Query 014537
Match_columns 423
No_of_seqs 210 out of 1761
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 13:22:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014537.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014537hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 4.5E-61 1.6E-65 469.9 26.2 300 81-419 48-370 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 1.6E-60 5.3E-65 467.0 23.3 300 81-419 53-383 (383)
3 3vla_A EDGP; extracellular, in 100.0 8.7E-59 3E-63 459.3 28.6 318 86-419 17-399 (413)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-58 5.9E-63 449.5 29.0 301 85-422 19-345 (351)
5 2apr_A Rhizopuspepsin; hydrola 100.0 3.1E-58 1.1E-62 443.0 30.0 302 80-419 6-324 (325)
6 3cms_A Chymosin B; hydrolase, 100.0 1.1E-58 3.8E-63 445.9 24.3 300 82-419 7-323 (323)
7 1am5_A Pepsin, acid proteinase 100.0 2.9E-58 1E-62 443.3 26.3 297 84-419 7-324 (324)
8 1dpj_A Proteinase A; proteinas 100.0 4E-58 1.4E-62 443.3 26.8 298 83-419 7-329 (329)
9 3c9x_A Trichoderma reesei aspa 100.0 3.8E-58 1.3E-62 443.1 25.8 302 84-418 10-329 (329)
10 4aa9_A Chymosin; hydrolase, as 100.0 2.2E-58 7.5E-63 443.6 23.8 300 82-419 4-320 (320)
11 1mpp_A Pepsin; hydrolase(acid 100.0 9.4E-58 3.2E-62 446.2 28.1 304 84-422 13-358 (361)
12 1j71_A Candidapepsin, aspartic 100.0 1.1E-57 3.9E-62 440.9 27.7 298 81-422 4-327 (334)
13 1oew_A Endothiapepsin; hydrola 100.0 6.3E-58 2.2E-62 441.6 25.6 301 84-418 10-329 (329)
14 2qzx_A Candidapepsin-5; aspart 100.0 1.4E-57 4.9E-62 441.7 27.5 300 81-422 4-334 (342)
15 1htr_B Gastricsin; aspartyl pr 100.0 8.2E-58 2.8E-62 441.1 25.6 296 86-419 9-329 (329)
16 1qdm_A Prophytepsin; aspartic 100.0 6.6E-57 2.3E-61 452.8 30.0 305 82-419 45-478 (478)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 9.3E-57 3.2E-61 445.1 30.4 322 85-422 17-396 (403)
18 3pvk_A Candidapepsin-2; hydrol 100.0 5.1E-57 1.8E-61 438.1 27.5 301 81-422 4-334 (342)
19 1miq_A Plasmepsin; aspartic pr 100.0 3.7E-57 1.3E-61 443.0 26.2 294 85-419 58-374 (375)
20 2bju_A Plasmepsin II; aspartic 100.0 2.2E-57 7.6E-62 451.7 24.8 295 84-419 133-450 (453)
21 3k1w_A Renin; protease, altern 100.0 1.6E-57 5.6E-62 441.4 23.2 300 81-419 10-340 (341)
22 3fv3_A SAPP1P-secreted asparti 100.0 1.5E-56 5.3E-61 434.1 29.7 299 81-422 4-332 (339)
23 3qvc_A Histo-aspartic protease 100.0 5.6E-57 1.9E-61 449.4 24.2 298 81-419 129-449 (451)
24 1yg9_A Aspartic protease BLA G 100.0 1.2E-56 4.1E-61 432.8 25.7 297 83-419 11-329 (330)
25 1ibq_A Aspergillopepsin; aspar 100.0 3.3E-56 1.1E-60 428.9 26.6 300 83-419 8-325 (325)
26 1izd_A Aspartic proteinase; su 100.0 2.8E-56 9.6E-61 428.9 24.4 298 84-419 10-323 (323)
27 1bxo_A Protein (penicillopepsi 100.0 5E-56 1.7E-60 427.3 21.2 298 83-419 9-323 (323)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.3E-53 4.4E-58 420.3 31.2 303 86-422 10-358 (383)
29 3lpj_A Beta-secretase 1; alzhe 100.0 1.1E-53 3.7E-58 429.4 30.1 304 86-422 71-423 (455)
30 2qp8_A Beta-secretase 1; BACE1 100.0 2E-53 6.9E-58 420.4 29.4 301 86-422 18-370 (395)
31 3vf3_A Beta-secretase 1; struc 100.0 5E-53 1.7E-57 418.7 28.8 303 87-422 26-377 (402)
32 1wkr_A Polyporopepsin; hydrola 100.0 3.9E-53 1.3E-57 410.3 27.1 291 82-422 5-336 (340)
33 1t6e_X Xylanase inhibitor; two 100.0 1.8E-52 6.2E-57 411.4 29.6 311 85-420 10-374 (381)
34 1b5f_A Protein (cardosin A); h 100.0 6.5E-43 2.2E-47 321.3 15.9 216 82-326 6-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.7E-37 5.7E-42 286.0 20.0 213 197-419 3-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 9.5E-24 3.2E-28 164.5 8.1 88 83-191 7-96 (97)
37 1b5f_B Protein (cardosin A); h 99.7 7.3E-18 2.5E-22 128.9 8.4 78 338-419 3-87 (87)
38 3s8i_A Protein DDI1 homolog 1; 94.5 0.05 1.7E-06 44.8 5.4 104 287-418 29-135 (148)
39 2i1a_A DNA damage-inducible pr 94.3 0.098 3.3E-06 42.9 6.7 100 287-416 31-134 (148)
40 2hs1_A HIV-1 protease; ultra-h 88.4 0.57 2E-05 35.4 4.5 30 91-122 9-38 (99)
41 1fmb_A EIAV protease; hydrolas 87.7 0.53 1.8E-05 36.0 4.0 26 91-118 9-34 (104)
42 3ec0_A Protease; HIV-2, inhibi 86.4 0.89 3E-05 34.3 4.5 30 91-122 9-38 (99)
43 3liy_A Protease; hydrolase, hy 84.9 0.79 2.7E-05 35.3 3.6 33 91-123 11-46 (116)
44 2i1a_A DNA damage-inducible pr 81.7 1.4 4.9E-05 35.7 4.3 31 87-119 23-53 (148)
45 2hah_A Protease, retropepsin; 81.3 1.4 4.7E-05 34.3 3.8 28 90-120 14-41 (116)
46 3sqf_A Protease; folded monome 78.5 2.1 7.3E-05 33.0 4.0 30 91-122 10-39 (114)
47 3s8i_A Protein DDI1 homolog 1; 75.3 2.5 8.5E-05 34.5 3.9 31 88-120 22-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 70.1 5.4 0.00018 31.7 4.5 29 90-120 22-50 (132)
49 2rsp_A RSV protease; hydrolase 67.0 5.9 0.0002 31.1 4.1 24 97-122 27-50 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 65.7 5.2 0.00018 34.3 3.8 28 91-120 9-36 (203)
51 3ka2_A [L-Ala51;Gly51']HIV-1 p 45.3 24 0.00082 30.1 4.6 29 90-120 112-140 (203)
52 1ibq_A Aspergillopepsin; aspar 28.6 68 0.0023 29.3 5.2 41 268-317 5-45 (325)
53 3c9x_A Trichoderma reesei aspa 26.7 62 0.0021 29.6 4.6 35 87-121 191-231 (329)
54 1bxo_A Protein (penicillopepsi 25.2 64 0.0022 29.4 4.4 35 87-121 187-225 (323)
55 1izd_A Aspartic proteinase; su 24.7 76 0.0026 28.9 4.8 41 268-317 6-46 (323)
56 1oew_A Endothiapepsin; hydrola 23.2 73 0.0025 29.1 4.4 35 87-121 190-230 (329)
57 2apr_A Rhizopuspepsin; hydrola 21.8 80 0.0027 28.8 4.3 33 88-120 192-229 (325)
58 1b5f_A Protein (cardosin A); h 21.7 86 0.003 27.1 4.3 32 89-120 188-227 (239)
59 1t6e_X Xylanase inhibitor; two 21.3 66 0.0023 30.1 3.7 33 271-314 5-39 (381)
60 1lya_B Cathepsin D; lysosomal 20.8 81 0.0028 27.2 4.0 33 89-121 99-138 (241)
61 3k1w_A Renin; protease, altern 20.3 64 0.0022 29.6 3.3 44 267-316 6-50 (341)
62 1mpp_A Pepsin; hydrolase(acid 20.0 1.2E+02 0.004 28.1 5.1 42 268-315 7-49 (361)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.5e-61 Score=469.88 Aligned_cols=300 Identities=24% Similarity=0.441 Sum_probs=254.9
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 160 (423)
.+..++.+.+|+++|+||||||+|.|++||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~~C--~~~~~y~~~~SsT~~~~~------------- 112 (370)
T 3psg_A 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLAC--SDHNQFNPDDSSTFEATS------------- 112 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCccc--CCCCCCCCccCcCcEECC-------------
Confidence 44556789999999999999999999999999999999999984456 678999999999999987
Q ss_pred CCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc--------
Q 014537 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS-------- 230 (423)
Q Consensus 161 c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s-------- 230 (423)
+.|.+.|++|+. .|.+++|+|+|++. .++++.||++....+. | ...+|||||||++.++
T Consensus 113 -----~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~ 181 (370)
T 3psg_A 113 -----QELSITYGTGSM-TGILGYDTVQVGGI-----SDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVF 181 (370)
T ss_dssp -----EEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHH
T ss_pred -----cEEEEEeCCceE-EEEEEEEEEeeCCc-----ccCCeEEEEEEeecccccccCCccceeccCCccccccCCCCHH
Confidence 999999999985 59999999999987 9999999999988763 4 5778999999998765
Q ss_pred --hhhhhhhcccCceEEEeccCC--CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec-cCCCcEEE
Q 014537 231 --LISQMRTTIAGKFSYCLVPVS--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVI 303 (423)
