG G   +     P  +E L  +   +   G + SVA+T  G+V SWG G + RLGHG E
Sbjct: 638 LGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTE 695

Query: 215 SSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGD 264
             +           P+L++ L+G KV   AAG  H   + E+  V+ +G+
Sbjct: 696 EHV---------RYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGN 736



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 170/385 (44%), Gaps = 43/385 (11%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P  C A    +L+ +   GG  TLF +T  G +YATG    
Sbjct: 3636 WGHNHRGQLGGIEGAKVKVPTPCEALA--TLRPVQLIGGEQTLFAVTADGKLYATGYGAG 3693

Query: 101  GQLGISENIGYS----LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
            G+LG+      S    LE ++   ++K  V +++G  H  A++ +GE+Y WG+  +G+LG
Sbjct: 3694 GRLGVGGTESVSAPTLLESIQHVFIRK--VAVNSGGKHCLALSSEGEVYSWGEAEDGKLG 3751

Query: 157  LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
             G ++      P  VE L G      A G   S  VT  G + +WG G  GRLGH     
Sbjct: 3752 HGNRSP--CDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSD--- 3806

Query: 217  ILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQE 274
                  S  +  P+L++ L+G +V   A  +G   + C+ ++  V+ +GD    K+    
Sbjct: 3807 ------SEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860

Query: 275  GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             +  + P    K+P S  V   G  +    S   L   G  +   LG GS D +  P +V
Sbjct: 3861 SDGCKVP---MKVPLSLRV---GRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPRQV 3914

Query: 335  QGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
            QG      V  ++ G  H    + EG++ TW            G +  GQLG G      
Sbjct: 3915 QG-LQGKKVIAIATGSLHCVCCTEEGEVYTW------------GDNDEGQLGDGTTNAIQ 3961

Query: 394  HPTIVNFGENVKALQVSCGFNHTGA 418
             P +V   +  K  +V+CG  HT A
Sbjct: 3962 RPRLVAALQGRKVNRVACGSAHTLA 3986



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 113/260 (43%), Gaps = 24/260 (9%)

Query: 165  IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
            I +P+  E LS +   Q A G +   AVT  GKV + G   +GRLG G  S  +   R  
Sbjct: 2684 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQV 2743

Query: 225  SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLI 284
            +  +  ++K     KV + + G  H+  +  +G+V+ +G+    K+      +  +P LI
Sbjct: 2744 TALSSYVVK-----KVAVHSGGR-HATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLI 2797

Query: 285  SKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
              L      ++ CG  H+  LTS GELYTWG  E G LG G       P+ V+       
Sbjct: 2798 EALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR- 2856

Query: 343  VDQVSCGWKHT---AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
            V QV+CG +     A   EG + +WG     G F        G+LG G       P  + 
Sbjct: 2857 VIQVACGSRDAQTLALTDEGLVFSWG----DGDF--------GKLGRGGSEGCNVPQNIE 2904

Query: 400  FGENVKALQVSCGFNHTGAL 419
                    Q+ CG   + AL
Sbjct: 2905 RLNGQGVCQIECGAQFSLAL 2924



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 124/331 (37%), Gaps = 87/331 (26%)

Query: 142  GELYMWGKNSNGQLGLGKKAAKV------------------------------------- 164
            G +Y WG N  GQLG G + AKV                                     
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3689

Query: 165  --------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGR 208
                          +  PT +E +  +F ++ A+  G +  +A++  G+V SWG    G+
Sbjct: 3690 YGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGK 3749

Query: 209  LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
            LGHG  S             PR+++ L G +V   AAG  HSAC+   G +Y +G     
Sbjct: 3750 LGHGNRSPC---------DRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYG 3800

Query: 269  KMLFQEGNHARRPSLISKLP--YSEEVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGS 324
            ++   +     +P L+  L      +V CG     T  LT    +++WG  + G LG G 
Sbjct: 3801 RLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGG 3860

Query: 325  IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
             D    P +V  P S      +  G   T   S  ++   G G  H            +L
Sbjct: 3861 SDGCKVPMKV--PLS------LRVGRPSTPPPSWPRLDVGGKGDYH------------RL 3900

Query: 385  GHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
            GHG+D     P  V   +  K + ++ G  H
Sbjct: 3901 GHGSDDHVRRPRQVQGLQGKKVIAIATGSLH 3931



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK----VKIAAA 245
           +A+   G+V SWG G  GRLGHG    +           P++I    G +    V   A 
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPL---------EEPKVISAFSGKQAGKHVVHIAC 559

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGG--YHTC 301
           G  +SA I   G +Y +G     ++          P L++ L   +  +V CG       
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQPL 619

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGK 360
            +T  G++++WG  + G LG G  D   +P+ ++    +  V +V CG + + A++ +G+
Sbjct: 620 AVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEK-LQDLDVVKVRCGSQFSVALTKDGQ 678

Query: 361 ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
           + +WG G +             +LGHG +    +P ++   +  K + V+ G  H  AL 
Sbjct: 679 VYSWGKGDNQ------------RLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALT 726

Query: 421 E 421
           E
Sbjct: 727 E 727



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 27/224 (12%)

Query: 194  GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
            G G +  WG    G+LG  + + +       +  T R ++ + G +   A         +
Sbjct: 3629 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFA---------V 3679

Query: 254  DENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY----SEEVVCGGYHTCVLTSGGEL 309
              +G++Y  G  A  ++          P+L+  + +       V  GG H   L+S GE+
Sbjct: 3680 TADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739

Query: 310  YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGG 368
            Y+WG  E+G LG G+      P  V+       VD ++ G  H+A + S G + TWG G 
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVD-IAAGGAHSACVTSAGDLYTWGKG- 3797

Query: 369  SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
                         G+LGH +  D + P +V   +  + + V+CG
Sbjct: 3798 -----------RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 3830



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 16/120 (13%)

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ---GPFSESPVDQVSCGWKHT 353
           G+H   L + GE+Y+WG  + G LG G    L  P+ +    G  +   V  ++CG  ++
Sbjct: 505 GHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYS 564

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           AAI+ EG++ TWG G              G+LGHG+  D   P +V   + +K + V+CG
Sbjct: 565 AAITAEGELYTWGRGNY------------GRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 59/143 (41%), Gaps = 27/143 (18%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG GD  RLG G+ E    P +  A +   +  +A G  H L LTE   V++ G ND   
Sbjct: 682 WGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQ 741

Query: 100 -FGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            F  L  ++      EP  + GL  K +V I+ G   S         + W   S   +GL
Sbjct: 742 HFDTLHQTKP-----EPSLLPGLDTKHIVGIACGPAQS---------FAWSSCSEWSVGL 787

Query: 158 GKKAAKVIPIPTKVECLSGIFTK 180
                    +P  V+  SG F +
Sbjct: 788 R--------VPFVVDVCSGTFEQ 802


>gi|302760337|ref|XP_002963591.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
 gi|300168859|gb|EFJ35462.1| hypothetical protein SELMODRAFT_404893 [Selaginella moellendorffii]
          Length = 420

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 192/436 (44%), Gaps = 65/436 (14%)

Query: 24  LGICKRWISSTLQRRF--AALWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALA 77
           +G+ +R   + L R F  AA++  GD     LG   S     + P         S+  +A
Sbjct: 2   IGLARR--RNVLGRAFHTAAVYSFGDGSNGALGHPHSFTNDSFEPAAVPGLPP-SIARVA 58

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENI---GYSLEPLRISGLKKEVVQISTGYHH 134
           CG  H+L L+ +G ++A G N+ GQLG  E       ++ P R+ G++   V+ + G   
Sbjct: 59  CGHYHSLALSRSGELWAWGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSGV 118

Query: 135 -SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
            S AI  DG L+ WG +  GQLGLG      + +P K+  L+G    Q +LG+  ++A T
Sbjct: 119 VSMAICEDGSLWSWGSSKRGQLGLGLGVTSSL-LPQKIHALAGKSVLQVSLGWGHALACT 177

Query: 194 GGGKVLSWGAGGSGRLG-------------------HGQ--ESSILGFLRSTS----EYT 228
             G++ SWG   SGRLG                   H    E  ++  LR       ++ 
Sbjct: 178 MDGELFSWGYHDSGRLGYLLPQDQTLMIQPSKDSLDHNDVGEKMLMEQLRKEDAPILQWE 237

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+L+K  E  K+   A G  HS  + E+G ++ FGD +  ++  +    +   S +    
Sbjct: 238 PKLVKLPEPSKIVQVACGLDHSLALSESGLLFSFGDNSTAQLGRETTEDSPIISRVGGDL 297

Query: 289 YSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSE--SP 342
             ++VV      G+   V       YTWG +    LG         P  V     E   P
Sbjct: 298 EGKQVVAIGAGWGHSLAVERCSRAAYTWGWSSGSQLG------RSGPSSVPKQLEELDDP 351

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NF 400
           V  V+ G  H+ A+ S+ ++ TWG G              G+LG G+  D   P +V + 
Sbjct: 352 VVSVAGGRVHSLALTSKHQVWTWGCG------------RNGRLGLGSSRDENLPVLVESL 399

Query: 401 GENVKALQVSCGFNHT 416
            E+ + + V CG++H+
Sbjct: 400 EEHAEVIDVCCGYDHS 415


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 162/361 (44%), Gaps = 32/361 (8%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L  +   C  R I+ T ++     WG    GRLG G+     RP +  A    +
Sbjct: 249 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 308

Query: 73  LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           ++ +ACG  HT  +T +G +Y    G  + G LG      + L P R+SG  +  +V+ +
Sbjct: 309 VEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWL-PKRVSGPLEGVQVLSV 367

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS+  T  G+++ +G  + G LG GK+  + +  P +VE LSG  T + A G   
Sbjct: 368 SCGSWHSALTTSSGKVFTFGDGTFGALGHGKR--ETVGYPKEVEALSGFRTMKVACGLWH 425

Query: 189 SVAVTGGG----------KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+              K+ +WGAG   +LGHG + S L          P  ++ L   
Sbjct: 426 SAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRL---------VPTCVQSLIDY 476

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVC 295
                A G   +  +  +G V+  G  + +  L    +  ++P  +         EE+ C
Sbjct: 477 SFHQVACGHSMTIALSTSGHVFTMGSSS-NGQLGNPKSDGKQPIPVQDRLSGELVEEISC 535

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H  VLTS  E+YTWG   NG LG G ++    P  V+    +  V  ++CG   T  
Sbjct: 536 GSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEA-LKDRHVKSIACGSNFTTC 594

Query: 356 I 356
           I
Sbjct: 595 I 595



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 161/363 (44%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ +ACG  H    T  G V+A G    G+LG   +   S   L  +     V  I+ G 
Sbjct: 257 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGE 316

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
            H+ A+T  G+LY WG        LG  A     +P +V   L G+     + G   S  
Sbjct: 317 FHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSAL 376

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            T  GKV ++G G  G LGHG+  ++ G+        P+ ++ L G +    A G  HSA
Sbjct: 377 TTSSGKVFTFGDGTFGALGHGKRETV-GY--------PKEVEALSGFRTMKVACGLWHSA 427

Query: 252 CIDENG----------RVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
            I E+           ++Y +G  A DK     G+   R  P+ +  L  YS  +V CG 
Sbjct: 428 AIVESSNHVSINVISRKLYTWG--AGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGH 485

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  L++ G ++T GS+ NG LG    D    P  VQ   S   V+++SCG  H A + 
Sbjct: 486 SMTIALSTSGHVFTMGSSSNGQLGNPKSDG-KQPIPVQDRLSGELVEEISCGSCHVAVLT 544

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG   D   PT+V   ++     ++CG N T
Sbjct: 545 SRSEVYTWGMGAN------------GRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFT 592

Query: 417 GAL 419
             +
Sbjct: 593 TCI 595



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 136/301 (45%), Gaps = 47/301 (15%)

Query: 142 GELYMWGK------NSNGQLG-LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++Y+WG+       + G    L  KA  +IP P + + +  +  +Q A G+      T 
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 272

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    GRLGHG ++ I           P+L++ L    V+  A G  H+  + 
Sbjct: 273 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYIACGEFHTCAVT 323

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGEL 309
            +G +Y +GD   +  L   G  A    P  +S      +V+   CG +H+ + TS G++
Sbjct: 324 ASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 383

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---------- 359
           +T+G    G LG G  + +  P+ V+   S     +V+CG  H+AAI E           
Sbjct: 384 FTFGDGTFGALGHGKRETVGYPKEVEA-LSGFRTMKVACGLWHSAAIVESSNHVSINVIS 442

Query: 360 -KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            K+ TWG G  +            QLGHG+    + PT V    +    QV+CG + T A
Sbjct: 443 RKLYTWGAGDKN------------QLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIA 490

Query: 419 L 419
           L
Sbjct: 491 L 491



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 92/198 (46%), Gaps = 17/198 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G+ H A     G V+ +G+    ++         RP L+  L 
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 305

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            S  E + CG +HTC +T+ G+LYTWG      G LG G+      P+RV GP     V 
Sbjct: 306 VSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVL 365

Query: 345 QVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            VSCG W      S GK+ T+G     GTF        G LGHG      +P  V     
Sbjct: 366 SVSCGSWHSALTTSSGKVFTFG----DGTF--------GALGHGKRETVGYPKEVEALSG 413

Query: 404 VKALQVSCGFNHTGALLE 421
            + ++V+CG  H+ A++E
Sbjct: 414 FRTMKVACGLWHSAAIVE 431


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 142/293 (48%), Gaps = 25/293 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           L+ G +H+L +   G V+A G +  G L     +     P+ + GL  ++V ++ G  HS
Sbjct: 37  LSAGDSHSLAVHADGSVWAWGASASG-LREEGALSRRFAPVPVPGLS-DIVSVAAGGAHS 94

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG L+ WG N  GQLG G   A+ +P+  +V  LSG+  +  A G   S+A+   
Sbjct: 95  LAVRADGTLWTWGGNPYGQLGDGTTTARALPV--QVAGLSGV--RAVATGLGHSLALRAD 150

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG    G+LG G  S  L         TPR I  L GV+  +AA GF HS  + +
Sbjct: 151 GTVWAWGLNQFGQLGDGTTSQWL---------TPRPIPGLSGVR-SVAAGGF-HSLVVRD 199

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +  V+ +G    D     +G+ +RR  P  I  L     V  G YH+  + + G L  WG
Sbjct: 200 DDTVWAWGSN--DYGELGDGSTSRRAVPRAIPGLRNVASVAGGCYHSLAVHADGTLSAWG 257

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            N  G LG G+     +P  V G    S V  V+  + H+ A+ +EG +  WG
Sbjct: 258 LNSYGQLGDGTFSNRATPRPVPG---LSGVRCVATSFFHSLALRAEGTVWAWG 307



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 26/296 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG   YG+LG G+  +R  PV  +      ++A+A G  H+L L   G V+A GLN FGQ
Sbjct: 106 WGGNPYGQLGDGTTTARALPVQVAGLS--GVRAVATGLGHSLALRADGTVWAWGLNQFGQ 163

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      + L P  I GL   V  ++ G  HS  +  D  ++ WG N  G+LG G  + 
Sbjct: 164 LGDGTTSQW-LTPRPIPGLSG-VRSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSR 221

Query: 163 KVIPIPTKVECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
           + +P       + G+      A G   S+AV   G + +WG    G+LG G  S      
Sbjct: 222 RAVP-----RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFS------ 270

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR- 280
              +  TPR +  L G  V+  A  F HS  +   G V+ +G     +    +G  +R+ 
Sbjct: 271 ---NRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGLNGYGEQ--GDGTASRQS 323

Query: 281 --PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             P  +  L     V  G +H+  + + G +  WG N  G LG G+     +P  V
Sbjct: 324 PTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 154/357 (43%), Gaps = 34/357 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G    G+L  R+ PV         + ++A GGAH+L +   G ++  G N +GQ
Sbjct: 56  WGASASGLREEGALSRRFAPVPVPGLSD--IVSVAAGGAHSLAVRADGTLWTWGGNPYGQ 113

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       +L P++++GL   V  ++TG  HS A+  DG ++ WG N  GQLG G  + 
Sbjct: 114 LGDGTTTARAL-PVQVAGLSG-VRAVATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQ 171

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P P  +  LSG+  +  A G   S+ V     V +WG+   G LG G  S       
Sbjct: 172 WLTPRP--IPGLSGV--RSVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTS------- 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 PR I  L    V   A G  HS  +  +G +  +G  +  ++     ++   P 
Sbjct: 221 --RRAVPRAIPGLR--NVASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPR 276

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH-SPERVQGPFSES 341
            +  L     V    +H+  L + G ++ WG N  G  G G+      +P  V G    S
Sbjct: 277 PVPGLSGVRCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPG---LS 333

Query: 342 PVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
            V  V+ G  H+ A++           ++GT S  GH+  GQLG G       P  V
Sbjct: 334 GVLSVATGTFHSLAVN-----------TNGTVSAWGHNGQGQLGDGTATHRSTPVTV 379



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 24/247 (9%)

Query: 43  WGNGDYGRLGLGSLESRW---RPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG   +G+LG G+  S+W   RP+   +     ++++A GG H+L + +   V+A G ND
Sbjct: 156 WGLNQFGQLGDGT-TSQWLTPRPIPGLS----GVRSVAAGGFHSLVVRDDDTVWAWGSND 210

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           +G+LG       ++ P  I GL+  V  ++ G +HS A+  DG L  WG NS GQLG G 
Sbjct: 211 YGELGDGSTSRRAV-PRAIPGLRN-VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGT 268

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
            + +  P P  V  LSG+  +  A  F  S+A+   G V +WG  G G  G G  S    
Sbjct: 269 FSNRATPRP--VPGLSGV--RCVATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASR--- 321

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   TPR +  L GV     A G  HS  ++ NG V  +G     ++      H  
Sbjct: 322 -----QSPTPRPVPGLSGVLS--VATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRS 374

Query: 280 RPSLISK 286
            P  + K
Sbjct: 375 TPVTVLK 381



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 133/308 (43%), Gaps = 32/308 (10%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
           S  PL  +G +   V +S G  HS A+  DG ++ WG +++G    G  + +  P+P  V
Sbjct: 22  SAPPLGRAG-EGPRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVP--V 78

Query: 172 ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
             LS I +   A G   S+AV   G + +WG    G+LG G          +T+   P  
Sbjct: 79  PGLSDIVS--VAAGGAHSLAVRADGTLWTWGGNPYGQLGDGT---------TTARALPVQ 127

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           +  L GV+    A G  HS  +  +G V+ +G     ++     +    P  I  L    
Sbjct: 128 VAGLSGVRA--VATGLGHSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGLSGVR 185

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK 351
            V  GG+H+ V+     ++ WGSN+ G LG GS      P  + G  +   V  V+ G  
Sbjct: 186 SVAAGGFHSLVVRDDDTVWAWGSNDYGELGDGSTSRRAVPRAIPGLRN---VASVAGGCY 242

Query: 352 HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           H+ A+            + GT S  G +S GQLG G   +   P  V     V+ +  S 
Sbjct: 243 HSLAVH-----------ADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLSGVRCVATS- 290

Query: 412 GFNHTGAL 419
            F H+ AL
Sbjct: 291 -FFHSLAL 297


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 52  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 110

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 111 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 168

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 169 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 219

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 220 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 277

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 278 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 311



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 6   KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 64

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 65  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 124

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 125 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 174

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  IS L    
Sbjct: 175 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 234

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 235 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIIEIAACH 293

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 294 LAHTSAAKTQGGHVYMWG 311



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 56  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 113

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 114 HGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 173

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 174 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 221

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  ++  + ++  +V+CG+ HT  L +
Sbjct: 222 PTPCRISALQGIRVQRVACGYAHTLVLTD 250



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 38  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 93

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 94  GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 145

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 146 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 201

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 202 VYVWGYNGNGQLGLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 258

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 259 ----------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 299



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 263

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 264 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 316

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 317 --SVILPHLTHFSCTDDVF 333


>gi|456861134|gb|EMF79839.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           weilii serovar Topaz str. LT2116]
          Length = 506

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLIPGIDDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S+ P+ + GL+ +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANNLNADSFSMNPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A       P KVE LSGI  KQ A G +  +A+   GK+ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   ++V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTQKVYEPNKAVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 159/363 (43%), Gaps = 41/363 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY TG N+FGQLG   + G     + +     + +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSIRNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
           S AI  +G +Y WG N+ GQLG+G         + A    P PT +  +        A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLIPGIDDAV--MGAYG 246

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
           F  ++ +   G V+++G    G+LG+G  +     L + S    P  +  L  V   I  
Sbjct: 247 FNHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMNPVAVVGLRDVIQVI-- 299

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
           AG  HSA + ENG VY++G      +        N A+  P  +  L   +++  G  H 
Sbjct: 300 AGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359

Query: 301 CVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             L S G++Y+WG N +G LGI   GS +    P +V    + S V   + G +  + + 
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILK 417

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
            G++  WG          +G+++   +G  N      P     G +   +   CG  H  
Sbjct: 418 SGEVKGWG---------ANGNTANLAIGETNTQKVYEPNKAVVGID-DVIHFGCGATHNF 467

Query: 418 ALL 420
            LL
Sbjct: 468 VLL 470



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 29/268 (10%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
             IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 178 RNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           I  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 IPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   +    +P +V+G    S 
Sbjct: 292 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG---LSG 348

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           + Q++ G  H  A+ S+GKI +WG   S
Sbjct: 349 IKQIANGRDHILALASDGKIYSWGLNAS 376



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGI-FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+   + +  P K   + GI        G   +  + G G++  WG    G LG 
Sbjct: 434 AIGETNTQKVYEPNK--AVVGIDDVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 62  GCLGLGDIQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLG-NG 120

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              +   P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 121 TTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQ-- 178

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 179 PIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGS---------SG 229

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           +  TP  I  L+G++V+  A G+ H+  + ++G+VY +G  +  ++    GN + +    
Sbjct: 230 NHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQL--GTGNKSNQSYPT 287

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 288 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 321



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 144/319 (45%), Gaps = 25/319 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L++T    ++  G N  G LG+ + I  ++E
Sbjct: 16  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGD-IQSTIE 74

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G      +P      
Sbjct: 75  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTN 134

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 135 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGS---------TANQPIPRRV 184

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHARRPSLISKLP-- 288
              L+   V   A G + S  + ++G VY++G     ++ L   GNH+  P  I+ L   
Sbjct: 185 TGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNGNGQLGLGSSGNHST-PCRIAALQGI 243

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
             + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C
Sbjct: 244 RVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAAC 302

Query: 349 GWKHTAAISE--GKILTWG 365
              HT+A     G +  WG
Sbjct: 303 HSTHTSAAKTQGGHVYMWG 321



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 110/235 (46%), Gaps = 26/235 (11%)

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHS 250
           +T   ++   G    G LG       LG ++ST E  PR +  L G K+   + G   H 
Sbjct: 47  MTVNDEIFVLGTNCCGCLG-------LGDIQSTIE--PRRLDSLSGKKIACLSYGSGPHI 97

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGG 307
                 G V+ +G  A +++     NH   P  IS    +++V+   CG YH+ VLTS G
Sbjct: 98  VLATTEGEVFTWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDG 157

Query: 308 ELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGW 366
           E++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+
Sbjct: 158 EVFAWGCNNSGQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGY 217

Query: 367 GGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            G+            GQLG G+  ++  P  +   + ++  +V+CG+ HT  L +
Sbjct: 218 NGN------------GQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTD 260



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  +   P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 214 VWGYNGNGQLGLGSSGNHSTPCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANSYG 273

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 274 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 326

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T + C   +F
Sbjct: 327 --SVILPHLTHLSCTDDVF 343


>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
          Length = 850

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 150/373 (40%), Gaps = 28/373 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN     LG  + +    P + +   + +   +A G   T  +   G +++ G +   Q
Sbjct: 4   WGNTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEGRLWSCGSHTRPQ 63

Query: 103 LGISENIGYSLEPLR-ISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
             +   +G++   L  + GL+ E     +   H  A+T+ GE+Y WG NS  QLG     
Sbjct: 64  NDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGSNSYKQLGRDGVN 123

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
            +    P K+  L G    Q   G   S AV+  G + +WG GG GRLGHG    +    
Sbjct: 124 NR----PMKITALEGEEVVQVCAGGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDV---- 175

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
                   R+    EG++V   A G    HS C+ E+G +Y FGD    K+     +  R
Sbjct: 176 ----NVPTRVAAFPEGIRVVHVACGLGDAHSMCVTEDGHIYSFGDGDFGKLGHGTNDRRR 231

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           +P  I       +VVCG   +  ++  G LY WG      LG G+  V+  P       +
Sbjct: 232 QPERIDFDIV--KVVCGSSTSAAISLSGALYVWGGGRRYRLGTGTEAVIWQPRTAHALNT 289

Query: 340 ESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVN 399
              VD         A    G++  WG    HG    D          G++   I P ++ 
Sbjct: 290 HKVVDCALSSEHGVAVTDRGEVFVWG-ANDHGQLGADA---------GSEKTIIAPRVIK 339

Query: 400 F-GENVKALQVSC 411
             GE     +V C
Sbjct: 340 LPGEFPAVNRVHC 352



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 29/221 (13%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           V SWG             + LG++ +    +P++   L  +     A G   +  ID  G
Sbjct: 1   VFSWG---------NTRDAELGYVANQPVESPQINTLLSRLNPTHIALGQRGTFVIDGEG 51

Query: 258 RVYIFGD--RAVDKMLFQEGNHARRPSLISKLPYSEEV-VCGGYHTCVLTSGGELYTWGS 314
           R++  G   R  + +    G+     +L+  L     + V    H   +T  GE+Y+WGS
Sbjct: 52  RLWSCGSHTRPQNDVKSFLGHAESSLALVEGLESERFIQVSATSHVLAVTLQGEVYSWGS 111

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTF 373
           N    LG   ++  + P ++     E  V QV  G  H+AA+S+ G + TWG GG     
Sbjct: 112 NSYKQLGRDGVN--NRPMKITALEGEEVV-QVCAGGHHSAAVSKAGNLYTWGRGGY---- 164

Query: 374 SEDGHSSGGQLGHGNDVDYIHPT-IVNFGENVKALQVSCGF 413
                   G+LGHG   D   PT +  F E ++ + V+CG 
Sbjct: 165 --------GRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGL 197



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 31/63 (49%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG G   RLG G+    W+P    A   H +   A    H + +T+ G V+  G ND G
Sbjct: 261 VWGGGRRYRLGTGTEAVIWQPRTAHALNTHKVVDCALSSEHGVAVTDRGEVFVWGANDHG 320

Query: 102 QLG 104
           QLG
Sbjct: 321 QLG 323


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 132/279 (47%), Gaps = 24/279 (8%)

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLR-ISGLKKEVVQI 128
           +  L A+ C       L++TG V+            S +  ++   L  +SG+   V Q+
Sbjct: 79  EERLAAVGCTDDGVTLLSDTGVVFCVD---------SPHPPFTPRSLEALSGIT--VTQV 127

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  H+  ++ DG++Y WG+NS GQLGLGK+    I  P  V  LS +   Q + G + 
Sbjct: 128 ACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDH 187

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S A++  G V  WG    G+LG G          +T   TP L+  L   K   AA G  
Sbjct: 188 SFALSVSGSVFGWGRNDCGQLGLGD---------TTDRETPTLVHYLNMKKTVFAACGKD 238

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSG 306
           H+A +  +G V+ FG     ++      +A  P L+++L      ++ CG YHT VLT  
Sbjct: 239 HTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDH 298

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
            ++Y++G NE+G LG         P  VQ P  E P+ Q
Sbjct: 299 MKVYSFGCNEHGQLGPREETHPCVPLPVQLP-REGPIIQ 336



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 16/131 (12%)

Query: 292 EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS--IDVLHSPERVQGPFSESPVDQVSCG 349
           +V CG  HT VL+  G++YTWG N  G LG+G      + SP+ V+   S  PV QVS G
Sbjct: 126 QVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRS-LSSMPVVQVSAG 184

Query: 350 WKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H+ A+S  G +  W            G +  GQLG G+  D   PT+V++    K + 
Sbjct: 185 GDHSFALSVSGSVFGW------------GRNDCGQLGLGDTTDRETPTLVHYLNMKKTVF 232

Query: 409 VSCGFNHTGAL 419
            +CG +HT  L
Sbjct: 233 AACGKDHTAVL 243



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 11/201 (5%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P  +E LSGI   Q A G + +V ++  G+V +WG    G+LG G+E         +S  
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGC-------SSIS 165

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           +P+ ++ L  + V   +AG  HS  +  +G V+ +G     ++   +      P+L+  L
Sbjct: 166 SPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYL 225

Query: 288 PYSEEV--VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ 345
              + V   CG  HT VLT  G ++T+GS   G LG  S      P R+      + V +
Sbjct: 226 NMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCP-RLVAELWGAKVTK 284

Query: 346 VSCGWKHTAAISE-GKILTWG 365
           ++CG  HT  +++  K+ ++G
Sbjct: 285 IACGRYHTLVLTDHMKVYSFG 305



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 100/203 (49%), Gaps = 20/203 (9%)

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEG-NHARRPSLI 284
           +TPR ++ L G+ V   A G  H+  + ++G+VY +G  +  ++ L +EG +    P  +
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170

Query: 285 ---SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES 341
              S +P  + V  GG H+  L+  G ++ WG N+ G LG+G      +P  V     + 
Sbjct: 171 RSLSSMPVVQ-VSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKK 229

Query: 342 PVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNF 400
            V   +CG  HTA ++ +G + T+G           GH   GQLGH +  + + P +V  
Sbjct: 230 TV-FAACGKDHTAVLTMDGTVFTFG----------SGHY--GQLGHNSFRNALCPRLVAE 276

Query: 401 GENVKALQVSCGFNHTGALLEYV 423
               K  +++CG  HT  L +++
Sbjct: 277 LWGAKVTKIACGRYHTLVLTDHM 299



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  D G+LGLG    R  P +            ACG  HT  LT  G V+  G   +GQ
Sbjct: 200 WGRNDCGQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQ 259

Query: 103 LGISENIGYSLEPLRISGL-KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG   +   +L P  ++ L   +V +I+ G +H+  +T   ++Y +G N +GQLG  ++ 
Sbjct: 260 LG-HNSFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318

Query: 162 AKVIPIPTKV 171
              +P+P ++
Sbjct: 319 HPCVPLPVQL 328



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 4/175 (2%)

Query: 43  WGNGDYGRLGLGS--LESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG    G+LGLG     S   P    +     +  ++ GG H+  L+ +G V+  G ND 
Sbjct: 146 WGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDC 205

Query: 101 GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           GQLG+ +        L      K+ V  + G  H++ +T+DG ++ +G    GQLG    
Sbjct: 206 GQLGLGDTTDRETPTLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLG--HN 263

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           + +    P  V  L G    + A G   ++ +T   KV S+G    G+LG  +E+
Sbjct: 264 SFRNALCPRLVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREET 318


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LHS C+++                                
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 159/337 (47%), Gaps = 35/337 (10%)

Query: 92   VYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGK 149
            V+  GLND  QLG      +   +    +S L+   V I+ G      ++ DG+L+  G+
Sbjct: 3059 VFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRP--VHIAGGSKTLFIVSHDGKLFACGE 3116

Query: 150  NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSG 207
             +NG+LGLG   +  +  P     LS +  ++ A+  G + ++A+T  GKV SWG G  G
Sbjct: 3117 GTNGRLGLGH--SNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGEDG 3174

Query: 208  RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
            +LGHG         R T E  PRLI+ L G +V   A G  HSAC+   G +Y +G    
Sbjct: 3175 KLGHGN--------RITLE-APRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225

Query: 268  DKMLFQEGNHARRPSLISKLPYSE--EVVCGGY--HTCVLTSGGELYTWGSNENGCLGIG 323
             ++   + N    P ++  L      +V CG     T  LT+ G++++WG  + G LG G
Sbjct: 3226 GRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRG 3285

Query: 324  SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGG 382
              D    P  V+   +   V QV CG + + A++ +G++ TWG G               
Sbjct: 3286 GSDGCAIPMNVER-LNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYF------------ 3332

Query: 383  QLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            +LGHG D     PT+V      + + V+ G  H  A+
Sbjct: 3333 RLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLAV 3369



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 133/300 (44%), Gaps = 19/300 (6%)

Query: 44   GNGDYGRLGLGSLESRWRPVVCSAFEKHSLK---ALACGGAHTLFLTETGCVYATGLNDF 100
            G G  GRLGLG   +   P   + +  H L    A+  GG H L LT  G VY+ G  + 
Sbjct: 3115 GEGTNGRLGLGHSNNVSTPRA-NPYLSHVLVRRVAVHSGGKHALALTADGKVYSWGEGED 3173

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            G+LG    I      L  S   + V+ I+ G  HS+ +T  G LY WG    G+LG G  
Sbjct: 3174 GKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDD 3233

Query: 161  AAKVIPIPTKVECLSGIFTKQAALGFE--QSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
              ++  +P  VE L+     Q A G    Q++A+T  GKV SWG G  G+LG G      
Sbjct: 3234 NIQL--VPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGG----- 3286

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA 278
                S     P  ++ L  + V     G   S  +  +G V+ +G     ++      H 
Sbjct: 3287 ----SDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHV 3342

Query: 279  RRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            RRP+L+  L       V  G  H   +TS  +++ WG N++G  G G+  V   P  V G
Sbjct: 3343 RRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVNRRPALVAG 3402



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 129/285 (45%), Gaps = 21/285 (7%)

Query: 56   LESRWRPVVCSAFEKHSLKALAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL 113
            ++S  +P + ++ +   +  +AC  GG H L L+  G VY+ G  + G+LG    + Y  
Sbjct: 4021 IDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDR 4080

Query: 114  EPL--RISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKV 171
              L   +SGL  EVV I+ G  HS+ +T  G +Y WGK   G+LG G    ++  IP  V
Sbjct: 4081 PKLITALSGL--EVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQL--IPKLV 4136

Query: 172  ECLSGIFTKQAALGF--EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            E LS       A G    Q++ +T    V SWG G  G+LG G          S     P
Sbjct: 4137 EALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGG---------SEGCKLP 4187

Query: 230  RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-- 287
              I  L+G++V     G   S  + + G VY +G     ++      H RRP  ++ +  
Sbjct: 4188 MRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQG 4247

Query: 288  PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                 +  G  H    T  GE+YTWG N+ G LG G+      P 
Sbjct: 4248 KMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPR 4292



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 162/377 (42%), Gaps = 41/377 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDFG 101
            WG+   G+LG         P  C A    +   L  GG  TLF +T  G VYATG    G
Sbjct: 3956 WGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLV-GGEQTLFAVTPDGKVYATGYG-AG 4013

Query: 102  QLGISENIGYSLEPLRISGLKK---EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
                   I    +P  ++ ++      V  ++G  H  A++ DGE+Y WG+  +G+LG G
Sbjct: 4014 GRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHG 4073

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             + +     P  +  LSG+     A G   S  +T  G++ +WG G  GRLGHG      
Sbjct: 4074 NRVS--YDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGD----- 4126

