Query 014536
Match_columns 423
No_of_seqs 19 out of 21
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 13:21:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014536.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014536hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1dkza1 a.8.4.1 (A:507-603) Dn 47.1 13 0.00095 27.0 4.8 74 263-343 23-96 (97)
2 d1seta1 a.2.7.1 (A:1-110) Sery 41.9 58 0.0042 23.6 10.2 81 238-320 7-87 (110)
3 d1uhka1 a.39.1.5 (A:3-189) Cal 37.4 31 0.0022 25.1 5.6 31 236-267 12-42 (187)
4 d2axtt1 f.23.34.1 (T:1-30) Pho 34.0 11 0.00077 24.3 2.1 16 8-23 8-23 (30)
5 d1fqia_ a.91.1.1 (A:) RGS9, RG 29.6 85 0.0062 22.9 7.1 73 234-341 61-133 (138)
6 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 28.7 22 0.0016 24.7 3.3 27 231-257 13-39 (77)
7 d1am9a_ a.38.1.1 (A:) SREBP-1a 28.3 68 0.005 22.3 6.0 15 236-250 19-33 (80)
8 d1qv0a_ a.39.1.5 (A:) Calcium- 28.0 77 0.0056 23.0 6.5 30 236-266 14-43 (189)
9 d2bnxa1 a.118.1.23 (A:133-475) 25.2 1E+02 0.0076 26.2 7.8 81 259-346 173-276 (343)
10 d1nkpa_ a.38.1.1 (A:) Myc prot 24.0 87 0.0064 21.9 6.0 45 236-280 19-71 (88)
11 d2jm5a1 a.91.1.1 (A:3-134) Reg 23.3 1.2E+02 0.0089 21.6 7.1 37 293-341 93-129 (132)
12 d1s35a1 a.7.1.1 (A:1063-1168) 21.3 1.1E+02 0.0081 20.4 10.2 70 252-321 27-96 (106)
13 d2fbha1 a.4.5.28 (A:8-144) Tra 20.5 1E+02 0.0075 21.9 5.8 53 223-276 85-137 (137)
No 1
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Probab=47.09 E-value=13 Score=27.01 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=47.4
Q ss_pred HHhHHHHHHHHhhhhhhhhhHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccCHHHHHHHHh
Q 014536 263 TKCLAQAREELEDKSETIKRKFSIQKALLSKADRSSIDRLRQQIYNLEKQQRRLEEDVYVYNWLQDQLRLSPACKKMFEV 342 (423)
Q Consensus 263 ~NcLVdARnEL~~KSE~iqRkftI~KALLskAdRSS~DRL~qQIykLE~EqkRLekDa~VYN~LQqQLKlSpAYKkMlE~ 342 (423)
...+|++||++..=-..+++...-.+..|+...+ .+|-+.|..|+.-.+ ..|...++...+.|+ .+..+++|.
T Consensus 23 ~r~~ie~rn~ae~~i~~~e~~l~e~~~~l~~~~k---~~i~~~i~~l~~~l~--~~d~~~i~~~~~~L~--~~~~~l~e~ 95 (97)
T d1dkza1 23 FEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDK---TAIESALTALETALK--GEDKAAIEAKMQELA--QVSQKLMEI 95 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHH---HHHHHHHHHHHHHHT--SSCHHHHHHHHHHHH--HHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHHH---HHHHHHHHHHHHHHh--cCCHHHHHHHHHHHH--HHHHHHHHh
Confidence 3568999999988777777777666666655444 345566666654443 347777777777765 344555555
Q ss_pred h
Q 014536 343 C 343 (423)
Q Consensus 343 g 343 (423)
+
T Consensus 96 a 96 (97)
T d1dkza1 96 A 96 (97)
T ss_dssp H
T ss_pred h
Confidence 4
No 2
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=41.92 E-value=58 Score=23.61 Aligned_cols=81 Identities=15% Similarity=0.218 Sum_probs=48.2
Q ss_pred HHHHHHHHHhhhccCcchHHHHHHHHHhHHHHHHHHhhhhhhhhhHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhh
Q 014536 238 IKELYHQLVQSCESNELTLAQVGEFTKCLAQAREELEDKSETIKRKFSIQKALLSKADRSSIDRLRQQIYNLEKQQRRLE 317 (423)
Q Consensus 238 IkeqYDELvran~aK~LTLaQV~eF~NcLVdARnEL~~KSE~iqRkftI~KALLskAdRSS~DRL~qQIykLE~EqkRLe 317 (423)
|.+-.+........+..++. |.+|+ .|-..|.+|+++.+.+|..-.....-..++.....+-|.+++..|-.+.+.|+
T Consensus 7 ir~n~e~v~~~l~~R~~~~~-ld~i~-~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le 84 (110)
T d1seta1 7 LRQEPEVFHRAIREKGVALD-LEALL-ALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLE 84 (110)
T ss_dssp HHHCHHHHHHHHHHTTCCCC-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHHcCCccC-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHH
Confidence 44444444444444555543 54444 57789999999999998876554444455555555555555555555555555
Q ss_pred hhH
Q 014536 318 EDV 320 (423)
Q Consensus 318 kDa 320 (423)
+..