Q Consensus 231 --l~~ql~~i~~~~Fs~~l~~~~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~ii 303 (423)
+++| +.+.+++||+||.+.. .|.|+||| ..++.|+ ++|+|+. ...+|.|+|++|+|+++.+. ...+.+||
T Consensus 182 ~~l~~q-g~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~-l~~~pv~-~~~~w~v~l~~i~v~g~~~~~~~~~~aii 258 (370)
T 3psg_A 182 DNLWDQ-GLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGS-LNWVPVS-VEGYWQITLDSITMDGETIACSGGCQAIV 258 (370)
T ss_dssp HHHHHT-TCSSSSEEEEEEC-----CEEEEETCCCGGGBSSC-CEEEECS-EETTEEEEECEEESSSSEEECTTCEEEEE
T ss_pred HHHHHC-CCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCc-ceeeccc-ccceeEEEEeEEEECCEEEecCCCceEEE
Confidence 3344 5678899999999863 29999999 4566665 9999999 77899999999999998763 35679999
Q ss_pred ecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE
Q 014537 304 DSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV 383 (423)
Q Consensus 304 DsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~ 383 (423)
||||+++++|.+++++|.+++.+.. ...+.+.+ +|+... .+|+|+|+|+|++|+|++++|+++ .++.|++
T Consensus 259 DTGTs~~~lP~~~~~~i~~~i~a~~----~~~g~~~v-~C~~~~---~lP~i~f~~~g~~~~l~~~~yi~~--~~~~C~~ 328 (370)
T 3psg_A 259 DTGTSLLTGPTSAIANIQSDIGASE----NSDGEMVI-SCSSID---SLPDIVFTIDGVQYPLSPSAYILQ--DDDSCTS 328 (370)
T ss_dssp CTTCCSEEEEHHHHHHHHHHTTCEE----CTTCCEEC-CGGGGG---GCCCEEEEETTEEEEECHHHHEEE--CSSCEEE
T ss_pred cCCCCcEECCHHHHHHHHHHhCCcc----cCCCcEEE-ECCCcc---cCCcEEEEECCEEEEECHHHhccc--CCCEEEE
Confidence 9999999999999999988886542 22344545 498764 689999999999999999999998 3346997
Q ss_pred -EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 384 -FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 384 -i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|...+ +..||||++|||++|+|||++++|||||+++
T Consensus 329 ~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 329 GFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp SEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 77643 2369999999999999999999999999985
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.6e-60 Score=466.99 Aligned_cols=300 Identities=21% Similarity=0.348 Sum_probs=256.2
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCCccccCCCC
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~--~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 158 (423)
.+..++.+.+|+++|.||||||+|.|+|||||+++||+|..|.. ..|. .|+.|||++|+||+...
T Consensus 53 ~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~--~~~~y~~~~SsT~~~~~----------- 119 (383)
T 2x0b_A 53 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACV--YHKLFDASDSSSYKHNG----------- 119 (383)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHH--TSCCBCGGGCTTCEEEE-----------
T ss_pred EeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCccccc--CCCCCCCCCCCcEEECC-----------
Confidence 34445688999999999999999999999999999999999963 3684 57899999999999987
Q ss_pred CCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCC-CC-CCCcceeeecCCCCCc------
Q 014537 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------ 230 (423)
Q Consensus 159 ~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------ 230 (423)
|.|.+.|++|+. .|.+++|+|+|++. .++ +.|||+....+ .| ...+|||||||++.++
T Consensus 120 -------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~ 185 (383)
T 2x0b_A 120 -------TELTLRYSTGTV-SGFLSQDIITVGGI-----TVT-QMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 185 (383)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEETTE-----EEE-EEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------cEEEEEcCCccE-EEEEEeeEEEEcCc-----eEE-EEEEEEEecCCcccccCCCceEeccCCCccccCCCCc
Confidence 999999999985 59999999999987 888 99999998765 23 4788999999998775
Q ss_pred ----hhhhhhhcccCceEEEeccCC------CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEe-ccC
Q 014537 231 ----LISQMRTTIAGKFSYCLVPVS------STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVS 297 (423)
Q Consensus 231 ----l~~ql~~i~~~~Fs~~l~~~~------~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~ 297 (423)
+++| +.+.+++||+||.+.. .|+|+||| ..++.|+ ++|+|+. .+++|.|+|++|+|+++.+ ...
T Consensus 186 ~~~~l~~q-g~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~-l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~ 262 (383)
T 2x0b_A 186 IFDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLI-KTGVWQIQMKGVSVGSSTLLCED 262 (383)
T ss_dssp HHHHHHTT-TCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEE-EEEEEBS-STTSCEEEECEEEESSCCCBSTT
T ss_pred HHHHHHhC-CCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCc-eEEEEcC-CCceEEEEEeEEEeCCceEEcCC
Confidence 3445 6678899999998862 49999999 3456664 9999999 7899999999999999874 345
Q ss_pred CCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC
Q 014537 298 TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE 377 (423)
Q Consensus 298 ~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~ 377 (423)
.+.+|+||||+++++|.+++++|.+++.+.. ..+.+.++ |+... .+|+|+|+|+|++|+|++++|+++...
T Consensus 263 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~-C~~~~---~~P~i~f~~~g~~~~l~~~~yi~~~~~ 333 (383)
T 2x0b_A 263 GCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVK-CNEGP---TLPDISFHLGGKEYTLTSADYVFQESY 333 (383)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEE-GGGTT---TCCCEEEEETTEEEEECHHHHBCCCCC
T ss_pred CcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEe-ccccc---cCceEEEEECCEEEEECHHHhEeeccC
Confidence 6789999999999999999999999986542 24455554 99765 689999999999999999999987653
Q ss_pred --CeEEEE-EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 378 --DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 378 --~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
+..|++ |...+ ...||||++|||++|+|||++++|||||+++
T Consensus 334 ~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 334 SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 458996 87642 4689999999999999999999999999974
No 3
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=8.7e-59 Score=459.31 Aligned_cols=318 Identities=23% Similarity=0.402 Sum_probs=261.4
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCC-------
Q 014537 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ------- 158 (423)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~------- 158 (423)
..+++|+++|.||||||+|.|+|||||+++||+|.+| .+|+||+.++|.++.|.....
T Consensus 17 ~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---------------~~Sst~~~v~C~s~~C~~~~~~~~~~c~ 81 (413)
T 3vla_A 17 ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---------------YVSSTYRPVRCRTSQCSLSGSIACGDCF 81 (413)
T ss_dssp TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---------------CCCTTCEECBTTSHHHHHTTCCEEECCS
T ss_pred CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---------------CCCCCcCccCCCcccccccccCCCcccc
Confidence 4578999999999999999999999999999998855 379999999999999986542
Q ss_pred ----CCCCCCCceeeEEc-CCCCeeeEEEEEEEEEecCCCCC----ceecCceEEEeEEecCC-CCCCCcceeeecCCCC
Q 014537 159 ----KSCSGVNCQYSVSY-GDGSFSNGNLATETVTLGSTTGQ----AVALPGITFGCGTNNGG-LFNSKTTGIVGLGGGD 228 (423)
Q Consensus 159 ----~~c~~~~~~~~~~Y-g~g~~~~G~~~~D~v~ig~~~~~----~~~~~~~~fg~~~~~~~-~~~~~~~GilGLg~~~ 228 (423)
..|..+.|.|.+.| ++|+...|++++|+|+|+..+|. .+.++++.|||+..... .+...+|||||||++.