Query: 219  GFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
                S  +  P+L++ L   +V   A  +G   + CI ++  V+ +GD    K+      
Sbjct: 4127 ----SEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSE 4182

Query: 277  HARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
              + P  I  L      +V CG   +  L   G +YTWG  +   LG GS + +  P RV
Sbjct: 4183 GCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRV 4242

Query: 335  QGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYI 393
             G      +  ++ G  H  A ++ G++ TW            G +  GQLG G  +   
Sbjct: 4243 TG-MQGKMIVSIATGSLHCVACTDTGEVYTW------------GDNDEGQLGDGTTLAAQ 4289

Query: 394  HPTIVNFGENVKALQVS 410
             P +      + ALQV+
Sbjct: 4290 RPRL------LMALQVN 4300



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 23/250 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
            WG G+ G+LG G+  +   P +  +     + ++ACG AH+  +T  G +Y  GL ++G+
Sbjct: 3168 WGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYGR 3227

Query: 103  LGISENIGYSLEPLRISGLKK-EVVQISTGYHHSS--AITVDGELYMWGKNSNGQLGLGK 159
            LG  ++    L P  +  L    V+Q++ G   +   A+T  G+++ WG    G+LG G 
Sbjct: 3228 LGHGDD-NIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGG 3286

Query: 160  KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
                 IP+   VE L+ +   Q   G + S+A+T  G+V +WG G   RLGHG ++ +  
Sbjct: 3287 SDGCAIPM--NVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHV-- 3342

Query: 220  FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHA- 278
                     P L++ L G +V   A G LH   +    +V+ +GD        Q+GN   
Sbjct: 3343 -------RRPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHG----QQGNGTT 3391

Query: 279  ---RRPSLIS 285
               RRP+L++
Sbjct: 3392 CVNRRPALVA 3401



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 128/284 (45%), Gaps = 31/284 (10%)

Query: 143  ELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
            ++++WG N   QLG G K +KV  +P     LS +     A G +    V+  GK+ + G
Sbjct: 3058 KVFVWGLNDKDQLG-GVKGSKV-KVPVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115

Query: 203  AGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVY 260
             G +GRLG G  +++          TPR    L  V V+  A  +G  H+  +  +G+VY
Sbjct: 3116 EGTNGRLGLGHSNNV---------STPRANPYLSHVLVRRVAVHSGGKHALALTADGKVY 3166

Query: 261  IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
             +G+    K+          P LI  L       + CG  H+  +T+ G LYTWG  E G
Sbjct: 3167 SWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGEYG 3226

Query: 319  CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWK--HTAAISE-GKILTWGWGGSHGTFSE 375
             LG G  ++   P+ V+   +   V QV+CG +   T A++  GK+ +WG     G F  
Sbjct: 3227 RLGHGDDNIQLVPKMVEA-LANYRVIQVACGSRDAQTLALTACGKVFSWG----DGDF-- 3279

Query: 376  DGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  G+LG G       P  V    ++   QV CG   + AL
Sbjct: 3280 ------GKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLAL 3317



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 116/303 (38%), Gaps = 81/303 (26%)

Query: 144  LYMWGKNSNGQLGLGKKAAKV--------------------------------------- 164
            +Y WG N  GQLG G + AKV                                       
Sbjct: 3953 VYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYG 4011

Query: 165  ------------IPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLG 210
                        +  PT +  +  +F  + A   G +  +A++  G+V SWG G  G+LG
Sbjct: 4012 AGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLG 4071

Query: 211  HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
            HG            S   P+LI  L G++V   A G  HSAC+   GR+Y +G     ++
Sbjct: 4072 HGNR---------VSYDRPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRL 4122

Query: 271  LFQEGNHARRPSLISKLPYSE--EVVCGG--YHTCVLTSGGELYTWGSNENGCLGIGSID 326
               +      P L+  L      +V CG     T  +T    +++WG  + G LG G  +
Sbjct: 4123 GHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSE 4182

Query: 327  VLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLG 385
                P R+        V +V CG + + A+ + G + TWG G  H            +LG
Sbjct: 4183 GCKLPMRIDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYH------------RLG 4229

Query: 386  HGN 388
            HG+
Sbjct: 4230 HGS 4232



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 125/304 (41%), Gaps = 48/304 (15%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLK-KEVVQIST- 130
           ++ +AC     L LT  G VY    +             ++ P  + GL+ K + Q+S  
Sbjct: 485 IQQIACAEKLALLLTHDGAVYTLPYD-------------TMTPHLVPGLESKTITQVSCH 531

Query: 131 --GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
             G H+    +  G  + WG   +G+LG G  AA+  P P  +  L+     + A G   
Sbjct: 532 SLGRHYLCRSSCGGA-WSWGIGEDGRLGHGDTAARDAPQP--LHHLAHHEVVRVAAGLAC 588

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIK----ELEGVKVKIAA 244
           S  +T  G + +WG G  GRLGHG   + L         TP+ +      +E +      
Sbjct: 589 SAVITSRGALYTWGRGAQGRLGHGTIENCL---------TPQPVSFNAHNIERIIDVALG 639

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCV 302
            G   + C    G V +FG+             A  P  +S L       V  G +    
Sbjct: 640 WGEGSTLCCTWEGAVQVFGE-----------GEAGTPRALSALAMFRVTRVYTGEHWHAA 688

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKI 361
           LT GG++YTWG  +   LG G+++    P+ V+       VD +S G  H  A+ SEG +
Sbjct: 689 LTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVD-LSLGASHGIALSSEGVL 747

Query: 362 LTWG 365
             WG
Sbjct: 748 FVWG 751



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 28/226 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG G+ GRLG G   +R  P        H +  +A G A +  +T  G +Y  G    G+
Sbjct: 549 WGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGR 608

Query: 103 L--GISENIGYSLEPLRISGLKKE-VVQISTGYHHSSAI--TVDGELYMWGKNSNGQLGL 157
           L  G  EN   + +P+  +    E ++ ++ G+   S +  T +G + ++G+   G    
Sbjct: 609 LGHGTIENC-LTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAG---- 663

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
                     P  +  L+     +   G     A+T GG+V +WG G   RLGHG   S 
Sbjct: 664 ---------TPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMEST 714

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
                      P+L++ L+G+K+   + G  H   +   G ++++G
Sbjct: 715 ---------KIPKLVEALQGIKIVDLSLGASHGIALSSEGVLFVWG 751



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 24/154 (15%)

Query: 274  EGNHARRPSLISKLPYSEEV-VCGGYHTC-VLTSGGELYTWGSNENGCLGIGSIDVLHSP 331
            EG   R P+    L     V + GG  T   +T  G++Y  G    G LGIG ID +  P
Sbjct: 3968 EGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGAGGRLGIGGIDSVSQP 4027

Query: 332  E---RVQGPFSESPVDQVSC--GWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLG 385
                 +Q  F    + +V+C  G KH  A+S +G++ +WG G       EDG     +LG
Sbjct: 4028 TLLASIQHVF----ITKVACNSGGKHCLALSADGEVYSWGEG-------EDG-----KLG 4071

Query: 386  HGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            HGN V Y  P ++     ++ + ++CG  H+  L
Sbjct: 4072 HGNRVSYDRPKLITALSGLEVVCIACGGAHSACL 4105



 Score = 38.5 bits (88), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 41/184 (22%)

Query: 275 GNHARR--PSLISKLPYSEEVVCGGYHTC--VLTSGGELYTWGSNENGCLGIGSIDVLHS 330
           G+ A R  P  +  L + E V       C  V+TS G LYTWG    G LG G+I+   +
Sbjct: 560 GDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLT 619

Query: 331 PERVQGPFSESPVDQ---VSCGWKHTAAIS---EGKILTWGWGGS--------------- 369
           P+ V   F+   +++   V+ GW   + +    EG +  +G G +               
Sbjct: 620 PQPVS--FNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGTPRALSALAMFRVT 677

Query: 370 --------HGTFSEDGHS------SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH 415
                   H   ++ G         G +LGHGN      P +V   + +K + +S G +H
Sbjct: 678 RVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASH 737

Query: 416 TGAL 419
             AL
Sbjct: 738 GIAL 741


>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 383

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 148/308 (48%), Gaps = 44/308 (14%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA--- 182
           + IS G  HS  +T+DG+L++WGK   G+LG G++ +  +P       L+ +F + +   
Sbjct: 35  IGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSVFVP------NLNPLFEEHSIRC 87

Query: 183 -ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            ALG   SVA+T  G V +WG GG G LGH            T E  PR + +    K+ 
Sbjct: 88  IALGGLHSVALTHQGDVFTWGYGGFGALGHKV---------YTRELVPRRVDDSWDCKIS 138

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------QEGNHARRPSLISKLPYS-EEV 293
             A    H+A I E+G +Y++G    D  L         EG     PS +  L      V
Sbjct: 139 AIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASV 198

Query: 294 VCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSES-PVDQVSCGWKH 352
            CGG+ T  LT  G+L+ WG+N N  LG G  D L   E +  P  E   + Q++CG  H
Sbjct: 199 SCGGFFTMALTKEGQLWNWGANSNYELGRG--DNLGGWEPMPVPSLEGVRITQIACGGYH 256

Query: 353 TAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSC 411
           + A++E GK+L+WG GG             GQLG  +  +   PT +    + K + ++ 
Sbjct: 257 SLALTEEGKVLSWGHGGH------------GQLGSSSLRNQKVPTEIEALADKKIVFIAS 304

Query: 412 GFNHTGAL 419
           G + + A+
Sbjct: 305 GGSSSAAI 312



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 145/310 (46%), Gaps = 27/310 (8%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG GD GRLG G   S + P +   FE+HS++ +A GG H++ LT  G V+  G   FG
Sbjct: 54  IWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFG 113

Query: 102 QLGISENIGYSLEPLRI-SGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
            LG  +     L P R+      ++  I+T   H++AIT  GELYMWG+           
Sbjct: 114 ALG-HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 161 AAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
                    + +P+KV+ L+      +  GF  ++A+T  G++ +WGA  +  LG G   
Sbjct: 173 GRGPNEGGGLSVPSKVKALTVPVASVSCGGF-FTMALTKEGQLWNWGANSNYELGRGD-- 229

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
                  +   + P  +  LEGV++   A G  HS  + E G+V  +G     ++     
Sbjct: 230 -------NLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSL 282

Query: 276 NHARRPSLISKLPYSEEV--VCGGYHTCV-------LTSGGELYTWGSNENGCLGI-GSI 325
            + + P+ I  L   + V    GG  +         LT GGEL+ WG+ ++  LG+ G  
Sbjct: 283 RNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLP 342

Query: 326 DVLHSPERVQ 335
           ++  +P  V 
Sbjct: 343 EIQTTPVEVN 352



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 168 PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
           P +++  S  F    + G   S  +T  G +  WG G  GRLG GQE+S+         +
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKGDGGRLGFGQENSV---------F 72

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR---AVDKMLFQEGNHARRPSLI 284
            P L    E   ++  A G LHS  +   G V+ +G     A+   ++      RR    
Sbjct: 73  VPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDS 132

Query: 285 SKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV-------LHSPERVQGP 337
                S  +   G HT  +T  GELY WG  E                  L  P +V+  
Sbjct: 133 WDCKISA-IATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKA- 190

Query: 338 FSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
               PV  VSCG   T A++ EG++  W WG +          S  +LG G+++    P 
Sbjct: 191 -LTVPVASVSCGGFFTMALTKEGQL--WNWGAN----------SNYELGRGDNLGGWEPM 237

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
            V   E V+  Q++CG  H+ AL E
Sbjct: 238 PVPSLEGVRITQIACGGYHSLALTE 262


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 155/331 (46%), Gaps = 31/331 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G  +    P +  +    ++  +ACG  HT  ++ +G ++    G N+ 
Sbjct: 289 WGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNS 348

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+SG  +  +V+ I+ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 349 GLLGHGTDVSHWI-PKRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHG 407

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT----------GGGKVLSWGAGGSGR 208
            +  K +  P +++ L+G+ T + A G   + A+              K+ +WG G   R
Sbjct: 408 DR--KSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHR 465

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L     +  A G   +  +  +G V+  G  A  
Sbjct: 466 LGHGNKDAYL---------LPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYG 516

Query: 269 KMLFQEGNHARRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
           + L    ++ + P L+       + EE+ CG YHT VLTS  E++TWG   NG LG G  
Sbjct: 517 Q-LGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDT 575

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           +    P  V+    E  V  +SCG   T++I
Sbjct: 576 EDRKLPTLVEA-LKERHVKNLSCGANFTSSI 605



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 181/403 (44%), Gaps = 55/403 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKH---SLKALACGGAHTLFLTETGCVYATGLN 98
           +W +G +    + S+ ++   +     E +    +  ++CG  H   +T  G V+  G  
Sbjct: 233 IWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEE 292

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLG 156
             G+LG      ++   L  S     +  ++ G +H+ AI+  G+L+ WG  SN  G LG
Sbjct: 293 SGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLG 352

Query: 157 LGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
            G   +  IP   +V   L G+     A G   S   T  GK+ ++G G  G LGHG   
Sbjct: 353 HGTDVSHWIP--KRVSGPLEGLQVLSIACGTWHSALATSNGKLFTFGDGTFGALGHGDRK 410

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE----------NGRVYIFGDR 265
           S+          +P+ ++ L G+K    A G  H+A I E          + +++ +GD 
Sbjct: 411 SV---------SSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDG 461

Query: 266 AVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
             DK     GN      P+ +S L  Y+ +++ CG   T  LT+ G ++T G +  G LG
Sbjct: 462 --DKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFTMGGSAYGQLG 519

Query: 322 I----GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSED 376
                G I  L   +R+ G F    V+++SCG  HTA + S  ++ TWG G +       
Sbjct: 520 NPSSNGKIPCLVQ-DRLVGEF----VEEISCGAYHTAVLTSRSEVFTWGRGAN------- 567

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                GQLGHG+  D   PT+V   +      +SCG N T ++
Sbjct: 568 -----GQLGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSI 605



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 105/202 (51%), Gaps = 19/202 (9%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V   + G  H A +   G V+ +G+ +  ++     +H   P L+  L
Sbjct: 255 TPKPLESNVVLDVHQISCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESL 314

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
             +  + V CG YHTC +++ G+L+TWG  SN +G LG G+ DV H  P+RV GP     
Sbjct: 315 AVTNIDYVACGEYHTCAISTSGDLFTWGDGSNNSGLLGHGT-DVSHWIPKRVSGPLEGLQ 373

Query: 343 VDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++CG  H+A A S GK+ T+G     GTF        G LGHG+      P  +   
Sbjct: 374 VLSIACGTWHSALATSNGKLFTFG----DGTF--------GALGHGDRKSVSSPKELQSL 421

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
             +K ++V+CG  HT A++E +
Sbjct: 422 NGLKTIKVACGVWHTAAIVEVM 443



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 4/162 (2%)

Query: 33  STLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           S +  R    WG+GD  RLG G+ ++   P   S+   ++ + LACG   T+ LT +G V
Sbjct: 448 SNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHV 507

Query: 93  YATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSN 152
           +  G + +GQLG   + G     ++   + + V +IS G +H++ +T   E++ WG+ +N
Sbjct: 508 FTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGAN 567

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
           GQLG G    +   +PT VE L     K  + G  F  S+ +
Sbjct: 568 GQLGHGDTEDR--KLPTLVEALKERHVKNLSCGANFTSSICI 607


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 152/333 (45%), Gaps = 33/333 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +  A    + + +ACG  H   +T +G +Y+   G ++ 
Sbjct: 336 WGEESGGRLGHGVDCDVSHPQLVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNL 395

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   +I + + P R++G  +   V  I+ G  H++ +T  G L+ +G  + G LG  
Sbjct: 396 GLLGHGNDISHWI-PKRVNGPLEGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHN 454

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGGS 206
            +  K    P +VE L G+ T +AA G   + AV               GK+ +WG G  
Sbjct: 455 DR--KSAYSPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEK 512

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           GRLGHG +   L          P  +  L     +  A G+  +  +   G V+  G   
Sbjct: 513 GRLGHGDKEQRL---------VPTCVAALVDHNFRQVACGYSLTVALTTKGGVFTMGSST 563

Query: 267 VDKMLFQEGNHARRPSLIS-KL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIG 323
             ++   + +  + P L+  KL   Y E++ CG +H  VLT   E+YTWG   NG LG G
Sbjct: 564 YGQLGDPQAD-GKLPGLVEGKLVEAYVEDIACGAHHVAVLTHNSEVYTWGKGANGRLGHG 622

Query: 324 SIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            ++  ++P  V+    E  V  ++CG   TAAI
Sbjct: 623 DLEDRNTPTLVEA-LKEKQVKSIACGATFTAAI 654



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 44/366 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STG 131
           ++ +ACGG H   +T+ G V+  G    G+LG   +   S  P  +  L     ++ + G
Sbjct: 314 VQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVS-HPQLVEALASSTTEVVACG 372

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQ 188
            +H+ A+T+ G+LY WG  ++  G LG G   +  IP   +V   L G+     A G   
Sbjct: 373 EYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIP--KRVNGPLEGLRVASIACGPWH 430

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  VT  G + ++G G  G LGH    S          Y+PR ++ L+G++   AA G  
Sbjct: 431 TALVTTTGLLFTFGDGTFGVLGHNDRKSA---------YSPREVESLKGLRTVRAACGVW 481

Query: 249 HSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVV 294
           H+A + E            +G+++ +GD    ++   +      P+ ++ L      +V 
Sbjct: 482 HTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHNFRQVA 541

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
           CG   T  LT+ G ++T GS+  G LG    D    P  V+G   E+ V+ ++CG  H A
Sbjct: 542 CGYSLTVALTTKGGVFTMGSSTYGQLGDPQADG-KLPGLVEGKLVEAYVEDIACGAHHVA 600

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++   ++ TWG G +            G+LGHG+  D   PT+V   +  +   ++CG 
Sbjct: 601 VLTHNSEVYTWGKGAN------------GRLGHGDLEDRNTPTLVEALKEKQVKSIACGA 648

Query: 414 NHTGAL 419
             T A+
Sbjct: 649 TFTAAI 654



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 53/316 (16%)

Query: 131 GYHHSSAITVDGELYMWGKNSNG--------QLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
           G H++  +   G++YMWG+            ++G G        +P  +E    +  +  
Sbjct: 261 GLHYAEPL---GDVYMWGEGVGDGILGGGIHRIGSGGAINLDALLPKPLESALVLDVQLI 317

Query: 183 ALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           A G + +  VT  G+V +WG    GRLGHG +  +           P+L++ L     ++
Sbjct: 318 ACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDV---------SHPQLVEALASSTTEV 368

Query: 243 AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCG 296
            A G  H+  +  +G +Y +GD   +  L   GN      P  ++  P        + CG
Sbjct: 369 VACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNG-PLEGLRVASIACG 427

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
            +HT ++T+ G L+T+G    G LG       +SP  V+       V + +CG  HTAA+
Sbjct: 428 PWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTV-RAACGVWHTAAV 486

Query: 357 SE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            E             GK+ TWG          DG    G+LGHG+    + PT V    +
Sbjct: 487 VEVMVGSSSAGSCSSGKLFTWG----------DGEK--GRLGHGDKEQRLVPTCVAALVD 534

Query: 404 VKALQVSCGFNHTGAL 419
               QV+CG++ T AL
Sbjct: 535 HNFRQVACGYSLTVAL 550



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 19/201 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V++ A G  H+A + + G V+ +G+ +  ++          P L+  L 
Sbjct: 303 PKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEALA 362

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSNEN--GCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  E V CG YH C +T  G+LY+WG   +  G LG G+ D+ H  P+RV GP     V
Sbjct: 363 SSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGN-DISHWIPKRVNGPLEGLRV 421

Query: 344 DQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             ++CG  HTA ++  G + T+G     GTF        G LGH +      P  V   +
Sbjct: 422 ASIACGPWHTALVTTTGLLFTFG----DGTF--------GVLGHNDRKSAYSPREVESLK 469

Query: 403 NVKALQVSCGFNHTGALLEYV 423
            ++ ++ +CG  HT A++E +
Sbjct: 470 GLRTVRAACGVWHTAAVVEVM 490


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPA 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWG 335



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 138/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLMPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  +   G VY++G     ++      +   P  IS L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPVVVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 LAHTSAAKTQGGHVYMWG 335



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR +  L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 80  LGDVQSTIE--PRRLDSLSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 137

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 138 HGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRR 197

Query: 334 VQGPFSESPVDQVSCGWK-HTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG     A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 198 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 245

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  ++  + ++  +V+CG+ HT  L +
Sbjct: 246 PTPCRISALQGIRVQRVACGYAHTLVLTD 274



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHIVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  + + GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVVN--IACGQMCSMAVVNTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRISA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +P  V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPAPVVVEKDRIIEIAACHLAHTSA 323



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   SA +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHLAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 172/365 (47%), Gaps = 47/365 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLK--KEVVQISTG 131
           +ACG  H  F+T  G ++  G    G+LG  I +++     P  +  L     V  ++ G
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDV---FHPRLVESLTATSSVDFVACG 342

Query: 132 YHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
             H+ A+T+ GELY WG  ++  G LG G   +  IP      CL G+       G   +
Sbjct: 343 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIP-KRIAGCLEGLHVASVTCGPWHT 401

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
             +T  G++ ++G G  G LGHG         R T +Y PR ++ L G++    + G  H
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGD--------RETVQY-PREVESLSGLRTIAVSCGVWH 452

Query: 250 SACIDE------------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVC 295
           +A + E            +G+++ +GD   +++   + +   +P+ +  L  Y+  ++ C
Sbjct: 453 TAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIAC 512

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G   T  LT+ G+++T GS   G LG    D    P  V+   +   V+++SCG  H AA
Sbjct: 513 GHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDG-KLPCLVEDKLASEFVEEISCGAYHVAA 571

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + S  ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N
Sbjct: 572 LTSRNEVYTWGKGAN------------GRLGHGDLEDRKVPTLVEALKDRHVKYIACGSN 619

Query: 415 HTGAL 419
           +T A+
Sbjct: 620 YTAAI 624



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 151/334 (45%), Gaps = 34/334 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLND 99
           WG    GRLG G  +  + P +V S     S+  +ACG  HT  +T  G +Y    G ++
Sbjct: 305 WGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHN 364

Query: 100 FGQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
            G LG   +I + + P RI+G  +   V  ++ G  H++ IT  G L+ +G  + G LG 
Sbjct: 365 VGLLGHGSDISHWI-PKRIAGCLEGLHVASVTCGPWHTALITSYGRLFTFGDGTFGVLGH 423

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT------------GGGKVLSWGAGG 205
           G +  + +  P +VE LSG+ T   + G   + AV               GK+ +WG G 
Sbjct: 424 GDR--ETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGD 481

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
             RLGHG +   L          P  +  L        A G   +  +  +G+V+  G  
Sbjct: 482 KNRLGHGDKDPRL---------KPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS- 531

Query: 266 AVDKMLFQEGNHARRPSLI-SKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
            V   L       + P L+  KL   + EE+ CG YH   LTS  E+YTWG   NG LG 
Sbjct: 532 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 591

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G ++    P  V+    +  V  ++CG  +TAAI
Sbjct: 592 GDLEDRKVPTLVEA-LKDRHVKYIACGSNYTAAI 624



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 101/207 (48%), Gaps = 20/207 (9%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           T    P+ ++    + V   A G  H+A +   G ++ +G+ +  ++    G     P L
Sbjct: 267 TDVLVPKPLESNIVLDVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRL 326

Query: 284 ISKLPYSEEV---VCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGP 337
           +  L  +  V    CG +HTC +T  GELYTWG  ++  G LG GS D+ H  P+R+ G 
Sbjct: 327 VESLTATSSVDFVACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGS-DISHWIPKRIAGC 385

Query: 338 FSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPT 396
                V  V+CG  HTA I S G++ T+G     GTF        G LGHG+     +P 
Sbjct: 386 LEGLHVASVTCGPWHTALITSYGRLFTFG----DGTF--------GVLGHGDRETVQYPR 433

Query: 397 IVNFGENVKALQVSCGFNHTGALLEYV 423
            V     ++ + VSCG  HT A++E +
Sbjct: 434 EVESLSGLRTIAVSCGVWHTAAVVEII 460



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 27/53 (50%)

Query: 31  ISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHT 83
           +++   R     WG G  GRLG G LE R  P +  A +   +K +ACG  +T
Sbjct: 569 VAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYT 621


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 179/389 (46%), Gaps = 36/389 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
           +WG  D  +LG         PV     ++  +  +  GG+ +LF +T  G VYA G +  
Sbjct: 434 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV-IGGSKSLFAVTMGGKVYACGESTS 492

Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G+LG   ++ ++    + L    +KK  + + +G  H+ A+T DG +Y WG    G+LG 
Sbjct: 493 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 550

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G +A  + P   K+E       +  + G   S A+   G + +WG G  GRLGHG   ++
Sbjct: 551 GSRADALTP--RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 608

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEG 275
           L          P+ ++ L G +V   A G     + C+ ++G VY +GD    K+     
Sbjct: 609 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 659

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +    P  + +L   +  ++ CG   +  L+  G ++TWG  +   LG GS   +  P+ 
Sbjct: 660 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 719

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V+G   E  V  V+ G  H  A++E G++  WG         ++ H   GQ G+G     
Sbjct: 720 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG---------DNDH---GQQGNGGTTVN 766

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   E VK  +++CG +H+ A  +
Sbjct: 767 RKPMKVQGLEGVKITKLACGSSHSIAFAD 795



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 158/350 (45%), Gaps = 22/350 (6%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKA 75
           Q +K+   +G  K   + T+  +  A  G    GRLGLG +      +    F +  +K 
Sbjct: 461 QRLKVTQVIGGSKSLFAVTMGGKVYAC-GESTSGRLGLGPVTGSVSRLTQVLFPQ-PIKK 518

Query: 76  LAC--GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           LA   GG H + LT  G VY+ G  + G+LG       +L P +I    ++ ++ IS G 
Sbjct: 519 LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRAD-ALTPRKIETFPEKCIRDISCGS 577

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSV 190
            HS+AI   G LY WG    G+LG G     + P P  V+ LSG    Q A G    Q++
Sbjct: 578 SHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKP--VQALSGQQVVQVACGSRDAQTL 635

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            +T  G V SWG G  G+LG G                P+ ++ L G  V     G   S
Sbjct: 636 CLTQDGLVYSWGDGDFGKLGRGGSDGCC---------VPKPVERLSGQDVVKIECGAQFS 686

Query: 251 ACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGE 308
             +   G V+ +G     ++      H RRP ++  L   +  +V  G  H   +T GG+
Sbjct: 687 LALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQ 746

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           ++ WG N++G  G G   V   P +VQG      + +++CG  H+ A ++
Sbjct: 747 VFAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 795



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 174/389 (44%), Gaps = 39/389 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P+ C +    +LK +   GG  TLF +T  G V+ATG    
Sbjct: 1412 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1469

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
            G+LGI  N   ++  L  S     + Q+S   G  H  A++ +GE+Y WG+  +G+LG G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1529

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +++  +  P  +E L G    + A G   S A+   G + +WG G  GRLGH       
Sbjct: 1530 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1582

Query: 219  GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGDRAVDKMLF 272
                S  +  P+L+  L + + V +A   G   + CI E    +  V+ +GD    K+  
Sbjct: 1583 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1638

Query: 273  QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
               +  + P++I  L   +   V CG   +  L+  G +YTWG  +   LG GS + +  
Sbjct: 1639 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1698

Query: 331  PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
            P+ ++       V +VS G  H  AA+  G + TW            G +  GQ+G G  
Sbjct: 1699 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTW------------GDNDEGQIGDGTT 1745

Query: 390  VDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 P +V   +      VSCG  HT A
Sbjct: 1746 QATQIPRLVAALQGHHISHVSCGSAHTVA 1774



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 39/352 (11%)

Query: 83   TLFLTETGCVYATGLNDFGQLGISE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            TL    +G ++  G N  GQLG  E   +   +    ++ LK   +Q+  G      +T 
Sbjct: 1400 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKP--IQLVGGEQTLFTVTG 1457

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            +G+++  G  + G+LG+G   +  + IPT +E +  +   Q ++  G +  +A++  G+V
Sbjct: 1458 EGKVFATGYGAGGRLGIGSNES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1515

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  SS+           PR+I+ L G  +   A G  HSA I+  G 
Sbjct: 1516 YSWGEGVDGKLGHGNRSSL---------DHPRIIESLRGDLIVKVATGGSHSAAINATGG 1566

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG--YHTCVLTSG----GELY 310
            +Y +G     ++  ++     +P L++ L  +   +V CG     T  +T G      ++
Sbjct: 1567 LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVW 1626

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            +WG  + G LG G  D    P  +     +  +  V+CG + + A+S+ G + TWG G  
Sbjct: 1627 SWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH-ITHVACGSQFSLALSKAGGVYTWGKGDY 1685

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +            +LGHG+D     P ++     +K ++VS G  H  A ++
Sbjct: 1686 Y------------RLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVD 1725



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 120/283 (42%), Gaps = 28/283 (9%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            ++++WG N   QLG  K +    P+ +K   L  +   Q   G +   AVT GGKV + 
Sbjct: 430 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 487

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SGRLG G  +  +   R T    P+ IK+L         +G  H+  +  +G VY 
Sbjct: 488 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYS 539

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +GD    K+       A  P  I   P     ++ CG  H+  + S G LYTWG    G 
Sbjct: 540 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 599

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGTFSED 376
           LG G+   L  P+ VQ   S   V QV+CG +    +    +G + +WG     G F   
Sbjct: 600 LGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWG----DGDF--- 651

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                G+LG G       P  V        +++ CG   + AL
Sbjct: 652 -----GKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 689



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 26/222 (11%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             KV  WG     +LG          L+ +   TP   K+L+ +KV     G      + 
Sbjct: 429 AAKVFVWGLNDKDQLGG---------LKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVT 479

Query: 255 ENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYT 311
             G+VY  G+    ++      G+ +R   ++   P  +  V  GG H   LT  G +Y+
Sbjct: 480 MGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYS 539

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           WG  E G LG GS     +P +++  F E  +  +SCG  H+AAI S G + TWG    H
Sbjct: 540 WGDGEEGKLGHGSRADALTPRKIET-FPEKCIRDISCGSSHSAAIGSSGTLYTWG----H 594

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G +        G+LGHGN+   + P  V      + +QV+CG
Sbjct: 595 GMY--------GRLGHGNNHTLLKPKPVQALSGQQVVQVACG 628


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 179/389 (46%), Gaps = 36/389 (9%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLF-LTETGCVYATGLNDF 100
           +WG  D  +LG         PV     ++  +  +  GG+ +LF +T  G VYA G +  
Sbjct: 433 VWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV-IGGSKSLFAVTMGGKVYACGESTS 491

Query: 101 GQLG---ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           G+LG   ++ ++    + L    +KK  + + +G  H+ A+T DG +Y WG    G+LG 
Sbjct: 492 GRLGLGPVTGSVSRLTQVLFPQPIKK--LAVHSGGRHAMALTYDGHVYSWGDGEEGKLGH 549

Query: 158 GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSI 217
           G +A  + P   K+E       +  + G   S A+   G + +WG G  GRLGHG   ++
Sbjct: 550 GSRADALTP--RKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTL 607

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF--LHSACIDENGRVYIFGDRAVDKMLFQEG 275
           L          P+ ++ L G +V   A G     + C+ ++G VY +GD    K+     
Sbjct: 608 L---------KPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRGGS 658

Query: 276 NHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           +    P  + +L   +  ++ CG   +  L+  G ++TWG  +   LG GS   +  P+ 
Sbjct: 659 DGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQV 718

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V+G   E  V  V+ G  H  A++E G++  WG         ++ H   GQ G+G     
Sbjct: 719 VEG-LREHKVVDVAVGALHCLAVTEGGQVFAWG---------DNDH---GQQGNGGTTVN 765

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  V   E VK  +++CG +H+ A  +
Sbjct: 766 RKPMKVQGLEGVKITKLACGSSHSIAFAD 794



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 157/349 (44%), Gaps = 20/349 (5%)

Query: 16  QDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLK- 74
           Q +K+   +G  K   + T+  +  A  G    GRLGLG +      +    F +   K 
Sbjct: 460 QRLKVTQVIGGSKSLFAVTMGGKVYAC-GESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL 518

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYH 133
           A+  GG H + LT  G VY+ G  + G+LG       +L P +I    ++ ++ IS G  
Sbjct: 519 AVHSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRAD-ALTPRKIETFPEKCIRDISCGSS 577

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFE--QSVA 191
           HS+AI   G LY WG    G+LG G     + P P  V+ LSG    Q A G    Q++ 
Sbjct: 578 HSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKP--VQALSGQQVVQVACGSRDAQTLC 635

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
           +T  G V SWG G  G+LG G                P+ ++ L G  V     G   S 
Sbjct: 636 LTQDGLVYSWGDGDFGKLGRGGSDGCC---------VPKPVERLSGQDVVKIECGAQFSL 686

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGEL 309
            +   G V+ +G     ++      H RRP ++  L   +  +V  G  H   +T GG++
Sbjct: 687 ALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTEGGQV 746

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
           + WG N++G  G G   V   P +VQG      + +++CG  H+ A ++
Sbjct: 747 FAWGDNDHGQQGNGGTTVNRKPMKVQG-LEGVKITKLACGSSHSIAFAD 794



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 174/389 (44%), Gaps = 39/389 (10%)

Query: 43   WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALA-CGGAHTLF-LTETGCVYATGLNDF 100
            WG+   G+LG         P+ C +    +LK +   GG  TLF +T  G V+ATG    
Sbjct: 1411 WGHNHRGQLGGPEGAKVKIPIPCPSLA--ALKPIQLVGGEQTLFTVTGEGKVFATGYGAG 1468

Query: 101  GQLGISENIGYSLEPLRISGLKKEVVQIST--GYHHSSAITVDGELYMWGKNSNGQLGLG 158
            G+LGI  N   ++  L  S     + Q+S   G  H  A++ +GE+Y WG+  +G+LG G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGVDGKLGHG 1528

Query: 159  KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
             +++  +  P  +E L G    + A G   S A+   G + +WG G  GRLGH       
Sbjct: 1529 NRSS--LDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED----- 1581

Query: 219  GFLRSTSEYTPRLIKEL-EGVKVKIAAA-GFLHSACIDE----NGRVYIFGDRAVDKMLF 272
                S  +  P+L+  L + + V +A   G   + CI E    +  V+ +GD    K+  
Sbjct: 1582 ----SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGR 1637

Query: 273  QEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS 330
               +  + P++I  L   +   V CG   +  L+  G +YTWG  +   LG GS + +  
Sbjct: 1638 GGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRLGHGSDEHVRR 1697

Query: 331  PERVQGPFSESPVDQVSCGWKH-TAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
            P+ ++       V +VS G  H  AA+  G + TW            G +  GQ+G G  
Sbjct: 1698 PKLIES-LRGMKVVEVSVGSLHCIAAVDNGDVYTW------------GDNDEGQIGDGTT 1744