T Consensus 85 ~~~ 87 (110)
T d1seta1 85 EAL 87 (110)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 3
>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}
Probab=37.36 E-value=31 Score=25.12 Aligned_cols=31 Identities=6% Similarity=0.210 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhhhccCcchHHHHHHHHHhHH
Q 014536 236 RKIKELYHQLVQSCESNELTLAQVGEFTKCLA 267 (423)
Q Consensus 236 RRIkeqYDELvran~aK~LTLaQV~eF~NcLV 267 (423)
+|+++.++ .+-.+....+|..++..++..++
T Consensus 12 ~~~k~~F~-~~D~d~dG~Is~~Ef~~~~~~~~ 42 (187)
T d1uhka1 12 GRHKHMFN-FLDVNHNGKISLDEMVYKASDIV 42 (187)
T ss_dssp HHHHHHHH-HHCTTCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHcCCCCCcCcHHHHHHHHHHHH
Confidence 68888888 55778899999999888776654
No 4
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=33.96 E-value=11 Score=24.31 Aligned_cols=16 Identities=38% Similarity=0.972 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHH
Q 014536 8 LFMLLVISFFFLTIFF 23 (423)
Q Consensus 8 ~~~~~~~~~~~~~~~~ 23 (423)
+....+|..||..|||
T Consensus 8 ~ifac~i~lfffaiff 23 (30)
T d2axtt1 8 FIFACIIALFFFAIFF 23 (30)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3444567777778887
No 5
>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=29.61 E-value=85 Score=22.93 Aligned_cols=73 Identities=21% Similarity=0.366 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHhhhccCcchHHHHHHHHHhHHHHHHHHhhhhhhhhhHHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Q 014536 234 TQRKIKELYHQLVQSCESNELTLAQVGEFTKCLAQAREELEDKSETIKRKFSIQKALLSKADRSSIDRLRQQIYNLEKQQ 313 (423)
Q Consensus 234 tQRRIkeqYDELvran~aK~LTLaQV~eF~NcLVdARnEL~~KSE~iqRkftI~KALLskAdRSS~DRL~qQIykLE~Eq 313 (423)
++-.....|+.-+.....+.+.+.. ..|+++.+. +.+++...|++....|+++
T Consensus 61 ~~~~a~~Iy~~yi~~~s~~~vni~~---------~~r~~i~~~--------------~~~~~~~~F~~aq~~V~~~---- 113 (138)
T d1fqia_ 61 VKEKAEEIYKLFLAPGARRWINIDG---------KTMDITVKG--------------LKHPHRYVLDAAQTHIYML---- 113 (138)
T ss_dssp HHHHHHHHHHHHTSTTCTTCCCCCH---------HHHHHHHHH--------------TTSCCTTTTHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHccccccccCCCH---------HHHHHHHHH--------------cCCCCHHHHHHHHHHHHHH----
Confidence 4555667777777666555555442 234444322 2456788999999999876
Q ss_pred HhhhhhHHHHHHHHHHhccCHHHHHHHH
Q 014536 314 RRLEEDVYVYNWLQDQLRLSPACKKMFE 341 (423)
Q Consensus 314 kRLekDa~VYN~LQqQLKlSpAYKkMlE 341 (423)
|++|. | .....|+.|++++.