T Consensus 82 s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~ 161 (413)
T 3vla_A 82 NGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTR 161 (413)
T ss_dssp SCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSS
T ss_pred cCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCC
Confidence 24555579999999 48888889999999999865443 36889999999998632 1236789999999999
Q ss_pred Cchhhhhhhc--ccCceEEEeccCCC--ceeeeCCCCc-------cCCCCeEEeecc-CC------------CCceEEEe
Q 014537 229 ISLISQMRTT--IAGKFSYCLVPVSS--TKINFGTNGI-------VSGPGVVSTPLT-KA------------KTFYVLTI 284 (423)
Q Consensus 229 ~sl~~ql~~i--~~~~Fs~~l~~~~~--g~l~fGg~~~-------~~g~~~~~~p~~-~~------------~~~w~v~l 284 (423)
+|+..||... .+++||+||.+... |.|+||+.+. +.++.+.|+|++ +. ..+|.|+|
T Consensus 162 lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l 241 (413)
T 3vla_A 162 IALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241 (413)
T ss_dssp SSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEECC
T ss_pred cchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEEE
Confidence 9999998642 26999999998432 9999999432 344449999999 31 17999999
Q ss_pred EEEEeccEEecc----------CCCcEEEecCCcceecChhHHHHHHHHHHhhhc---cCcCCCCCCCcccccccCCC--
Q 014537 285 DAISVGNQRLGV----------STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIE---AQPVADPTGSLELCYSFNSL-- 349 (423)
Q Consensus 285 ~~i~v~~~~~~~----------~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~C~~~~~~-- 349 (423)
++|+||++.+.. +.+++||||||++++||+++|++|.++|.+++. ..+. .....+..|+..+..
T Consensus 242 ~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~-~~~~~~~~C~~~~~~~~ 320 (413)
T 3vla_A 242 KSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV-ASVAPFGACFSTDNILS 320 (413)
T ss_dssp CEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE-CCCTTCSCEEECTTCCE
T ss_pred EEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC-CCCCCCcceeccCCccc
Confidence 999999998731 357899999999999999999999999998764 1222 223345679987543
Q ss_pred ----CCCCeEEEEEeC--cEEEeCCCceEEEeCCCeEEEEEEecC---CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 350 ----SQVPEVTIHFRG--ADVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 350 ----~~~P~i~~~f~g--~~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
..+|+|+|+|+| ++|+|++++|+++..++..|++|...+ ...||||+.|||++|+|||++++|||||++.
T Consensus 321 ~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~ 399 (413)
T 3vla_A 321 TRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTL 399 (413)
T ss_dssp ETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEG
T ss_pred cccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEec
Confidence 268999999998 899999999999876678999977653 2689999999999999999999999999854
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-58 Score=449.50 Aligned_cols=301 Identities=25% Similarity=0.439 Sum_probs=253.4
Q ss_pred ecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 014537 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (423)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~ 164 (423)
+..+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 19 n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 79 (351)
T 1tzs_A 19 NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPAC--KTHSRFQPSQSSTYSQPG----------------- 79 (351)
T ss_dssp GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGG--TTSCCBCGGGCTTCBCCS-----------------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccc--CCCCcCCcccCcceEECC-----------------
Confidence 4567899999999999999999999999999999999985578 467899999999999987
Q ss_pred CceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc------hhhhh-
Q 014537 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM- 235 (423)
Q Consensus 165 ~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------l~~ql- 235 (423)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||+....+. | ....+||||||++.++ ++.+|
T Consensus 80 -~~~~i~Yg~Gs~-~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~ 152 (351)
T 1tzs_A 80 -QSFSIQYGTGSL-SGIIGADQVSVEGL-----TVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMM 152 (351)
T ss_dssp -CEEEEESSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHH
T ss_pred -CEEEEEeCCCCe-EEEEEEeEEEECCe-----EECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHH
Confidence 999999999984 59999999999986 8999999999987653 3 4678999999998765 33333
Q ss_pred --hhcccCceEEEeccCC----CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEe-ccCCCcEEEecC
Q 014537 236 --RTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVSTPDIVIDSG 306 (423)
Q Consensus 236 --~~i~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~iiDsG 306 (423)
+.+..++||+||.+.. .|.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+ ......+|||||
T Consensus 153 ~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSG 230 (351)
T 1tzs_A 153 AQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGS-LNWVPVT-KQAYWQIALDNIQVGGTVMFCSEGCQAIVDTG 230 (351)
T ss_dssp HTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSC-CEEEECS-EETTEEEEEEEEEETTEEEECTTCEEEEECTT
T ss_pred HCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCc-eEEEecC-CCceEEEEeCEEEECCceEEcCCCceEEeccC
Confidence 5578899999998863 39999999 3456665 9999999 7789999999999999885 345678999999
Q ss_pred CcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-
Q 014537 307 TTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV- 383 (423)
Q Consensus 307 t~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~- 383 (423)
|+++++|.+++++|.+++.+... . +.+.+ +|+... .+|+|+|+|+|++|+|++++|+++... +..|++
T Consensus 231 Ts~~~lP~~~~~~l~~~~~~~~~----~-g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~ 301 (351)
T 1tzs_A 231 TSLITGPSDKIKQLQNAIGAAPV----D-GEYAV-ECANLN---VMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSG 301 (351)
T ss_dssp CSSEEECHHHHHHHHHHHTCEEC----S-SSEEE-CGGGGG---GSCCEEEEETTEEEEECTTTSEECC-----CCEEES
T ss_pred CcceeCCHHHHHHHHHHhCCccc----C-CeEEE-eCCCCc---cCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEE
Confidence 99999999999999998865421 1 33444 598754 689999999999999999999987642 458997
Q ss_pred EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 384 FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 384 i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
|.+.+ ...||||++|||++|+|||++++|||||+++|..
T Consensus 302 ~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 302 FQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp EEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred EEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 87642 4689999999999999999999999999999964
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.1e-58 Score=443.01 Aligned_cols=302 Identities=24% Similarity=0.382 Sum_probs=256.3
Q ss_pred ccceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCC
Q 014537 80 SQADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQK 159 (423)
Q Consensus 80 ~~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~ 159 (423)
+.......+.+|+++|.||||+|++.|+|||||+++||+|.+|. .| .+.++.|||++|+||+...
T Consensus 6 v~~~~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~c-~~~~~~y~~~~SsT~~~~~------------ 70 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT--NC-GSGQTKYDPNQSSTYQADG------------ 70 (325)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS--SC-CTTSCCBCGGGCTTCEEEE------------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCc--hH-hcCCCCCCcccCCCeeeCC------------
Confidence 34455778899999999999999999999999999999999998 77 5778999999999999865
Q ss_pred CCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC-CCCcceeeecCCCCCc-------h
Q 014537 160 SCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------L 231 (423)
Q Consensus 160 ~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------l 231 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+...+..| ....+||||||++..+ +
T Consensus 71 ------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~ 139 (325)
T 2apr_A 71 ------RTWSISYGDGSSASGILAKDNVNLGGL-----LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP 139 (325)
T ss_dssp ------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred ------CEEEEEECCCCCEEEEEEEEEEEECCE-----EECcEEEEEEeccCcccccCCCceEEEeCCcccccccCCCCH
Confidence 999999999997789999999999987 89999999999876655 4568999999998654 4
Q ss_pred hhhh---hhcccCceEEEeccC---CCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEE
Q 014537 232 ISQM---RTTIAGKFSYCLVPV---SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVI 303 (423)
Q Consensus 232 ~~ql---~~i~~~~Fs~~l~~~---~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ii 303 (423)
+++| +.+..++||+||.+. ..|.|+||| .+++.|+ +.|+|+.+..++|.|+|++|+|+++ +......+||
T Consensus 140 ~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~vg~~-~~~~~~~~ii 217 (325)
T 2apr_A 140 MDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGS-LTTVPIDNSRGWWGITVDRATVGTS-TVASSFDGIL 217 (325)
T ss_dssp HHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSC-CEEEECBCTTSSCEEEECEEEETTE-EEECCEEEEE
T ss_pred HHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCc-eEEEEccCCCCEEEEEEeEEEECCE-ecCCCceEEE
Confidence 4444 346789999999653 239999999 3466665 9999997346899999999999994 4456779999
Q ss_pred ecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE
Q 014537 304 DSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV 383 (423)
Q Consensus 304 DsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~ 383 (423)
||||+++++|+++|+++++++.+.+... +.+.+ +|+.. .+|+|+|+|+|.+++||+++|+++.. +..|++
T Consensus 218 DSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~-~C~~~----~~p~i~f~f~g~~~~ip~~~~~~~~~-~~~C~~ 287 (325)
T 2apr_A 218 DTGTTLLILPNNIAASVARAYGASDNGD----GTYTI-SCDTS----AFKPLVFSINGASFQVSPDSLVFEEF-QGQCIA 287 (325)
T ss_dssp CTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEE-CSCGG----GCCCEEEEETTEEEEECGGGGEEEEE-TTEEEE
T ss_pred ecCCccEECCHHHHHHHHHHHhcccCCC----CeEEE-ECCCC----CCCcEEEEECCEEEEECHHHEEEcCC-CCeEEE
Confidence 9999999999999999999997765422 33434 48841 48999999999999999999988754 568998
Q ss_pred -EEecCCCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 384 -FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 384 -i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|...+.+.||||++|||++|+|||++++|||||+++
T Consensus 288 ~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 288 GFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp SEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 776556789999999999999999999999999975
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-58 Score=445.88 Aligned_cols=300 Identities=22% Similarity=0.377 Sum_probs=253.8
Q ss_pred ceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 014537 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (423)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c 161 (423)
+..+..+.+|+++|.||||+|++.|++||||+++||+|..|....|. .++.|||++|+||+...