Query: 390  VDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                 P +V   +      VSCG  HT A
Sbjct: 1745 QATQIPRLVAALQGHHISHVSCGSAHTVA 1773



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 164/352 (46%), Gaps = 39/352 (11%)

Query: 83   TLFLTETGCVYATGLNDFGQLGISE--NIGYSLEPLRISGLKKEVVQISTGYHHSSAITV 140
            TL    +G ++  G N  GQLG  E   +   +    ++ LK   +Q+  G      +T 
Sbjct: 1399 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKP--IQLVGGEQTLFTVTG 1456

Query: 141  DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKV 198
            +G+++  G  + G+LG+G   +  + IPT +E +  +   Q ++  G +  +A++  G+V
Sbjct: 1457 EGKVFATGYGAGGRLGIGSNES--VAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEV 1514

Query: 199  LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR 258
             SWG G  G+LGHG  SS+           PR+I+ L G  +   A G  HSA I+  G 
Sbjct: 1515 YSWGEGVDGKLGHGNRSSL---------DHPRIIESLRGDLIVKVATGGSHSAAINATGG 1565

Query: 259  VYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG--YHTCVLTSG----GELY 310
            +Y +G     ++  ++     +P L++ L  +   +V CG     T  +T G      ++
Sbjct: 1566 LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVW 1625

Query: 311  TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGS 369
            +WG  + G LG G  D    P  +     +  +  V+CG + + A+S+ G + TWG G  
Sbjct: 1626 SWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH-ITHVACGSQFSLALSKAGGVYTWGKGDY 1684

Query: 370  HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            +            +LGHG+D     P ++     +K ++VS G  H  A ++
Sbjct: 1685 Y------------RLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVD 1724



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 120/283 (42%), Gaps = 28/283 (9%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
            ++++WG N   QLG  K +    P+ +K   L  +   Q   G +   AVT GGKV + 
Sbjct: 429 AKVFVWGLNDKDQLGGLKGSKHKTPVASKD--LQRLKVTQVIGGSKSLFAVTMGGKVYAC 486

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G   SGRLG G  +  +   R T    P+ IK+L         +G  H+  +  +G VY 
Sbjct: 487 GESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLA------VHSGGRHAMALTYDGHVYS 538

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +GD    K+       A  P  I   P     ++ CG  H+  + S G LYTWG    G 
Sbjct: 539 WGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGMYGR 598

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI---SEGKILTWGWGGSHGTFSED 376
           LG G+   L  P+ VQ   S   V QV+CG +    +    +G + +WG     G F   
Sbjct: 599 LGHGNNHTLLKPKPVQA-LSGQQVVQVACGSRDAQTLCLTQDGLVYSWG----DGDF--- 650

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                G+LG G       P  V        +++ CG   + AL
Sbjct: 651 -----GKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLAL 688



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 26/222 (11%)

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             KV  WG     +LG          L+ +   TP   K+L+ +KV     G      + 
Sbjct: 428 AAKVFVWGLNDKDQLGG---------LKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVT 478

Query: 255 ENGRVYIFGDRAVDKMLF--QEGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYT 311
             G+VY  G+    ++      G+ +R   ++   P  +  V  GG H   LT  G +Y+
Sbjct: 479 MGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYS 538

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           WG  E G LG GS     +P +++  F E  +  +SCG  H+AAI S G + TWG    H
Sbjct: 539 WGDGEEGKLGHGSRADALTPRKIET-FPEKCIRDISCGSSHSAAIGSSGTLYTWG----H 593

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G +        G+LGHGN+   + P  V      + +QV+CG
Sbjct: 594 GMY--------GRLGHGNNHTLLKPKPVQALSGQQVVQVACG 627


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 28/359 (7%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L  +   C  R I+ T ++     WG    GRLG G+ E   RP +  +    +
Sbjct: 248 LESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSN 307

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKK--EVVQIS 129
           ++ +ACG  HT  +T +G +Y  G   +    +   IG S   P R+SG  +  +V+ ++
Sbjct: 308 VEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVA 367

Query: 130 TGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
            G  HS+     G+++ +G  + G LG G +  + +  P +VE LSG  T + A G   S
Sbjct: 368 CGSWHSALAMSSGKVFTFGDGTFGALGHGNR--ENVAYPKEVESLSGFRTMKVACGVWHS 425

Query: 190 VAV------TG----GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVK 239
            A+      TG      K+ +WG G   RLGHG + + L          P +++ L    
Sbjct: 426 AAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARL---------VPTVVQALVDNN 476

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGG 297
               A G+  +  +  +G V+  G     ++   + +  +   +  KL     EE+ CG 
Sbjct: 477 FHQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGS 536

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           YH  VLTS  E+YTWG   NG LG G I+    P  V     +  V  ++CG   T  I
Sbjct: 537 YHVAVLTSRSEVYTWGMGANGRLGHGGIEDKKKPTIVDA-LKDRHVKSIACGSNFTTCI 594



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 160/365 (43%), Gaps = 44/365 (12%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ ++CG  H    T  G V+  G    G+LG   +   S   L  S     V  I+ G 
Sbjct: 256 VQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGE 315

Query: 133 HHSSAITVDGELYMWGKNS--NGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
            H+ A+T  G+LY WG  S   G LG G  A+  +P   +V   L G+     A G   S
Sbjct: 316 FHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLP--KRVSGPLEGLQVLSVACGSWHS 373

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
                 GKV ++G G  G LGHG   ++           P+ ++ L G +    A G  H
Sbjct: 374 ALAMSSGKVFTFGDGTFGALGHGNRENVA---------YPKEVESLSGFRTMKVACGVWH 424

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVC 295
           SA I E          + +++ +GD   DK     G+   R  P+++  L  +   +V C
Sbjct: 425 SAAIVETTSQTGVNMVSRKLFTWGDG--DKNRLGHGDKEARLVPTVVQALVDNNFHQVAC 482

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G   T  L + G ++T GS+  G LG    D    P +VQ   S   V+++SCG  H A 
Sbjct: 483 GYSMTIALATSGHVFTMGSSNYGQLGNPKADG-KQPCQVQDKLSSELVEEISCGSYHVAV 541

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + S  ++ TWG G +            G+LGHG   D   PTIV+  ++     ++CG N
Sbjct: 542 LTSRSEVYTWGMGAN------------GRLGHGGIEDKKKPTIVDALKDRHVKSIACGSN 589

Query: 415 HTGAL 419
            T  +
Sbjct: 590 FTTCI 594



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 134/300 (44%), Gaps = 45/300 (15%)

Query: 142 GELYMWGK------NSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
           G++Y+WG+       S G   L      V+ IP  +E    +  +Q + G       T  
Sbjct: 214 GDVYVWGEVWTDVIPSEGSSNLVCSKTDVL-IPKPLESDVVLDVQQISCGSRHIALTTRQ 272

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG    GRLGHG +  I           P+L++ L    V+  A G  H+  +  
Sbjct: 273 GEVFTWGEELGGRLGHGTDEDI---------SRPKLVESLAVSNVEYIACGEFHTCAVTA 323

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGELY 310
           +G +Y +GD + +  L   G  A    P  +S      +V+   CG +H+ +  S G+++
Sbjct: 324 SGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVF 383

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG----------- 359
           T+G    G LG G+ + +  P+ V+   S     +V+CG  H+AAI E            
Sbjct: 384 TFGDGTFGALGHGNRENVAYPKEVES-LSGFRTMKVACGVWHSAAIVETTSQTGVNMVSR 442

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           K+ TWG G  +            +LGHG+    + PT+V    +    QV+CG++ T AL
Sbjct: 443 KLFTWGDGDKN------------RLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIAL 490



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 96/199 (48%), Gaps = 19/199 (9%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  + G  H A     G V+ +G+    ++         RP L+  L 
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLA 304

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESPV 343
            S  E + CG +HTC +T+ G+LY WG  S   G LG G I   H  P+RV GP     V
Sbjct: 305 VSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHG-IGASHWLPKRVSGPLEGLQV 363

Query: 344 DQVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
             V+CG W    A+S GK+ T+G     GTF        G LGHGN  +  +P  V    
Sbjct: 364 LSVACGSWHSALAMSSGKVFTFG----DGTF--------GALGHGNRENVAYPKEVESLS 411

Query: 403 NVKALQVSCGFNHTGALLE 421
             + ++V+CG  H+ A++E
Sbjct: 412 GFRTMKVACGVWHSAAIVE 430


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 167/345 (48%), Gaps = 47/345 (13%)

Query: 85  FLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGEL 144
            + ++G V+      FG+   +ENI     P +        + +S G  HS+ +T + +L
Sbjct: 7   LVPDSGAVFT-----FGKTKFAENI-----PSKFWFKSDTPICLSCGDEHSAIVTGNNKL 56

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAG 204
           YM+G N+ GQLGLG KAA  +  PT ++ L     K AA G   ++  T GG V + G  
Sbjct: 57  YMFGSNNWGQLGLGSKAA--VNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGN 114

Query: 205 GSGRLGHGQESS-----ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
             G+LG G         ++ F   TS++           K+K  +AG   SA + E+G++
Sbjct: 115 NEGQLGLGDTDERDTFHLISFF--TSQH-----------KIKQLSAGSNTSAALTEDGQL 161

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +++GD +  ++  ++  +   P  ++       + CG YH+  +T  GELYT+G +E+G 
Sbjct: 162 FMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGK 221

Query: 320 LGIGSIDVLHSPERVQGPFSESP--VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDG 377
           LG+ S   L +  R+    S  P  V QV+CG  HT  ++E  +  +G G          
Sbjct: 222 LGLPS--QLLTNHRIPQLVSSIPDKVIQVACGGGHTLVLTEESVYAFGLG---------- 269

Query: 378 HSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
               GQLG G  + +   P ++ + +  K + +SCG NHT  + +
Sbjct: 270 --QFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITD 312



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 31/293 (10%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           ++G+ ++G+LGLGS  +  +P    A +   +K  ACG  HT+  TE G VYATG N+ G
Sbjct: 58  MFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTIISTEGGNVYATGGNNEG 117

Query: 102 QLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           QLG+    E   + L     S  K  + Q+S G + S+A+T DG+L+MWG NS GQ+GL 
Sbjct: 118 QLGLGDTDERDTFHLISFFTSQHK--IKQLSAGSNTSAALTEDGQLFMWGDNSEGQIGL- 174

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            K    + +P +V    G      + G+  S  VT  G++ ++G   SG+L  G  S +L
Sbjct: 175 -KDVTNVCVPHQVTI--GKPISWISCGYYHSAFVTIDGELYTFGESESGKL--GLPSQLL 229

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI-----FGDRAVDKMLFQ 273
                T+   P+L+  +    +++A  G  H+  + E   VY      FG   +   +F+
Sbjct: 230 -----TNHRIPQLVSSIPDKVIQVACGGG-HTLVLTEES-VYAFGLGQFGQLGLGTFIFE 282

Query: 274 EGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIG 323
                  P ++  +   E+++   CG  HT ++T  G +YT+G   +G LG+G
Sbjct: 283 ----TSEPKVLEYV-KGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLG 330



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 95/315 (30%), Positives = 144/315 (45%), Gaps = 32/315 (10%)

Query: 68  FEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ 127
           F+  +   L+CG  H+  +T    +Y  G N++GQLG+      + +P  I  LK E V+
Sbjct: 32  FKSDTPICLSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVN-KPTCIKALKPEKVK 90

Query: 128 IST-GYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQ 181
            +  G  H+   T  G +Y  G N+ GQLGLG    +          L   FT     KQ
Sbjct: 91  FAACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDER------DTFHLISFFTSQHKIKQ 144

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            + G   S A+T  G++  WG    G++G    +++    + T            G  + 
Sbjct: 145 LSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTI-----------GKPIS 193

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---GNHARRPSLISKLPYSE-EVVCGG 297
             + G+ HSA +  +G +Y FG+    K+        NH R P L+S +P    +V CGG
Sbjct: 194 WISCGYYHSAFVTIDGELYTFGESESGKLGLPSQLLTNH-RIPQLVSSIPDKVIQVACGG 252

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
            HT VLT    +Y +G  + G LG+G+     S  +V        +  +SCG  HTA I+
Sbjct: 253 GHTLVLTEES-VYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMIT 311

Query: 358 E-GKILTWGWGGSHG 371
           + G I T+G  G HG
Sbjct: 312 DTGGIYTFG-DGRHG 325



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 14/71 (19%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           +G+G +G+LGLG  +  +R+ P  CS F K  ++ +ACGG H L       V+AT     
Sbjct: 319 FGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHML-------VFAT----- 366

Query: 101 GQLGISENIGY 111
            Q G++E + +
Sbjct: 367 PQAGMAEELEF 377


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 125/301 (41%), Gaps = 19/301 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG GS  S   PV  S        A+A G  H+L LT  G + A G N FGQ
Sbjct: 111 WGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTFGQ 170

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKK 160
           LG       S  P+ +S      V  I+ G  H+  +T  G  L  WGKN+ GQLG G  
Sbjct: 171 LGDGSTTDRS-TPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGTT 229

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
             +  P+   V    G+     A G + S+ +T     L+WG    G+LG+G        
Sbjct: 230 TGRDTPV--AVTLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGT------- 280

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
             +T    P  +    G +    AAG LHSA +   G  + +G     ++       +  
Sbjct: 281 --TTDSLVPIAVALPTGTEATAIAAGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSE 338

Query: 281 PSLISKLPYSEEVVC----GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
           P  +S LP    +         H   +TS G    WG+N NG LG GS     +P  V  
Sbjct: 339 PVAVS-LPADTRLTAIAGRDSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSL 397

Query: 337 P 337
           P
Sbjct: 398 P 398



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 165/426 (38%), Gaps = 50/426 (11%)

Query: 12  YYLKQDIKLGSKLGICKRWISSTLQRRFAAL---------WGNGDYGRLGLGSLESRWRP 62
           + L   + L   +G    W     Q R AA          WG  D G+LG G++     P
Sbjct: 23  FILALAVTLAQSIGASPGWA----QHRSAATAVVSDTILAWGENDGGQLGNGTMIDSSEP 78

Query: 63  VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GL 121
           V  S     ++ A+A G  H L LT  G V A G N  GQLG       S  P+ +S   
Sbjct: 79  VAVSLPAGTAVAAVAVGDRHGLALTSAGTVLAWGRNIEGQLGNGSTTSSS-TPVAVSLPT 137

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
               V ++ G  HS A+T  G +  WG N+ GQLG G    +  P+   V   +G     
Sbjct: 138 GTRAVAVAAGADHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPV--AVSLPAGTTVAA 195

Query: 182 AALGFEQSVAVTGGGK-VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKV 240
            A G + ++ +T  G  +L+WG    G+LG G          +T   TP  +    GV V
Sbjct: 196 IAAGRDHNLVLTSTGPTLLTWGKNTRGQLGDGT---------TTGRDTPVAVTLPPGVTV 246

Query: 241 KIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS---KLPYSEE---VV 294
              A G  HS  +  +     +G  +      Q GN     SL+     LP   E   + 
Sbjct: 247 TSVAGGRDHSLVLTSDDTALAWGGNS----FGQLGNGTTTDSLVPIAVALPTGTEATAIA 302

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G  H+  LTS G  + WG N  G LG GS      P  V  P              H  
Sbjct: 303 AGRLHSAALTSEGAAFAWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNV 362

Query: 355 AI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            I S G  L W            G ++ G+LG G+  D   P  V+     +   ++ G 
Sbjct: 363 TITSAGAALAW------------GANANGELGDGSTTDRSTPVAVSLPAGTRVAAIAAGD 410

Query: 414 NHTGAL 419
           + + AL
Sbjct: 411 DQSMAL 416


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 142/321 (44%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDSQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L +P  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 118/225 (52%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K+VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
            +         ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 PV--------HIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V      + +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
           +VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 KVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + ++P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLNPVHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGMNYSNCLGTGDSQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P+ I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLNPVHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTSFSCTDDVF 333


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 133/273 (48%), Gaps = 21/273 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLG-NG 63

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V +++ G +HS  +T DGE++ WG N++GQ+G G  A ++I
Sbjct: 64  TTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLI 123

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
           P      CL        A G   S+AV   G+V  WG  G+G+LG G          S +
Sbjct: 124 PRRV-TGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGS---------SGN 173

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR----P 281
           + TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    P
Sbjct: 174 QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPAP 231

Query: 282 SLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
            ++ K    E   C   HT    T GG +Y WG
Sbjct: 232 VVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 264



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 123/274 (44%), Gaps = 17/274 (6%)

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQL 155
           N  G LG+ + +  ++EP R+  L  K++  +S G   H    T +GE++ WG N+  QL
Sbjct: 2   NCCGCLGLGD-VQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQL 60

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G     ++P       LS     + A G   S+ +T  G+V +WG   SG++G G  +
Sbjct: 61  GNGTTNHGLVPCHISTN-LSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTA 119

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           + L   R T     +++  +        A G + S  +   G VY++G     ++     
Sbjct: 120 NQLIPRRVTGCLQNKVVVNI--------ACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSS 171

Query: 276 NHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
            +   P  I+ L     + V CG  HT VLT  G++Y WG+N  G LG G+      P  
Sbjct: 172 GNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAP 231

Query: 334 VQGPFSESPVDQVSCGWKHTAAISE--GKILTWG 365
           V     +  ++  +C   HT+A     G +  WG
Sbjct: 232 VVVE-KDRIIEIAACHSAHTSAAKTQGGHVYMWG 264



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 218 LGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           LG ++ST E  PR ++ L G K+   + G   H       G V+ +G  A  ++     N
Sbjct: 9   LGDVQSTIE--PRRLESLNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTN 66

Query: 277 HARRPSLISKLPYSE---EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
           H   P  IS    ++   EV CG YH+ VLTS GE++ WG N +G +G GS      P R
Sbjct: 67  HGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRR 126

Query: 334 VQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
           V G      V  ++CG   + A ++ G++  WG+ G+            GQLG G+  + 
Sbjct: 127 VTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNGN------------GQLGLGSSGNQ 174

Query: 393 IHPTIVNFGENVKALQVSCGFNHTGALLE 421
             P  +   + ++  +V+CG+ HT  L +
Sbjct: 175 PTPCRIAALQGIRVQRVACGYAHTLVLTD 203



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 157 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 216

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 217 QLGTGNKSNQSY-PAPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 269

Query: 160 KAAKVIPIPTKVECLSGIF 178
             +  +P  T   C   +F
Sbjct: 270 --SVTLPHLTHFSCTDDVF 286


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVLTS-GGELYTWG 313
           P ++ K    E   C   HT    S GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 KELEGVKVKIA-AAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV ++ A G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 SAHTSAAKSQGGHVYMWG 335



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 4/162 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG  + G++G GS  ++  P  V    +   + ++ACG   ++ + +TG VY  G N  G
Sbjct: 176 WGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNG 235

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           QLG+  + G    P R++ L+   VQ ++ GY H+  +T +G++Y WG NS GQLG G K
Sbjct: 236 QLGLGSS-GNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWG 202
           + +  P P  VE    I    A      S A + GG V  WG
Sbjct: 295 SNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 82.0 bits (201), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  S  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMS--IACGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG+I  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A +  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFCCTDDVF 357


>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1271

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/403 (27%), Positives = 179/403 (44%), Gaps = 69/403 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPV----VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           WG+   G++G  S   R  PV      +A ++ +   +A G   +L +   G +YA G N
Sbjct: 228 WGDNSSGQVGDNSTTLRQTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNN 287

Query: 99  DFGQL--GISENIGYSLEPLRI---SGLKKEV--VQISTGYHHSSAITVDGELYMWGKNS 151
             GQL  G +EN    L P+++   +G+  E    Q+S  + H+ A+  +  LY WG N 
Sbjct: 288 TRGQLGDGTTEN---KLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNG 344

Query: 152 NGQLGL------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGG 205
            GQLG           A     P  V   +G+   Q + G   S+A+    ++ +WG   
Sbjct: 345 YGQLGNTSVPTGSDNPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNT 404

Query: 206 SGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDR 265
           SGRLG G +            +TP  +++  GV     +AG      I  NG +Y +G  
Sbjct: 405 SGRLGDGTD---------IQRFTPVPVRQPAGVTFSQFSAGDTSCFAISTNGDLYAWGWN 455

Query: 266 AVDKMLFQEGNHA---RRPSLISKLPYSE------EVVCGGYHTCVLTSGGELYTWGSNE 316
              ++   +G++A   R P+LIS    +        V+    H   + S G LY+WG NE
Sbjct: 456 GYGRL--GDGSNAEDRRTPTLISPPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNE 513

Query: 317 NGCLGIGSIDV----LHSPERVQGPFSESPVD----QVSCGWKHTAAI-SEGKILTWGWG 367
            G LGI  I+     +  P  V    S +       Q++ GW+ ++A+ S+G + TWGW 
Sbjct: 514 YGQLGIKDINTDGSYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWGW- 572

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
                      ++GGQLG         PT+    +N +A++++
Sbjct: 573 -----------NNGGQLG--------DPTVPIGTDNSQAMRLT 596



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 151/351 (43%), Gaps = 32/351 (9%)

Query: 43   WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
            WG   YG+LG G+   R  PV +      +    ++ G   +L L   G V+A GLN  G
Sbjct: 785  WGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSAGTGFSLALDGQGHVWAWGLNSSG 844

Query: 102  QLG---ISEN--IGYSLEPLRI---SGLKKE---VVQISTGYHHSSAITVDGELYMWGKN 150
            QLG   I+ N    YS  P+R+   SG+      +  IS G  H  A+   G  + WG N
Sbjct: 845  QLGSNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSN 904

Query: 151  SNGQLGLGKKAAKVIPI---PTKVECLSGIFT----KQAALGFEQSVAVTGGGKVLSWGA 203
              G+LG+         I   P +V    G  T     Q + G   S+A    G+   WG+
Sbjct: 905  EFGKLGVPASTVATTGITTRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGS 964

Query: 204  GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              +G LG+  + ++ G+  +  +  P       G       AG  HS  +D+ GR++ +G
Sbjct: 965  NQNGALGNTSDVALNGYTTTPVQAKPG-TNPSGGFNPAQIIAGSGHSLALDDLGRIWSWG 1023

Query: 264  DRAVDKMLFQEGNHARRPSLISKLPYSEEV--------VCGGYHTCVLTSGGELYTWGSN 315
              +  ++   +      PS+++ +P +           V G  ++  L   G ++ WG N
Sbjct: 1024 GNSNGELGLGDTTTRTAPSMVA-MPANVSTFTQLTGSRVSG--NSLALDQNGNIWGWGQN 1080

Query: 316  ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
             +G LG G    L+ P ++  P       +V  G  HT A+ S+G  L WG
Sbjct: 1081 SSGMLGTGGTGSLNRPTKMSNPSGIDHFVKVCAGTGHTLAVASDGSTLGWG 1131



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 144/343 (41%), Gaps = 59/343 (17%)

Query: 101  GQLGISENIG-------YSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
            GQ  IS N G        +L P    G++    Q+S G  HS A+  DG +Y WG N  G
Sbjct: 734  GQWTISPNQGPDSGQTKVTLVPPAARGIR--FSQVSAGDDHSLALGSDGNVYSWGANKYG 791

Query: 154  QLGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRL 209
            QLG G    ++ P+    PT V   + +    A  GF  S+A+ G G V +WG   SG+L
Sbjct: 792  QLGDGTATDRLTPVQIPKPTGVNRFTQV---SAGTGF--SLALDGQGHVWAWGLNSSGQL 846

Query: 210  GHGQESSILGFLRSTSEYTPRLIKELEGVKVKI-----AAAGFLHSACIDENGRVYIFGD 264
            G    ++I     S    +P  ++   G+          +AG  H   +D  GR + +G 
Sbjct: 847  G---SNAIATNGSSAYSSSPIRVQAPSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGS 903

Query: 265  RAVDKMLFQEGNHA-----RRPSLISKLPYSE-------EVVCGGYHTCVLTSGGELYTW 312
                K+       A      RP  ++  P  E       +V  GG H+    + G  + W
Sbjct: 904  NEFGKLGVPASTVATTGITTRPVQVAT-PQGETTGFHYAQVSAGGSHSLATDTQGRAWGW 962

Query: 313  GSNENGCLGIGSIDVL--HSPERVQGPFSESP-----VDQVSCGWKHTAAISE-GKILTW 364
            GSN+NG LG  S   L  ++   VQ     +P       Q+  G  H+ A+ + G+I  W
Sbjct: 963  GSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRI--W 1020

Query: 365  GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL 407
             WGG          +S G+LG G+      P++V    NV   
Sbjct: 1021 SWGG----------NSNGELGLGDTTTRTAPSMVAMPANVSTF 1053



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 135/316 (42%), Gaps = 48/316 (15%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT-K 170
           +L P    G+K    QI++G  HS A+  DG LY WG NS+GQ+G      +  P+ T K
Sbjct: 195 TLTPPATRGIK--FSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLRQTPVKTNK 252

Query: 171 VECLSGIFT-KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
               S  FT    A G   S+A+   G + +WG    G+LG G   + L         TP
Sbjct: 253 PANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKL---------TP 303

Query: 230 RLIKELEGVKVKIA----AAGFLHSACIDENGRVYIF--------GDRAVDKMLFQEGNH 277
             + +  GV  +      +A + H+  +  N  +Y +        G+ +V         +
Sbjct: 304 VKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSDNPAAY 363

Query: 278 ARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQ 335
           + +P L+S        ++  G YH+  L S  +LY WG N +G LG G+     +P  V+
Sbjct: 364 SSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVR 423

Query: 336 GP----FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV- 390
            P    FS+      SC     A  + G +  WGW G             G+LG G++  
Sbjct: 424 QPAGVTFSQFSAGDTSC----FAISTNGDLYAWGWNGY------------GRLGDGSNAE 467

Query: 391 DYIHPTIVNFGENVKA 406
           D   PT+++  +   A
Sbjct: 468 DRRTPTLISPPDGASA 483



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 34/290 (11%)

Query: 72   SLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENI----GYSLEPLRISGLKKEVV- 126
            +L  ++ G  H L +   G  +  G N+FG+LG+  +     G +  P++++  + E   
Sbjct: 878  TLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQGETTG 937

Query: 127  ----QISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA----KVIPIPTK--VECLSG 176
                Q+S G  HS A    G  + WG N NG LG     A       P+  K       G
Sbjct: 938  FHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGG 997

Query: 177  IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES-----SILGFLRSTSEYTPRL 231
                Q   G   S+A+   G++ SWG   +G LG G  +     S++    + S +T   
Sbjct: 998  FNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFT--- 1054

Query: 232  IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LP 288
              +L G +V        +S  +D+NG ++ +G  +   +         RP+ +S    + 
Sbjct: 1055 --QLTGSRVS------GNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRPTKMSNPSGID 1106

Query: 289  YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPF 338
            +  +V  G  HT  + S G    WG N  G LG  + + ++SP  V  PF
Sbjct: 1107 HFVKVCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSPVSVLFPF 1156



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 157/391 (40%), Gaps = 56/391 (14%)

Query: 63   VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRI---S 119
            +V  A        ++ G  H+L L   G VY+ G N +GQLG        L P++I   +
Sbjct: 753  LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDR-LTPVQIPKPT 811

Query: 120  GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL------GKKAAKVIPIPTKVEC 173
            G+ +   Q+S G   S A+   G ++ WG NS+GQLG       G  A    PI  +V+ 
Sbjct: 812  GVNR-FTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPI--RVQA 868

Query: 174  LSGIFTKQAAL-----GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             SG+      L     G    +AV G G+   WG+   G+LG      +     +T+  T
Sbjct: 869  PSGMTATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLG------VPASTVATTGIT 922

Query: 229  PRLIK------ELEGVKVKIAAAGFLHSACIDENGRVYIFGD-------RAVDKML--FQ 273
             R ++      E  G      +AG  HS   D  GR + +G           D  L  + 
Sbjct: 923  TRPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYT 982

Query: 274  EGNHARRPSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
                  +P       ++  +++ G  H+  L   G +++WG N NG LG+G      +P 
Sbjct: 983  TTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPS 1042

Query: 333  RVQGPFSESPVDQVS---CGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
             V  P + S   Q++         A    G I  WGW          G +S G LG G  
Sbjct: 1043 MVAMPANVSTFTQLTGSRVSGNSLALDQNGNI--WGW----------GQNSSGMLGTGGT 1090

Query: 390  VDYIHPTIVNFGENVKA-LQVSCGFNHTGAL 419
                 PT ++    +   ++V  G  HT A+
Sbjct: 1091 GSLNRPTKMSNPSGIDHFVKVCAGTGHTLAV 1121


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G    +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 142/294 (48%), Gaps = 19/294 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  YG+LG G+  +R+ PV         + A+A GG H+L L   G V+A G N +GQ
Sbjct: 91  WGDNYYGQLGDGTTTNRYTPVQVQNLT--GVVAIAAGGGHSLALKSDGTVWAWGYNGYGQ 148

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    I     P+++  L   V   +    HS A+  DG ++ WG N  GQLG G    
Sbjct: 149 LG-DGTITNRTTPVQVKNLTGVVAVAAG-GGHSLALKSDGTVWAWGYNGYGQLGDGTTMN 206

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+  +V+ L+G+     A G   S+A+   G V +WG  G G+LG G          
Sbjct: 207 RYTPV--QVQNLTGVV--AIAAGSSHSLALKSDGTVWAWGNNGYGQLGDG---------T 253

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+  TP  ++ L  V V IAA G  HS  +  +G V+ +G     ++      +   P 
Sbjct: 254 TTNRTTPVRVQGLTDV-VAIAA-GNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPV 311

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            +  L     +  GG H+  L S G ++ WG+N+ G LG G+    H+P +V G
Sbjct: 312 QVQNLTGVVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDGTRTDRHTPVQVSG 365



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 155/332 (46%), Gaps = 36/332 (10%)

Query: 75  ALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHH 134
           A+  G  ++L L   G V+A G N +GQLG          P+++  L   VV I+ G  H
Sbjct: 71  AVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTN-RYTPVQVQNLTG-VVAIAAGGGH 128

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+  DG ++ WG N  GQLG G    +  P+  +V+ L+       A G   S+A+  
Sbjct: 129 SLALKSDGTVWAWGYNGYGQLGDGTITNRTTPV--QVKNLT--GVVAVAAGGGHSLALKS 184

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V +WG  G G+LG G          + + YTP  ++ L GV V IAA G  HS  + 
Sbjct: 185 DGTVWAWGYNGYGQLGDG---------TTMNRYTPVQVQNLTGV-VAIAA-GSSHSLALK 233

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGS 314
            +G V+ +G+    ++      +   P  +  L     +  G  H+  L S G ++TWG 
Sbjct: 234 SDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQGLTDVVAIAAGNEHSLALKSDGTVWTWGW 293

Query: 315 NENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTF 373
           N +G LG G+    ++P +VQ   + + V  ++ G  H+ A+ S+G +  W W       
Sbjct: 294 NYSGQLGDGTTTNRYTPVQVQ---NLTGVVAIAAGGGHSLALKSDGTV--WAW------- 341

Query: 374 SEDGHSSGGQLGHGNDVDYIHPTIV---NFGE 402
              G++  G+LG G   D   P  V   N G+
Sbjct: 342 ---GNNDWGELGDGTRTDRHTPVQVSGLNLGQ 370



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 152/347 (43%), Gaps = 54/347 (15%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           +A GGA +L +   G V+A G                  P+ +  L   VV +  G  +S
Sbjct: 37  IAAGGARSLAIKSDGTVWAWGGT----------------PVPVQNLTG-VVAVEAGSFYS 79

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            A+  DG ++ WG N  GQLG G    +  P+  +V+ L+G+     A G   S+A+   
Sbjct: 80  LALKSDGTVWAWGDNYYGQLGDGTTTNRYTPV--QVQNLTGVV--AIAAGGGHSLALKSD 135

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V +WG  G G+LG G           T+  TP  +K L    V   AAG  HS  +  
Sbjct: 136 GTVWAWGYNGYGQLGDG---------TITNRTTPVQVKNL--TGVVAVAAGGGHSLALKS 184

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVVCGGYHTCVLTSGGELYTWG 313
           +G V+ +G     ++   +G    R  P  +  L     +  G  H+  L S G ++ WG
Sbjct: 185 DGTVWAWGYNGYGQL--GDGTTMNRYTPVQVQNLTGVVAIAAGSSHSLALKSDGTVWAWG 242

Query: 314 SNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGT 372
           +N  G LG G+     +P RVQG    + V  ++ G +H+ A+ S+G + TWGW  S   
Sbjct: 243 NNGYGQLGDGTTTNRTTPVRVQG---LTDVVAIAAGNEHSLALKSDGTVWTWGWNYS--- 296

Query: 373 FSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                    GQLG G   +   P  V     V A  ++ G  H+ AL
Sbjct: 297 ---------GQLGDGTTTNRYTPVQVQNLTGVVA--IAAGGGHSLAL 332



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 133/295 (45%), Gaps = 48/295 (16%)

Query: 126 VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           V+I+ G   S AI  DG ++ WG                 P+P  V+ L+G+   +A  G
Sbjct: 35  VKIAAGGARSLAIKSDGTVWAWGGT---------------PVP--VQNLTGVVAVEA--G 75

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S+A+   G V +WG    G+LG G          +T+ YTP  ++ L GV V IAA 
Sbjct: 76  SFYSLALKSDGTVWAWGDNYYGQLGDG---------TTTNRYTPVQVQNLTGV-VAIAAG 125

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTS 305
           G  HS  +  +G V+ +G     ++      +   P  +  L     V  GG H+  L S
Sbjct: 126 GG-HSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAVAAGGGHSLALKS 184

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTW 364
            G ++ WG N  G LG G+    ++P +VQ   + + V  ++ G  H+ A+ S+G +  W
Sbjct: 185 DGTVWAWGYNGYGQLGDGTTMNRYTPVQVQ---NLTGVVAIAAGSSHSLALKSDGTV--W 239

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
            WG        +G+   GQLG G   +   P  V    +V A  ++ G  H+ AL
Sbjct: 240 AWG-------NNGY---GQLGDGTTTNRTTPVRVQGLTDVVA--IAAGNEHSLAL 282


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 44/311 (14%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG 185
           ++ G +H+ A+T+ G+LY WG  +   G LG G   +  +P       L GI     + G
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP-LEGIHVSSISCG 298

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              +  VT  G++ ++G G  G LGHG   SI           PR ++ L+G++   AA 
Sbjct: 299 PWHTALVTSAGQLFTFGDGSFGVLGHGDRESI---------SVPREVESLKGLRTVRAAC 349

Query: 246 GFLHSACIDE------------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL--PY 289
           G  H+A + E            +G+++ +GD   DK     G+   +  P+ ++ L  P 
Sbjct: 350 GVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDG--DKGRLGHGDKEPKLVPTCVAALVEPN 407

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
             +V CG   T  LT+ G +YT GS   G LG    D +  P RV+G   ++ V+++SCG
Sbjct: 408 FCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGM-LPVRVEGKLYKNFVEEISCG 466