T Consensus 114 --l~~~~--~----~~Fl~S~~y~~~l~ 133 (138)
T d1fqia_ 114 --MKKDS--Y----ARYLKSPIYKEMLA 133 (138)
T ss_dssp --HHHHT--H----HHHHTSHHHHHHHH
T ss_pred --HHHhH--H----HhHhcCHHHHHHHH
Confidence 44442 2 23456999999874
No 6
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.66 E-value=22 Score=24.66 Aligned_cols=27 Identities=15% Similarity=0.213 Sum_probs=21.2
Q ss_pred chhHHHHHHHHHHHHHhhhccCcchHH
Q 014536 231 GSATQRKIKELYHQLVQSCESNELTLA 257 (423)
Q Consensus 231 ~sAtQRRIkeqYDELvran~aK~LTLa 257 (423)
-.|++..|+++|..|+......+..-.
T Consensus 13 ~~as~~eIk~ay~~l~~~~hPD~~~~~ 39 (77)
T d1hdja_ 13 RGASDEEIKRAYRRQALRYHPDKNKEP 39 (77)
T ss_dssp TTCCHHHHHHHHHHHHHTTCTTTCCCT
T ss_pred CCcCHHHHHHHHHHHHHHhccccccch
Confidence 357888999999999998886655443
No 7
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.29 E-value=68 Score=22.35 Aligned_cols=15 Identities=13% Similarity=0.076 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhhhc
Q 014536 236 RKIKELYHQLVQSCE 250 (423)
Q Consensus 236 RRIkeqYDELvran~ 250 (423)
.+|++.|++|..+.-
T Consensus 19 ~~in~~~~~L~~llP 33 (80)
T d1am9a_ 19 SSINDKIIELKDLVV 33 (80)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCC
Confidence 468999999987764
No 8
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}
Probab=27.97 E-value=77 Score=23.03 Aligned_cols=30 Identities=10% Similarity=0.211 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhhhccCcchHHHHHHHHHhH
Q 014536 236 RKIKELYHQLVQSCESNELTLAQVGEFTKCL 266 (423)
Q Consensus 236 RRIkeqYDELvran~aK~LTLaQV~eF~NcL 266 (423)
+|+++.|+ ++-.+....+|+.++..++...
T Consensus 14 ~r~k~~F~-~~D~d~dG~I~~~E~~~~~~~~ 43 (189)
T d1qv0a_ 14 KRHKHMFD-FLDINGNGKITLDEIVSKASDD 43 (189)
T ss_dssp HHHHHHHH-HHCTTCSSCBCHHHHHHHHHHT
T ss_pred HHHHHHHH-HHcCCCCCcCcHHHHHHHHHHH
Confidence 48999995 5778889999999887766543
No 9
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.22 E-value=1e+02 Score=26.24 Aligned_cols=81 Identities=12% Similarity=0.231 Sum_probs=49.2
Q ss_pred HHHHHHhHHHHHHHHhhhhhhhhhHHHHHHHH--------hhcCCcchHHHHHHHHHHHHHHHHh---------------
Q 014536 259 VGEFTKCLAQAREELEDKSETIKRKFSIQKAL--------LSKADRSSIDRLRQQIYNLEKQQRR--------------- 315 (423)
Q Consensus 259 V~eF~NcLVdARnEL~~KSE~iqRkftI~KAL--------LskAdRSS~DRL~qQIykLE~EqkR--------------- 315 (423)
.-.|+|+||.. .+.++-+..|+..| +.+-+....+.|..||.+-+.+...
T Consensus 173 ~m~lIN~li~~-------~~dl~~R~~lR~E~~~~Gl~~il~~l~~~~~~~L~~Qi~~f~~~~~~D~~el~~~~~~~~~d 245 (343)
T d2bnxa1 173 CLQLINALITP-------AEELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDEDFFDLKGRLDDIRME 245 (343)
T ss_dssp HHHHHHHHHTT-------CSCHHHHHHHHHHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-------cccHHHHHHHHHHHHHCChHHHHHHHHccCChHHHHHHHHHHHHHHhHHHHHHhcccccccc
Confidence 45688999853 22333333333322 2222334567888998888643211
Q ss_pred hhhhHHHHHHHHHHhccCHHHHHHHHhhhhh
Q 014536 316 LEEDVYVYNWLQDQLRLSPACKKMFEVCADM 346 (423)
Q Consensus 316 LekDa~VYN~LQqQLKlSpAYKkMlE~ga~~ 346 (423)
+..-.++|+-|.++.+-||++.-++-+=+..