T Consensus 7 ~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~-------------- 70 (323)
T 3cms_A 7 PLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACK--NHQRFDPRKSSTFQNLG-------------- 70 (323)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE--------------
T ss_pred eeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCccccc--CCCCCCCccCCCeEECC--------------
Confidence 34456789999999999999999999999999999999999644784 67899999999999987
Q ss_pred CCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCC-CC-CCCcceeeecCCCCCc------hhh
Q 014537 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LIS 233 (423)
Q Consensus 162 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------l~~ 233 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ .| ....+||||||++..+ +++
T Consensus 71 ----~~~~i~Yg~Gs-~~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 140 (323)
T 3cms_A 71 ----KPLSIHYGTGS-MQGILGYDTVTVSNI-----VDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFD 140 (323)
T ss_dssp ----EEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHH
T ss_pred ----cEEEEEeCCCC-eEEEEEEEEEEECCe-----EEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHH
Confidence 99999999998 459999999999986 899999999998765 33 4678999999998664 223
Q ss_pred hh---hhcccCceEEEeccCCC-ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec-cCCCcEEEecC
Q 014537 234 QM---RTTIAGKFSYCLVPVSS-TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVIDSG 306 (423)
Q Consensus 234 ql---~~i~~~~Fs~~l~~~~~-g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~iiDsG 306 (423)
+| +.+..++||+||.+... |.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+. .....+|||||
T Consensus 141 ~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSG 218 (323)
T 3cms_A 141 NMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGS-LHWVPVT-VQQYWQFTVDSVTISGVVVACEGGCQAILDTG 218 (323)
T ss_dssp HHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEE-EEEEECS-SBTTBEEEEEEEEETTEEEESTTCEEEEECTT
T ss_pred HHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCc-eEEEECc-cCCeEEEEEeeEEECCEEeecCCCcEEEEecC
Confidence 33 55778999999988743 9999999 3456664 9999999 77899999999999998873 45678999999
Q ss_pred CcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE-EE
Q 014537 307 TTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FK 385 (423)
Q Consensus 307 t~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~-i~ 385 (423)
|+++++|++++++|.+++.+... ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++ ++..|++ |+
T Consensus 219 Tt~~~lP~~~~~~l~~~~~~~~~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~--~~~~C~~~i~ 288 (323)
T 3cms_A 219 TSKLVGPSSDILNIQQAIGATQN----QYGEFDI-DCDNLS---YMPTVVFEINGKMYPLTPSAYTSQ--DQGFCTSGFQ 288 (323)
T ss_dssp CCSEEECHHHHHHHHHHHTCEEE----TTTEEEE-CTTCTT---TSCCEEEEETTEEEEECHHHHEEE--ETTEEEESEE
T ss_pred CccEeCCHHHHHHHHHHhCCeec----CCCcEEE-ECCCCc---cCceEEEEECCEEEEECHHHhccC--CCCEEEEEEE
Confidence 99999999999999999865321 1233434 498654 689999999999999999999998 3568997 88
Q ss_pred ecC-CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 386 GIT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 386 ~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
+.+ ...||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 289 SENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 764 5789999999999999999999999999975
No 7
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-58 Score=443.30 Aligned_cols=297 Identities=25% Similarity=0.438 Sum_probs=253.8
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~ 163 (423)
.+..+.+|+++|.||||||++.|++||||+++||+|..|....|. .++.|||++|+||+...
T Consensus 7 ~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~---------------- 68 (324)
T 1am5_A 7 KNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACS--NHNKFKPRQSSTYVETG---------------- 68 (324)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHH--TSCCBCGGGCTTCEEEE----------------
T ss_pred ecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccc--CCCcCCCccCCCeEeCC----------------
Confidence 345788999999999999999999999999999999999844674 57899999999999987
Q ss_pred CCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc------hhhhh
Q 014537 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM 235 (423)
Q Consensus 164 ~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------l~~ql 235 (423)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||+....+. | ....+||||||++..+ ++.+|
T Consensus 69 --~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l 140 (324)
T 1am5_A 69 --KTVDLTYGTGGM-RGILGQDTVSVGGG-----SDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNM 140 (324)
T ss_dssp --EEEEEECSSCEE-EEEEEEEEEESSSS-----CEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHH
T ss_pred --cEEEEEECCCCe-EEEEEECceeECCc-----EEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhH
Confidence 999999999987 59999999999987 8999999999988663 4 4678999999998765 33333
Q ss_pred ---hhcccCceEEEeccCC--CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCc
Q 014537 236 ---RTTIAGKFSYCLVPVS--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTT 308 (423)
Q Consensus 236 ---~~i~~~~Fs~~l~~~~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~ 308 (423)
+.+..++||+||.+.. .|.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+......+||||||+
T Consensus 141 ~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt 218 (324)
T 1am5_A 141 GSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGS-IHWIPVT-AEKYWQVALDGITVNGQTAACEGCQAIVDTGTS 218 (324)
T ss_dssp HHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSC-CEEEEEE-EETTEEEEECEEEETTEECCCCCEEEEECTTCS
T ss_pred HhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCc-eEEEecC-CCcEEEEEEeEEEECCceeeccCceEEEecCCc
Confidence 4567899999998874 39999999 3456665 9999999 778999999999999987632338899999999
Q ss_pred ceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE-EEec
Q 014537 309 LTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGI 387 (423)
Q Consensus 309 ~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~ 387 (423)
++++|++++++|.+++.+. . ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++. +..|++ |...
T Consensus 219 ~~~lp~~~~~~l~~~~~~~-~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~--~~~C~~~~~~~ 287 (324)
T 1am5_A 219 KIVAPVSALANIMKDIGAS-E----NQGEMMG-NCASVQ---SLPDITFTINGVKQPLPPSAYIEGD--QAFCTSGLGSS 287 (324)
T ss_dssp SEEECTTTHHHHHHHHTCE-E----CCCCEEC-CTTSSS---SSCCEEEEETTEEEEECHHHHEEES--SSCEEECEEEC
T ss_pred cEECCHHHHHHHHHHhCCc-c----cCCcEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccC--CCeEEEEEEEC
Confidence 9999999999999998765 1 1333444 598654 6899999999999999999999886 567996 8764
Q ss_pred C-----CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 388 T-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 388 ~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
+ ...||||++|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 288 GVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp CSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 3 4689999999999999999999999999975
No 8
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4e-58 Score=443.28 Aligned_cols=298 Identities=24% Similarity=0.457 Sum_probs=252.8
Q ss_pred eeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 014537 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (423)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~ 162 (423)
..+..+.+|+++|.||||+|++.|+|||||+++||+|.+|....| ..++.|||++|+||+...