Query: 350 WKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
             H A + S  ++ TWG G +            G+LGHG+  D   PT+V   ++ +   
Sbjct: 467 AYHVAVLTSRTEVYTWGKGAN------------GRLGHGDTEDKNTPTLVEALKDKQVRN 514

Query: 409 VSCGFNHTGAL 419
           V CG N T A+
Sbjct: 515 VVCGINFTAAI 525



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 141/308 (45%), Gaps = 31/308 (10%)

Query: 67  AFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK- 123
           A    +++ +ACG  HT  +T +G +Y    G   FG LG   ++ + + P  ++G  + 
Sbjct: 231 ALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWV-PKHVNGPLEG 289

Query: 124 -EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQA 182
             V  IS G  H++ +T  G+L+ +G  S G LG G + +  I +P +VE L G+ T +A
Sbjct: 290 IHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRES--ISVPREVESLKGLRTVRA 347

Query: 183 ALGFEQSVAVT------------GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
           A G   + AV               GK+ +WG G  GRLGHG +   L          P 
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKL---------VPT 398

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL--P 288
            +  L        A G   +  +  +G VY  G     ++   + +      +  KL   
Sbjct: 399 CVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKN 458

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
           + EE+ CG YH  VLTS  E+YTWG   NG LG G  +  ++P  V+    +  V  V C
Sbjct: 459 FVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEA-LKDKQVRNVVC 517

Query: 349 GWKHTAAI 356
           G   TAAI
Sbjct: 518 GINFTAAI 525



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD GRLG G  E +  P   +A  + +   +ACG   T+ LT +G VY  G   +GQ
Sbjct: 378 WGDGDKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQ 437

Query: 103 LGISENIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG ++  G  + P+R+ G   K  V +IS G +H + +T   E+Y WGK +NG+LG G  
Sbjct: 438 LGNAQADG--MLPVRVEGKLYKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 495

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
             K    PT VE L     +    G   + A+
Sbjct: 496 EDKN--TPTLVEALKDKQVRNVVCGINFTAAI 525



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 81/159 (50%), Gaps = 23/159 (14%)

Query: 275 GNHA----RRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSID 326
           G HA    ++  LI  L +   E V CG YHTC +T  G+LYTWG    + G LG G+ D
Sbjct: 216 GRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGN-D 274

Query: 327 VLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQL 384
           V H  P+ V GP     V  +SCG  HTA + S G++ T+G G            S G L
Sbjct: 275 VSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFGDG------------SFGVL 322

Query: 385 GHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
           GHG+      P  V   + ++ ++ +CG  HT A++E +
Sbjct: 323 GHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVM 361



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 31/208 (14%)

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS-- 285
           +LI  L  + +++ A G  H+  +  +G +Y +GD      L   GN      P  ++  
Sbjct: 227 KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGP 286

Query: 286 -KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            +  +   + CG +HT ++TS G+L+T+G    G LG G  + +  P  V+       V 
Sbjct: 287 LEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV- 345

Query: 345 QVSCGWKHTAAISE-------------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           + +CG  HTAA+ E             GKI TWG G              G+LGHG+   
Sbjct: 346 RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDK------------GRLGHGDKEP 393

Query: 392 YIHPTIVNFGENVKALQVSCGFNHTGAL 419
            + PT V         QV+CG   T AL
Sbjct: 394 KLVPTCVAALVEPNFCQVACGHCLTVAL 421


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     +V CG YHT   + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 22/302 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP++ +  L  ++V  S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
           +T+G N +G LG         P+ V+    +  V QV CG  HT A   + G+++++G G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHG 315

Query: 368 GS 369
            S
Sbjct: 316 PS 317



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 37/305 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGAEHTA 249

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++ +GK+ T+G          D  S  GQLG+    +   P +V   + + + QV CG 
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGS 296

Query: 414 NHTGA 418
            HT A
Sbjct: 297 YHTLA 301



 Score = 84.7 bits (208), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  ++    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG + ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 160/324 (49%), Gaps = 31/324 (9%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI      G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 18  SKFWFKNDIPAFLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSTVNKPTCVKALK 75

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISE-NIGYSLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  TE G VYA+G N+ GQLG+ + +   S   +     ++++ Q+
Sbjct: 76  PEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQL 135

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DGEL+MWG NS GQ+GL  K    + +P +V    G      + G+  
Sbjct: 136 SAGSNTSAALTEDGELFMWGDNSEGQIGL--KNITNVCVPQQVTV--GKPISWISCGYYH 191

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKI--AAAG 246
           S  VT  G++ ++G   SG+LG  ++  +            R+ + + G+  K+   A G
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLV----------NHRMPQSVPGIPEKVVQVACG 241

Query: 247 FLHSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYH 299
             H+  + E   VY      FG   +   LF+       P +I  +   +   + CG  H
Sbjct: 242 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFE----TPVPKVIEHIKDLKISSIFCGENH 296

Query: 300 TCVLTSGGELYTWGSNENGCLGIG 323
           T ++T  G +YT+G   +G LG+G
Sbjct: 297 TALITDLGLMYTFGDGRHGKLGLG 320



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 97/325 (29%), Positives = 156/325 (48%), Gaps = 32/325 (9%)

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG+   +ENI     P +          +S G  H++ +T + +LYM+G N+ GQLGLG 
Sbjct: 7   FGKTKFAENI-----PSKFWFKNDIPAFLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGS 61

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K+   +  PT V+ L     K AA G   ++  T GGKV + G    G+LG G       
Sbjct: 62  KS--TVNKPTCVKALKPEKVKFAACGRNHTLVSTEGGKVYASGGNNEGQLGLGDTDERNS 119

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHAR 279
           F   +   + R IK+L        +AG   SA + E+G ++++GD +  ++  +   +  
Sbjct: 120 FHLISFFTSQRKIKQL--------SAGSNTSAALTEDGELFMWGDNSEGQIGLKNITNVC 171

Query: 280 RPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI-GSIDVLHS-PERVQGP 337
            P  ++       + CG YH+  +T+ GELYT+G  E+G LG+   + V H  P+ V G 
Sbjct: 172 VPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPKQLLVNHRMPQSVPG- 230

Query: 338 FSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPT 396
                V QV+CG  HT  ++E  + T+G G              GQLG G  + +   P 
Sbjct: 231 -IPEKVVQVACGGGHTVVLTEKAVYTFGLG------------QFGQLGLGTFLFETPVPK 277

Query: 397 IVNFGENVKALQVSCGFNHTGALLE 421
           ++   +++K   + CG NHT  + +
Sbjct: 278 VIEHIKDLKISSIFCGENHTALITD 302



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 159/353 (45%), Gaps = 43/353 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      + +P  +  LK E V+ +  G +H
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVN-KPTCVKALKPEKVKFAACGRNH 88

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G++Y  G N+ GQLGLG    +          L   FT     KQ + G   S
Sbjct: 89  TLVSTEGGKVYASGGNNEGQLGLGDTDER------NSFHLISFFTSQRKIKQLSAGSNTS 142

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  G++  WG    G++G    +++           P+ +    G  +   + G+ H
Sbjct: 143 AALTEDGELFMWGDNSEGQIGLKNITNVC---------VPQQV--TVGKPISWISCGYYH 191

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYS-EEVVCGGYHTCVLTS 305
           SA +   G +Y FG+    K+   +    NH R P  +  +P    +V CGG HT VLT 
Sbjct: 192 SAFVTTEGELYTFGEPESGKLGLPKQLLVNH-RMPQSVPGIPEKVVQVACGGGHTVVLTE 250

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +YT+G  + G LG+G+        +V     +  +  + CG  HTA I++ G + T+
Sbjct: 251 KA-VYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALITDLGLMYTF 309

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV-NFGENVKALQVSCGFNHT 416
           G  G HG            LG  N  +   PT+  NF   +  L V+CG  HT
Sbjct: 310 G-DGRHGKLG---------LGLENFTNQFTPTLCSNFLRFIVQL-VACGGCHT 351


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P    A     +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G    +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T  + +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  ALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEALCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + V+P  T   C   +F
Sbjct: 317 -SVVLPHLTHFSCTDDVF 333


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRP-VVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P  +        +  +ACG  H+L LT+ G V+A G N+ G
Sbjct: 103 WGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCG 162

Query: 102 QLG--ISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G   + NI    + + + G K+ VV I+ G   S A+   GE+Y WG N NGQLGLG 
Sbjct: 163 QVGSGATANISTPRKVVSVLGGKR-VVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGN 221

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              +  P P KV  L+G+   QAA G+  S+A++  G + +WGA   G+LG G ++++ G
Sbjct: 222 NVNQ--PSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKANLCG 279

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
             +         I E  G  + IAA  + H SA + + G+VY++G
Sbjct: 280 AAK---------IGESIGRFIDIAATHYAHISAAMTQTGKVYMWG 315



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFG 101
           +GN     LGLG + S   P       K  + ALA G G H +  TE G +Y+ G N + 
Sbjct: 50  FGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIYSWGHNGYC 109

Query: 102 QLGISENIGYSLEPLRISGL--KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG +      L P RI+G     ++ QI+ G HHS  +T  GE++ WG N+ GQ+G G 
Sbjct: 110 QLG-NGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGA 168

Query: 160 KAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            A   I  P K V  L G      A G   S+AV   G+V  WG  G+G+LG G      
Sbjct: 169 TAN--ISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLG------ 220

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
               + ++ +P  +  L G+ +  AA G+ HS  + + G +Y +G
Sbjct: 221 ---NNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWG 262



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 129/285 (45%), Gaps = 33/285 (11%)

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           + L +SG+K   V  S G + +  +T D E++ +G N N  LGLG   + + P   +  C
Sbjct: 18  DDLVVSGVKLACVFGSAG-NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLC 76

Query: 174 LSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR 230
             G+F    AL F      VA T  G++ SWG  G  +LG+G  +   G L        R
Sbjct: 77  KKGMF----ALAFGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQ--GLLPH------R 124

Query: 231 LIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS 290
           +   L   K+   A G  HS  + + G V+ +G     ++      +   P  +  +   
Sbjct: 125 ITGNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGG 184

Query: 291 EEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
           + VV   CG   +  +   GE+Y WG N NG LG+G+     SP +V    +   + Q +
Sbjct: 185 KRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSS-LNGLIISQAA 243

Query: 348 CGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
           CG+ H+ A+S EG I TW            G +S GQLG GN  +
Sbjct: 244 CGYAHSMALSDEGNIYTW------------GANSYGQLGTGNKAN 276



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 23/301 (7%)

Query: 76  LAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL-KKEVVQIST 130
           LAC     G   +++T+   V+A G N    LG+ + +  SL P +I GL KK +  ++ 
Sbjct: 27  LACVFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGD-VMSSLTPRKIEGLCKKGMFALAF 85

Query: 131 GY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQS 189
           G   H  A T +GE+Y WG N   QLG G     ++P       L      Q A G   S
Sbjct: 86  GSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGN-LGSCKISQIACGSHHS 144

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPR-LIKELEGVKVKIAAAGFL 248
           + +T  G+V +WG    G++G G  ++I          TPR ++  L G +V   A G  
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANI---------STPRKVVSVLGGKRVVSIACGQT 195

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSG 306
            S  + ++G VY +G     ++      +   P  +S L      +  CG  H+  L+  
Sbjct: 196 SSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDE 255

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKH-TAAISE-GKILTW 364
           G +YTWG+N  G LG G+   L    ++ G      +D  +  + H +AA+++ GK+  W
Sbjct: 256 GNIYTWGANSYGQLGTGNKANLCGAAKI-GESIGRFIDIAATHYAHISAAMTQTGKVYMW 314

Query: 365 G 365
           G
Sbjct: 315 G 315



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 30/240 (12%)

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG 246
            +++ VT   +V ++G   +  LG G   S L         TPR I+ L   K  + A  
Sbjct: 36  NEAIYVTKDDEVFAFGNNHNACLGLGDVMSSL---------TPRKIEGL--CKKGMFALA 84

Query: 247 F---LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS---EEVVCGGYHT 300
           F    H     ENG +Y +G     ++     N    P  I+    S    ++ CG +H+
Sbjct: 85  FGSGPHVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHS 144

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEG 359
            VLT  GE++ WG N  G +G G+   + +P +V        V  ++CG   + A +  G
Sbjct: 145 LVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSG 204

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++  WG+ G+            GQLG GN+V+   P  V+    +   Q +CG+ H+ AL
Sbjct: 205 EVYGWGYNGN------------GQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMAL 252



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   S+     +   ACG AH++ L++ G +Y  G N +GQ
Sbjct: 209 WGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQ 268

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHH-SSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG                + + +   +T Y H S+A+T  G++YMWG+   GQ       
Sbjct: 269 LGTGNKANLCGAAKIGESIGRFIDIAATHYAHISAAMTQTGKVYMWGQ-CRGQ------- 320

Query: 162 AKVIPIPTKVECLSGIF 178
           +   P+ T+  CL  +F
Sbjct: 321 SITSPMETRFTCLDDVF 337


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LHS C+++                                
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K V    T    +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRK-VCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 141/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LHS C+++                                
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 23/304 (7%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG ++S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 93  GCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 151

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 152 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 209

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G            
Sbjct: 210 PIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 260

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  I  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 261 NQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 318

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P ++ K    E   C   HT    T GG +Y WG      + +  +    S + V   F+
Sbjct: 319 PVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFA 378

Query: 340 ESPV 343
              V
Sbjct: 379 TPAV 382



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 140/318 (44%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + +  ++E
Sbjct: 47  KWPIFSLCSEEELQLVRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGD-VQSTIE 105

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 106 PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 165

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 166 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 215

Query: 233 KE-LEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   A G + S  + + G VY++G     ++    G +   P  I+ L    
Sbjct: 216 TGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIR 275

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 276 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVIVE-KDRIIEIAACH 334

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 335 SAHTSAAKTQGGHVYMWG 352



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 130/302 (43%), Gaps = 43/302 (14%)

Query: 142 GELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLS----GIFT----------KQAAL--- 184
           G + M  K+  G+  + K    V   P+ ++ L      IF+          +QA +   
Sbjct: 11  GRVKMPEKDGGGEADMSKAVKPVRATPSSLKMLDVGKWPIFSLCSEEELQLVRQACVFGS 70

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
              + +  T   ++   G    G LG       LG ++ST E  PR +  L G K+   +
Sbjct: 71  AGNEVLYTTVNDEIFVLGTNCCGCLG-------LGDVQSTIE--PRRLDSLSGKKIACLS 121

Query: 245 AGF-LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE---EVVCGGYHT 300
            G   H       G V+ +G  A  ++     NH   P  IS    ++   EV CG YH+
Sbjct: 122 YGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHS 181

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-G 359
            VLTS GE++ WG N +G +G GS      P RV G      V  ++CG   + A+ + G
Sbjct: 182 LVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTG 241

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++  WG+ G+            GQLG G+  +   P  +   + ++  +V+CG+ HT  L
Sbjct: 242 EVYVWGYNGN------------GQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVL 289

Query: 420 LE 421
            +
Sbjct: 290 TD 291



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N  G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 79  TVNDEIFVLGTNCCGCLGLGDVQSTIEP--RRLDSLSG--KKIACLSYGSGPHVVLATTE 134

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 135 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 186

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 187 DGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVW 246

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P R+        V +V+CG+ HT  ++ EG++  WG      
Sbjct: 247 GYNGNGQLGLGSGGNQPTPCRI-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 299

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 300 ------ANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAACHSAHTSA 340



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 3/110 (2%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 245 VWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 304

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGK 149
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+
Sbjct: 305 QLGTGNKSNQSY-PTPVIVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ 353


>gi|418719204|ref|ZP_13278404.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. UI 09149]
 gi|421094338|ref|ZP_15555056.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200801926]
 gi|410362760|gb|EKP13795.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200801926]
 gi|410744357|gb|EKQ93098.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. UI 09149]
          Length = 506

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL  +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 487



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 154/364 (42%), Gaps = 43/364 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 247

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 248 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 300

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 301 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 360

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
            L S G +Y+WG N +G LGIG      SP     P     +   S  W    +  + + 
Sbjct: 361 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 417

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 416
            G++  WG          +G+++   +G  N +    P     G +NV  +   CG  H 
Sbjct: 418 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 466

Query: 417 GALL 420
            ALL
Sbjct: 467 FALL 470



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 147/341 (43%), Gaps = 28/341 (8%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ + + G VY  G N  GQ
Sbjct: 150 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 209

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 210 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 268

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 269 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 326

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  NGR+Y +G  A  ++
Sbjct: 327 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 379

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ I  +  +  V  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 380 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 439

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
            L   E  +       V    CG  H  A + +G+I  WGW
Sbjct: 440 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGW 480



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 119 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 233

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G    S 
Sbjct: 292 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 348

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           + Q++ G  H  A+ S G+I +WG   S
Sbjct: 349 IKQIANGRDHILALASNGRIYSWGLNAS 376



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       +  G   S +I  +GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 488


>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 168/380 (44%), Gaps = 65/380 (17%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN-DFG 101
           WG G  G+LG G  E R  P          +  L+    H L L        +G N D G
Sbjct: 64  WGRGSSGQLGGGIEEIRLYP--------SPVANLSVPNIHNLALAPGQLPSFSGDNQDSG 115

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
             G  E                  + IS G  HSS + V+G++++WGK   G+LG G + 
Sbjct: 116 DDGSFE------------------LGISCGLFHSS-LLVNGKVWIWGKGDGGRLGFGHEN 156

Query: 162 AKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              +P + +++E +  I     ALG   SVA+   G+V +WG GG G LGH         
Sbjct: 157 PVFVPTLNSRLESVRCI-----ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHR---- 207

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF-------Q 273
                E  PRL++     ++K  A    H+A I E+G VY +G    D  L         
Sbjct: 208 -----ELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPN 262

Query: 274 EGNHARRPSLISKLPYSEEVV-CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPE 332
           EG     P  +  LP     V CGG+ T  L   G+L+ WG+N N  LG G+      P+
Sbjct: 263 EGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPK 322

Query: 333 RVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVD 391
            V     ++P+ Q+ CG  H+  ++ +GK+L+WG+GG             GQLGH +  +
Sbjct: 323 PVPS-LEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGH------------GQLGHSSIQN 369

Query: 392 YIHPTIVNFGENVKALQVSC 411
              P +++   + + + ++C
Sbjct: 370 EKVPRVIDALADKRVIYIAC 389



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 125/271 (46%), Gaps = 20/271 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND--- 99
           WG G +G LG         P +     +  +K +A  GAHT  +TE+G VY  G ++   
Sbjct: 192 WGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTWGRDEGDG 251

Query: 100 ----FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQL 155
                   G +E  G S+ P R+  L   V  +S G   + A+ VDG+L+ WG N+N +L
Sbjct: 252 RLGLGPGRGPNEGGGLSI-PCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFEL 310

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQES 215
           G G       P P  V  L      Q   G   S+ +TG GKVLSWG GG G+LGH   S
Sbjct: 311 GRGNNIGGWEPKP--VPSLEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGH---S 365

Query: 216 SILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEG 275
           SI       +E  PR+I  L   +V   A     SA +   G++Y++G+ A D  L   G
Sbjct: 366 SI------QNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLYMWGN-AKDSQLGVPG 418

Query: 276 NHARRPSLISKLPYSEEVVCGGYHTCVLTSG 306
               + S +  +  +E+   G YH   +  G
Sbjct: 419 LPEVQTSPVEVIFLTEDDGLGPYHVLSVAVG 449



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 142/322 (44%), Gaps = 23/322 (7%)

Query: 23  KLGI-CKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA 81
           +LGI C  + SS L      +WG GD GRLG G     + P + S  E  S++ +A GG 
Sbjct: 121 ELGISCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGL 178

Query: 82  HTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISG-LKKEVVQISTGYHHSSAITV 140
           H++ L   G V+  G   FG LG S      L P  + G  +  +  I+T   H++AIT 
Sbjct: 179 HSVALNALGQVFTWGYGGFGALGHSV-YHRELVPRLVEGSWRGRIKHIATSGAHTAAITE 237

Query: 141 DGELYMWGKNSNGQLGLGKKAAKV-----IPIPTKVECLSGIFTKQAALGFEQSVAVTGG 195
            GE+Y WG++                   + IP +V  L       +  GF  ++A+   
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGF-FTMALGVD 296

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           GK+ +WGA  +  LG G          +   + P+ +  LE   +     G  HS  +  
Sbjct: 297 GKLWNWGANTNFELGRGN---------NIGGWEPKPVPSLEDTPIIQIVCGGYHSLVLTG 347

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWG 313
           +G+V  +G     ++      + + P +I  L       + C G  +  +T+ G+LY WG
Sbjct: 348 DGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLYMWG 407

Query: 314 SNENGCLGI-GSIDVLHSPERV 334
           + ++  LG+ G  +V  SP  V
Sbjct: 408 NAKDSQLGVPGLPEVQTSPVEV 429


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LG+G ++S   P    +     + +L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P  IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        + G   S+AV   G+V  WG  G+G+LG G          S 
Sbjct: 193 PIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------SG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G++Y +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ + I  ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGD-IQSTIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T DGE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGS---------TANQPIPRRV 198

Query: 233 K-ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
              L+   V   + G + S  + + G VY++G     ++      +   P  ++ L    
Sbjct: 199 TGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 SAHTSAAKTQGGHVYMWG 335



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       +G ++ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------VGDIQSTIE--PRRLDSLTGKKIASLSYGSGPHIV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
               +G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 113 LATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G GS      P RV G      V  +SCG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 40/291 (13%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LG+G   + + P   +++ L+G   K A+L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGVGDIQSTIEP--RRLDSLTG--KKIASLSYGSGPHIVLATTD 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L     ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRP-------SLISKLPYSEEVVCGGYHTCVLTSGGE 308
           +G V+ +G     ++    G+ A +P        L +K+  +  + CG   +  +   GE
Sbjct: 170 DGEVFAWGYNNSGQV--GSGSTANQPIPRRVTGCLQNKVVMN--ISCGQMCSMAVVDTGE 225

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWG 367
           +Y WG N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG+I  WG  
Sbjct: 226 VYVWGYNGNGQLGLGSSGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQIYAWG-- 282

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                      +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ----------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G +YA G N +G
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHHTHFCCTDDVF 357


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 178/379 (46%), Gaps = 40/379 (10%)

Query: 48  YGRLGLGSL--ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGI 105
           +G  GLG     +R  P V     +   K        +L + +TG V+      FG+   
Sbjct: 7   WGPRGLGQYLRPNRVAPAVFPKQVQIPFKVFGMAEPESL-VPDTGAVFT-----FGKTKF 60

Query: 106 SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
           +ENI     P +        + +S G  H++ +T + +LYM+G N+ GQLGLG K+A  I
Sbjct: 61  AENI-----PSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA--I 113

Query: 166 PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS 225
             PT ++ L     K AA G   ++  T  G V + G    G+LG G       F     
Sbjct: 114 SKPTCIKALKPEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTF-HQIG 172

Query: 226 EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLIS 285
            +TP+         +K  +AG   SA + E+G+++++GD +  ++  +  ++   P  ++
Sbjct: 173 FFTPK-------DNIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT 225

Query: 286 KLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH--SPERVQGPFSESPV 343
                  + CG YH+  +T  GELYT+G  ENG LG+ +  +++  SP+RV G   E  V
Sbjct: 226 VGKPISWISCGYYHSAFVTVDGELYTFGEPENGKLGLPNQLLINHRSPQRVLG-IPEK-V 283

Query: 344 DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGE 402
            QV+CG  HT  +++  +  +G G              GQLG G  + +   P ++   +
Sbjct: 284 IQVACGGGHTVVLTDKVVYAFGLG------------QFGQLGLGTFLFETSEPKVIERIK 331

Query: 403 NVKALQVSCGFNHTGALLE 421
           + K   +SCG NHT  + +
Sbjct: 332 DQKISYISCGENHTALMTD 350



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 27/322 (8%)

Query: 10  TKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFE 69
           +K++ K DI +    G     I +   + +  ++G+ ++G+LGLGS  +  +P    A +
Sbjct: 66  SKFWFKNDIPICLSCGDEHTAIVTGNNKLY--MFGSNNWGQLGLGSKSAISKPTCIKALK 123

Query: 70  KHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGY-SLEPLRISGLKKEVVQI 128
              +K  ACG  HTL  T+ G VYA G N+ GQLG+ +     +   +     K  + Q+
Sbjct: 124 PEKVKLAACGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNIKQL 183

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G + S+A+T DG+L+MWG NS GQ+GL  K+   IP     E   G      + G+  
Sbjct: 184 SAGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIP----HEVTVGKPISWISCGYYH 239

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S  VT  G++ ++G   +G+LG   +  I       +  +P+ +  +    +++A  G  
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLI-------NHRSPQRVLGIPEKVIQVACGGG- 291

Query: 249 HSACIDENGRVYI-----FGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTC 301
           H+  +  +  VY      FG   +   LF+       P +I ++   +   + CG  HT 
Sbjct: 292 HTVVL-TDKVVYAFGLGQFGQLGLGTFLFE----TSEPKVIERIKDQKISYISCGENHTA 346

Query: 302 VLTSGGELYTWGSNENGCLGIG 323
           ++T  G +YT+G   +G LG+G
Sbjct: 347 LMTDIGLMYTFGDGRHGKLGLG 368



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 154/348 (44%), Gaps = 41/348 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQIST-GYHH 134
           L+CG  HT  +T    +Y  G N++GQLG+      S +P  I  LK E V+++  G +H
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAIS-KPTCIKALKPEKVKLAACGRNH 136

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFT-----KQAALGFEQS 189
           +   T  G +Y  G N+ GQLGLG    +            G FT     KQ + G   S
Sbjct: 137 TLVSTDKGSVYAAGGNNEGQLGLGDTDDR------DTFHQIGFFTPKDNIKQLSAGANTS 190

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
            A+T  GK+  WG    G++G   +S++      T            G  +   + G+ H
Sbjct: 191 AALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTV-----------GKPISWISCGYYH 239

Query: 250 SACIDENGRVYIFGDRAVDKMLFQEG---NHARRPSLISKLPYSE-EVVCGGYHTCVLTS 305
           SA +  +G +Y FG+    K+        NH R P  +  +P    +V CGG HT VLT 
Sbjct: 240 SAFVTVDGELYTFGEPENGKLGLPNQLLINH-RSPQRVLGIPEKVIQVACGGGHTVVLTD 298

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTW 364
              +Y +G  + G LG+G+     S  +V     +  +  +SCG  HTA +++ G + T+
Sbjct: 299 KV-VYAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTF 357

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCG 412
           G  G HG            LG  N  +   PT+ +         ++CG
Sbjct: 358 G-DGRHGKLG---------LGMENFTNQFFPTLCSNFLRFTVQLIACG 395



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 45/252 (17%)

Query: 185 GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAA 244
           G E +  VTG  K+  +G+   G+LG G +S+I           P  IK L+  KVK+AA
Sbjct: 81  GDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAI---------SKPTCIKALKPEKVKLAA 131

Query: 245 AGFLHSACIDENGRVYI----------FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV 294
            G  H+    + G VY            GD        Q G    + ++       +++ 
Sbjct: 132 CGRNHTLVSTDKGSVYAAGGNNEGQLGLGDTDDRDTFHQIGFFTPKDNI-------KQLS 184

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA 354
            G   +  LT  G+L+ WG N  G +G+ +   +  P  V       P+  +SCG+ H+A
Sbjct: 185 AGANTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVT---VGKPISWISCGYYHSA 241

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGND--VDYIHPTIVNFGENVKALQVSC 411
            ++ +G++ T+G                G+LG  N   +++  P  V  G   K +QV+C
Sbjct: 242 FVTVDGELYTFG------------EPENGKLGLPNQLLINHRSPQRV-LGIPEKVIQVAC 288

Query: 412 GFNHTGALLEYV 423
           G  HT  L + V
Sbjct: 289 GGGHTVVLTDKV 300



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 2/46 (4%)

Query: 43  WGNGDYGRLGLG--SLESRWRPVVCSAFEKHSLKALACGGAHTLFL 86
           +G+G +G+LGLG  +  +++ P +CS F + +++ +ACGG H L  
Sbjct: 357 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCHMLVF 402


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 141/321 (43%), Gaps = 69/321 (21%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISENI 109
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG +   
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLG-NGTT 112

Query: 110 GYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPI 167
              + P+++    L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P 
Sbjct: 113 NQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PT 170

Query: 168 PTKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           P KV  CL        A G   S+AV   G+V  WG  G+G+LG G   + L        
Sbjct: 171 PRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL-------- 222

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK 286
            TP          V++AA   LHS C+++                               
Sbjct: 223 -TP----------VRVAA---LHSVCVNQ------------------------------- 237

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
                 +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  
Sbjct: 238 ------IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIA 290

Query: 347 SCGWKHTAAISE--GKILTWG 365
           +C   HT+A     G +  WG
Sbjct: 291 ACHSAHTSAAKTQGGHVYMWG 311



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      P+ VC+      +  +ACG  H++ L   G V+A G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P +++     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++ P+  +V  L  +   Q   G+  ++A+T  G + +WGA   G+LG G ++++L 
Sbjct: 218 NGNQLTPV--RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
                      ++ E E V V+IAA    H SA   + G VY++G
Sbjct: 276 --------PAHIMVEKERV-VEIAACHSAHTSAAKTQGGHVYMWG 311



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T + E++++G N +  LG G   + ++P   K+E
Sbjct: 13  LSPQEIASIRKACV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVP--KKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG +          + GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGAN----------TYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISK---LPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++     N    P  +     +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333


>gi|456888932|gb|EMF99869.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200701203]
          Length = 482

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 135/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +        + A   G  H L L   G V
Sbjct: 178 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMGAY--GFNHALILKSDGTV 235

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL  +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 236 VAFGQNNVGQLGNGANDLNADSFSMDPVAVVGLS-DVIQVIAGSEHSAALTENGEVYVWG 294

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A   +   P KVE LSGI  KQ A G +  +A+   G++ SWG   S
Sbjct: 295 RNQYGNLGNGRLSAANAIQSTPVKVEGLSGI--KQIANGRDHILALASNGRIYSWGLNAS 352

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L         AG   S  I +NG V  +G   
Sbjct: 353 GQLGIGGNGS--------PNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANG 404

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H   L   GE+Y WG N  G LG
Sbjct: 405 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLG 463



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 154/364 (42%), Gaps = 43/364 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 107 LSAGGAHSGFL-KNGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 165

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  ++       A GF
Sbjct: 166 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGINDAV--MGAYGF 223

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G        L + S    P  +  L  V   I  A
Sbjct: 224 NHALILKSDGTVVAFGQNNVGQLGNGAND-----LNADSFSMDPVAVVGLSDVIQVI--A 276

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +    L         P  +  L   +++  G  H  
Sbjct: 277 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEGLSGIKQIANGRDHIL 336

Query: 302 VLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGW----KHTAAIS 357
            L S G +Y+WG N +G LGIG      SP     P     +   S  W    +  + + 
Sbjct: 337 ALASNGRIYSWGLNASGQLGIGGNG---SPNPTPNPTQILNITNASSVWAGGTQSFSILK 393

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 416
            G++  WG          +G+++   +G  N +    P     G +NV  +   CG  H 
Sbjct: 394 NGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 442

Query: 417 GALL 420
            ALL
Sbjct: 443 FALL 446



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 147/341 (43%), Gaps = 28/341 (8%)

Query: 44  GNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           G  ++G+LG G S       V+       ++ ++     +++ + + G VY  G N  GQ
Sbjct: 126 GRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNNSMAIAKNGRVYTWGNNAKGQ 185

Query: 103 LGISEN---------IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNG 153
           LGI  N          G    P  + G+   V+  + G++H+  +  DG +  +G+N+ G
Sbjct: 186 LGIGNNNTNPANPRAAGNRQPPTLVPGINDAVMG-AYGFNHALILKSDGTVVAFGQNNVG 244

Query: 154 QLGLGKK---AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           QLG G     A      P  V  LS +   Q   G E S A+T  G+V  WG    G LG
Sbjct: 245 QLGNGANDLNADSFSMDPVAVVGLSDVI--QVIAGSEHSAALTENGEVYVWGRNQYGNLG 302

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM 270
           +G+ S+      +  + TP  ++ L G+K    A G  H   +  NGR+Y +G  A  ++
Sbjct: 303 NGRLSA-----ANAIQSTPVKVEGLSGIKQ--IANGRDHILALASNGRIYSWGLNASGQL 355

Query: 271 LFQ---EGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGC-LGIGSID 326
                   N    P+ I  +  +  V  GG  +  +   GE+  WG+N N   L IG  +
Sbjct: 356 GIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANLAIGETN 415

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGW 366
            L   E  +       V    CG  H  A + +G+I  WGW
Sbjct: 416 TLKVYEPNKAVVGIDNVIHFGCGATHNFALLGDGEIYGWGW 456



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 95  LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTVGRNNFGQLGTGNSTGDENNDVIVKLNSI 153

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+     P  +
Sbjct: 154 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 209

Query: 233 KELEGVKVKIAAA-GFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
             + G+   +  A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 210 --VPGINDAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANDLNADSFSMDPVAVVG 267

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID----VLHSPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +     +  +P +V+G    S 
Sbjct: 268 LSDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAIQSTPVKVEG---LSG 324

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           + Q++ G  H  A+ S G+I +WG   S
Sbjct: 325 IKQIANGRDHILALASNGRIYSWGLNAS 352



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 73/177 (41%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLES----RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L +    +  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 292 VWGRNQYGNLGNGRLSAANAIQSTPVKVEGLS--GIKQIANGRDHILALASNGRIYSWGL 349

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P     L       +  G   S +I  +GE+  WG N N   L
Sbjct: 350 NASGQLGIGGNGSPNPTPNPTQILNITNASSVWAGGTQSFSILKNGEVKGWGANGNTANL 409

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   + A+ G G++  WG    G LG 
Sbjct: 410 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFALLGDGEIYGWGWNFKGSLGR 464


>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Oryzias latipes]
          Length = 397

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 176/407 (43%), Gaps = 62/407 (15%)

Query: 43  WGNGDYGRLGLGSLESRWRPVV--CSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDF 100
           WG   YG+LG G  E +  P +   S  +   ++ +  GG HT  +TE G V+  G N  
Sbjct: 13  WGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQNHK 72

Query: 101 GQLGI---SENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGL 157
           GQLGI   ++   + + P+      + V  ++ G+  S  +T  G L   G N+ GQLG+
Sbjct: 73  GQLGIGHCADIATFQICPI----FNQRVTDVACGWDFSLLLTEGGRLLACGSNAFGQLGV 128

Query: 158 GKKAAKVI-PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           G+    +  P+  +V     I +   A G   S+AV   G V  W   G+G   H  +  
Sbjct: 129 GETVTHIADPLLVEVRFHEPIVS--VAAGLRHSLAVNDSGCVYQW---GNGLFSHVDDKE 183