T Consensus 246 ~~~~~~~~~~l~~~~~~t~~e~~flSilQhL 276 (343)
T d2bnxa1 246 MDDFGEVFQIILNTVKDSKAEPHFLSILQHL 276 (343)
T ss_dssp CCCHHHHHHHHHHHHTTSTHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 1112468999999999999998777766554
No 10
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.04 E-value=87 Score=21.91 Aligned_cols=45 Identities=9% Similarity=0.239 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhhhc----cCcc----hHHHHHHHHHhHHHHHHHHhhhhhhh
Q 014536 236 RKIKELYHQLVQSCE----SNEL----TLAQVGEFTKCLAQAREELEDKSETI 280 (423)
Q Consensus 236 RRIkeqYDELvran~----aK~L----TLaQV~eF~NcLVdARnEL~~KSE~i 280 (423)
.+|++.|++|-.+.- ..+. .|.+..+++..|-..-.+|..+-+.+
T Consensus 19 ~~in~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l 71 (88)
T d1nkpa_ 19 NELKRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLL 71 (88)
T ss_dssp HHHHHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999987632 2333 34445566666655544544443333
No 11
>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.33 E-value=1.2e+02 Score=21.61 Aligned_cols=37 Identities=24% Similarity=0.449 Sum_probs=26.2
Q ss_pred cCCcchHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccCHHHHHHHH
Q 014536 293 KADRSSIDRLRQQIYNLEKQQRRLEEDVYVYNWLQDQLRLSPACKKMFE 341 (423)
Q Consensus 293 kAdRSS~DRL~qQIykLE~EqkRLekDa~VYN~LQqQLKlSpAYKkMlE 341 (423)
++...-||...++|+++ |+.|. | .....|+.|+.+++
T Consensus 93 ~~~~~~F~~aq~~V~~~------l~~~~--y----p~Fl~S~~y~~ll~ 129 (132)
T d2jm5a1 93 QPTLHSFDAAQSRVYQL------MEQDS--Y----TRFLKSDIYLDLME 129 (132)
T ss_dssp SCCTTTTHHHHHHHHHH------HHHHH--H----HHHHTSHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHH------HHhhh--h----hhhccCHHHHHHHc
Confidence 45667899999998866 44442 2 34567999999875
No 12
>d1s35a1 a.7.1.1 (A:1063-1168) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.30 E-value=1.1e+02 Score=20.38 Aligned_cols=70 Identities=11% Similarity=0.107 Sum_probs=54.2
Q ss_pred CcchHHHHHHHHHhHHHHHHHHhhhhhhhhhHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHhhhhhHH
Q 014536 252 NELTLAQVGEFTKCLAQAREELEDKSETIKRKFSIQKALLSKADRSSIDRLRQQIYNLEKQQRRLEEDVY 321 (423)
Q Consensus 252 K~LTLaQV~eF~NcLVdARnEL~~KSE~iqRkftI~KALLskAdRSS~DRL~qQIykLE~EqkRLekDa~ 321 (423)
.+-++..|.....-.-+-..++..+.+.+..-.....+|+.....+.-+.|.+++..|......|..-+.
T Consensus 27 ~~~d~~~~~~~l~~h~~l~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~I~~~l~~L~~~w~~L~~~~~ 96 (106)
T d1s35a1 27 MPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRLEGLDTGWDALGRMWE 96 (106)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447777777777666777788888888888888889998876666677888899999888887766544
No 13
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.51 E-value=1e+02 Score=21.86 Aligned_cols=53 Identities=11% Similarity=0.092 Sum_probs=42.9
Q ss_pred CCCcccccchhHHHHHHHHHHHHHhhhccCcchHHHHHHHHHhHHHHHHHHhhh
Q 014536 223 CLCPLTSMGSATQRKIKELYHQLVQSCESNELTLAQVGEFTKCLAQAREELEDK 276 (423)
Q Consensus 223 c~yPfTSs~sAtQRRIkeqYDELvran~aK~LTLaQV~eF~NcLVdARnEL~~K 276 (423)
...=+|.-+.++-.++.+.+..+....-+ .++-.++..|.+.|-..+..|.+|
T Consensus 85 ~~i~lT~~G~~~~~~~~~~~~~~~~~~~~-~l~~~e~~~l~~~l~~l~~~l~~r 137 (137)
T d2fbha1 85 KHIVLTPKADVLIADIEAIAASVRNDVLT-GIDESEQALCQQVLLRILANLENR 137 (137)
T ss_dssp CEEEECTTHHHHHHHHHHHHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHHHHHhCc
Confidence 34557777888888888888887766544 699999999999999888888765
Done!