T Consensus 7 l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~--------------- 69 (329)
T 1dpj_A 7 LTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLAC--FLHSKYDHEASSSYKANG--------------- 69 (329)
T ss_dssp CEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE---------------
T ss_pred eeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCccc--CCcCcCCcccCcCeEECC---------------
Confidence 344667899999999999999999999999999999999983347 457899999999999876
Q ss_pred CCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCC-CC-CCCcceeeecCCCCCch---------
Q 014537 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDISL--------- 231 (423)
Q Consensus 163 ~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~sl--------- 231 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||++...+ .| ....+||||||++..++
T Consensus 70 ---~~~~i~Yg~Gs-~~G~~~~D~v~ig~~-----~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (329)
T 1dpj_A 70 ---TEFAIQYGTGS-LEGYISQDTLSIGDL-----TIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYN 140 (329)
T ss_dssp ---EEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHH
T ss_pred ---cEEEEEECCce-EEEEEEEEEEEECCe-----EECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHH
Confidence 99999999995 569999999999986 899999999998765 34 46789999999987653
Q ss_pred -hhhhhhcccCceEEEeccCC-----CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEE
Q 014537 232 -ISQMRTTIAGKFSYCLVPVS-----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVI 303 (423)
Q Consensus 232 -~~ql~~i~~~~Fs~~l~~~~-----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~ii 303 (423)
++| +.+..++||+||.+.. .|.|+||| ..++.|+ +.|+|+. .+.+|.|+|++|+|+++.+......+||
T Consensus 141 l~~q-g~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~aii 217 (329)
T 1dpj_A 141 AIQQ-DLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGD-ITWLPVR-RKAYWEVKFEGIGLGDEYAELESHGAAI 217 (329)
T ss_dssp HHHT-TCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEE-EEEEECS-SBTTBEEEEEEEEETTEEEECSSCEEEE
T ss_pred HHhc-CCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCc-eEEEEcC-CCceEEEEeeeEEECCeEecCCCccEEe
Confidence 334 5577899999997652 39999999 3456664 9999999 7889999999999999987666789999
Q ss_pred ecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE
Q 014537 304 DSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV 383 (423)
Q Consensus 304 DsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~ 383 (423)
||||+++++|++++++|.+++.+. ....+.+.+ +|+... .+|+|+|+|+|++++|++++|+++.. ..|++
T Consensus 218 DSGTt~~~lP~~~~~~l~~~~~~~----~~~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~--~~C~~ 287 (329)
T 1dpj_A 218 DTGTSLITLPSGLAEMINAEIGAK----KGWTGQYTL-DCNTRD---NLPDLIFNFNGYNFTIGPYDYTLEVS--GSCIS 287 (329)
T ss_dssp CTTCSCEEECHHHHHHHHHHHTCE----ECTTSSEEE-CGGGGG---GCCCEEEEETTEEEEECTTTSEEEET--TEEEE
T ss_pred eCCCCcEECCHHHHHHHHHHhCCc----cCCCCeEEE-ECCCCC---cCCcEEEEECCEEEEECHHHhEecCC--CEEEE
Confidence 999999999999999999998654 112334444 488654 68999999999999999999999865 57996
Q ss_pred -EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 384 -FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 384 -i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|.+.+ ...||||++|||++|+|||++++|||||+++
T Consensus 288 ~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 288 AITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 87642 4689999999999999999999999999975
No 9
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=3.8e-58 Score=443.14 Aligned_cols=302 Identities=23% Similarity=0.368 Sum_probs=253.9
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~ 163 (423)
....+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|..+.++.|||++|+||+.++|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~~~~~~y~~~~SsT~~~~~~--------------- 72 (329)
T 3c9x_A 10 SDSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP--KSSATGHAIYTPSKSSTSKKVSG--------------- 72 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCGGGCTTCEECTT---------------
T ss_pred CCCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC--ccccCCCCcCCcccCcCceEcCC---------------
Confidence 4567889999999999999999999999999999999998 67667789999999999998642
Q ss_pred CCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc---------hh
Q 014537 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (423)
Q Consensus 164 ~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------l~ 232 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+...++.+ ....+||||||++..+ ++
T Consensus 73 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 145 (329)
T 3c9x_A 73 --ASWSISYGDGSSSSGDVYTDKVTIGGF-----SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWF 145 (329)
T ss_dssp --CBEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHH
Confidence 899999999997779999999999986 89999999999876644 3678999999997655 34
Q ss_pred hhhh-hcccCceEEEeccCCCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCcc
Q 014537 233 SQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTL 309 (423)
Q Consensus 233 ~ql~-~i~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~ 309 (423)
++|. .+..++||+||.+...|.|+||| .+++.|+ +.|+|+.+..++|.|+|++|+|+++.+......+||||||++
T Consensus 146 ~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 224 (329)
T 3c9x_A 146 SNAASSLAEPLFTADLRHGQNGSYNFGYIDTSVAKGP-VAYTPVDNSQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTL 224 (329)
T ss_dssp HHHHTTSSSSEEEEECCSSSCEEEEESSCCGGGCSSC-EEEEECBCTTSSCEEEECCEEETTCCCCSCCEEEEECTTCCS
T ss_pred HHHHHhcCCCEEEEEecCCCCcEEEEeCcChhhcccc-eEEEEccCCCceEEEEEeeEEECCEeccCCCceEEEECCCCc
Confidence 4443 35689999999886559999999 3466665 999999734689999999999999877556779999999999
Q ss_pred eecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-EEe
Q 014537 310 TFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKG 386 (423)
Q Consensus 310 ~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~ 386 (423)
+++|++++++|.+++.+..... ..+.+.+ +|+. .+|+|+|+|+|++++||+++|++...+ ...|++ |..
T Consensus 225 ~~lp~~~~~~i~~~i~~a~~~~--~~~~~~~-~C~~-----~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~ 296 (329)
T 3c9x_A 225 LLLDDNVVDAYYANVQSAQYDN--QQEGVVF-DCDE-----DLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQS 296 (329)
T ss_dssp EEECHHHHHHHHTTCTTCEEET--TTTEEEE-ETTC-----CCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEE
T ss_pred EeCCHHHHHHHHHhCCCcEEcC--CCCEEEE-ECCC-----CCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEc
Confidence 9999999999988775432111 1233434 4882 689999999999999999999887632 478998 877
Q ss_pred cC-CCcceechhhhcceEEEEECCCCEEEEeeC
Q 014537 387 IT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 418 (423)
Q Consensus 387 ~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~ 418 (423)
.+ ...||||++|||++|+|||++++|||||++
T Consensus 297 ~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 297 SSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp CTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 64 578999999999999999999999999985
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.2e-58 Score=443.57 Aligned_cols=300 Identities=25% Similarity=0.422 Sum_probs=253.3
Q ss_pred ceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 014537 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (423)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c 161 (423)
++.++.+.+|+++|.||||||+++|++||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 4 ~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~-------------- 67 (320)
T 4aa9_A 4 PLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVC--KNHHRFDPRKSSTFRNLG-------------- 67 (320)
T ss_dssp ----CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHH--HTSCCBCGGGCTTCEEEE--------------
T ss_pred cceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCcccc--CCCCCCCCCCCcCeEcCC--------------
Confidence 3445678899999999999999999999999999999999985556 467899999999999987
Q ss_pred CCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc------hhh
Q 014537 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LIS 233 (423)
Q Consensus 162 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------l~~ 233 (423)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||+....+. + ....+||||||++..+ +++
T Consensus 68 ----~~~~i~Yg~gs~-~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~ 137 (320)
T 4aa9_A 68 ----KPLSIHYGTGSM-EGFLGYDTVTVSNI-----VDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFD 137 (320)
T ss_dssp ----EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHH
T ss_pred ----cEEEEEECCcEE-EEEEEEEEEEECCE-----eecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHH
Confidence 999999999985 69999999999987 9999999999988763 4 5678999999997654 333
Q ss_pred hh---hhcccCceEEEeccC-CCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec-cCCCcEEEecC
Q 014537 234 QM---RTTIAGKFSYCLVPV-SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG-VSTPDIVIDSG 306 (423)
Q Consensus 234 ql---~~i~~~~Fs~~l~~~-~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~-~~~~~~iiDsG 306 (423)
+| +.+..++||+||.+. ..|.|+||| ..++.|+ +.|+|+. ...+|.|++++|+|+++.+. .....++||||
T Consensus 138 ~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsG 215 (320)
T 4aa9_A 138 NMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGS-LHWVPVT-LQQYWQFTVDSVTINGVAVACVGGCQAILDTG 215 (320)
T ss_dssp HHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEE-EEEEECS-SBTTBEEEECEEEETTEEEESTTCEEEEECTT
T ss_pred HHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCc-eEEEEcc-cCCceEEEEeEEEECCEEeccCCCcEEEEECC
Confidence 33 557889999999986 339999999 4456665 9999999 78999999999999998874 35678999999
Q ss_pred CcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE-EE
Q 014537 307 TTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FK 385 (423)
Q Consensus 307 t~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~-i~ 385 (423)
|+++++|++++++|.+++.+.. ...+.+.+ +|+... .+|+|+|+|+|++++|++++|+.+. +..|++ |.
T Consensus 216 tt~~~lP~~~~~~i~~~~~~~~----~~~g~~~~-~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~--~~~C~~~i~ 285 (320)
T 4aa9_A 216 TSVLFGPSSDILKIQMAIGATE----NRYGEFDV-NCGNLR---SMPTVVFEINGRDYPLSPSAYTSKD--QGFCTSGFQ 285 (320)
T ss_dssp CSSEEEEHHHHHHHHHHTTCEE----CTTSCEEE-CGGGGG---GCCCEEEEETTEEEEECHHHHEEEE--TTEEEESEE
T ss_pred CCcEECCHHHHHHHHHHhCCcc----cCCCcEEE-eCCCCC---cCceEEEEECCEEEEECHHHhccCC--CCeEEEEEE
Confidence 9999999999999998886542 12344444 498764 6899999999999999999999773 468997 87
Q ss_pred ecC-CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 386 GIT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 386 ~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
... ...||||++|||++|+|||++++|||||+++
T Consensus 286 ~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 286 GDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp EETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 654 4679999999999999999999999999975
No 11
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=9.4e-58 Score=446.23 Aligned_cols=304 Identities=20% Similarity=0.347 Sum_probs=256.8
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~-~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~ 162 (423)
.+..+..|+++|.||||+|++.|+|||||+++||+|..|. ...|. .++.|||++|+||+...