Query: 217 ILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
           +    +  S+    L+K           AG  H  C+ E G ++++G    +++   E  
Sbjct: 184 MRTGDKCLSQKKSVLVK-----------AGSAHCVCLTEEGELFLWGSNKHEQLGTSESF 232

Query: 277 HARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPER 333
                 L   L   E+V     G  H    T  G ++TWG  + G LG  + D   +PE 
Sbjct: 233 LPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNSDS-QTPEE 291

Query: 334 VQGPF----SES-----PVD--------QVSCGWKHTAAISEGKILTWGWGGSHGTFSED 376
           +   F    S+S     P +        Q+SCG +H  A+   ++L+WGW          
Sbjct: 292 LLAGFITGTSQSRAVCCPAEVHVLRGATQISCGSEHNLAVVGDRLLSWGW---------- 341

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
             +  G  G+G   + +HP +++   N++A+ V CG  H+ A+   +
Sbjct: 342 --NEHGMCGNGFQTNVLHPGLIS---NLRAVLVGCGAGHSMAVCTRI 383



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 169/353 (47%), Gaps = 52/353 (14%)

Query: 91  CVYATGLNDFGQLGISENIGYSLEPL--RISG---LKKEVVQIST-GYHHSSAITVDGEL 144
           C++  G N +GQLG     G++ + L  R+SG   L+ +V+++   G  H++ IT  GE+
Sbjct: 9   CLHTWGANSYGQLG----QGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEV 64

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ---AALGFEQSVAVTGGGKVLSW 201
           ++ G+N  GQLG+G  A     I T   C   IF ++    A G++ S+ +T GG++L+ 
Sbjct: 65  FVCGQNHKGQLGIGHCA----DIATFQIC--PIFNQRVTDVACGWDFSLLLTEGGRLLAC 118

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G+   G+LG G+  + +          P L++      +   AAG  HS  ++++G VY 
Sbjct: 119 GSNAFGQLGVGETVTHIA--------DPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQ 170

Query: 262 FGD---RAVDKMLFQEGNH--ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNE 316
           +G+     VD    + G+   +++ S++ K         G  H   LT  GEL+ WGSN+
Sbjct: 171 WGNGLFSHVDDKEMRTGDKCLSQKKSVLVK--------AGSAHCVCLTEEGELFLWGSNK 222

Query: 317 NGCLGIGSIDVLHSPERVQGP-FSESPVDQVSCGWKHTAAISE-GKILTWGWG--GSHGT 372
           +  LG  S   L SP  ++    +   V  V  GW H  A +E G++ TWG G  G  G 
Sbjct: 223 HEQLGT-SESFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGR 281

Query: 373 FSEDGHS-----SGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
            + D  +     +G   G         P  V+      A Q+SCG  H  A++
Sbjct: 282 PNSDSQTPEELLAGFITGTSQSRAVCCPAEVHVLRG--ATQISCGSEHNLAVV 332


>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
          Length = 355

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 141/320 (44%), Gaps = 67/320 (20%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P          +K+L+ G G H L  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A+  DGE++ WG N+ GQ+G G  A +  P P
Sbjct: 114 QGIATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            KV  CL        A G   S+AV   G+V  WG  G+G+LG G   +         + 
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGN---------QL 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP          V++AA   LHS C+++                                
Sbjct: 223 TP----------VRVAA---LHSVCVNQ-------------------------------- 237

Query: 288 PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVS 347
                +VCG  HT  LT  G LY WG+N  G LG G+ + L SP  +     E  V+  +
Sbjct: 238 -----IVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAA 291

Query: 348 CGWKHTAAISE--GKILTWG 365
           C   HT+A     G +  WG
Sbjct: 292 CHSAHTSAAKTQGGHVYMWG 311



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 27/310 (8%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  I+ ++K  V   T    +  +T + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEIASIRKVCV-FGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTL--VPKKLE 69

Query: 173 CLSGIFTKQAALGFEQSVAV-TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRL 231
            L G   K  + G    V + T  G V +WG  G  +LG+G  +  +  ++     T  L
Sbjct: 70  GLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVC---TNLL 126

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE 291
           IK++  V     A G  HS  +  +G V+ +G     ++      +   P  ++   + +
Sbjct: 127 IKQVVEV-----ACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 292 EVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
            VV   CG   +  +   GE+Y WG N NG LG+G+     +P RV    S   V+Q+ C
Sbjct: 182 RVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVC-VNQIVC 240

Query: 349 GWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQ 408
           G+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +      
Sbjct: 241 GYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKNNLLSPAHIMVEKERVVEI 289

Query: 409 VSCGFNHTGA 418
            +C   HT A
Sbjct: 290 AACHSAHTSA 299



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  PV  +A     +  + CG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P  I   K+ VV+I+  +  H S+A T  G +YMWG+   GQ      
Sbjct: 265 LG-TGNKNNLLSPAHIMVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFSCTDDVF 333



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 104/239 (43%), Gaps = 26/239 (10%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ VT   +V  +G   S  LG G   S L          P+ ++ L G K+K  + G 
Sbjct: 33  EALYVTDNDEVFVFGLNYSNCLGTGDNQSTL---------VPKKLEGLCGKKIKSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVL 303
             H     E+G VY +G     ++      +G    +      +    EV CG +H+  L
Sbjct: 84  GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCTNLLIKQVVEVACGSHHSMAL 143

Query: 304 TSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKIL 362
            + GE++ WG N  G +G GS     +P +V        V  ++CG   + A+   G++ 
Sbjct: 144 AADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY 203

Query: 363 TWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
            WG+ G+            GQLG GN+ + + P  V    +V   Q+ CG+ HT AL +
Sbjct: 204 GWGYNGN------------GQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTD 250


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 10/273 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG         P    A E  ++  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I+ L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTCV-LTSGGELYTWG 313
           L+  +     +V CG YHT   + + G++ ++G
Sbjct: 281 LVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 22/302 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLR-ISGLKKEVVQISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP++ +  L  ++V  S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLV--SCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+GI   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-LKEISFTPKKITTLNGIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFP--------SQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPY--SEEVVCGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L       + CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI--SEGKILTWGWG 367
           +T+G N +G LG         P+ V+    +  V QV CG  HT A   + G+++++G G
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHG 315

Query: 368 GS 369
            S
Sbjct: 316 PS 317



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 37/305 (12%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A    +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L G+K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEI--------SFTPKKITTLNGIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG +HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGAEHTA 249

Query: 355 AIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGF 413
            ++ +GK+ T+G          D  S  GQLG+    +   P +V   + + + QV CG 
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLVEIIDGLVS-QVDCGS 296

Query: 414 NHTGA 418
            HT A
Sbjct: 297 YHTLA 301



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 20/233 (8%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G L E  + P   +      +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGELKEISFTPKKITTLNGIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G E +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
           +       G         P+L++ ++G+  ++    +   A +   G+V  FG
Sbjct: 270 YSPTPEKRG---------PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)

Query: 237 GVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY--SEEVV 294
           G ++  AA+G  HS  +  N RV   GD +  ++  +       P  I  L     + V 
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 295 CGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSESPVDQVSCGWKHT 353
           CG  H+  +   G ++ WG+   G LGIG + ++  +P+++    +   + QVSCG  H+
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT-LNGIKIIQVSCGHYHS 140

Query: 354 AAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIVNFGENVKALQVSC 411
            A+S + ++ +W            G +S GQLG G +      P  V   E +   QV+ 
Sbjct: 141 LALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAA 188

Query: 412 GFNHTGAL 419
           G  H+ AL
Sbjct: 189 GGAHSFAL 196


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 162/386 (41%), Gaps = 33/386 (8%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+    +LG G+  +R  PV        ++ A+A G  H+L +T  G V A G N  GQ
Sbjct: 65  WGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSSGQ 124

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG       S  P+ +       V  ++ G  HS A+T  G +  WG N  GQL  G   
Sbjct: 125 LGDGTTTPRS-TPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTT 183

Query: 162 AKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFL 221
                 P  V+  +G      A G   S+A+T  G VL+WGA  SG+LG G         
Sbjct: 184 TNSS-TPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGT-------- 234

Query: 222 RSTSEYTPRLIKELEG-VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
            +T   TP  +    G     IAA+   HS  +   G +  +G     ++   +G    R
Sbjct: 235 -TTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWGANFTGQL--GDGTITNR 291

Query: 281 PSLIS-KLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQG 336
            + ++  LP    V     G  H+  +TS G +  WG N +G LG GS     +P  V  
Sbjct: 292 STPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDL 351

Query: 337 PFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHP 395
           P   + V  V+ G  H+ A+ S G +L WG+  S            GQLG G   +   P
Sbjct: 352 PAGTT-VTAVAGGAGHSLALTSTGTMLAWGFNTS------------GQLGDGTTSNRSTP 398

Query: 396 TIVNFGENVKALQVSCGFNHTGALLE 421
              +   +     ++ G  H+ A++ 
Sbjct: 399 IATDLPADTTITAIAGGSFHSLAVVP 424



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 116/298 (38%), Gaps = 33/298 (11%)

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S+A    G    WG N+  QLG G    +  P+   V+  +       A G   S+AVT 
Sbjct: 53  SAAAGPPGTGLAWGDNAESQLGDGTTTNRSTPV--TVDLPADTTITAVAAGQGHSLAVTS 110

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G VL+WGA  SG+LG G          +T   TP  +    G  V   AAG  HS  + 
Sbjct: 111 AGTVLAWGANSSGQLGDGT---------TTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVT 161

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
             G V  +G     ++            ++  LP    V     G  H+  LTS G +  
Sbjct: 162 STGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLA 221

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSH 370
           WG+N +G LG G+     +P  V  P   +     +    H+ A+ S G +L WG     
Sbjct: 222 WGANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTSTGTMLAWG----- 276

Query: 371 GTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNH------TGALLEY 422
             F+       GQLG G   +   P  V+         V+ G  H      TG +L +
Sbjct: 277 ANFT-------GQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAW 327


>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
          Length = 390

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 171/377 (45%), Gaps = 51/377 (13%)

Query: 43  WGNGDYGRLGLGSLESR-WRPVVCS--AFEKHSLK--ALACGGAHTLFLTETGCVYATGL 97
           WG+G+ G+LG+G++E + W   VCS  A   H  +  ++  G  ++L + E G ++  G 
Sbjct: 10  WGSGEDGQLGVGNMEDKDW---VCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWGW 66

Query: 98  NDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           N  G LG          P ++  L+  ++VQ + G  H  A+   G+ Y WG N  GQ G
Sbjct: 67  NQRGTLGHPPESKTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGGNEYGQCG 126

Query: 157 L--------GKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
                     K   + I IP +  C   +  +Q A G   SV +T  G V +WG      
Sbjct: 127 EEPERKEDGSKVLRRDIAIPQR--CAPQLRVRQVAAGGTHSVVLTHNGHVWTWG------ 178

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
                +    G ++  S  TP  ++ LE   V++ A G  H+  + E G V+ +G+    
Sbjct: 179 -----QPWPPGDIKQIS--TPVRVQGLE--NVQLIAVGAFHNLALLEEGEVWAWGNNEYG 229

Query: 269 KMLFQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
           ++   +     +P  +  L      ++  GG+H+  LT+  E+Y WG  E+G LG G   
Sbjct: 230 QLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDK 289

Query: 327 VLHS-PERVQGPFSESPVDQVSCGWKHTAA-ISEGKILTWGWGGSHGTFSEDGHSSGGQL 384
                P++V     E+ + QVSCG  H+ A  ++G+I ++            G +  G+L
Sbjct: 290 SSKMVPQKVHLLAGET-IAQVSCGGTHSVARTADGRIFSY------------GRADHGRL 336

Query: 385 GHGNDVDYIHPTIVNFG 401
           G+G  V   HP  V  G
Sbjct: 337 GYGRKVTTGHPMEVPIG 353



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 143/333 (42%), Gaps = 25/333 (7%)

Query: 91  CVYATGLNDFGQLGIS--ENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            V A G  + GQLG+   E+  +      ++   K VV +  G  +S AI  DG+L+ WG
Sbjct: 6   AVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFTWG 65

Query: 149 KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGR 208
            N  G LG   ++ K    PT+V+ L  +   QAA+G    +AV   G+  +WG    G+
Sbjct: 66  WNQRGTLGHPPES-KTESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAYAWGGNEYGQ 124

Query: 209 LGHGQESSILG--FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
            G   E    G   LR       R   +L   +V+  AAG  HS  +  NG V+ +G   
Sbjct: 125 CGEEPERKEDGSKVLRRDIAIPQRCAPQL---RVRQVAAGGTHSVVLTHNGHVWTWGQPW 181

Query: 267 VDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSID 326
               + Q       P  +  L   + +  G +H   L   GE++ WG+NE G LG G   
Sbjct: 182 PPGDIKQ----ISTPVRVQGLENVQLIAVGAFHNLALLEEGEVWAWGNNEYGQLGTGDTQ 237

Query: 327 VLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGH 386
               P  VQG       D  + GW  TA  ++ ++  WG  G H           G+LG 
Sbjct: 238 PRSQPVPVQGLSGLILADIAAGGWHSTALTTDAEVYAWG-RGEH-----------GRLGF 285

Query: 387 GND-VDYIHPTIVNFGENVKALQVSCGFNHTGA 418
           G+D    + P  V+        QVSCG  H+ A
Sbjct: 286 GDDKSSKMVPQKVHLLAGETIAQVSCGGTHSVA 318



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 118/290 (40%), Gaps = 38/290 (13%)

Query: 141 DGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLS 200
           D  +  WG   +GQLG+G    K      +     G        G   S+A+   G++ +
Sbjct: 4   DHAVLAWGSGEDGQLGVGNMEDKDWVCSIQALASHGKRVVSVVAGSRNSLAICEDGQLFT 63

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG    G LGH  ES         +E TP  +K LE VK+  AA G  H   +D+ G+ Y
Sbjct: 64  WGWNQRGTLGHPPESK--------TESTPTQVKALENVKIVQAAIGGWHCLAVDDQGQAY 115

Query: 261 IFGDRAV-----DKMLFQEGNHARR-----PSLISKLPYSEEVVCGGYHTCVLTSGGELY 310
            +G         +    ++G+   R     P   +      +V  GG H+ VLT  G ++
Sbjct: 116 AWGGNEYGQCGEEPERKEDGSKVLRRDIAIPQRCAPQLRVRQVAAGGTHSVVLTHNGHVW 175

Query: 311 TWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEGKILTWGWGGS 369
           TWG         G I  + +P RVQG  +   V  ++ G  H  A + EG++  W     
Sbjct: 176 TWGQP----WPPGDIKQISTPVRVQGLEN---VQLIAVGAFHNLALLEEGEVWAW----- 223

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
                  G++  GQLG G+      P  V     +    ++ G  H+ AL
Sbjct: 224 -------GNNEYGQLGTGDTQPRSQPVPVQGLSGLILADIAAGGWHSTAL 266


>gi|261329865|emb|CBH12848.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 640

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 164/360 (45%), Gaps = 35/360 (9%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           ++R+    WG+G  G LG    E    P  V  + F  H +  +A G +++  L   G V
Sbjct: 152 MRRQLLFSWGSGSCGELGTQRFEDCNTPTFVQITPFGVHVVD-VALGASYSCVLASDGNV 210

Query: 93  YATGLNDFGQLGI----------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVD 141
           Y  G  D+GQLG+           +       P RIS  ++E  V ++ GY  + A+T D
Sbjct: 211 YTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALTAD 270

Query: 142 GELYMWGKNSNGQLGLGKK----AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
             +Y WG N++GQ GLG +    + + +  PT V  L G   +Q + G   ++A+   G 
Sbjct: 271 HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQLSCGSFFTLALGTDGT 330

Query: 198 VLSWGAGGSGRLGHGQES-------SILGFLRSTSEYT----PRLIKELEGVKVKIAAAG 246
           + SWG      LG+  E        SI+G   S  E T    P++++     K+    AG
Sbjct: 331 LYSWGLLDCLGLGNEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIHAG 390

Query: 247 FLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLP--YSEEVVCGGYHTCVL 303
             HS  I+  G ++ +G     ++   +     RP  ++  L   +  +V CG +HT  L
Sbjct: 391 QWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVAL 450

Query: 304 TSGGELYTWGSNENG-CLGIGSIDVLHSPERVQG-PFSESPVDQ-VSCGWKHTAAISEGK 360
           T  G +Y WG N +G C    + D + SP RV    F    V + ++CG +HT  + EG 
Sbjct: 451 TDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVMEGP 510



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 51/342 (14%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP 166
           ++I+     VV ++ G  +S  +  DG +Y +G    GQLGLG         +    V+ 
Sbjct: 182 VQITPFGVHVVDVALGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVT 241

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P ++           A G+  +VA+T    V  WG    G+ G G  S     LR   E
Sbjct: 242 VPQRISMFEREPAVHVAAGYAFAVALTADHHVYFWGNNNHGQSGLGPRSFHCS-LRKVEE 300

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRA-------V 267
             P L+  LEG  ++  + G   +  +  +G +Y +G             RA       +
Sbjct: 301 --PTLVTTLEGKHIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGNEAEVRASVTDISII 358

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            K L  E         + ++P   ++V    G +H+  + + GEL+TWG    G LG G 
Sbjct: 359 GKSLSAEERTVVLEPQVVRVPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGD 418

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
              +  P++V G  +   V  V+CG  HT A+++ G +  W            G ++ GQ
Sbjct: 419 NGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYCW------------GDNTSGQ 466

Query: 384 LGHGNDVDYIHPT--IVN--FGENVKALQVSCGFNHTGALLE 421
            G     D I     +VN  F     A  ++CG  HT  ++E
Sbjct: 467 CGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVME 508


>gi|156356052|ref|XP_001623745.1| predicted protein [Nematostella vectensis]
 gi|156210473|gb|EDO31645.1| predicted protein [Nematostella vectensis]
          Length = 383

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 176/413 (42%), Gaps = 75/413 (18%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLN 98
           F  L G   YG+L  G  +   +P V S + K  +  +  GG HT  +T++  +Y  G N
Sbjct: 3   FLNLKGANSYGQLACGHTDDVIKPAVHSNW-KDDVLCITGGGGHTAMITDSRELYTCGWN 61

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAIT--VDGELYMWGKNSNGQLG 156
           + GQLG+ + I   +E  R+  L   V  +S G++H+ AIT    G L ++G N+ GQLG
Sbjct: 62  NRGQLGLGDTIN-RIELHRV--LIPPVKHVSCGWNHTLAITGNYTGHLLVFGSNAFGQLG 118

Query: 157 LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESS 216
           +G+   +    PT  E   G      A G   SVAV             + + G     S
Sbjct: 119 IGRIGWQCT-TPTSCEVSPGSCVTDVAAGLRHSVAVL------------ATKYGVYFFES 165

Query: 217 ILGFLRSTSEYTPRLIK-------ELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDK 269
              FL + S Y   ++K         EG + K  A G  H+  + + G VY +G      
Sbjct: 166 YSQFLLNVSTYLSHILKYRLLFVVSFEGCRGKSIAVGLHHTVLLTDAGAVYCWGSN---- 221

Query: 270 MLFQEGNHARRPSLISKLPYS------------EEVVCGGYHTCVLTSGGELYTWGSNEN 317
              Q G      SL+  +P               E+  G  H  V T  G +YTWG  + 
Sbjct: 222 ---QHGQCG--ASLLQSVPVPMRVRGPLNDACVREIHSGWSHVVVATDQGRVYTWGRADY 276

Query: 318 GCLGIGSIDVLHSPERVQGPFSESP--------VDQVSCGWKHTAAIS-EGKILTWGWGG 368
           G LG G        E  Q   S  P        V Q++CG +H+ AIS +G++ TWGW  
Sbjct: 277 GQLGGGD-------ELQQNGHSAEPREVKCLRGVKQLACGAEHSIAISGDGQVRTWGW-- 327

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                     +  G  G G++ + + P +V+  +    + V CG  H+ A+++
Sbjct: 328 ----------NEHGMCGTGDESNVLSPVLVSAVQRSLVMLVGCGSGHSFAVVK 370



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 139/335 (41%), Gaps = 35/335 (10%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKH-----SLKALACGGAHTLFLT--ETGCVYAT 95
           W N   G+LGLG   +R         E H      +K ++CG  HTL +T   TG +   
Sbjct: 60  WNN--RGQLGLGDTINR--------IELHRVLIPPVKHVSCGWNHTLAITGNYTGHLLVF 109

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKKE--VVQISTGYHHSSAITVDGE-LYMWGKNSN 152
           G N FGQLGI   IG+         +     V  ++ G  HS A+      +Y +   S 
Sbjct: 110 GSNAFGQLGIGR-IGWQCTTPTSCEVSPGSCVTDVAAGLRHSVAVLATKYGVYFFESYSQ 168

Query: 153 GQLGLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
             L +    + ++      V    G   K  A+G   +V +T  G V  WG+   G+ G 
Sbjct: 169 FLLNVSTYLSHILKYRLLFVVSFEGCRGKSIAVGLHHTVLLTDAGAVYCWGSNQHGQCGA 228

Query: 212 GQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM- 270
               S+   +R         ++E+         +G+ H     + GRVY +G     ++ 
Sbjct: 229 SLLQSVPVPMRVRGPLNDACVREIH--------SGWSHVVVATDQGRVYTWGRADYGQLG 280

Query: 271 ---LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDV 327
                Q+  H+  P  +  L   +++ CG  H+  ++  G++ TWG NE+G  G G    
Sbjct: 281 GGDELQQNGHSAEPREVKCLRGVKQLACGAEHSIAISGDGQVRTWGWNEHGMCGTGDESN 340

Query: 328 LHSPERVQGPFSESPVDQVSCGWKHTAAISEGKIL 362
           + SP  V      S V  V CG  H+ A+ + +++
Sbjct: 341 VLSPVLVSA-VQRSLVMLVGCGSGHSFAVVKTRLM 374


>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
          Length = 531

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 132/271 (48%), Gaps = 21/271 (7%)

Query: 51  LGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGI-SEN 108
           LG G  +S   P    A     + +L+ G G H +  TE G VYA G N + QLG  + N
Sbjct: 54  LGTGDNQSTIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTN 113

Query: 109 IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIP 168
            G +   +  + L K+VV+++ G HHS A++ DG+LY WG N+ GQ+G G  A +  P P
Sbjct: 114 QGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTP 171

Query: 169 TKV-ECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEY 227
            +V  CL G      A G   S+AV   G+V  WG  G+G+LG G   + L         
Sbjct: 172 RRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQL--------- 222

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP  +  L GV +   A G+ H+  + + G +Y +G     ++    GN + + S +  +
Sbjct: 223 TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQL--GTGNKSNQLSPVQIM 280

Query: 288 PYSEEVV----CGGYHTCVL-TSGGELYTWG 313
              E VV    C   HT    T  G++Y WG
Sbjct: 281 MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 121/225 (53%), Gaps = 16/225 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPV-VCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           WG+  Y +LG G+      PV VC+      +  +ACG  H++ L+  G +YA G N+ G
Sbjct: 99  WGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCG 158

Query: 102 QLGISENIGYSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           Q+G S +      P R+S     K VV I+ G   S A+  +GE+Y WG N NGQLGLG 
Sbjct: 159 QVG-SGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGN 217

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
              ++   P +V  L G+   Q A G+  ++A+T  G + +WGA   G+LG G +S+ L 
Sbjct: 218 NGNQL--TPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLH-SACIDENGRVYIFG 263
            +        +++ E E V V+IAA    H SA   ++G+VY++G
Sbjct: 276 PV--------QIMMEKERV-VEIAACHSAHTSAAKTQSGQVYMWG 311



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 142/312 (45%), Gaps = 31/312 (9%)

Query: 113 LEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           L P  ++ ++K  V   T  + +  IT + E++++G N +  LG G   + +  +P K+E
Sbjct: 13  LSPQEVASIRKACV-FGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTI--VPKKLE 69

Query: 173 CLSGIFTKQAALGF---EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            L G   K ++L +      V  T  G+V +WG  G  +LG+G  +  +  ++     T 
Sbjct: 70  ALCG--KKISSLSYGSGPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVC---TN 124

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPY 289
            LIK     KV   A G  HS  +  +G +Y +G     ++      +   P  +S    
Sbjct: 125 LLIK-----KVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ 179

Query: 290 SEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQV 346
            + VV   CG   +  + S GE+Y WG N NG LG+G+     +P RV        + Q+
Sbjct: 180 GKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQLTPCRV-AALHGVCILQI 238

Query: 347 SCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKA 406
           +CG+ HT A+++  +L + WG           ++ GQLG GN  + + P  +   +    
Sbjct: 239 ACGYAHTLALTDEGLL-YAWGA----------NTYGQLGTGNKSNQLSPVQIMMEKERVV 287

Query: 407 LQVSCGFNHTGA 418
              +C   HT A
Sbjct: 288 EIAACHSAHTSA 299



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 107/242 (44%), Gaps = 32/242 (13%)

Query: 188 QSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF 247
           +++ +T   +V  +G   S  LG G   S +          P+ ++ L G K+   + G 
Sbjct: 33  EAIYITHNDEVFVFGLNCSNCLGTGDNQSTI---------VPKKLEALCGKKISSLSYGS 83

Query: 248 -LHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS------LISKLPYSEEVVCGGYHT 300
             H     E+G VY +G     ++     N    P       LI K+    EV CG +H+
Sbjct: 84  GPHVVLCTEDGEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVV---EVACGSHHS 140

Query: 301 CVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHT-AAISEG 359
             L+  G+LY WG N  G +G GS     +P RV        V  ++CG   + A +S G
Sbjct: 141 MALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNG 200

Query: 360 KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           ++  WG+ G+            GQLG GN+ + + P  V     V  LQ++CG+ HT AL
Sbjct: 201 EVYGWGYNGN------------GQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLAL 248

Query: 420 LE 421
            +
Sbjct: 249 TD 250



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LGLG+  ++  P   +A     +  +ACG AHTL LT+ G +YA G N +GQ
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQ 264

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGKK 160
           LG + N    L P++I   K+ VV+I+  +  H S+A T  G++YMWG+   GQ      
Sbjct: 265 LG-TGNKSNQLSPVQIMMEKERVVEIAACHSAHTSAAKTQSGQVYMWGQ-CRGQ------ 316

Query: 161 AAKVIPIPTKVECLSGIF 178
            + ++P  T   C   +F
Sbjct: 317 -SVILPHLTHFACTDDVF 333


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 150/339 (44%), Gaps = 46/339 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G      +P +  +    S+  +ACG  HT  +T  G ++    G ++ 
Sbjct: 304 WGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNA 363

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  +V  ++ G  H++ +T   +L+ +G  + G LG G
Sbjct: 364 GLLGHGTDVSHWI-PKRISGPLEGLQVASVTCGPWHTALVTTTRQLFTFGDGTFGVLGHG 422

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGF-----------EQSVAVTGGGKVLSWGAGGSG 207
            K    +  P +VE LSG+ T   A G             QS A    GK+ +WG G   
Sbjct: 423 DKDN--VAYPREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKN 480

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L     +  A G   +  +  +G+V   G    
Sbjct: 481 RLGHGDKEPRL---------KPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGS--- 528

Query: 268 DKMLFQEGNHARRPSLISKLPY----------SEEVVCGGYHTCVLTSGGELYTWGSNEN 317
             +  Q GN    P    KLP            EE+ CG YH  VLTS  E+YTWG   N
Sbjct: 529 -TVYGQLGN----PQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 318 GCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G LG G I+   +P  V+    +  V  ++CG  +TAAI
Sbjct: 584 GRLGHGDIEDRKTPTLVET-LKDRHVKYIACGSNYTAAI 621



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 45/363 (12%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYS-LEPLRISGLKKEVVQ-ISTGYH 133
           +ACG  H   +T  G ++  G    G+LG    +G   ++P  +  L    V  ++ G  
Sbjct: 285 IACGVRHAALVTRQGEIFTWGEESGGRLG--HGVGRDVIQPRLVESLAFTSVDFVACGEF 342

Query: 134 HSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSV 190
           H+ A+T+ GEL+ WG  ++  G LG G   +  IP   ++   L G+       G   + 
Sbjct: 343 HTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIP--KRISGPLEGLQVASVTCGPWHTA 400

Query: 191 AVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHS 250
            VT   ++ ++G G  G LGHG + ++           PR ++ L G++    A G  H+
Sbjct: 401 LVTTTRQLFTFGDGTFGVLGHGDKDNVA---------YPREVESLSGLRTIAVACGVWHT 451

Query: 251 ACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGG 297
           A + E           +G+++ +GD   +++   +     +P+ +  L  Y+ ++V CG 
Sbjct: 452 AAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGH 511

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G++ T GS   G LG    D    P  V+       V++++CG  H A + 
Sbjct: 512 SLTVGLTTSGQVCTMGSTVYGQLGNPQSDG-KLPCFVEDKLLGECVEEIACGAYHVAVLT 570

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT+V   ++     ++CG N+T
Sbjct: 571 SRNEVYTWGKGAN------------GRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYT 618

Query: 417 GAL 419
            A+
Sbjct: 619 AAI 621



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 22/202 (10%)

Query: 231 LIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           L K LE    + V   A G  H+A +   G ++ +G+ +  ++    G    +P L+  L
Sbjct: 270 LPKPLESNVVLDVHHIACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESL 329

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
            ++  + V CG +HTC +T  GEL+TWG  ++  G LG G+ DV H  P+R+ GP     
Sbjct: 330 AFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGT-DVSHWIPKRISGPLEGLQ 388

Query: 343 VDQVSCGWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  V+CG  HTA ++  + + T+G     GTF        G LGHG+  +  +P  V   
Sbjct: 389 VASVTCGPWHTALVTTTRQLFTFG----DGTF--------GVLGHGDKDNVAYPREVESL 436

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
             ++ + V+CG  HT A++E +
Sbjct: 437 SGLRTIAVACGVWHTAAVVEVI 458



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 127/309 (41%), Gaps = 59/309 (19%)

Query: 142 GELYMWG-------------KNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           G++Y+WG             KN+N    L  +A  ++P P +   +  +     A G   
Sbjct: 237 GDVYIWGEVICDNLVKVGADKNANY---LTTRADLLLPKPLESNVVLDVH--HIACGVRH 291

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  VT  G++ +WG    GRLGHG    ++          PRL++ L    V   A G  
Sbjct: 292 AALVTRQGEIFTWGEESGGRLGHGVGRDVI---------QPRLVESLAFTSVDFVACGEF 342

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYS----EEVVCGGYHTCV 302
           H+  +   G ++ +GD   +  L   G       P  IS  P        V CG +HT +
Sbjct: 343 HTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRISG-PLEGLQVASVTCGPWHTAL 401

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE---- 358
           +T+  +L+T+G    G LG G  D +  P  V+   S      V+CG  HTAA+ E    
Sbjct: 402 VTTTRQLFTFGDGTFGVLGHGDKDNVAYPREVES-LSGLRTIAVACGVWHTAAVVEVIVT 460

Query: 359 --------GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
                   GK+ TWG G  +            +LGHG+    + PT V         +V+
Sbjct: 461 QSSASVSSGKLFTWGDGDKN------------RLGHGDKEPRLKPTCVPALIEYNFQKVA 508

Query: 411 CGFNHTGAL 419
           CG + T  L
Sbjct: 509 CGHSLTVGL 517


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)

Query: 43  WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G++G+LGL      +    P       +     +ACG +HTL LT +G VY+ G   
Sbjct: 4   WGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG LG       S   +  S     +VQI+ G +HS A+TV+G+L+ WG+   GQLG G 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P+P  V  LS     Q   G + ++A+   G++ SWG G  G+ GHG + +IL 
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                    P+L+  LE   +  A+AG  H+  +   G VY +GD    ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 22/225 (9%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           ++SWG G  G+LG    + +       +   PR ++    +     A G  H+  +  +G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVF------NSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY FG      +          P ++  L      ++ CG  H+C LT  G+L++WG  
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
           + G LG GS++    P  V    S+  + QV CG  +T AI S+G++ +W          
Sbjct: 115 KYGQLGCGSVENHLQPVPVT-ALSDRLLTQVVCGADYTMAIDSDGQLFSW---------- 163

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             GH   GQ GHG   + + P +V   EN   +Q S G  H  AL
Sbjct: 164 --GHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
           G  +FGQLG+ +  G    PL R     +E+  V+++ G  H+ A+T  G++Y +G+ + 
Sbjct: 5   GCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG G   +   P+   V+ L G+   Q A G   S A+T  G++ SWG G  G+LG G
Sbjct: 65  GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              + L  +  T+  + RL+ ++          G  ++  ID +G+++ +G     +   
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
              ++   P L+  L      +   G  H   LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 16/227 (7%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           L  WG    GQLGL K AA V   P+P  +     +   + A G   ++A+TG G V S+
Sbjct: 1   LVSWGCGEFGQLGL-KDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G  G LGHG   S           +P ++  L G+ +   A G  HS  +   G+++ 
Sbjct: 60  GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G     ++      +  +P  ++ L      +VVCG  +T  + S G+L++WG    G 
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            G G+ D +  P+ V    +++ V Q S G +H  A+ S G +  WG
Sbjct: 171 TGHGTQDNILVPKLVCSLENDNIV-QASAGARHAVALTSGGGVYAWG 216


>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
          Length = 322

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 126/260 (48%), Gaps = 9/260 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G+   G+LG    +    P    A E   +  ++CG  H+L +   G V+A G    GQL
Sbjct: 48  GDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQL 107

Query: 104 GISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           GI E    S  P +I  L   +++Q+S G++HS A++ D +++ WGKNS+GQLGLGK+  
Sbjct: 108 GIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFP 167

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
                P +V  L GI   Q A G   S A++  G    WG+  +G+L      ++ G   
Sbjct: 168 SQAS-PQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL------ALSGRNV 220

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  +  L+ + V   + G  H+A + ++G+V+ FGD    ++ +      R P 
Sbjct: 221 PVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQ 280

Query: 283 LISKLP-YSEEVVCGGYHTC 301
           L+ ++     ++ CG    C
Sbjct: 281 LVERIDGLVSQIDCGRLRGC 300



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 131/280 (46%), Gaps = 20/280 (7%)

Query: 77  ACGGAHTLFLTETGCVYATGLNDFGQLGIS-ENIGYSLEPLRISGLKKEVVQ-ISTGYHH 134
           A G  H+L L     V + G N  GQLG      G   EP  I  L+  +V  +S G  H
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP--IQALETLIVDLVSCGKEH 86

Query: 135 SSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           S A+   G ++ WG  S GQLG+G+   ++   P K+  L+ I   Q + G   S+A++ 
Sbjct: 87  SLAVCHKGRVFAWGAGSEGQLGIGE-FKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSK 145

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
             +V SWG    G+LG G+E          S+ +P+ ++ LEG+ +   AAG  HS  + 
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEF--------PSQASPQRVRSLEGIPLAQVAAGGAHSFALS 197

Query: 255 ENGRVYIFGDRAVDKMLFQEGN---HARRPSLISKLPYSEEVV--CGGYHTCVLTSGGEL 309
             G  + +G  +  ++     N    + +P  +  L     V   CG  HT VLT  G++
Sbjct: 198 LCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKV 257