T Consensus 13 ~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~--------------- 75 (361)
T 1mpp_A 13 YDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV--GKRFFDPSSSSTFKETD--------------- 75 (361)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC--SSCCBCGGGCTTCEEEE---------------
T ss_pred ecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC--CCCcCCCccCCceEecC---------------
Confidence 3457889999999999999999999999999999999997 56784 57899999999999987
Q ss_pred CCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCC------CC-CCCcceeeecCCCCCchh---
Q 014537 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG------LF-NSKTTGIVGLGGGDISLI--- 232 (423)
Q Consensus 163 ~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~------~~-~~~~~GilGLg~~~~sl~--- 232 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ .| ....+||||||++.+++.
T Consensus 76 ---~~~~i~Yg~Gs-~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~ 146 (361)
T 1mpp_A 76 ---YNLNITYGTGG-ANGIYFRDSITVGGA-----TVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAE 146 (361)
T ss_dssp ---EEEEEECSSCE-EEEEEEEEEEEETTE-----EEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHH
T ss_pred ---CeEEEEECCce-EEEEEEEEEEEECCE-----EEeceEEEEEEeccCccccccccccCCCCCEEEeCCccccccccc
Confidence 99999999998 569999999999986 899999999998765 34 467899999999865532
Q ss_pred ---------hhh---hhcccCceEEEeccCC-CceeeeCC--CCccCCCCeEEeeccCCCC----ceEEEeEEEEeccEE
Q 014537 233 ---------SQM---RTTIAGKFSYCLVPVS-STKINFGT--NGIVSGPGVVSTPLTKAKT----FYVLTIDAISVGNQR 293 (423)
Q Consensus 233 ---------~ql---~~i~~~~Fs~~l~~~~-~g~l~fGg--~~~~~g~~~~~~p~~~~~~----~w~v~l~~i~v~~~~ 293 (423)
.+| +.+..++||+||.+.. .|.|+||| ..++.|+ +.|+|+. ... +|.|+|++|+|+++.
T Consensus 147 ~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~~~~~v~l~~i~v~~~~ 224 (361)
T 1mpp_A 147 YGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGD-IQYTDVL-KSRGGYFFWDAPVTGVKIDGSD 224 (361)
T ss_dssp HSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSC-CEEEECE-EETTEEEEEEEEEEEEEETTEE
T ss_pred ccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCc-eEEEEcc-cCCCceeEEEEEEeEEEECCee
Confidence 233 4567899999999863 39999999 3456665 9999998 333 999999999999987
Q ss_pred ec-cCCCcEE-EecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCC-CeEEEEE--e-----CcE
Q 014537 294 LG-VSTPDIV-IDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQV-PEVTIHF--R-----GAD 363 (423)
Q Consensus 294 ~~-~~~~~~i-iDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~-P~i~~~f--~-----g~~ 363 (423)
+. .....+| |||||+++++|++++++|++++.+.... ..+.+.+ +|+... .+ |+|+|+| + |++
T Consensus 225 ~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~-~C~~~~---~~~p~i~f~f~~g~~~~~g~~ 297 (361)
T 1mpp_A 225 AVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE---SQQGYTV-PCSKYQ---DSKTTFSLVLQKSGSSSDTID 297 (361)
T ss_dssp EEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE---ETTEEEE-EHHHHT---TCCCEEEEEEECTTCSSCEEE
T ss_pred eccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC---CCCcEEE-ECCCcc---cCCCcEEEEEEcCCcCCCCeE
Confidence 62 3457899 9999999999999999999998764321 1233434 599654 56 9999999 7 899
Q ss_pred EEeCCCceEEEeC-CCeEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 364 VKLSRSNFFVKVS-EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 364 ~~l~~~~~~~~~~-~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
|+|++++|+++.. ++..|+. |.+.....||||++|||++|+|||++++|||||+++|+.
T Consensus 298 ~~i~~~~y~~~~~~~~~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~ 358 (361)
T 1mpp_A 298 VSVPISKMLLPVDKSGETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGY 358 (361)
T ss_dssp EEEEGGGGEEECSSSSCEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTT
T ss_pred EEECHHHhEEecCCCCCeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCC
Confidence 9999999999875 3568986 887546789999999999999999999999999999974
No 12
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-57 Score=440.89 Aligned_cols=298 Identities=23% Similarity=0.415 Sum_probs=252.4
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCC--CCCC-------CCCCCCCCCCCCCCCCCcccccCCCCc
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCPP-------SQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~--~c~~-------~~C~~~~~~~y~p~~Sst~~~~~c~~~ 151 (423)
..++...+..|+++|.||||+|++.|+|||||+++||+|. +|.. ..| ..++.|||++|+||+...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (334)
T 1j71_A 4 PTTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC--KQEGTFDPSSSSSAQNLN---- 77 (334)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GSSCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc--cCCCcCCcccCCCcccCC----
Confidence 4556667889999999999999999999999999999866 6762 246 467899999999999987
Q ss_pred cccCCCCCCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCCCCCcceeeecCCCCC--
Q 014537 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (423)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+.... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (334)
T 1j71_A 78 --------------QDFSIEYGDLTSSQGSFYKDTVGFGGI-----SIKNQQFADVTTTS-----VDQGIMGIGFTADEA 133 (334)
T ss_dssp --------------EEEEEEBTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGSS
T ss_pred --------------CceEEEECCCCEEEEEEEEEEEEECCE-----EEccEEEEEEEecC-----CCccEEEEcCCcccC
Confidence 999999999998889999999999986 89999999999763 5689999999764
Q ss_pred ------chhhhh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEecc
Q 014537 230 ------SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV 296 (423)
Q Consensus 230 ------sl~~ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 296 (423)
+++.|| +.+.+++||+||.+... |.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+ .
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~-~ 210 (334)
T 1j71_A 134 GYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGT-LTALPVT-SSVELRVHLGSINFDGTSV-S 210 (334)
T ss_dssp TTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEE-EEEEECC-CSSSCEEEEEEEEETTEEE-E
T ss_pred ccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCc-eEEEEcc-CCCeEEEEEeEEEECCEec-c
Confidence 344444 45678999999987533 9999999 5567765 9999999 6789999999999999987 4
Q ss_pred CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEE-eCcEEEeCCCceEEEe
Q 014537 297 STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKV 375 (423)
Q Consensus 297 ~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f-~g~~~~l~~~~~~~~~ 375 (423)
....+||||||+++++|++++++|++++.+.... ....+.+.+|+ .+|+|+|+| +|++++|++++|+++.
T Consensus 211 ~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~C~------~~p~i~f~f~~g~~~~i~~~~y~~~~ 281 (334)
T 1j71_A 211 TNADVVLDSGTTITYFSQSTADKFARIVGATWDS---RNEIYRLPSCD------LSGDAVFNFDQGVKITVPLSELILKD 281 (334)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEET---TTTEEECSSSC------CCSEEEEEESTTCEEEEEGGGGEEEC
T ss_pred CCccEEEeCCCCcEecCHHHHHHHHHHcCCcccC---CCceEEEEcCC------CCCceEEEEcCCcEEEECHHHheeec
Confidence 4578999999999999999999999999876531 12233313587 479999999 5899999999999987
Q ss_pred CCCeEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 376 SEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 376 ~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
.++..|++ |... +.||||++|||++|+|||++++|||||+++|.+
T Consensus 282 ~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 327 (334)
T 1j71_A 282 SDSSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQVKYTS 327 (334)
T ss_dssp SSSSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEECCCS
T ss_pred CCCCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEecCCCC
Confidence 55556998 7765 479999999999999999999999999999974
No 13
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.3e-58 Score=441.65 Aligned_cols=301 Identities=22% Similarity=0.342 Sum_probs=251.3
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~ 163 (423)
....+.+|+++|.||||+|++.|+|||||+++||+|.+|. .|.. .++.|||++|+||+.+.|
T Consensus 10 ~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~--~~~~-~~~~y~~~~SsT~~~~~~--------------- 71 (329)
T 1oew_A 10 IDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT--ASEV-XQTIYTPSKSTTAKLLSG--------------- 71 (329)
T ss_dssp SSTTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC--GGGC--CCCBCGGGCTTCEEEEE---------------
T ss_pred cCCCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC--cccc-ccCccCCccCccceecCC---------------
Confidence 3457889999999999999999999999999999999998 6755 788999999999998641
Q ss_pred CCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc---------hh
Q 014537 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (423)
Q Consensus 164 ~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------l~ 232 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.+ ....+||||||++.++ ++
T Consensus 72 --~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~ 144 (329)
T 1oew_A 72 --ATWSISYGDGSSSSGDVYTDTVSVGGL-----TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFF 144 (329)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEeCCCCcEEEEEEEEEEEECCE-----EEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHH
Confidence 899999999997779999999999987 89999999999876644 3678999999997655 34
Q ss_pred hhhh-hcccCceEEEeccCCCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCcc
Q 014537 233 SQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTL 309 (423)
Q Consensus 233 ~ql~-~i~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~ 309 (423)
++|. .+..++||+||.+...|.|+||| .+++.|+ +.|+|+.+..++|.|+|++|+|+++.+......+||||||++
T Consensus 145 ~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~ 223 (329)
T 1oew_A 145 DNAKASLDSPVFTADLGYHAPGTYNFGFIDTTAYTGS-ITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTL 223 (329)
T ss_dssp HHHTTTSSSSEEEEECCSSSCEEEEESCCCTTSSSSC-CEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCS
T ss_pred HHHHHhccCcEEEEEccCCCCeEEEEeccChHhcccc-eEEEEccCCCceEEEEEeeEEECCeeccCCCceEEEeCCCCC
Confidence 4443 25689999999875559999999 4566665 999999744689999999999999876445678999999999
Q ss_pred eecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-EEe
Q 014537 310 TFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKG 386 (423)
Q Consensus 310 ~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~ 386 (423)
+++|++++++|++++.+..... ..+.+.+ +|+. .+|+|+|+|+|++++||+++|+++..+ ...|++ |..
T Consensus 224 ~~lP~~~~~~l~~~i~~a~~~~--~~g~~~~-~C~~-----~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~ 295 (329)
T 1oew_A 224 LYLPATVVSAYWAQVSGAKSSS--SVGGYVF-PCSA-----TLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQS 295 (329)
T ss_dssp EEECHHHHHHHHTTSTTCEEET--TTTEEEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEE
T ss_pred EECCHHHHHHHHHhCCCcEEcC--CCCEEEE-ECCC-----CCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEe
Confidence 9999999999988874432111 1233434 4883 689999999999999999999887532 468999 876
Q ss_pred cC-CCcceechhhhcceEEEEEC-CCCEEEEeeC
Q 014537 387 IT-NSVPIYGNIMQTNFLVGYDI-EQQTVSFKPT 418 (423)
Q Consensus 387 ~~-~~~~ilG~~fl~~~y~vfD~-~~~~igfa~~ 418 (423)
.+ ...||||++|||++|+|||+ +++|||||++
T Consensus 296 ~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 296 SAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp STTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 64 57899999999999999999 9999999985
No 14
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.4e-57 Score=441.73 Aligned_cols=300 Identities=20% Similarity=0.391 Sum_probs=251.8
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCC--CCC-------CCCCCCCCCCCCCCCCCCcccccCCCCc
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCE--PCP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~--~c~-------~~~C~~~~~~~y~p~~Sst~~~~~c~~~ 151 (423)
..++...+.+|+++|.||||+|++.|+|||||+++||++. +|. ...| ..++.|||++|+||+...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 2qzx_A 4 AVTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC--KSAGSYSPASSRTSQNLN---- 77 (342)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred eEEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc--cCCCcCCcccCCCcccCC----
Confidence 4455667889999999999999999999999999999866 675 1246 467899999999999987
Q ss_pred cccCCCCCCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCCCCCcceeeecCCCCC--
Q 014537 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (423)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+.... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 2qzx_A 78 --------------TRFDIKYGDGSYAKGKLYKDTVGIGGV-----SVRDQLFANVWSTS-----ARKGILGIGFQSGEA 133 (342)
T ss_dssp --------------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEEC-----SSSCEEECSCGGGCS
T ss_pred --------------CcEEEEeCCCCeEEEEEEEEEEEECCE-----EecceEEEEEEecC-----CCcCEEEEccccccC
Confidence 999999999998889999999999986 89999999999763 5689999999764
Q ss_pred ------chhhhh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEecc
Q 014537 230 ------SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV 296 (423)
Q Consensus 230 ------sl~~ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~ 296 (423)
+++.|| +.+.+++||+||.+... |.|+||| .+++.|+ +.|+|+. ...+|.|+|++|+|+++.+ .
T Consensus 134 ~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~-~ 210 (342)
T 2qzx_A 134 TEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGS-LVDLPIT-SEKKLTVGLRSVNVRGRNV-D 210 (342)
T ss_dssp SSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEECC-CSSSCEEEEEEEEETTEEE-E
T ss_pred CCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecc-eEEEecc-CCceEEEEEeEEEECCEec-C
Confidence 344444 45678999999987533 9999999 5677775 9999999 6779999999999999887 3
Q ss_pred CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEE-eCcEEEeCCCceEEEe
Q 014537 297 STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHF-RGADVKLSRSNFFVKV 375 (423)
Q Consensus 297 ~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f-~g~~~~l~~~~~~~~~ 375 (423)
....+||||||+++++|++++++|++++.+.........+.+.+ +|+ .+|+|+|+| +|++++|++++|+++.
T Consensus 211 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~-~C~------~~p~i~f~f~~g~~~~i~~~~~~~~~ 283 (342)
T 2qzx_A 211 ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVA-DCK------TSGTIDFQFGNNLKISVPVSEFLFQT 283 (342)
T ss_dssp EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEE-CTT------CCCEEEEEETTTEEEEEEGGGGEECC
T ss_pred CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEE-ECC------CCCcEEEEECCCcEEEEcHHHhcccc
Confidence 45789999999999999999999999998765322111113444 487 479999999 5899999999999874
Q ss_pred C-----CCeEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 376 S-----EDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 376 ~-----~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
. ++..|++ |... +.||||++|||++|+|||++++|||||+++|.+
T Consensus 284 ~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 2qzx_A 284 YYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS 334 (342)
T ss_dssp BCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred cccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC
Confidence 2 2467998 7665 479999999999999999999999999999974
No 15
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=8.2e-58 Score=441.09 Aligned_cols=296 Identities=27% Similarity=0.485 Sum_probs=253.1
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCC
Q 014537 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (423)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~~ 165 (423)
..+.+|+++|.||||+|++.|++||||+++||+|..|....|. .++.|||++|+||+...
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~--~~~~y~~~~SsT~~~~~------------------ 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACT--SHSRFNPSESSTYSTNG------------------ 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHH--TSCCBCGGGCTTCEEEE------------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccC--CCCcCCCccCCCeEECC------------------
Confidence 6788999999999999999999999999999999999844584 57899999999999987
Q ss_pred ceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc------hhhhh--
Q 014537 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------LISQM-- 235 (423)
Q Consensus 166 ~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------l~~ql-- 235 (423)
|.|.+.|++|+. .|.+++|+|+|++. .++++.|||+....+. | ....+||||||++..+ ++.+|
T Consensus 69 ~~~~i~Yg~gs~-~G~~~~D~v~~g~~-----~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~ 142 (329)
T 1htr_B 69 QTFSLQYGSGSL-TGFFGYDTLTVQSI-----QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQ 142 (329)
T ss_dssp EEEEEEETTEEE-EEEEEEEEEEETTE-----EEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHH
T ss_pred cEEEEEeCCCCe-EEEEEeeeEEEcce-----EECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHh
Confidence 999999999987 69999999999986 8999999999987653 4 4678999999998765 33333
Q ss_pred -hhcccCceEEEeccCC---CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec--cCCCcEEEecCC
Q 014537 236 -RTTIAGKFSYCLVPVS---STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--VSTPDIVIDSGT 307 (423)
Q Consensus 236 -~~i~~~~Fs~~l~~~~---~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~~iiDsGt 307 (423)
+.+..++||+||.+.. .|.|+||| .+++.|+ +.|+|+. .+.+|.|+|++|+|+++.+. .....+||||||
T Consensus 143 qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGT 220 (329)
T 1htr_B 143 EGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQ-IYWAPVT-QELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGT 220 (329)
T ss_dssp TTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEE-EEEEEBC-SSSSCEEEECEEEETTEECCTTTTCEEEEECTTC
T ss_pred cCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCc-eEEEECC-CCceEEEEEeEEEECCceeeecCCCceEEEecCC
Confidence 5577899999999874 39999999 3456664 9999999 78899999999999998863 456789999999
Q ss_pred cceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE-EEe
Q 014537 308 TLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKG 386 (423)
Q Consensus 308 ~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~ 386 (423)
+++++|++++++|.+++.+... ..+.+.+ +|+... .+|+|+|+|+|++++|++++|+++.. + .|++ |..