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
           +T+G N +G LG         P+ V+    +  V Q+ CG
Sbjct: 258 FTFGDNRSGQLGYSPTPEKRGPQLVE--RIDGLVSQIDCG 295



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 140/301 (46%), Gaps = 41/301 (13%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA 183
           E++Q ++G  HS  +  +  +   G NS GQ  LG++ A+   +P  ++ L  +     +
Sbjct: 24  ELLQAASGERHSLLLLTNHRVLSCGDNSRGQ--LGRRGAQRGELPEPIQALETLIVDLVS 81

Query: 184 LGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIA 243
            G E S+AV   G+V +WGAG  G+LG G+   I         +TP+ I  L  +K+   
Sbjct: 82  CGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEI--------SFTPKKIMTLNDIKIIQV 133

Query: 244 AAGFLHSACIDENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYH 299
           + G  HS  + ++ +V+ +G  +  ++     F      +R   +  +P + +V  GG H
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLA-QVAAGGAH 192

Query: 300 TCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQ-----VSCGWKHTA 354
           +  L+  G  + WGSN  G L +   +V   P +   P S   +       +SCG  HTA
Sbjct: 193 SFALSLCGTSFGWGSNSAGQLALSGRNV---PVQSNKPLSVGALKNLGVVYISCGDAHTA 249

Query: 355 AISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKAL--QVSC 411
            +++ GK+ T+G          D  S  GQLG+    +   P +V   E +  L  Q+ C
Sbjct: 250 VLTQDGKVFTFG----------DNRS--GQLGYSPTPEKRGPQLV---ERIDGLVSQIDC 294

Query: 412 G 412
           G
Sbjct: 295 G 295



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 20/212 (9%)

Query: 37  RRFAALWGNGDYGRLGLGSL-ESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYAT 95
           R FA  WG G  G+LG+G   E  + P          +  ++CG  H+L L++   V++ 
Sbjct: 95  RVFA--WGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSW 152

Query: 96  GLNDFGQLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQ 154
           G N  GQLG+ +       P R+  L+   + Q++ G  HS A+++ G  + WG NS GQ
Sbjct: 153 GKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQ 212

Query: 155 LGLGKKAAKVIPI----PTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLG 210
           L L   + + +P+    P  V  L  +     + G   +  +T  GKV ++G   SG+LG
Sbjct: 213 LAL---SGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLG 269

Query: 211 HGQESSILGFLRSTSEYTPRLIKELEGVKVKI 242
           +       G         P+L++ ++G+  +I
Sbjct: 270 YSPTPEKRG---------PQLVERIDGLVSQI 292



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 30/249 (12%)

Query: 181 QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH-GQESSILGFLRSTSEYTPRLIKELEGVK 239
           QAA G   S+ +    +VLS G    G+LG  G +   L          P  I+ LE + 
Sbjct: 27  QAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGEL----------PEPIQALETLI 76

Query: 240 VKIAAAGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARRPSLISKLPYSEEVVCG 296
           V + + G  HS  +   GRV+ +G  +  ++    F+E +   +  +        +V CG
Sbjct: 77  VDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQVSCG 136

Query: 297 GYHTCVLTSGGELYTWGSNENGCLGIGS-IDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
            YH+  L+   ++++WG N +G LG+G       SP+RV+      P+ QV+ G  H+ A
Sbjct: 137 HYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRS-LEGIPLAQVAAGGAHSFA 195

Query: 356 ISEGKILTWGWGGSHGTFSEDGHSSGGQL---GHGNDVDYIHPTIVNFGENVKALQVSCG 412
           +S     ++GWG +          S GQL   G    V    P  V   +N+  + +SCG
Sbjct: 196 LSLCGT-SFGWGSN----------SAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCG 244

Query: 413 FNHTGALLE 421
             HT  L +
Sbjct: 245 DAHTAVLTQ 253



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 18/201 (8%)

Query: 224 TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSL 283
           + E   R      G ++  AA+G  HS  +  N RV   GD +  ++  +       P  
Sbjct: 9   SRELQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEP 68

Query: 284 ISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI-DVLHSPERVQGPFSE 340
           I  L     + V CG  H+  +   G ++ WG+   G LGIG   ++  +P+++    ++
Sbjct: 69  IQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIM-TLND 127

Query: 341 SPVDQVSCGWKHTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV-DYIHPTIV 398
             + QVSCG  H+ A+S + ++ +W            G +S GQLG G +      P  V
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSW------------GKNSHGQLGLGKEFPSQASPQRV 175

Query: 399 NFGENVKALQVSCGFNHTGAL 419
              E +   QV+ G  H+ AL
Sbjct: 176 RSLEGIPLAQVAAGGAHSFAL 196


>gi|296445916|ref|ZP_06887867.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256584|gb|EFH03660.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 492

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 144/327 (44%), Gaps = 23/327 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  DYG+LG G++  R  PV  S      + A++ G  H+  LT  G V   G N  GQ
Sbjct: 115 WGRNDYGQLGDGTMVRRSSPVSVSGLPS-DIVAISMGDGHSCALTSAGAVECWGWNQVGQ 173

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG       S  P  ++ L   VV I++G  HS A+T  G +  WG N  GQLG G    
Sbjct: 174 LGDGTYPNRS-APGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQLGAGTPTY 232

Query: 163 KVIPIPTKVECLSGIFTKQAAL--GFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGF 220
              PI      ++G+ +   A+  G + S A+   G V  WG+   G+LG G  ++    
Sbjct: 233 HRTPI-----GVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN---- 283

Query: 221 LRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR 280
                  TP  +  L    V I A G+ HS  + + G V  +GD +  ++          
Sbjct: 284 -----RATPVAVPSLSSGVVAITA-GWGHSCALTKAGAVVCWGDNSNGQIGDGTTTTRHT 337

Query: 281 PSLISKLPYSE-EVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
           P ++S L      +  G  H C L   G +  WGSN++G LG  ++    +P  V  P  
Sbjct: 338 PVVVSGLTSGVVAIATGSNHNCALKGNGAVLCWGSNQDGVLGDRTMTNRTTPVAV--PGH 395

Query: 340 ESPVDQVSCGWKHT-AAISEGKILTWG 365
              V  ++ G  HT   IS G +  WG
Sbjct: 396 TRGVVAIALGSDHTCVTISSGVVRCWG 422



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 132/286 (46%), Gaps = 20/286 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG    G+LG G+  +R  P V +      + A+A G  H+  LT  G V   G N  GQ
Sbjct: 166 WGWNQVGQLGDGTYPNRSAPGVVTRLSS-GVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG      Y   P+ ++GL+  VV I+ G  HS A+   G +  WG NS+GQLG G  A 
Sbjct: 225 LGAGTPT-YHRTPIGVTGLRSGVVAIAGGNQHSCALATAGAVKCWGSNSHGQLGDGTTAN 283

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P+       SG+    A  G+  S A+T  G V+ WG   +G++G G          
Sbjct: 284 RATPVAVP-SLSSGVVAITA--GWGHSCALTKAGAVVCWGDNSNGQIGDGT--------- 331

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           +T+ +TP ++  L    V I A G  H+  +  NG V  +G       +  +     R +
Sbjct: 332 TTTRHTPVVVSGLTSGVVAI-ATGSNHNCALKGNGAVLCWGSN--QDGVLGDRTMTNRTT 388

Query: 283 LISKLPYSEEVVC---GGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
            ++   ++  VV    G  HTCV  S G +  WGS+  G LG G+ 
Sbjct: 389 PVAVPGHTRGVVAIALGSDHTCVTISSGVVRCWGSDGLGQLGDGTF 434



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 136/295 (46%), Gaps = 24/295 (8%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHS 135
           L+ GG H+  L   G V   G ND+GQLG    +  S  P+ +SGL  ++V IS G  HS
Sbjct: 96  LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRS-SPVSVSGLPSDIVAISMGDGHS 154

Query: 136 SAITVDGELYMWGKNSNGQLGLGKKAAKVIP-IPTKVECLSGIFTKQAALGFEQSVAVTG 194
            A+T  G +  WG N  GQLG G    +  P + T++   SG+     A G   S A+T 
Sbjct: 155 CALTSAGAVECWGWNQVGQLGDGTYPNRSAPGVVTRLS--SGVV--AIASGDVHSCALTS 210

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G V  WG+  +G+LG G           T   TP  +  L    V I A G  HS  + 
Sbjct: 211 VGAVKCWGSNVAGQLGAGTP---------TYHRTPIGVTGLRSGVVAI-AGGNQHSCALA 260

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYT 311
             G V  +G  +  ++   +G  A R + ++    S  VV    G  H+C LT  G +  
Sbjct: 261 TAGAVKCWGSNSHGQL--GDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVVC 318

Query: 312 WGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWG 365
           WG N NG +G G+    H+P  V G    S V  ++ G  H  A+   G +L WG
Sbjct: 319 WGDNSNGQIGDGTTTTRHTPVVVSG--LTSGVVAIATGSNHNCALKGNGAVLCWG 371



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 129/296 (43%), Gaps = 34/296 (11%)

Query: 128 ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAA--LG 185
           +S G  HS A+   G +  WG+N  GQLG G    +  P+      +SG+ +   A  +G
Sbjct: 96  LSMGGQHSCALPAAGGVSCWGRNDYGQLGDGTMVRRSSPV-----SVSGLPSDIVAISMG 150

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAA 245
              S A+T  G V  WG    G+LG G   +            P ++  L    V IA+ 
Sbjct: 151 DGHSCALTSAGAVECWGWNQVGQLGDGTYPN---------RSAPGVVTRLSSGVVAIAS- 200

Query: 246 GFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG-YHTCVLT 304
           G +HS  +   G V  +G     ++      + R P  ++ L      + GG  H+C L 
Sbjct: 201 GDVHSCALTSVGAVKCWGSNVAGQLGAGTPTYHRTPIGVTGLRSGVVAIAGGNQHSCALA 260

Query: 305 SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILT 363
           + G +  WGSN +G LG G+     +P  V  P   S V  ++ GW H+ A+++ G ++ 
Sbjct: 261 TAGAVKCWGSNSHGQLGDGTTANRATPVAV--PSLSSGVVAITAGWGHSCALTKAGAVVC 318

Query: 364 WGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
           W            G +S GQ+G G       P +V+ G     + ++ G NH  AL
Sbjct: 319 W------------GDNSNGQIGDGTTTTRHTPVVVS-GLTSGVVAIATGSNHNCAL 361



 Score = 45.4 bits (106), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 112/287 (39%), Gaps = 45/287 (15%)

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           K  + + +  +V+ L G  T    +GF       G G +  +GAG +     GQ S  L 
Sbjct: 50  KLGQTVKLVGEVDGLGGAPT--GTVGFADGAITLGAGPLSPYGAGQATLSMGGQHSCALP 107

Query: 220 FLRSTS-----------------EYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIF 262
                S                   +P  +  L    V I + G  HS  +   G V  +
Sbjct: 108 AAGGVSCWGRNDYGQLGDGTMVRRSSPVSVSGLPSDIVAI-SMGDGHSCALTSAGAVECW 166

Query: 263 GDRAVDKMLFQEGNHARR--PSLISKLPYS-EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           G   V ++   +G +  R  P ++++L      +  G  H+C LTS G +  WGSN  G 
Sbjct: 167 GWNQVGQL--GDGTYPNRSAPGVVTRLSSGVVAIASGDVHSCALTSVGAVKCWGSNVAGQ 224

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGH 378
           LG G+     +P  V G    S V  ++ G +H+ A+ + G +  W            G 
Sbjct: 225 LGAGTPTYHRTPIGVTG--LRSGVVAIAGGNQHSCALATAGAVKCW------------GS 270

Query: 379 SSGGQLGHGNDVDYIHPTIV-NFGENVKALQV----SCGFNHTGALL 420
           +S GQLG G   +   P  V +    V A+      SC     GA++
Sbjct: 271 NSHGQLGDGTTANRATPVAVPSLSSGVVAITAGWGHSCALTKAGAVV 317


>gi|398332633|ref|ZP_10517338.1| RCC1 domain-containing protein [Leptospira alexanderi serovar
           Manhao 3 str. L 60]
          Length = 527

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 138/299 (46%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 223 WGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 280

Query: 93  YATGLNDFGQLGISEN----IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            A G N+ GQLG   N      +S++P+ + GL+ +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 281 VAFGQNNVGQLGNGANNLNADSFSMDPVAVVGLR-DVIQVIAGSEHSAALTENGEVYVWG 339

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A      IP KVE L GI  KQ A G +  +A+   G++ SWG   S
Sbjct: 340 RNQYGNLGNGRLSAANAAQSIPVKVEGLPGI--KQIANGRDHILALASDGRIYSWGLNAS 397

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 398 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 449

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 450 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 508



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 160/363 (44%), Gaps = 41/363 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L+ GGAH+ FL + G VY  G N+FGQLG   + G     + +       +  I    ++
Sbjct: 152 LSAGGAHSGFL-KNGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSISNIFSIHFNQNN 210

Query: 135 SSAITVDGELYMWGKNSNGQLGLGK--------KAAKVIPIPTKVECLSGIFTKQAALGF 186
           S AI  +G +Y WG N+ GQLG+G         +AA     PT V  +        A GF
Sbjct: 211 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTLVPGIDDAV--MGAYGF 268

Query: 187 EQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAAA 245
             ++ +   G V+++G    G+LG+G  +     L + S    P  +  L  V   I  A
Sbjct: 269 NHALILKSDGTVVAFGQNNVGQLGNGANN-----LNADSFSMDPVAVVGLRDVIQVI--A 321

Query: 246 GFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHTC 301
           G  HSA + ENG VY++G      +        N A+  P  +  LP  +++  G  H  
Sbjct: 322 GSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQIANGRDHIL 381

Query: 302 VLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE 358
            L S G +Y+WG N +G LGI   GS +    P +V    + S V   + G +  + +  
Sbjct: 382 ALASDGRIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILKS 439

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHTG 417
           G++  WG          +G+++   +G  N +    P     G +NV  +   CG  H  
Sbjct: 440 GEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHNF 488

Query: 418 ALL 420
            LL
Sbjct: 489 VLL 491



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 23/265 (8%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA-KVIPIPTKVECL 174
           L+KEV      ++S G  HS  +  +GE+Y  G+N+ GQLG G     +   +  K+  +
Sbjct: 140 LQKEVNFYFGTKLSAGGAHSGFLK-NGEVYTAGRNNFGQLGTGNSTGDENNDVIVKLNSI 198

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 199 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRAAGNRQPPTL 254

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           +  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 255 VPGID--DAVMGAYGFNHALILKSDGTVVAFGQNNVGQLGNGANNLNADSFSMDPVAVVG 312

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQ 345
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   ++ + +       P + Q
Sbjct: 313 LRDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSIPVKVEGLPGIKQ 372

Query: 346 VSCGWKHTAAI-SEGKILTWGWGGS 369
           ++ G  H  A+ S+G+I +WG   S
Sbjct: 373 IANGRDHILALASDGRIYSWGLNAS 397



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 72/177 (40%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 337 VWGRNQYGNLGNGRLSAANAAQSIPVKVEGLP--GIKQIANGRDHILALASDGRIYSWGL 394

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 395 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 454

Query: 156 GLGKKAAKVIPIPTKVECLSGIFTK-QAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K   + GI        G   +  + G G++  WG    G LG 
Sbjct: 455 AIGETNTLKVYEPNK--AVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 509


>gi|328876892|gb|EGG25255.1| inositol 5-phosphatase [Dictyostelium fasciculatum]
          Length = 1338

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 80/353 (22%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           + +++CG  HT+  T+   V++ G N+ GQLG+ ++I  S  PLR+  L  ++ QI  G 
Sbjct: 79  VNSVSCGLNHTILSTDDDGVWSMGYNNEGQLGVGQDISESAVPLRVL-LPPDIRQIVAGP 137

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGK---KAAKVIPIPTKV--ECLSGIFT-------- 179
              +AIT DGELYMWG    GQL  GK   +A +++P P ++  + L+   +        
Sbjct: 138 MTGAAITSDGELYMWGSAKYGQLANGKASDRANQMVPQPAQLPLDDLNVSSSSVGSGGRV 197

Query: 180 --KQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
             ++   G + ++ +T  G V SWG    G+LG G  ++             ++I  L  
Sbjct: 198 RWRKVTFGEKHTIGLTRRGTVYSWGINEFGQLGLGHRNN-------------KVIPVL-- 242

Query: 238 VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGG 297
           V +K  A G        EN   +   D                            +  GG
Sbjct: 243 VDLKSMAGG--------ENNAYFKIVD----------------------------ISSGG 266

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
           YH+  L+  G LY WGSN+ G +G G ++   SP +++    +  V +V+ G  HT  ++
Sbjct: 267 YHSSALSEEGILYCWGSNQYGQIGNGDLEDQVSPVKIKVDVEDKKVKKVAMGSNHTVLVT 326

Query: 358 -EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQV 409
             G++ T+            G+S   QLGHGN+ + + P+++     +KA  +
Sbjct: 327 ITGEVYTF------------GNSDYYQLGHGNNKNRMWPSLIVKPPKLKASDI 367



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 100/200 (50%), Gaps = 26/200 (13%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFE-----------------KHSLKALACGGAHTL 84
           +WG+  YG+L  G    R   +V    +                 +   + +  G  HT+
Sbjct: 151 MWGSAKYGQLANGKASDRANQMVPQPAQLPLDDLNVSSSSVGSGGRVRWRKVTFGEKHTI 210

Query: 85  FLTETGCVYATGLNDFGQLGI----SENIGYSLEPLRISGLKK----EVVQISTGYHHSS 136
            LT  G VY+ G+N+FGQLG+    ++ I   ++   ++G +     ++V IS+G +HSS
Sbjct: 211 GLTRRGTVYSWGINEFGQLGLGHRNNKVIPVLVDLKSMAGGENNAYFKIVDISSGGYHSS 270

Query: 137 AITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGG 196
           A++ +G LY WG N  GQ+G G    +V P+  KV+ +     K+ A+G   +V VT  G
Sbjct: 271 ALSEEGILYCWGSNQYGQIGNGDLEDQVSPVKIKVD-VEDKKVKKVAMGSNHTVLVTITG 329

Query: 197 KVLSWGAGGSGRLGHGQESS 216
           +V ++G     +LGHG   +
Sbjct: 330 EVYTFGNSDYYQLGHGNNKN 349



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 88/168 (52%), Gaps = 22/168 (13%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVC----------SAFEKHSLKALACGGAHTLFLTETGCV 92
           WG  ++G+LGLG   ++  PV+           +A+ K  +  ++ GG H+  L+E G +
Sbjct: 221 WGINEFGQLGLGHRNNKVIPVLVDLKSMAGGENNAYFK--IVDISSGGYHSSALSEEGIL 278

Query: 93  YATGLNDFGQLGISENIGYSLEPLRI--SGLKKEVVQISTGYHHSSAITVDGELYMWGKN 150
           Y  G N +GQ+G + ++   + P++I      K+V +++ G +H+  +T+ GE+Y +G +
Sbjct: 279 YCWGSNQYGQIG-NGDLEDQVSPVKIKVDVEDKKVKKVAMGSNHTVLVTITGEVYTFGNS 337

Query: 151 SNGQLGLGKKAAKVIP----IPTKVECLSGIFT--KQAALGFEQSVAV 192
              QLG G    ++ P     P K++  S IF     +AL  E S +V
Sbjct: 338 DYYQLGHGNNKNRMWPSLIVKPPKLKA-SDIFAAGDCSALFVEDSSSV 384


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 152/335 (45%), Gaps = 31/335 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG GS E    P +  +    ++  +ACG  HT  +T  G +Y    G ++ 
Sbjct: 101 WGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNI 160

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RISG  +  +V  +S G  H++ +T  G+L+ +G  + G LG G
Sbjct: 161 GLLGNGTDVSHWI-PKRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHG 219

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            + +     P +VE LSG+ T   A G   + AV              GK+ +WG G   
Sbjct: 220 NRES--FSCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKH 277

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG +   L          P  +  L        A G   +  +  +G++   G+  V
Sbjct: 278 RLGHGDKEPRL---------KPTCVASLIDYDFCRIACGHSLTVGLTTSGQILSMGN-TV 327

Query: 268 DKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSI 325
              L    +  + P L+  +   +  +V CG YH  VLT+  E++TWG   NG LG G I
Sbjct: 328 YGQLGNPRSDGKLPCLVEDIMGEHVVQVACGSYHVAVLTNKSEVFTWGKGANGRLGHGDI 387

Query: 326 DVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGK 360
           +    P  V+    +  V  ++CG   T+AI + K
Sbjct: 388 EDRKIPTLVEA-LRDRGVRHIACGSNFTSAICQHK 421



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 161/365 (44%), Gaps = 48/365 (13%)

Query: 78  CGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI-STGYHHSS 136
           CG  H   +T+ G V+  G    G+LG       S+ P  +  L    V I + G  H+ 
Sbjct: 84  CGVKHAALVTKNGEVFTWGEESGGRLGHGSRED-SVHPRLVESLAICNVDIVACGEFHTC 142

Query: 137 AITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVAVT 193
           A+T  GELY WG  ++  G LG G   +  IP   ++   L G      + G   +  VT
Sbjct: 143 AVTTAGELYTWGDGTHNIGLLGNGTDVSHWIP--KRISGALEGHQVAYVSCGTWHTALVT 200

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G++ ++G G  G LGHG   S            PR ++ L G+K    A G  H+A +
Sbjct: 201 SRGQLFTFGDGTFGVLGHGNRESF---------SCPREVESLSGLKTIAVACGVWHTAAV 251

Query: 254 DE-----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSE--EVVCGGY 298
            E           +G+++ +GD   DK     G+   R  P+ ++ L   +   + CG  
Sbjct: 252 VEVIVTQSSSSMSSGKLFTWGDG--DKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHS 309

Query: 299 HTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS- 357
            T  LT+ G++ + G+   G LG    D    P  V+    E  V QV+CG  H A ++ 
Sbjct: 310 LTVGLTTSGQILSMGNTVYGQLGNPRSDG-KLPCLVEDIMGEHVV-QVACGSYHVAVLTN 367

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTG 417
           + ++ TWG G +            G+LGHG+  D   PT+V    +     ++CG N T 
Sbjct: 368 KSEVFTWGKGAN------------GRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTS 415

Query: 418 ALLEY 422
           A+ ++
Sbjct: 416 AICQH 420



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 107/213 (50%), Gaps = 22/213 (10%)

Query: 220 FLRSTSEYTPRLIKELEG---VKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGN 276
            +RST +    L K LE    + V     G  H+A + +NG V+ +G+ +  ++      
Sbjct: 56  VIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSRE 115

Query: 277 HARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SP 331
            +  P L+  L     + V CG +HTC +T+ GELYTWG  ++  G LG G+ DV H  P
Sbjct: 116 DSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGT-DVSHWIP 174

Query: 332 ERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDV 390
           +R+ G      V  VSCG  HTA + S G++ T+G     GTF        G LGHGN  
Sbjct: 175 KRISGALEGHQVAYVSCGTWHTALVTSRGQLFTFG----DGTF--------GVLGHGNRE 222

Query: 391 DYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            +  P  V     +K + V+CG  HT A++E +
Sbjct: 223 SFSCPREVESLSGLKTIAVACGVWHTAAVVEVI 255


>gi|421100544|ref|ZP_15561167.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200901122]
 gi|410796347|gb|EKR98483.1| chromosome condensation regulator RCC1 repeat protein [Leptospira
           borgpetersenii str. 200901122]
          Length = 506

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 137/299 (45%), Gaps = 33/299 (11%)

Query: 43  WGNGDYGRLGLGSLES----------RWRPVVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           WGN   G+LG+G+  +          R  P +    +   + A   G  H L L   G V
Sbjct: 202 WGNNAKGQLGIGNNNTNPANPRTAGNRQPPTLVPGIDDAVMGAY--GFNHALILKSDGTV 259

Query: 93  YATGLNDFGQLGISENI----GYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWG 148
            + G N+ GQLG   N      +S+ P+ + GLK +V+Q+  G  HS+A+T +GE+Y+WG
Sbjct: 260 VSFGQNNVGQLGNGANDLNADSFSMNPVAVVGLK-DVIQVIAGSEHSAALTENGEVYVWG 318

Query: 149 KNSNGQLGLGKKAA--KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGS 206
           +N  G LG G+ +A       P KVE LSGI  KQ A G +  +A+   GK+ SWG   S
Sbjct: 319 RNQYGNLGNGRLSAANAAQSTPVKVEGLSGI--KQIANGRDHILALASDGKIYSWGLNAS 376

Query: 207 GRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRA 266
           G+LG G   S           TP   + L  +      AG   S  I ++G V  +G   
Sbjct: 377 GQLGIGGNGS--------PNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANG 428

Query: 267 -VDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLG 321
               +   E N  +       +   + V+   CG  H  VL   GE+Y WG N  G LG
Sbjct: 429 NTANLAIGETNTLKVYEPNKAVVGIDNVIHFGCGATHNFVLLGNGEIYGWGWNFKGSLG 487



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 160/364 (43%), Gaps = 43/364 (11%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRIS-GLKKEVVQISTGYHH 134
           L  GGAH+ FL + G VY TG N+FGQLG   + G     + +       +  I    ++
Sbjct: 131 LGAGGAHSGFL-KNGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSISNIFSIHFNQNN 189

Query: 135 SSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIPIPTKVECLSGIFTKQAALG 185
           S AI  +G +Y WG N+ GQLG+G         + A    P PT V  +        A G
Sbjct: 190 SMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQP-PTLVPGIDDAV--MGAYG 246

Query: 186 FEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTS-EYTPRLIKELEGVKVKIAA 244
           F  ++ +   G V+S+G    G+LG+G        L + S    P  +  L+ V   I  
Sbjct: 247 FNHALILKSDGTVVSFGQNNVGQLGNGAND-----LNADSFSMNPVAVVGLKDVIQVI-- 299

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKM---LFQEGNHARR-PSLISKLPYSEEVVCGGYHT 300
           AG  HSA + ENG VY++G      +        N A+  P  +  L   +++  G  H 
Sbjct: 300 AGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEGLSGIKQIANGRDHI 359

Query: 301 CVLTSGGELYTWGSNENGCLGI---GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS 357
             L S G++Y+WG N +G LGI   GS +    P +V    + S V   + G +  + + 
Sbjct: 360 LALASDGKIYSWGLNASGQLGIGGNGSPNPTPIPTQVLNILNASSV--WAGGTQSFSILK 417

Query: 358 EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG-ENVKALQVSCGFNHT 416
            G++  WG          +G+++   +G  N +    P     G +NV  +   CG  H 
Sbjct: 418 SGEVKGWG---------ANGNTANLAIGETNTLKVYEPNKAVVGIDNV--IHFGCGATHN 466

Query: 417 GALL 420
             LL
Sbjct: 467 FVLL 470



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 29/268 (10%)

Query: 121 LKKEV-----VQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAK-VIPIPTKVECL 174
           L+KEV      ++  G  HS  +  +GE+Y  G+N+ GQLG G         +  K+  +
Sbjct: 119 LQKEVNFYFGTKLGAGGAHSGFLK-NGEVYTTGRNNFGQLGTGNSTGDDNNDVIVKLNSI 177

Query: 175 SGIFTKQAALGFEQ--SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST-SEYTPRL 231
           S IF+    + F Q  S+A+   G+V +WG    G+LG G  ++     R+  +   P L
Sbjct: 178 SNIFS----IHFNQNNSMAIAKNGRVYTWGNNAKGQLGIGNNNTNPANPRTAGNRQPPTL 233

Query: 232 IKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-----LFQEGNHARRPSLISK 286
           +  ++     + A GF H+  +  +G V  FG   V ++          + +  P  +  
Sbjct: 234 VPGID--DAVMGAYGFNHALILKSDGTVVSFGQNNVGQLGNGANDLNADSFSMNPVAVVG 291

Query: 287 LPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH----SPERVQGPFSESP 342
           L    +V+ G  H+  LT  GE+Y WG N+ G LG G +   +    +P +V+G    S 
Sbjct: 292 LKDVIQVIAGSEHSAALTENGEVYVWGRNQYGNLGNGRLSAANAAQSTPVKVEG---LSG 348

Query: 343 VDQVSCGWKHTAAI-SEGKILTWGWGGS 369
           + Q++ G  H  A+ S+GKI +WG   S
Sbjct: 349 IKQIANGRDHILALASDGKIYSWGLNAS 376



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 72/177 (40%), Gaps = 11/177 (6%)

Query: 42  LWGNGDYGRLGLGSLE----SRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGL 97
           +WG   YG LG G L     ++  PV         +K +A G  H L L   G +Y+ GL
Sbjct: 316 VWGRNQYGNLGNGRLSAANAAQSTPVKVEGLS--GIKQIANGRDHILALASDGKIYSWGL 373

Query: 98  NDFGQLGISENIGYSLEPLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN-GQL 155
           N  GQLGI  N   +  P+    L       +  G   S +I   GE+  WG N N   L
Sbjct: 374 NASGQLGIGGNGSPNPTPIPTQVLNILNASSVWAGGTQSFSILKSGEVKGWGANGNTANL 433

Query: 156 GLGKKAAKVIPIPTK-VECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGH 211
            +G+     +  P K V  +  +       G   +  + G G++  WG    G LG 
Sbjct: 434 AIGETNTLKVYEPNKAVVGIDNVI--HFGCGATHNFVLLGNGEIYGWGWNFKGSLGR 488


>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
           nagariensis]
 gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
           nagariensis]
          Length = 1660

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 101/180 (56%), Gaps = 6/180 (3%)

Query: 38  RFAALWGNGDYGRLGLG-SLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATG 96
           R  A +G    GRLGLG  L+S++ P + ++   +S+K +ACGGAHT  +T+ G ++  G
Sbjct: 7   RVLATFGTAADGRLGLGFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFG 66

Query: 97  LNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLG 156
           LN +GQLG S    +   PL + GL   VV ++ G +H+ A+T  GE++ WG    GQLG
Sbjct: 67  LNSWGQLGHSRQDKFVASPLEV-GLPDPVVAVAAGGYHTLALTSAGEVWCWGMAGEGQLG 125

Query: 157 LGKKAAKVI----PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           +G+ +          P  V  LSG      A G   S+A+T  G++ SWG G  G LGHG
Sbjct: 126 IGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRGDQGALGHG 185



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 31/207 (14%)

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRV 259
           ++G    GRLG       LGF    S++ PR++  L G  +K  A G  H+A + ++G +
Sbjct: 11  TFGTAADGRLG-------LGFPLK-SQFYPRIVASLAGYSIKQVACGGAHTAVVTDDGAL 62

Query: 260 YIFGDRAVDKMLFQEGNHARRPSLISK-----LPYSE-EVVCGGYHTCVLTSGGELYTWG 313
           + FG  +  ++      H+R+   ++      LP     V  GGYHT  LTS GE++ WG
Sbjct: 63  FTFGLNSWGQL-----GHSRQDKFVASPLEVGLPDPVVAVAAGGYHTLALTSAGEVWCWG 117

Query: 314 SNENGCLGIGSIDV-----LHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
               G LGIG              R+ G  S + V  ++ G  H+ A++  G++ +WG G
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177

Query: 368 GS----HGT--FSEDGHSSGGQLGHGN 388
                 HGT   +   +SSG     GN
Sbjct: 178 DQGALGHGTVAITAGPYSSGAVDSRGN 204



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 106/260 (40%), Gaps = 49/260 (18%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGA 203
           L  +G  ++G+LGLG         P  V  L+G   KQ A G   +  VT  G + ++G 
Sbjct: 9   LATFGTAADGRLGLGFPLKSQF-YPRIVASLAGYSIKQVACGGAHTAVVTDDGALFTFGL 67

Query: 204 GGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG 263
              G+LGH ++     F+ S  E        L    V +AA G+ H+  +   G V+ +G
Sbjct: 68  NSWGQLGHSRQDK---FVASPLEVG------LPDPVVAVAAGGY-HTLALTSAGEVWCWG 117

Query: 264 DRAVDKMLFQE------GNHARRPSLISKLPYSEEV--VCGGYHTCVLTSGGELYTWGSN 315
                ++   E      G     P L+  L  +  V    G +H+  LT  GEL++WG  
Sbjct: 118 MAGEGQLGIGEPSEGATGGRQVEPRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSWGRG 177

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSE 375
           + G LG G++ +        GP+S   VD            S G    WG+G        
Sbjct: 178 DQGALGHGTVAI------TAGPYSSGAVD------------SRGNAYVWGYG-------- 211

Query: 376 DGHSSGGQLGHGNDVDYIHP 395
               +G QLG G   + + P
Sbjct: 212 ----TGYQLGTGRATNEMQP 227


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 154/346 (44%), Gaps = 26/346 (7%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WGN D G+LG G+   R  P          + A++ G  H + +   G     G N F Q
Sbjct: 401 WGNNDSGQLGDGTY-IRHTPTPVPGLT--GVTAVSAGEDHVVAVLSDGSPRVWGDNQFMQ 457

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG          P+++ GL  E   ++ G  HS A+  DG ++ WG NS   LGLG +  
Sbjct: 458 LGRPPESVNRGGPVQVPGLT-EASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGDEPG 516

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P P +V  L+G+  +  A G   S+AV   G V++WG G  G+LG  + +SI     
Sbjct: 517 AS-PTPVQVPKLAGV--RSLAAGENSSLAVLANGTVMAWGYGLFGQLGS-ESASIF---- 568

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
                 P  I  L G+     A G  +S  + E+G V+ +G  A  ++     +   RP 
Sbjct: 569 ----QIPEPIFGLSGITA--VAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPG 622

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            ++ L     +  G  H   L + G ++ WGSN  G LG G+     +P +VQG    + 
Sbjct: 623 QVAGLTQVTAIAAGASHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQVQG---LTG 679

Query: 343 VDQVSCGWKHTAAISEGKILTWGWG----GSHGTFSEDGHSSGGQL 384
           V  V+ G  H+ A+ E   + W WG    G  G  +     S GQ+
Sbjct: 680 VIAVAAGEYHSLALREDGTV-WSWGNNNEGQLGDVTASSRQSPGQV 724



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 162/331 (48%), Gaps = 30/331 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+ + G+LG G++E R  PV     +   +  LA G  H+L +   G V A G N +GQ
Sbjct: 249 WGDNESGQLGDGTMEGRLTPV--QVLDLVRVTGLAAGRGHSLAVLADGTVRAWGANIYGQ 306

Query: 103 LGISENIGYSLE----PLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           LG   + G+SLE    P+ +S L  +VV ++     S A+  DG +  WG N +G LG+ 
Sbjct: 307 LG---DGGFSLEGNPRPVAVSKL-TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVE 362

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
           +++     +P+KV  L+ + T   ++G   +VA+ G G V SWG   SG+LG G      
Sbjct: 363 QRSNSR--VPSKVFGLTDVAT--VSVGGYYAVALMGDGTVRSWGNNDSGQLGDGT----- 413

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNH 277
            ++R    +TP  +  L GV     +AG  H   +  +G   ++GD    ++    E  +
Sbjct: 414 -YIR----HTPTPVPGLTGVTA--VSAGEDHVVAVLSDGSPRVWGDNQFMQLGRPPESVN 466

Query: 278 ARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGP 337
              P  +  L  +  V  G  H+  L + G ++ WG N    LG+G  +   SP  VQ P
Sbjct: 467 RGGPVQVPGLTEASLVAAGKTHSLALLADGTVWAWGDNSFSALGLGD-EPGASPTPVQVP 525

Query: 338 FSESPVDQVSCGWKHT-AAISEGKILTWGWG 367
              + V  ++ G   + A ++ G ++ WG+G
Sbjct: 526 -KLAGVRSLAAGENSSLAVLANGTVMAWGYG 555



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 140/294 (47%), Gaps = 20/294 (6%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++A++ G  H L L   G V+A G N  GQLG       S  P+++ GL  EV+ +S   
Sbjct: 177 VRAVSAGNEHALALRTDGTVWAWGSNFAGQLGDGTKTSRS-TPVQVVGLT-EVIAVSAAG 234

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAV 192
           + S A+  DG ++ WG N +GQLG G    ++ P    V+ L  +     A G   S+AV
Sbjct: 235 YSSLALRKDGTVWAWGDNESGQLGDGTMEGRLTP----VQVLDLVRVTGLAAGRGHSLAV 290

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSAC 252
              G V +WGA   G+LG G      GF   + E  PR +   +   V   AA    S  
Sbjct: 291 LADGTVRAWGANIYGQLGDG------GF---SLEGNPRPVAVSKLTDVVSVAASTSLSFA 341

Query: 253 IDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTW 312
           +  +G V  +G      +  ++ +++R PS +  L     V  GGY+   L   G + +W
Sbjct: 342 VHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVGGYYAVALMGDGTVRSW 401

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
           G+N++G LG G+  + H+P  V G    + V  VS G  H  A+ S+G    WG
Sbjct: 402 GNNDSGQLGDGTY-IRHTPTPVPG---LTGVTAVSAGEDHVVAVLSDGSPRVWG 451



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 159/368 (43%), Gaps = 52/368 (14%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +  LGLG  E    P      +   +++LA G   +L +   G V A G   FGQ
Sbjct: 501 WGDNSFSALGLGD-EPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGLFGQ 559

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG SE+      P  I GL   +  ++ G+ +S A+  DG ++ WG N++GQLG G    
Sbjct: 560 LG-SESASIFQIPEPIFGLSG-ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDE 617

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
           +  P P +V  L+ +     A G   ++A+   G V +WG+   G LG G +        
Sbjct: 618 R--PRPGQVAGLTQV--TAIAAGASHALALRADGTVWAWGSNALGTLGDGTQ-------- 665

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            TS  TP  ++ L GV     AAG  HS  + E+G V+ +G+    ++     +  + P 
Sbjct: 666 -TSRSTPVQVQGLTGVIA--VAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPG 722

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI---------GSIDVLHSPER 333
            +  L   + +  G  H      GG L  +G N +G LG+         G I  L +P  
Sbjct: 723 QVPGLAGVQRIAAGEKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIASLRNPR- 781

Query: 334 VQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY 392
                       ++ G  HT A+ ++G +  W WG           ++ GQLG+G   + 
Sbjct: 782 -----------GIAAGIAHTLAVAADGTV--WAWGA----------NATGQLGNGEAANS 818

Query: 393 IHPTIVNF 400
             P  V  
Sbjct: 819 PQPITVKL 826



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 156/352 (44%), Gaps = 50/352 (14%)

Query: 74  KALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYH 133
            A+A G  H+L +   G V   GL+              + P  + GL  +V  +S G  
Sbjct: 136 PAVAAGRYHSLMVRPDGTVLEWGLSYL-------RFDGGVRP--VPGLT-DVRAVSAGNE 185

Query: 134 HSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT 193
           H+ A+  DG ++ WG N  GQLG G K ++  P+  +V  L+ +    AA G+  S+A+ 
Sbjct: 186 HALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPV--QVVGLTEVIAVSAA-GYS-SLALR 241

Query: 194 GGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACI 253
             G V +WG   SG+LG G     L         TP  ++ L+ V+V   AAG  HS  +
Sbjct: 242 KDGTVWAWGDNESGQLGDGTMEGRL---------TP--VQVLDLVRVTGLAAGRGHSLAV 290

Query: 254 DENGRVYIFGDRAVDKM----LFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGEL 309
             +G V  +G     ++       EGN   RP  +SKL     V      +  + S G +
Sbjct: 291 LADGTVRAWGANIYGQLGDGGFSLEGNP--RPVAVSKLTDVVSVAASTSLSFAVHSDGTV 348

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC-GWKHTAAISEGKILTWGWGG 368
            +WGSN +G LG+        P +V   F  + V  VS  G+   A + +G + +W    
Sbjct: 349 SSWGSNVDGALGVEQRSNSRVPSKV---FGLTDVATVSVGGYYAVALMGDGTVRSW---- 401

Query: 369 SHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALL 420
                   G++  GQLG G  + +  PT V     V A  VS G +H  A+L
Sbjct: 402 --------GNNDSGQLGDGTYIRHT-PTPVPGLTGVTA--VSAGEDHVVAVL 442


>gi|296445910|ref|ZP_06887861.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
 gi|296256578|gb|EFH03654.1| regulator of chromosome condensation RCC1 [Methylosinus
           trichosporium OB3b]
          Length = 484

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 163/394 (41%), Gaps = 35/394 (8%)

Query: 9   MTKYYLKQDIKLGSKLGICKRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAF 68
           ++ Y   Q    G     C    +S +Q      WG+  YG+LG G++  R+ PV  S  
Sbjct: 74  LSPYGAGQATLAGGSYHTCVLGAASDVQ-----CWGDNSYGQLGDGTITDRYSPVAVSGL 128

Query: 69  EKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQI 128
               L A+  G  HT  LT  G V   G N FG LG    +   L P+ + GL   VV I
Sbjct: 129 SSGVL-AIVAGAHHTCALTAAGAVACWGPNYFGMLGDGTGV-QRLTPVAVQGLSSGVVAI 186

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           + G  H+ A+T+ G +  WG N+ GQLG G K  + +P+   V+ LS      AA G E 
Sbjct: 187 AAGGLHTCALTIAGAVKCWGSNAKGQLGDGTKLDRYVPV--AVQGLSSGVVAIAA-GAEH 243

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           S A+T  G V  WG+  +G +G G     L          P  +  L    V I +AG  
Sbjct: 244 SCALTSVGAVKCWGSNEAGAVGDGTSGYHL------YRLVPVAVSGLSRDIVAI-SAGNN 296

Query: 249 HSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHT---CVLTS 305
           H+  +     V  +G     ++          P  +S L      +  G  +   C L  
Sbjct: 297 HTCALTAARAVKCWGLNTYGELGDGTTTSRNIPVPVSGLSSGVVAISTGATSQFNCALKG 356

Query: 306 GGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTA-AISEGKILTW 364
           GG +  WG N  G LG  S+    +P  V G   +  VD ++ G  HT  +I  G +  W
Sbjct: 357 GGGVLCWGRNHFGELGDLSVTDRSTPVAVAGHTRD--VDAIALGKFHTCISIGSGIVRCW 414

Query: 365 GWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
                       G ++ GQLG G   +   P  V
Sbjct: 415 ------------GRNNAGQLGDGTIANRRSPAPV 436



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 114/285 (40%), Gaps = 43/285 (15%)

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
            KA + + +  +V+ L G       + F +     G G +  +GAG +   G    + +L
Sbjct: 36  SKAGQTVKLVAEVDGLGG-GAPTGTVSFAEGAVALGAGILSPYGAGQATLAGGSYHTCVL 94

Query: 219 GFLRS-----------------TSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G                     T  Y+P  +  L    + I  AG  H+  +   G V  
Sbjct: 95  GAASDVQCWGDNSYGQLGDGTITDRYSPVAVSGLSSGVLAI-VAGAHHTCALTAAGAVAC 153

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENG 318
           +G       +  +G   +R + ++    S  VV    GG HTC LT  G +  WGSN  G
Sbjct: 154 WGPNYFG--MLGDGTGVQRLTPVAVQGLSSGVVAIAAGGLHTCALTIAGAVKCWGSNAKG 211

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDG 377
            LG G+    + P  VQG    S V  ++ G +H+ A+ S G +  W            G
Sbjct: 212 QLGDGTKLDRYVPVAVQG--LSSGVVAIAAGAEHSCALTSVGAVKCW------------G 257

Query: 378 HSSGGQLGHGNDVDYIH---PTIVNFGENVKALQVSCGFNHTGAL 419
            +  G +G G    +++   P  V+ G +   + +S G NHT AL
Sbjct: 258 SNEAGAVGDGTSGYHLYRLVPVAVS-GLSRDIVAISAGNNHTCAL 301


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 115/232 (49%), Gaps = 14/232 (6%)

Query: 43  WGNGDYGRLGLGSLESRWR---PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLND 99
           WG G++G+LGL      +    P       +     +ACG +HTL LT +G VY+ G   
Sbjct: 4   WGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGT 63

Query: 100 FGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGK 159
           FG LG       S   +  S     +VQI+ G +HS A+TV+G+L+ WG+   GQLG G 
Sbjct: 64  FGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCGS 123

Query: 160 KAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
               + P+P  V  LS     Q   G + ++A+   G++ SWG G  G+ GHG + +IL 
Sbjct: 124 VENHLQPVP--VTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNIL- 180

Query: 220 FLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKML 271
                    P+L+  LE   +  A+AG  H+  +   G VY +GD    ++L
Sbjct: 181 --------VPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQVL 224



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 99/225 (44%), Gaps = 22/225 (9%)

Query: 198 VLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENG 257
           ++SWG G  G+LG    + +       +   PR ++    +     A G  H+  +  +G
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVF------TSPLPRFLRGSRELLFVRVACGSSHTLALTGSG 54

Query: 258 RVYIFGDRAVDKMLFQEGNHARRPSLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSN 315
            VY FG      +          P ++  L      ++ CG  H+C LT  G+L++WG  
Sbjct: 55  DVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRG 114

Query: 316 ENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGSHGTFS 374
           + G LG GS++    P  V    S+  + QV CG  +T AI S+G++ +W          
Sbjct: 115 KYGQLGCGSVENHLQPVPVT-ALSDRLLTQVVCGADYTMAIDSDGQLFSW---------- 163

Query: 375 EDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGAL 419
             GH   GQ GHG   + + P +V   EN   +Q S G  H  AL
Sbjct: 164 --GHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVAL 206



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 16/228 (7%)

Query: 96  GLNDFGQLGISENIGYSLEPL-RISGLKKEV--VQISTGYHHSSAITVDGELYMWGKNSN 152
           G  +FGQLG+ +  G    PL R     +E+  V+++ G  H+ A+T  G++Y +G+ + 
Sbjct: 5   GCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTF 64

Query: 153 GQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
           G LG G   +   P+   V+ L G+   Q A G   S A+T  G++ SWG G  G+LG G
Sbjct: 65  GALGHGTTESCSSPV--IVDSLWGLGIVQIACGDNHSCALTVEGQLFSWGRGKYGQLGCG 122

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLF 272
              + L  +  T+  + RL+ ++          G  ++  ID +G+++ +G     +   
Sbjct: 123 SVENHLQPVPVTA-LSDRLLTQV--------VCGADYTMAIDSDGQLFSWGHGHWGQTGH 173

Query: 273 QEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
              ++   P L+  L      +   G  H   LTSGG +Y WG NE G
Sbjct: 174 GTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQG 221



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 16/227 (7%)

Query: 144 LYMWGKNSNGQLGLGKKAAKVI--PIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSW 201
           L  WG    GQLGL K AA V   P+P  +     +   + A G   ++A+TG G V S+
Sbjct: 1   LVSWGCGEFGQLGL-KDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSF 59

Query: 202 GAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYI 261
           G G  G LGHG   S           +P ++  L G+ +   A G  HS  +   G+++ 
Sbjct: 60  GQGTFGALGHGTTESC---------SSPVIVDSLWGLGIVQIACGDNHSCALTVEGQLFS 110

Query: 262 FGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGC 319
           +G     ++      +  +P  ++ L      +VVCG  +T  + S G+L++WG    G 
Sbjct: 111 WGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHWGQ 170

Query: 320 LGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWG 365
            G G+ D +  P+ V    +++ V Q S G +H  A+ S G +  WG
Sbjct: 171 TGHGTQDNILVPKLVCSLENDNIV-QASAGARHAVALTSGGGVYAWG 216


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 38/296 (12%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYATGLN 98
           WG  + G LGLG+ ++   P    A +   + ++ACGG     H+  +TE G VY  G  
Sbjct: 3   WGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSG 62

Query: 99  DFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
             GQLG  ++    L  L +      +V+++ G  H+  ++  G ++ WG    GQLG+G
Sbjct: 63  KSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVG 122

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSIL 218
                  P+  +V  L G+   + A G   +  VT  G V +WG G +G+LGHG ++   
Sbjct: 123 STHNSNDPV--QVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDA--- 177

Query: 219 GFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQE---- 274
                 S+  P  +K+L G+ V   A G  H+  + E        DRAV    + E    
Sbjct: 178 ------SQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-------DRAVFSWGWDEYGQL 224

Query: 275 ---------GNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLG 321
                    GN  R P  I  L   +++ CG  +T  L+S G++Y +G  ++G LG
Sbjct: 225 GHGGWDIFGGNKNRSPRPIKDL---QQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 34/284 (11%)

Query: 145 YMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALG----FEQSVAVTGGGKVLS 200
           + WG N++G LGLG   A   P P  +  L G+     A G     + S AVT  G+V +
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCP--IIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYT 58

Query: 201 WGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVY 260
           WG+G SG+LGHG   +++          PRLI  L+   +   A G  H+  + + G V+
Sbjct: 59  WGSGKSGQLGHGDSQNLV---------LPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVF 109

Query: 261 IFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTWGSNENG 318
            +G     ++     +++  P  ++ L   +  +V CG  HT V+T  G +YTWG   NG
Sbjct: 110 AWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNG 169

Query: 319 CLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE--GKILTWGWGGSHGTFSED 376
            LG G       P  V+       V  ++CG  HT  +SE    + +WGW          
Sbjct: 170 QLGHGDDASQSRPMYVK-KLHGIYVSTLACGLAHTVVVSEVDRAVFSWGW---------- 218

Query: 377 GHSSGGQLGHGNDVDYIHPTIVNFGENVKAL-QVSCGFNHTGAL 419
                GQLGHG   D            +K L Q++CG ++T AL
Sbjct: 219 --DEYGQLGHGG-WDIFGGNKNRSPRPIKDLQQIACGSSYTLAL 259



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 101/230 (43%), Gaps = 29/230 (12%)

Query: 199 LSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAG----FLHSACID 254
            SWG    G LG G   ++          +P  I  L+G+ V   A G      HSA + 
Sbjct: 1   FSWGFNNDGALGLGTTDAV---------GSPCPIIALQGLLVVSVACGGGSEEQHSAAVT 51

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCGGYHTCVLTSGGELYTW 312
           E G+VY +G     ++   +  +   P LI  L  +   EV CG  HT V++  G ++ W
Sbjct: 52  EQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAW 111

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHG 371
           G    G LG+GS    + P +V        V +V+CG  HTA ++E G + TWGWG    
Sbjct: 112 GWGHFGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVTESGHVYTWGWG---- 166

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
                     GQLGHG+D     P  V     +    ++CG  HT  + E
Sbjct: 167 --------VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSE 208


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 151/334 (45%), Gaps = 37/334 (11%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    GRLG G       P +       ++  +ACG  HT  +T +G +Y    G  + 
Sbjct: 289 WGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNA 348

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P R+SG  +  +V  I+ G  HS+  T +G+L+ +G  + G LG G
Sbjct: 349 GLLGQGTDVSHWI-PKRVSGPLEGLQVFSIACGTWHSALATSNGKLFTFGDGAFGVLGHG 407

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALG----------FEQSVAVTGGGKVLSWGAGGSGR 208
            + +  +  P +V+ LSG+ T + A G            QS A     K+ +WG G   R
Sbjct: 408 DRES--LSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNR 465

Query: 209 LGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVD 268
           LGHG + + L          P  +  L        A G   +  +  +G V+  G  A  
Sbjct: 466 LGHGSKDTYL---------LPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHG 516

Query: 269 KMLFQEGNHA---RRPSLISKL---PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGI 322
           ++    GN A   + P+L+       + EEV CG +H  VLTS  ELYTWG   NG LG 
Sbjct: 517 QL----GNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGH 572

Query: 323 GSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           G  +   +P  V+    +  V  +SCG   T +I
Sbjct: 573 GDTEDRRTPTLVEA-LKDRHVKNISCGSNFTTSI 605



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 163/363 (44%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ +ACG  H   +T  G V+  G    G+LG      +S   L        V  ++ G 
Sbjct: 267 VQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGE 326

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQS 189
           +H+ A+T  G+LY WG  +   G LG G   +  IP   +V   L G+     A G   S
Sbjct: 327 YHTCAVTTSGDLYTWGDGTRNAGLLGQGTDVSHWIP--KRVSGPLEGLQVFSIACGTWHS 384

Query: 190 VAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLH 249
              T  GK+ ++G G  G LGHG   S L F        P+ ++ L G+K    A G  H
Sbjct: 385 ALATSNGKLFTFGDGAFGVLGHGDRES-LSF--------PKEVQLLSGLKTIKVACGVWH 435

Query: 250 SACIDE----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKL-PYS-EEVVCGG 297
           +A I E          + +++ +GD   +++     +    P+ +S L  Y+  ++ CG 
Sbjct: 436 TAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQ 495

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  LT+ G ++T G   +G LG  + D    P  VQ       V++VSCG  H A + 
Sbjct: 496 TLTVALTTSGHVFTMGGTAHGQLGNPASDG-KMPTLVQDSLVGEFVEEVSCGAHHVAVLT 554

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG+  D   PT+V   ++     +SCG N T
Sbjct: 555 SRSELYTWGKGAN------------GRLGHGDTEDRRTPTLVEALKDRHVKNISCGSNFT 602

Query: 417 GAL 419
            ++
Sbjct: 603 TSI 605



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 133/301 (44%), Gaps = 47/301 (15%)

Query: 142 GELYMWGKN-SNGQLGLGKKAAKVIPI------PTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++Y+WG+  S+     G  ++  +PI      P  +E    +  +Q A G      VT 
Sbjct: 225 GDVYLWGEVWSDAVFPDGSMSS--VPIKNDVLTPKPLESNVVLDVQQIACGVRHVALVTR 282

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    GRLGHG E+             PRL++ L    V   A G  H+  + 
Sbjct: 283 QGEVFTWGEESGGRLGHGFETDF---------SCPRLVEFLAVTNVDFVACGEYHTCAVT 333

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEV---VCGGYHTCVLTSGGEL 309
            +G +Y +GD   +  L  +G       P  +S      +V    CG +H+ + TS G+L
Sbjct: 334 TSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGKL 393

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE----------- 358
           +T+G    G LG G  + L  P+ VQ   S     +V+CG  HTAAI E           
Sbjct: 394 FTFGDGAFGVLGHGDRESLSFPKEVQL-LSGLKTIKVACGVWHTAAIVEVMSQSGANVSS 452

Query: 359 GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            K+ TWG G  +            +LGHG+   Y+ PT V+   +    Q++CG   T A
Sbjct: 453 RKLFTWGDGDKN------------RLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVA 500

Query: 419 L 419
           L
Sbjct: 501 L 501



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 19/202 (9%)

Query: 228 TPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL 287
           TP+ ++    + V+  A G  H A +   G V+ +G+ +  ++          P L+  L
Sbjct: 255 TPKPLESNVVLDVQQIACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFL 314

Query: 288 PYS--EEVVCGGYHTCVLTSGGELYTWG--SNENGCLGIGSIDVLH-SPERVQGPFSESP 342
             +  + V CG YHTC +T+ G+LYTWG  +   G LG G+ DV H  P+RV GP     
Sbjct: 315 AVTNVDFVACGEYHTCAVTTSGDLYTWGDGTRNAGLLGQGT-DVSHWIPKRVSGPLEGLQ 373

Query: 343 VDQVSCGWKHTA-AISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFG 401
           V  ++CG  H+A A S GK+ T+G     G F        G LGHG+      P  V   
Sbjct: 374 VFSIACGTWHSALATSNGKLFTFG----DGAF--------GVLGHGDRESLSFPKEVQLL 421

Query: 402 ENVKALQVSCGFNHTGALLEYV 423
             +K ++V+CG  HT A++E +
Sbjct: 422 SGLKTIKVACGVWHTAAIVEVM 443



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+GD  RLG GS ++   P   S+   ++   +ACG   T+ LT +G V+  G    GQ
Sbjct: 458 WGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTMGGTAHGQ 517

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   + G     ++ S + + V ++S G HH + +T   ELY WGK +NG+LG G    
Sbjct: 518 LGNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTED 577

Query: 163 KVIPIPTKVECLSGIFTKQAALG--FEQSVAV 192
           +    PT VE L     K  + G  F  S+ +
Sbjct: 578 RR--TPTLVEALKDRHVKNISCGSNFTTSICI 607


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 128/288 (44%), Gaps = 78/288 (27%)

Query: 114 EPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVEC 173
           E  R  G +++V+ IS G  H+ A+     +  WG+  +GQLG G    +  P+PT V  
Sbjct: 5   EATRNDGQRRKVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDR--PMPTFVSA 62

Query: 174 LSGIFTKQAALGFEQSVAVTGGGKVL-SWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
           L G        G + + A +    V+ SWG G  GRLGHG  S +         + P  I
Sbjct: 63  LDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDL---------FIPHAI 113

Query: 233 KELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEE 292
           K L+G+++K                                                  +
Sbjct: 114 KTLQGLQIK--------------------------------------------------Q 123

Query: 293 VVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHS-PERVQGPFSESPVDQVSCGWK 351
           + CG  H   +T  GE+ +WG N+NG LG+G  ++ HS P+RV+ P +E  V QVSCGW+
Sbjct: 124 IACGDSHCLAVTINGEVQSWGRNQNGQLGVGD-NIDHSFPQRVKLP-AEEEVVQVSCGWR 181

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIV 398
           HT AI+ +  + +WG G S            GQLGHG+ +D   P ++
Sbjct: 182 HTVAITGKSNVFSWGRGTS------------GQLGHGDILDRNMPVLI 217



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 92/173 (53%), Gaps = 5/173 (2%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETG-CVYATGLNDFG 101
           WG G+ G+LG G  E R  P   SA +   + ++ CG  HT   +++   VY+ G  DFG
Sbjct: 38  WGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFG 97

Query: 102 QLGISENIGYSLEPLRISGLKK-EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK 160
           +LG   N      P  I  L+  ++ QI+ G  H  A+T++GE+  WG+N NGQLG+G  
Sbjct: 98  RLG-HGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDN 156

Query: 161 AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQ 213
                P   K+     +   Q + G+  +VA+TG   V SWG G SG+LGHG 
Sbjct: 157 IDHSFPQRVKLPAEEEVV--QVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGD 207



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 79/140 (56%), Gaps = 2/140 (1%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG GD+GRLG G+    + P      +   +K +ACG +H L +T  G V + G N  GQ
Sbjct: 91  WGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQ 150

Query: 103 LGISENIGYSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           LG+ +NI +S  P R+    ++EVVQ+S G+ H+ AIT    ++ WG+ ++GQLG G   
Sbjct: 151 LGVGDNIDHSF-PQRVKLPAEEEVVQVSCGWRHTVAITGKSNVFSWGRGTSGQLGHGDIL 209

Query: 162 AKVIPIPTKVECLSGIFTKQ 181
            + +P+  +   + G   +Q
Sbjct: 210 DRNMPVLIEALSVDGSACEQ 229



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 17/185 (9%)

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVCG 296
           KV + +AG  H+  +     V  +G     ++   +      P+ +S L   E   V+CG
Sbjct: 15  KVLLISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICG 74

Query: 297 GYHTCVLT-SGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
             HT   + S   +Y+WG  + G LG G+   L  P  ++       + Q++CG  H  A
Sbjct: 75  ADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIK-TLQGLQIKQIACGDSHCLA 133

Query: 356 IS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           ++  G++ +WG             +  GQLG G+++D+  P  V      + +QVSCG+ 
Sbjct: 134 VTINGEVQSWG------------RNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWR 181

Query: 415 HTGAL 419
           HT A+
Sbjct: 182 HTVAI 186


>gi|72391922|ref|XP_846255.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
           GUTat10.1]
 gi|62359875|gb|AAX80302.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802791|gb|AAZ12696.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 639

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 165/362 (45%), Gaps = 39/362 (10%)

Query: 35  LQRRFAALWGNGDYGRLGLGSLESRWRP--VVCSAFEKHSLKALACGGAHTLFLTETGCV 92
           ++R+    WG+G  G LG    E    P  V  + F  H +  +A G +++  L   G V
Sbjct: 152 MRRQLLFSWGSGSCGELGTQRFEDCNTPTFVQITPFGVHVVD-VALGASYSCVLASDGNV 210

Query: 93  YATGLNDFGQLGI----------SENIGYSLEPLRISGLKKE-VVQISTGYHHSSAITVD 141
           Y  G  D+GQLG+           +       P RIS  ++E  V ++ GY  + A+T D
Sbjct: 211 YTFGNGDWGQLGLGHTPEVEQHPEDTTTVVTVPQRISMFEREPAVHVAAGYAFAVALTAD 270

Query: 142 GELYMWGKNSNGQLGLGKK----AAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK 197
             +Y WG N++GQ GLG +    + + +  PT V  L G   +Q + G   ++A+   G 
Sbjct: 271 HHVYFWGNNNHGQSGLGPRSFHCSLRKVEEPTLVTTLEGKHIEQLSCGSFFTLALGTDGT 330

Query: 198 VLSWGAGGSGRLGHGQES---------SILGFLRSTSEYT----PRLIKELEGVKVKIAA 244
           + SWG      LG G E+         SI+G   S  E T    P++++     K+    
Sbjct: 331 LYSWGLLDC--LGLGSEAEVRASVTDISIIGKSLSAEERTVVLEPQVVRVPTEHKLVRIH 388

Query: 245 AGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP-SLISKLP--YSEEVVCGGYHTC 301
           AG  HS  I+  G ++ +G     ++   +     RP  ++  L   +  +V CG +HT 
Sbjct: 389 AGQWHSGAINAAGELFTWGVGYQGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTV 448

Query: 302 VLTSGGELYTWGSNENG-CLGIGSIDVLHSPERVQG-PFSESPVDQ-VSCGWKHTAAISE 358
            LT  G +Y WG N +G C    + D + SP RV    F    V + ++CG +HT  + E
Sbjct: 449 ALTDRGAVYCWGDNTSGQCGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVME 508

Query: 359 GK 360
           G 
Sbjct: 509 GP 510



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 141/342 (41%), Gaps = 51/342 (14%)

Query: 116 LRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG---------KKAAKVIP 166
           ++I+     VV ++ G  +S  +  DG +Y +G    GQLGLG         +    V+ 
Sbjct: 182 VQITPFGVHVVDVALGASYSCVLASDGNVYTFGNGDWGQLGLGHTPEVEQHPEDTTTVVT 241

Query: 167 IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSE 226
           +P ++           A G+  +VA+T    V  WG    G+ G G  S     LR   E
Sbjct: 242 VPQRISMFEREPAVHVAAGYAFAVALTADHHVYFWGNNNHGQSGLGPRSFHCS-LRKVEE 300

Query: 227 YTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG------------DRA-------V 267
             P L+  LEG  ++  + G   +  +  +G +Y +G             RA       +
Sbjct: 301 --PTLVTTLEGKHIEQLSCGSFFTLALGTDGTLYSWGLLDCLGLGSEAEVRASVTDISII 358

Query: 268 DKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
            K L  E         + ++P   ++V    G +H+  + + GEL+TWG    G LG G 
Sbjct: 359 GKSLSAEERTVVLEPQVVRVPTEHKLVRIHAGQWHSGAINAAGELFTWGVGYQGRLGHGD 418

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQ 383
              +  P++V G  +   V  V+CG  HT A+++ G +  W            G ++ GQ
Sbjct: 419 NGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYCW------------GDNTSGQ 466

Query: 384 LGHGNDVDYIHPT--IVN--FGENVKALQVSCGFNHTGALLE 421
            G     D I     +VN  F     A  ++CG  HT  ++E
Sbjct: 467 CGARPTTDTITSPYRVVNLEFVAGGVARAIACGRQHTVVVME 508


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 160/363 (44%), Gaps = 40/363 (11%)

Query: 73  LKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGY 132
           ++ +ACG  H    T  G V+A G    G+LG   +   S   L  +     V  ++ G 
Sbjct: 245 VQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGE 304

Query: 133 HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE-CLSGIFTKQAALGFEQSVA 191
            H+ AIT  G+LY WG        LG  A     +P +V   L G+     + G   S  
Sbjct: 305 FHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSAL 364

Query: 192 VTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSA 251
            T  GKV ++G G  G LGHG         R T  Y P+ ++ L G +    A G  HSA
Sbjct: 365 TTSSGKVFTFGDGTFGALGHGN--------RHTVAY-PKEVETLSGFRTIKVACGLWHSA 415

Query: 252 CIDE----------NGRVYIFGDRAVDKMLFQEGNHARR--PSLISKL-PYS-EEVVCGG 297
            I E          + +++ +G  A DK     G+   R  P+ +  L  Y+  +V CG 
Sbjct: 416 AIVETTNQAGVNVISRKLFTWG--AGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGH 473

Query: 298 YHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAI- 356
             T  L++ G ++T GS+ NG LG    D  H P  VQ   +   V+++SCG  H A + 
Sbjct: 474 SMTIALSTSGHVFTMGSSSNGQLGNPKSDGKH-PTPVQDRLAGELVEEISCGSCHVAVLT 532

Query: 357 SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
           S  ++ TWG G +            G+LGHG   D   PT+V   ++     ++CG N T
Sbjct: 533 SRSEVYTWGMGAN------------GRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFT 580

Query: 417 GAL 419
             +
Sbjct: 581 TCI 583



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 159/361 (44%), Gaps = 32/361 (8%)

Query: 14  LKQDIKLGSKLGIC-KRWISSTLQRRFAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHS 72
           L+ D+ L  +   C  R I+ T ++     WG    GRLG G+     RP +  A    +
Sbjct: 237 LESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSN 296

Query: 73  LKALACGGAHTLFLTETGCVYA--TGLNDFGQLGISENIGYSLEPLRISGLKK--EVVQI 128
           ++ +ACG  HT  +T +G +Y    G  + G LG      + L P R+SG  +  +V+ +
Sbjct: 297 VEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWL-PKRVSGPLEGVQVLSV 355

Query: 129 STGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQ 188
           S G  HS+  T  G+++ +G  + G LG G +    +  P +VE LSG  T + A G   
Sbjct: 356 SCGSWHSALTTSSGKVFTFGDGTFGALGHGNR--HTVAYPKEVETLSGFRTIKVACGLWH 413

Query: 189 SVAVTG----------GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGV 238
           S A+              K+ +WGAG    LGHG + + L          P  ++ L   
Sbjct: 414 SAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARL---------VPTCVQSLIDY 464

Query: 239 KVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKL---PYSEEVVC 295
                A G   +  +  +G V+  G  + +  L    +  + P+ +         EE+ C
Sbjct: 465 NFHQVACGHSMTIALSTSGHVFTMGSSS-NGQLGNPKSDGKHPTPVQDRLAGELVEEISC 523

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H  VLTS  E+YTWG   NG LG G ++    P  V+    +  V  ++CG   T  
Sbjct: 524 GSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEA-LKDRHVKSIACGSNFTTC 582

Query: 356 I 356
           I
Sbjct: 583 I 583



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P+ ++    + V+  A G+ H A     G V+ +G+    ++         RP L+  L 
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 293

Query: 289 YS--EEVVCGGYHTCVLTSGGELYTWGSN--ENGCLGIGSIDVLHSPERVQGPFSESPVD 344
            S  E V CG +HTC +T+ G+LYTWG      G LG G+      P+RV GP     V 
Sbjct: 294 VSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVL 353

Query: 345 QVSCG-WKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGEN 403
            VSCG W      S GK+ T+G     GTF        G LGHGN     +P  V     
Sbjct: 354 SVSCGSWHSALTTSSGKVFTFG----DGTF--------GALGHGNRHTVAYPKEVETLSG 401

Query: 404 VKALQVSCGFNHTGALLE 421
            + ++V+CG  H+ A++E
Sbjct: 402 FRTIKVACGLWHSAAIVE 419



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 133/301 (44%), Gaps = 47/301 (15%)

Query: 142 GELYMWGKNSNGQLG-------LGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++Y+WG+     +        L  KA  +IP P + + +  +  +Q A G+      T 
Sbjct: 203 GDVYVWGEVWTDMIPAEGSANYLCSKADILIPKPLESDVVLDV--QQIACGYRHIALTTR 260

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    GRLGHG ++ I           P+L++ L    V+  A G  H+  I 
Sbjct: 261 QGEVFAWGEELGGRLGHGTDADI---------SRPKLVEALAVSNVEYVACGEFHTCAIT 311

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLISKLPYSEEVV---CGGYHTCVLTSGGEL 309
            +G +Y +GD   +  L   G       P  +S      +V+   CG +H+ + TS G++
Sbjct: 312 ASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKV 371

Query: 310 YTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISEG---------- 359
           +T+G    G LG G+   +  P+ V+   S     +V+CG  H+AAI E           
Sbjct: 372 FTFGDGTFGALGHGNRHTVAYPKEVET-LSGFRTIKVACGLWHSAAIVETTNQAGVNVIS 430

Query: 360 -KILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
            K+ TWG G  +             LGHG+    + PT V    +    QV+CG + T A
Sbjct: 431 RKLFTWGAGDKN------------PLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIA 478

Query: 419 L 419
           L
Sbjct: 479 L 479


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 49  GRLGLGSLESRWRPVVCSAFEKHSLKALACG-GAHTLFLTETGCVYATGLNDFGQLGISE 107
           G LGLG  +S   P    +     +  L+ G G H +  T  G V+  G N + QLG + 
Sbjct: 76  GCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLG-NG 134

Query: 108 NIGYSLEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVI 165
              + L P +IS     K+V++++ G +HS  +T DGE++ WG N++GQ+G G  A +  
Sbjct: 135 TTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQ-- 192

Query: 166 PIPTKVE-CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRST 224
           PIP +V  CL        A G   S+AV   G+V  WG  G+G+LG G            
Sbjct: 193 PIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGS---------GG 243

Query: 225 SEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARR---- 280
           ++ TP  +  L+G++V+  A G+ H+  + + G+VY +G  +  ++    GN + +    
Sbjct: 244 NQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQL--GTGNKSNQSYPT 301

Query: 281 PSLISKLPYSEEVVCGGYHTCVL-TSGGELYTWG 313
           P ++ K    E   C   HT    T GG +Y WG
Sbjct: 302 PVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 139/318 (43%), Gaps = 23/318 (7%)

Query: 59  RWRPVVCSAFEKHSLKALAC----GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLE 114
           +W      + E+  L   AC     G   L+ T    ++  G N  G LG+ +    ++E
Sbjct: 30  KWPIFSLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQS-TIE 88

Query: 115 PLRISGLK-KEVVQISTGY-HHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVE 172
           P R+  L  K++  +S G   H    T +GE++ WG N+  QLG G     ++P      
Sbjct: 89  PRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTN 148

Query: 173 CLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLI 232
            LS     + A G   S+ +T  G+V +WG   SG++G G          + ++  PR +
Sbjct: 149 -LSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGP---------TANQPIPRRV 198

Query: 233 KELEGVKVKI-AAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP--Y 289
                 KV +  A G + S  + + G VY++G     ++    G +   P  ++ L    
Sbjct: 199 TGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQGIR 258

Query: 290 SEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCG 349
            + V CG  HT VLT  G++Y WG+N  G LG G+      P  V     +  ++  +C 
Sbjct: 259 VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACH 317

Query: 350 WKHTAAISE--GKILTWG 365
             HT+A     G +  WG
Sbjct: 318 STHTSAAKTQGGHVYMWG 335



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 106/234 (45%), Gaps = 26/234 (11%)

Query: 193 TGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGF-LHSA 251
           T   ++   G   SG LG       LG  +ST E  PR +  L G K+   + G   H  
Sbjct: 62  TVNDEIFVLGTNCSGCLG-------LGDAQSTIE--PRRLDSLSGKKIACLSYGSGPHVV 112

Query: 252 CIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGE 308
                G V+ +G  A  ++     NH   P  IS    +++V+   CG YH+ VLTS GE
Sbjct: 113 LATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           ++ WG N +G +G G       P RV G      V  ++CG   + A+ + G++  WG+ 
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLE 421
           G+            GQLG G+  +   P  V   + ++  +V+CG+ HT  L +
Sbjct: 233 GN------------GQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTD 274



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 32/287 (11%)

Query: 139 TVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGF---EQSVAVTGG 195
           TV+ E+++ G N +G LGLG   + + P   +++ LSG   K A L +      V  T  
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDAQSTIEP--RRLDSLSG--KKIACLSYGSGPHVVLATTE 117

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G+V +WG     +LG+G  +  L   + ++  + + + E+        A G  HS  +  
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEV--------ACGSYHSLVLTS 169

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVV---CGGYHTCVLTSGGELYTW 312
           +G V+ +G     ++      +   P  ++    ++ VV   CG   +  +   GE+Y W
Sbjct: 170 DGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVW 229

Query: 313 GSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKILTWGWGGSHG 371
           G N NG LG+GS     +P RV        V +V+CG+ HT  ++ EG++  WG      
Sbjct: 230 GYNGNGQLGLGSGGNQPTPCRV-AALQGIRVQRVACGYAHTLVLTDEGQVYAWG------ 282

Query: 372 TFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGA 418
                  +S GQLG GN  +  +PT V   ++      +C   HT A
Sbjct: 283 ------ANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 11/139 (7%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG    G+LGLGS  ++  P   +A +   ++ +ACG AHTL LT+ G VYA G N +G
Sbjct: 228 VWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYG 287

Query: 102 QLGISENIGYSLEPLRISGLKKEVVQISTGY--HHSSAITVDGELYMWGKNSNGQLGLGK 159
           QLG       S  P  +   K  +++I+  +  H S+A T  G +YMWG+   GQ     
Sbjct: 288 QLGTGNKSNQSY-PTPVVVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQ-CRGQ----- 340

Query: 160 KAAKVIPIPTKVECLSGIF 178
             + ++P  T   C   +F
Sbjct: 341 --SVILPHLTHFSCTDDVF 357


>gi|303282751|ref|XP_003060667.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458138|gb|EEH55436.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 233

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 115/222 (51%), Gaps = 25/222 (11%)

Query: 225 SEYTPRLIKELEGVKVKIAA--AGFLHSACIDENGRVYIFGDRAVDKM-LFQEGNHAR-- 279
           +E TPRL++ L    V+  +  AG  HSAC+DE+G +Y++G    +++ L  + NH R  
Sbjct: 8   AETTPRLVRSLADDNVRAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHPRGG 67

Query: 280 -----RPSLISKLPYSEEVVCGG-YHTCVLTSGGELYTWGSNENGCLGIGSI---DVLHS 330
                 P+ + +LP      CGG +       G  L +WG+N +G LG G     +   +
Sbjct: 68  DAFVTTPTTVPRLPRVGSFACGGSFSVAANRHGAGLKSWGANGSGELGEGHDAGNESRAA 127

Query: 331 PERVQGPFSESPVD--QVSCGWKHTAAI-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHG 387
           P  V     +   D  +VS GW+H AAI ++G + TWGWGGS G   +D  S+GGQL  G
Sbjct: 128 PRAVDTSSVKGSADFVRVSAGWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGGQLCLG 187

Query: 388 NDVDYIHP-TIVNFGEN-------VKALQVSCGFNHTGALLE 421
            D D+  P  + +F          + A  VSCGFNHT  L++
Sbjct: 188 VDNDFWEPFPVPDFTRRGDGGRRLLAAKDVSCGFNHTVVLVD 229



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 91/217 (41%), Gaps = 42/217 (19%)

Query: 124 EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKK------AAKVIPIPTKVECLSGI 177
             V +  G  HS+ +  DG LY+WG N   QLGLG K          +  PT V  L  +
Sbjct: 24  RAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHPRGGDAFVTTPTTVPRLPRV 83

Query: 178 FTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEG 237
            +      F  +    G G + SWGA GSG LG G ++       + S   PR + +   
Sbjct: 84  GSFACGGSFSVAANRHGAG-LKSWGANGSGELGEGHDAG------NESRAAPRAV-DTSS 135

Query: 238 VK-----VKIAAAGFLHSACIDENGRVYIFG---------DRA----------VDKML-- 271
           VK     V++ +AG+ H+A I  +G VY +G         D A          VD     
Sbjct: 136 VKGSADFVRV-SAGWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGGQLCLGVDNDFWE 194

Query: 272 -FQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGG 307
            F   +  RR     +L  +++V CG  HT VL   G
Sbjct: 195 PFPVPDFTRRGDGGRRLLAAKDVSCGFNHTVVLVDDG 231



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 78/188 (41%), Gaps = 35/188 (18%)

Query: 42  LWGNGDYGRLGLGSLESRWR--------PVVCSAFEKHSLKALACGGAHTLFLTETGC-V 92
           +WG+  Y +LGLG  E+  R        P       +  + + ACGG+ ++     G  +
Sbjct: 46  VWGSNRYNQLGLGGKENHPRGGDAFVTTPTTVPRLPR--VGSFACGGSFSVAANRHGAGL 103

Query: 93  YATGLNDFGQLGISENIG----YSLEPLRISGLK--KEVVQISTGYHHSSAITVDGELYM 146
            + G N  G+LG   + G     +   +  S +K   + V++S G+ H++AI  DG +Y 
Sbjct: 104 KSWGANGSGELGEGHDAGNESRAAPRAVDTSSVKGSADFVRVSAGWRHAAAIATDGGVYT 163

Query: 147 WG-KNSNGQ-------------LGLGKKAAKVIPIPTKVECLSG----IFTKQAALGFEQ 188
           WG   S GQ             LG+     +  P+P       G    +  K  + GF  
Sbjct: 164 WGWGGSAGQHHDDAFSTGGQLCLGVDNDFWEPFPVPDFTRRGDGGRRLLAAKDVSCGFNH 223

Query: 189 SVAVTGGG 196
           +V +   G
Sbjct: 224 TVVLVDDG 231



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 17/182 (9%)

Query: 55  SLESRWRPVVCSAFEKHSLKALA--CGGAHTLFLTETGCVYATGLNDFGQLGI--SEN-- 108
           S E+   P +  +    +++A++   G AH+  + E G +Y  G N + QLG+   EN  
Sbjct: 5   SDEAETTPRLVRSLADDNVRAVSVHAGDAHSACVDEDGTLYVWGSNRYNQLGLGGKENHP 64

Query: 109 ---IGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGE-LYMWGKNSNGQLGLGKKA--- 161
                +   P  +  L + V   + G   S A    G  L  WG N +G+LG G  A   
Sbjct: 65  RGGDAFVTTPTTVPRLPR-VGSFACGGSFSVAANRHGAGLKSWGANGSGELGEGHDAGNE 123

Query: 162 AKVIPIPTKVECLSG--IFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILG 219
           ++  P       + G   F + +A G+  + A+   G V +WG GGS    H    S  G
Sbjct: 124 SRAAPRAVDTSSVKGSADFVRVSA-GWRHAAAIATDGGVYTWGWGGSAGQHHDDAFSTGG 182

Query: 220 FL 221
            L
Sbjct: 183 QL 184


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 175/390 (44%), Gaps = 46/390 (11%)

Query: 42  LWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFG 101
           +WG+    +L  GS++    P + ++F   S + +  G   T  +   G V+A G   +G
Sbjct: 368 VWGSNSSHQLAEGSMDKILVPKLATSF--GSAQQIEAGQYCTFVIFPDGFVHACGKGSYG 425

Query: 102 QLGISENIGYS-LEPLRISG--LKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           +LG+ ++   + L+ L      L K V        H+ A+T+DG++Y WG    G+LG G
Sbjct: 426 RLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVYSWGDGDYGKLGHG 485

Query: 159 KKAAKVIP------IPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHG 212
               + IP      +  KV C         A G+  S AVT  G++ +WG G  GRLGHG
Sbjct: 486 NSQTQKIPKLVEGALGNKVVCC-------IAAGYRHSAAVTEDGELYTWGEGDYGRLGHG 538

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGR-VYIFGDRAVDKML 271
                     + S   P  +K++    V   A G  H+ C+ ++G+ V+ FG     K+ 
Sbjct: 539 D---------NNSRNVPVQVKDV--ANVGQVACGSAHTVCVSQDGQTVWSFGSGDNGKLG 587

Query: 272 FQEGNHARRPSLISKLP--YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLH 329
             + N   +P +I  L      +V CG   +  LTS G++Y WG   +  LG GS+D   
Sbjct: 588 HSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPS--LGTGSVDATS 645

Query: 330 SPERVQGPFSESPVDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGND 389
           +  ++        V  +S G  H  A+++   + + W          G++S GQ G G+ 
Sbjct: 646 ATPKLLLALQSHSVVDISVGDSHCVALTQDNNV-YAW----------GNNSMGQCGQGHC 694

Query: 390 VDYI-HPTIVNFGENVKALQVSCGFNHTGA 418
              I  P  V   + V   Q+S G +HT A
Sbjct: 695 TTPITKPKKVLGLDGVAVHQISAGTSHTVA 724



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 151/336 (44%), Gaps = 45/336 (13%)

Query: 39  FAALWGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGA----HTLFLTETGCVYA 94
           F    G G YGRLGLG   ++ +    + F+   L            HTL LT  G VY+
Sbjct: 415 FVHACGKGSYGRLGLGDSTNQTQLKRLN-FDNECLVKSVSSSKGSDGHTLALTLDGKVYS 473

Query: 95  TGLNDFGQLGISENIGYSLEPLRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNG 153
            G  D+G+LG   +    +  L    L  +VV  I+ GY HS+A+T DGELY WG+   G
Sbjct: 474 WGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEGDYG 533

Query: 154 QLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK-VLSWGAGGSGRLGHG 212
           +LG G   ++ +P+  K     G    Q A G   +V V+  G+ V S+G+G +G+LGH 
Sbjct: 534 RLGHGDNNSRNVPVQVKDVANVG----QVACGSAHTVCVSQDGQTVWSFGSGDNGKLGHS 589

Query: 213 QESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFG--------- 263
             + +         Y P++I+ L+G+ ++    G   S  +   G+VY++G         
Sbjct: 590 DTNRV---------YKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLGTGS 640

Query: 264 ---DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCL 320
                A  K+L    +H+             ++  G  H   LT    +Y WG+N  G  
Sbjct: 641 VDATSATPKLLLALQSHSVV-----------DISVGDSHCVALTQDNNVYAWGNNSMGQC 689

Query: 321 GIGSIDV-LHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G G     +  P++V G      V Q+S G  HT A
Sbjct: 690 GQGHCTTPITKPKKVLG-LDGVAVHQISAGTSHTVA 724



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 37/229 (16%)

Query: 197 KVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDEN 256
           +V  WG+  S +L  G    IL    +TS  + + I+  +     I   GF+H+      
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKILVPKLATSFGSAQQIEAGQYCTFVIFPDGFVHACGKGSY 424

Query: 257 GRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGY--------HTCVLTSGGE 308
           GR+ + GD      L              +L +  E +            HT  LT  G+
Sbjct: 425 GRLGL-GDSTNQTQL-------------KRLNFDNECLVKSVSSSKGSDGHTLALTLDGK 470

Query: 309 LYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAISE-GKILTWGWG 367
           +Y+WG  + G LG G+      P+ V+G      V  ++ G++H+AA++E G++ TWG G
Sbjct: 471 VYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEG 530

Query: 368 GSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHT 416
                         G+LGHG++     P  V    NV   QV+CG  HT
Sbjct: 531 DY------------GRLGHGDNNSRNVPVQVKDVANVG--QVACGSAHT 565


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  112 bits (281), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 113/399 (28%), Positives = 171/399 (42%), Gaps = 71/399 (17%)

Query: 35  LQRRFAAL--WGNGDYGRLGLG--------------SLESRWRPVVCSAFEKHSLKALAC 78
           L  R  AL  WG  D G+LG G              + E+   P   S+ +   +  +A 
Sbjct: 156 LHERHVALYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDGRDVTHVAG 215

Query: 79  GGAHTLFLTETGCVYATGLNDFGQLGISENIGYSL-----EPLRISGLKKEVVQIST--- 130
           G  H++ +T  G VYA G  D    G + +    L     +P  ++     + +++T   
Sbjct: 216 GARHSVAVTSAGEVYAFG--DCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVAC 273

Query: 131 GYHHSSAITVDGELYMWGKNSNGQLGLG---------------KKAAKVIPIPTKVECLS 175
           G  H +A+T  G L  WG    GQLG G               ++ A    +P  V    
Sbjct: 274 GQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGH 333

Query: 176 GIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKEL 235
             FT   A G   ++A+T  G+V S+G G  G LGHG   +            PRL+  L
Sbjct: 334 VKFT-SVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNC---------DVPRLVDAL 383

Query: 236 EGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS----E 291
            GV V   AAG  HSA +  +GRVY +G      +  ++ ++  RP+ +  L  +    E
Sbjct: 384 WGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCE 443

Query: 292 EVVCGGYHTCVLTSGGE--LYTWGSNENGCLGIGSIDVLHSPERV-QGPFSESPVDQVSC 348
           ++ CGG HT  +  GG   L  WG   +G  G G+   + +P  + +    +  V Q+S 
Sbjct: 444 QIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISA 503

Query: 349 GWKHTAAISEGK-ILTWGWGGSHGTFSEDGHSSGGQLGH 386
           G KH+ A++EG  + TW            G  + GQLGH
Sbjct: 504 GSKHSVAVTEGGCVYTW------------GARTQGQLGH 530



 Score =  104 bits (259), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 97/327 (29%), Positives = 146/327 (44%), Gaps = 32/327 (9%)

Query: 115 PLRISGLK-KEVVQISTGYHHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIPIPTKV 171
           P  +S L  ++V  ++ G  HS A+T  GE+Y +G  S     L    +  + +  P +V
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 172 ECLSGIFTKQA--ALGFEQSVAVTGGGKVLSWGAGGSGRLGHG--QESSILGFL------ 221
              +    + A  A G     AVT  G +LSWG    G+LG G  ++SS  G        
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRR 318

Query: 222 RSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRP 281
           R+ +   PRL+     VK    A G  H+  +  NGRV+ FG  A   +   +  +   P
Sbjct: 319 RADASMMPRLVGSGH-VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVP 377

Query: 282 SLISKL--PYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFS 339
            L+  L      ++  G  H+  L++ G +YTWG  + G LG   +D    P  VQ    
Sbjct: 378 RLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQA-LD 436

Query: 340 ESPV--DQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTI 397
           ++ V  +Q++CG  HT AI+         GG  G     G  S G  G G   D + PTI
Sbjct: 437 DAGVRCEQIACGGDHTLAIA---------GGGSGVLLAWGRGSSGPAGTGATADVLTPTI 487

Query: 398 VN---FGENVKALQVSCGFNHTGALLE 421
           ++    G+  K  Q+S G  H+ A+ E
Sbjct: 488 IDRALLGDE-KVFQISAGSKHSVAVTE 513



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 29/254 (11%)

Query: 43  WGNGDYGRLGLGS-LESRWRPVVCSAFEKHS---------------LKALACGGAHTLFL 86
           WGN ++G+LG G   +S  +    S   + +                 ++ACG  HTL L
Sbjct: 290 WGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAGHTLAL 349

Query: 87  TETGCVYATGLNDFGQLGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYM 146
           T  G V++ G   FG LG  + +   +  L  +     V QI+ G +HS++++  G +Y 
Sbjct: 350 TANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYT 409

Query: 147 WGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGK--VLSWGAG 204
           WG+   G LG      +  P P +    +G+  +Q A G + ++A+ GGG   +L+WG G
Sbjct: 410 WGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRG 469

Query: 205 GSGRLGHGQESSILGFLRSTSEYTPRLIKE--LEGVKVKIAAAGFLHSACIDENGRVYIF 262
            SG  G G  + +L         TP +I    L   KV   +AG  HS  + E G VY +
Sbjct: 470 SSGPAGTGATADVL---------TPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTW 520

Query: 263 GDRAVDKMLFQEGN 276
           G R   ++  + G+
Sbjct: 521 GARTQGQLGHELGD 534



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 68/249 (27%), Positives = 102/249 (40%), Gaps = 41/249 (16%)

Query: 200 SWGAGGSGRLGHGQESSILGFLRSTSEY-----TPRLIKELEGVKVKIAAAGFLHSACID 254
           +WG   +G+LG G         R +SE      TPR +  L+G  V   A G  HS  + 
Sbjct: 165 AWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVAVT 224

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARRP--------SLISKLPYSEEVVCGGYHTCVLTSG 306
             G VY FGD + +          R          +  + +P    V CG  H   +T+ 
Sbjct: 225 SAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVTTS 284

Query: 307 GELYTWGSNENGCLGIG------SIDVLHSPERVQGPFSESP---------VDQVSCGWK 351
           G L +WG+ E G LG G      S     S  R +   S  P            V+CG  
Sbjct: 285 GVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGSGHVKFTSVACGAG 344

Query: 352 HTAAIS-EGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVS 410
           HT A++  G++ ++G G            + G LGHG+ ++   P +V+    V   Q++
Sbjct: 345 HTLALTANGRVFSFGRG------------AFGALGHGDRLNCDVPRLVDALWGVGVAQIA 392

Query: 411 CGFNHTGAL 419
            G NH+ +L
Sbjct: 393 AGDNHSASL 401


>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
 gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
          Length = 467

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 137/303 (45%), Gaps = 45/303 (14%)

Query: 62  PVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQLGISENIGYSLEPLRISGL 121
           P + S      + ++A GG HTL L++TG V+  G    GQLG+   +     P  I   
Sbjct: 199 PAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFT 258

Query: 122 KKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPTKVECLSGIFTKQ 181
           +    Q +TG H SS +             NG   L          P +V    G + K+
Sbjct: 259 E----QPTTGKHRSSVV------------HNGSTNL----------PAQVSNFPGSYVKE 292

Query: 182 AALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVK 241
            A G   S  VT  G +L++G G  G+ GHG          +  +  P  +  L G++++
Sbjct: 293 IACGGRHSAVVTDAGTLLTFGWGLYGQCGHGS---------TNDQLRPTSLPSLSGIQIE 343

Query: 242 IAAAGFLHSACIDENGRVYIFGDRAVDKMLF--QEGNHARR----PSLISKLPYSEEVVC 295
             AAG  H+ CI  +GRVY+FG     ++     +G    R    P L SKL   + V C
Sbjct: 344 RIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKL--VKMVSC 401

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G  H+ +L   G++++WG N+ G LG+G     ++P +V  P        V+CGW HT  
Sbjct: 402 GARHSAILLEDGQVFSWGWNKYGQLGVGDSIDRNTPTQV--PIEGCRPKMVACGWWHTLL 459

Query: 356 ISE 358
           ++E
Sbjct: 460 LAE 462



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 134/316 (42%), Gaps = 53/316 (16%)

Query: 111 YSLEPLRIS-GLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIPIPT 169
           +++ P  +S G    +  ++ G  H+ A++  G+++ WG    GQLGLG +  K++  P 
Sbjct: 195 FTVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRV-KMVSSPH 253

Query: 170 KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTP 229
            +      FT+Q   G  +S  V  G   L                             P
Sbjct: 254 LIP-----FTEQPTTGKHRSSVVHNGSTNL-----------------------------P 279

Query: 230 RLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP- 288
             +    G  VK  A G  HSA + + G +  FG     +      N   RP+ +  L  
Sbjct: 280 AQVSNFPGSYVKEIACGGRHSAVVTDAGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSLSG 339

Query: 289 -YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP-VDQV 346
              E +  G +HT  +T  G +Y +G N+ G LG G+      P  ++ P  ES  V  V
Sbjct: 340 IQIERIAAGLWHTMCITIDGRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVKMV 399

Query: 347 SCGWKHTAAISE-GKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVK 405
           SCG +H+A + E G++ +WGW            +  GQLG G+ +D   PT V   E  +
Sbjct: 400 SCGARHSAILLEDGQVFSWGW------------NKYGQLGVGDSIDRNTPTQVPI-EGCR 446

Query: 406 ALQVSCGFNHTGALLE 421
              V+CG+ HT  L E
Sbjct: 447 PKMVACGWWHTLLLAE 462



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 73/145 (50%), Gaps = 5/145 (3%)

Query: 44  GNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQL 103
           G G YG+ G GS   + RP    +     ++ +A G  HT+ +T  G VY  G N FGQL
Sbjct: 313 GWGLYGQCGHGSTNDQLRPTSLPSLSGIQIERIAAGLWHTMCITIDGRVYVFGGNQFGQL 372

Query: 104 GISENIGYSLEP-LRISGLKKEVVQ-ISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKA 161
           G   + G +L   L    L+ ++V+ +S G  HS+ +  DG+++ WG N  GQLG+G   
Sbjct: 373 GTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGVGDSI 432

Query: 162 AKVIPIPTKVECLSGIFTKQAALGF 186
            +  P    +E   G   K  A G+
Sbjct: 433 DRNTPTQVPIE---GCRPKMVACGW 454


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 32/332 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYA--TGLNDF 100
           WG    G LG G  ++  +P +  A    ++  +ACG  H+  +T  G +Y    G ++ 
Sbjct: 302 WGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWGDGTHNA 361

Query: 101 GQLGISENIGYSLEPLRISGLKK--EVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLG 158
           G LG   ++ + + P RI+G  +  ++  ++ G  H++ +T  G+L+ +G  + G LG G
Sbjct: 362 GLLGHGSDVSHWI-PKRIAGPLEGLQIAFVACGPWHTALVTSTGQLFTFGDGTFGVLGHG 420

Query: 159 KKAAKVIPIPTKVECLSGIFTKQAALGFEQSVAVT-----------GGGKVLSWGAGGSG 207
            +  + +  P +VE L G+ T   A G   + AV              GK+ +WG G   
Sbjct: 421 DR--QNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKN 478

Query: 208 RLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAV 267
           RLGHG + + L          P  +  L        A G   +A + ++GRV+  G   V
Sbjct: 479 RLGHGDKEARL---------KPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTMGS-TV 528

Query: 268 DKMLFQEGNHARRPSLI-SKLPYS--EEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGS 324
              L    +  + P L+  K+     EE+ CG YH  VLTS  E+YTWG   NG LG G 
Sbjct: 529 YGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGD 588

Query: 325 IDVLHSPERVQGPFSESPVDQVSCGWKHTAAI 356
           I+   +P  V+    +  V  ++CG  ++AAI
Sbjct: 589 IEDRKTPALVEA-LKDRHVKYIACGSNYSAAI 619



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 167/365 (45%), Gaps = 49/365 (13%)

Query: 76  LACGGAHTLFLTETGCVYATGLNDFGQLG--ISENIGYSLEPLRISGLKKEVVQ-ISTGY 132
           +ACG  H   +T  G V+  G    G LG  + +N+   ++P  +  L    V  ++ G 
Sbjct: 283 IACGVRHASLVTRQGEVFTWGEESGGCLGHGVGKNV---VQPRLVEALTSTTVDFVACGE 339

Query: 133 HHSSAITVDGELYMWGKNSN--GQLGLGKKAAKVIP--IPTKVECLSGIFTKQAALGFEQ 188
            HS A+T+ GELY WG  ++  G LG G   +  IP  I   +E L   F    A G   
Sbjct: 340 FHSCAVTMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFV---ACGPWH 396

Query: 189 SVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFL 248
           +  VT  G++ ++G G  G LGHG   ++           PR ++ L G++    A G  
Sbjct: 397 TALVTSTGQLFTFGDGTFGVLGHGDRQNV---------SYPREVESLLGLRTIAVACGVW 447

Query: 249 HSACIDE-----------NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYSE--EVVC 295
           H+A + E           +G+++ +GD   +++   +     +P+ ++ L  S   ++ C
Sbjct: 448 HTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIAC 507

Query: 296 GGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA 355
           G   T  LT  G ++T GS   G LG    D    P  V    +   +++++CG  H A 
Sbjct: 508 GHSLTAGLTKSGRVFTMGSTVYGQLGNPQSDG-KVPCLVGDKIARESIEEIACGAYHVAV 566

Query: 356 I-SEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
           + S+ ++ TWG G +            G+LGHG+  D   P +V   ++     ++CG N
Sbjct: 567 LTSKNEVYTWGKGAN------------GRLGHGDIEDRKTPALVEALKDRHVKYIACGSN 614

Query: 415 HTGAL 419
           ++ A+
Sbjct: 615 YSAAI 619



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 52/307 (16%)

Query: 142 GELYMWGKNS--NGQLGLGKKAAKVIP-----IPTKVECLSGIFTKQAALGFEQSVAVTG 194
           G++Y+WG+ +  N ++G  K    V P     +P  +E    +     A G   +  VT 
Sbjct: 236 GDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASLVTR 295

Query: 195 GGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACID 254
            G+V +WG    G LGHG   +++          PRL++ L    V   A G  HS  + 
Sbjct: 296 QGEVFTWGEESGGCLGHGVGKNVV---------QPRLVEALTSTTVDFVACGEFHSCAVT 346

Query: 255 ENGRVYIFGDRAVDKMLFQEGNHARR--PSLIS------KLPYSEEVVCGGYHTCVLTSG 306
             G +Y +GD   +  L   G+      P  I+      ++ +   V CG +HT ++TS 
Sbjct: 347 MAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAF---VACGPWHTALVTST 403

Query: 307 GELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAA----------- 355
           G+L+T+G    G LG G    +  P  V+       +  V+CG  HTAA           
Sbjct: 404 GQLFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTI-AVACGVWHTAAVVEVIATHSST 462

Query: 356 -ISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFN 414
            IS GK+ TWG G  +            +LGHG+    + PT V    +    +++CG +
Sbjct: 463 SISSGKLFTWGDGDKN------------RLGHGDKEARLKPTCVAALIDSNFHKIACGHS 510

Query: 415 HTGALLE 421
            T  L +
Sbjct: 511 LTAGLTK 517



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 19/234 (8%)

Query: 196 GKVLSWGAGGSGRLGHGQESSILGFLRSTSEYTPRLIKELEGVKVKIAAAGFLHSACIDE 255
           G V  WG      +  G + ++           PR ++    + V   A G  H++ +  
Sbjct: 236 GDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASLVTR 295

Query: 256 NGRVYIFGDRAVDKMLFQEGNHARRPSLISKLPYS--EEVVCGGYHTCVLTSGGELYTWG 313
            G V+ +G+ +   +    G +  +P L+  L  +  + V CG +H+C +T  GELYTWG
Sbjct: 296 QGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMAGELYTWG 355

Query: 314 --SNENGCLGIGSIDVLH-SPERVQGPFSESPVDQVSCGWKHTAAI-SEGKILTWGWGGS 369
             ++  G LG GS DV H  P+R+ GP     +  V+CG  HTA + S G++ T+G    
Sbjct: 356 DGTHNAGLLGHGS-DVSHWIPKRIAGPLEGLQIAFVACGPWHTALVTSTGQLFTFG---- 410

Query: 370 HGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGENVKALQVSCGFNHTGALLEYV 423
            GTF        G LGHG+  +  +P  V     ++ + V+CG  HT A++E +
Sbjct: 411 DGTF--------GVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVI 456



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 24/177 (13%)

Query: 254 DENGRVYIFG-----------DRAVDKMLFQEGNHARRPSLISKLPYSEEVVCGGYHTCV 302
           D  G VYI+G           D+ V+ +  +      RP   S +     + CG  H  +
Sbjct: 233 DALGDVYIWGEVTCENVKVGADKNVNYVSPRADVLLPRPLESSVVLDVHHIACGVRHASL 292

Query: 303 LTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSCGWKHTAAIS-EGKI 361
           +T  GE++TWG    GCLG G    +  P  V+   + + VD V+CG  H+ A++  G++
Sbjct: 293 VTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEA-LTSTTVDFVACGEFHSCAVTMAGEL 351

Query: 362 LTWGWGGSHGTFSEDGHSSGGQLGHGNDVDY-IHPTIVNFGENVKALQVSCGFNHTG 417
            TWG          DG  + G LGHG+DV + I   I    E ++   V+CG  HT 
Sbjct: 352 YTWG----------DGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTA 398


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 141/292 (48%), Gaps = 20/292 (6%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG  +YG+LG G+      P +       +++A+A G +H L L   G V+A G N+ GQ
Sbjct: 114 WGWNEYGQLGDGTTMDHNTPGMVGGL--GNVRAVAVGISHMLALGNDGTVWAWGKNNCGQ 171

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG   N+  S+ P+R+SGL + +V IS GY+H+ AI   G ++ WG N  GQLG G   +
Sbjct: 172 LGDGTNVD-SMTPVRVSGLPR-IVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNIS 229

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
              P P KV+ L+ +     A G   S+A+   G + +WG+   G LG G          
Sbjct: 230 S--PNPKKVKGLANV--TAVAGGSSFSLALKDDGTIWAWGSNVQGELGVG---------- 275

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
            T++  P  +K      V   AAG   SA I  +G ++++G     K +   G  A  P 
Sbjct: 276 -TTKDCPLPVKVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYI-SGGEDASSPR 333

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERV 334
             S L   + V  G  +   L + G L+  G N+ G LG G+    + P RV
Sbjct: 334 RASGLSNVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARV 385



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 153/366 (41%), Gaps = 35/366 (9%)

Query: 43  WGNGDYGRLGLGSLESRWRPVVCSAFEKHSLKALACGGAHTLFLTETGCVYATGLNDFGQ 102
           WG+  +G LG  S++ ++ P     +   S+ +     A    L + G V+  G N++GQ
Sbjct: 65  WGHSWHGGLGYESVQDQYVPKRVPIYNVTSVDSCF---ASVAALKDDGTVWTWGWNEYGQ 121

Query: 103 LGISENIGYSLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAA 162
           LG    + ++  P  + GL   V  ++ G  H  A+  DG ++ WGKN+ GQLG G    
Sbjct: 122 LGDGTTMDHN-TPGMVGGLGN-VRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVD 179

Query: 163 KVIPIPTKVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLR 222
            + P+  +V  L  I    A  G+  ++A+   G V +WG    G+LG G          
Sbjct: 180 SMTPV--RVSGLPRIVAISA--GYNHNLAIDDAGNVWTWGLNDCGQLGDGT--------- 226

Query: 223 STSEYTPRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPS 282
           + S   P+ +K L    V   A G   S  + ++G ++ +G     ++          P 
Sbjct: 227 NISSPNPKKVKGL--ANVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPV 284

Query: 283 LISKLPYSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESP 342
            +  L     +  GG  +  +T+ G L+ WG NE G    G  D   SP R  G    S 
Sbjct: 285 KVQGLTNVIRIAAGGETSAAITNDGSLWVWGHNEQGKYISGGEDA-SSPRRASG---LSN 340

Query: 343 VDQVSCGWKHTAAISEGKILTWGWGGSHGTFSEDGHSSGGQLGHGNDVDYIHPTIVNFGE 402
           V  V  G  +  A+            + G+    G +  GQLG GN  D   P  V  G 
Sbjct: 341 VKLVDIGTINIIALE-----------NDGSLWVVGDNQFGQLGTGNTYDRNMPARVAIGS 389

Query: 403 NVKALQ 408
           NV   Q
Sbjct: 390 NVGFAQ 395



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 111/258 (43%), Gaps = 26/258 (10%)

Query: 112 SLEPLRISGLKKEVVQISTGYHHSSAITVDGELYMWGKNSNGQLGLGKKAAKVIP--IPT 169
           ++  +R +  +  VV ++ G+  S A+  +G ++ WG + +G LG      + +P  +P 
Sbjct: 30  AMAGVRCAASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPI 89

Query: 170 -KVECLSGIFTKQAALGFEQSVAVTGGGKVLSWGAGGSGRLGHGQESSILGFLRSTSEYT 228
             V  +   F   AAL  +        G V +WG    G+LG G          +    T
Sbjct: 90  YNVTSVDSCFASVAALKDD--------GTVWTWGWNEYGQLGDGT---------TMDHNT 132

Query: 229 PRLIKELEGVKVKIAAAGFLHSACIDENGRVYIFGDRAVDKMLFQEGNHARRPSLISKLP 288
           P ++  L    V+  A G  H   +  +G V+ +G     ++       +  P  +S LP
Sbjct: 133 PGMVGGLG--NVRAVAVGISHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP 190

Query: 289 YSEEVVCGGYHTCVLTSGGELYTWGSNENGCLGIGSIDVLHSPERVQGPFSESPVDQVSC 348
               +  G  H   +   G ++TWG N+ G LG G+     +P++V+G    + V  V+ 
Sbjct: 191 RIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKG---LANVTAVAG 247

Query: 349 GWKHTAAI-SEGKILTWG 365
           G   + A+  +G I  WG
Sbjct: 248 GSSFSLALKDDGTIWAWG 265


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.137    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,282,442,533
Number of Sequences: 23463169
Number of extensions: 329066424
Number of successful extensions: 918293
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4373
Number of HSP's successfully gapped in prelim test: 1407
Number of HSP's that attempted gapping in prelim test: 786738
Number of HSP's gapped (non-prelim): 39342
length of query: 423
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 278
effective length of database: 8,957,035,862
effective search space: 2490055969636
effective search space used: 2490055969636
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)