T Consensus 221 t~~~lp~~~~~~l~~~~~~~~~----~~g~~~~-~C~~~~---~~P~i~f~f~g~~~~i~~~~y~~~~~-g-~C~~~~~~ 290 (329)
T 1htr_B 221 SLLTVPQQYMSALLQATGAQED----EYGQFLV-NCNSIQ---NLPSLTFIINGVEFPLPPSSYILSNN-G-YCTVGVEP 290 (329)
T ss_dssp CSEEEEGGGHHHHHHHHTCEEC----TTSCEEE-CGGGGG---GSCCEEEEETTEEEEECHHHHEEECS-S-CEEESEEE
T ss_pred ccEECCHHHHHHHHHHhCCeec----CCCeEEE-eCCCcc---cCCcEEEEECCEEEEECHHHhcccCC-C-EEEEEEEE
Confidence 9999999999999999865432 1333444 598754 68999999999999999999999876 3 8996 876
Q ss_pred cC-----CC-cceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 387 IT-----NS-VPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 387 ~~-----~~-~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
.+ .. .||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 291 TYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp ECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 42 34 79999999999999999999999999975
No 16
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=6.6e-57 Score=452.85 Aligned_cols=305 Identities=26% Similarity=0.416 Sum_probs=251.4
Q ss_pred ceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 014537 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (423)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~-~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 160 (423)
+..+..+.+|+++|.||||||+|.|+|||||+++||+|..|. ...|. .++.|||++|+||+...
T Consensus 45 ~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------- 109 (478)
T 1qdm_A 45 ALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY--LHSRYKAGASSTYKKNG------------- 109 (478)
T ss_dssp GGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG--GSCCBCGGGCTTCBCCC-------------
T ss_pred EeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc--CCCCCCcccCCCeeeCC-------------
Confidence 333456789999999999999999999999999999999996 34684 56899999999999876
Q ss_pred CCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc--------
Q 014537 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS-------- 230 (423)
Q Consensus 161 c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s-------- 230 (423)
+.|.+.|++|+ +.|.+++|+|+|++. .++++.||++....+. | ...++||||||++.++
T Consensus 110 -----~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~-----~v~~~~Fg~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~ 178 (478)
T 1qdm_A 110 -----KPAAIQYGTGS-IAGYFSEDSVTVGDL-----VVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVW 178 (478)
T ss_dssp -----CEEEEEETTEE-EEEEEEEEEEEETTE-----EEEEEEEEEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHH
T ss_pred -----cEEEEEcCCCC-eEEEEEEEEEEECCe-----EECCEEEEEEEecCCcccccccccceecccccccccCCCCcHH
Confidence 89999999998 559999999999987 8999999999987653 4 4678999999998776
Q ss_pred --hhhhhhhcccCceEEEeccCC----CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec--cCCCc
Q 014537 231 --LISQMRTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--VSTPD 300 (423)
Q Consensus 231 --l~~ql~~i~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~ 300 (423)
+++| +.+..++||+||.+.. .|.|+||| ..++.|+ ++|+|+. ..++|.|+|++|+|+++.+. .....
T Consensus 179 ~~l~~q-g~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~-l~~~pv~-~~~~w~v~l~~i~v~g~~~~~~~~~~~ 255 (478)
T 1qdm_A 179 YKMIEQ-GLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGE-HTYVPVT-QKGYWQFDMGDVLVGGKSTGFCAGGCA 255 (478)
T ss_dssp HHHTTT-TCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEE-EEEEEEE-EETTEEEEECCEEETTEECSTTTTCEE
T ss_pred HHHHHC-CCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCC-ceEEecc-CCCeEEEEEeEEEECCEEEeecCCCce
Confidence 3344 5577899999998852 39999999 4466665 9999999 77899999999999998762 35678
Q ss_pred EEEecCCcceecChhHHHHHHHHHHhhhc----------------------c-----------------C----------
Q 014537 301 IVIDSGTTLTFLPQGYNSNLLSVMSSMIE----------------------A-----------------Q---------- 331 (423)
Q Consensus 301 ~iiDsGt~~~~lp~~~~~~l~~~~~~~~~----------------------~-----------------~---------- 331 (423)
+||||||+++++|.+++++|.+++.+... . .
T Consensus 256 aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v 335 (478)
T 1qdm_A 256 AIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSV 335 (478)
T ss_dssp EEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC---------------
T ss_pred EEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCcccccccccccc
Confidence 99999999999999999999998864210 0 0
Q ss_pred ---------------------------------------------------cCCCCCCCcccccccCCCCCCCeEEEEEe
Q 014537 332 ---------------------------------------------------PVADPTGSLELCYSFNSLSQVPEVTIHFR 360 (423)
Q Consensus 332 ---------------------------------------------------~~~~~~~~~~~C~~~~~~~~~P~i~~~f~ 360 (423)
....+.+.+ +|.... .+|+|+|+|+
T Consensus 336 ~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v-~C~~~~---~lP~i~f~~g 411 (478)
T 1qdm_A 336 VDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAV-DCGSLG---SMPDIEFTIG 411 (478)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEE-CGGGGT---TCCCEEEEET
T ss_pred ccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEe-eccccc---ccccEEEEEC
Confidence 000122333 366443 6899999999
Q ss_pred CcEEEeCCCceEEEeCC--CeEEEE-EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 361 GADVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 361 g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|++|+|+|++|+++... ...|++ |...+ ...||||+.|||++|+|||++++|||||+++
T Consensus 412 g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 412 GKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp TEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 99999999999998764 358998 77532 4679999999999999999999999999874
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=9.3e-57 Score=445.10 Aligned_cols=322 Identities=20% Similarity=0.361 Sum_probs=255.2
Q ss_pred ecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCC------
Q 014537 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ------ 158 (423)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~------ 158 (423)
+..+++|+++|.||||||++.|+|||||+++||+|.+| .+|+||+.+.|.++.|.....
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~---------------~~Sst~~~~~C~s~~C~~~~~~~c~~c 81 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ---------------YSSKTYQAPFCHSTQCSRANTHQCLSC 81 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC---------------CCCSSCBCCCTTBHHHHHTTCCCEEEC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC---------------CCCCCCCccCCCCccccCccccCcccc
Confidence 34678999999999999999999999999999988754 378999999999999975432
Q ss_pred -----CCCCCCCceeeEEcC-CCCeeeEEEEEEEEEecCCCCCc------eecCceEEEeEEecCCC-C-CCCcceeeec
Q 014537 159 -----KSCSGVNCQYSVSYG-DGSFSNGNLATETVTLGSTTGQA------VALPGITFGCGTNNGGL-F-NSKTTGIVGL 224 (423)
Q Consensus 159 -----~~c~~~~~~~~~~Yg-~g~~~~G~~~~D~v~ig~~~~~~------~~~~~~~fg~~~~~~~~-~-~~~~~GilGL 224 (423)
..|....|.|.+.|+ +|+.+.|.+++|+|+|++.++.. +.++++.|||+...... + ....+|||||
T Consensus 82 ~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGL 161 (403)
T 3aup_A 82 PAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGL 161 (403)
T ss_dssp SSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEEC
T ss_pred CCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEEC
Confidence 245445799999998 78888899999999999854432 68999999999987543 3 4678999999
Q ss_pred CCCCCchhhhhhh--cccCceEEEeccCC--CceeeeCC-CCcc--C-C----CCeEEeecc-CCCCceEEEeEEEEecc
Q 014537 225 GGGDISLISQMRT--TIAGKFSYCLVPVS--STKINFGT-NGIV--S-G----PGVVSTPLT-KAKTFYVLTIDAISVGN 291 (423)
Q Consensus 225 g~~~~sl~~ql~~--i~~~~Fs~~l~~~~--~g~l~fGg-~~~~--~-g----~~~~~~p~~-~~~~~w~v~l~~i~v~~ 291 (423)
|++.+++..|++. +..++||+||.+.. .|.|+||| ..++ . | .++.|+|++ +..++|.|+|++|+|++
T Consensus 162 g~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGgd~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~i~v~g 241 (403)
T 3aup_A 162 GHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQ 241 (403)
T ss_dssp SSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESCHHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEEEEETT
T ss_pred CCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECCCchhccccccccccCceeecccccCCCCcceEEEEEEEECC
Confidence 9999999998854 56799999998852 39999999 2233 3 3 259999999 33479999999999999
Q ss_pred EEe-cc----------CCCcEEEecCCcceecChhHHHHHHHHHHhhhcc-CcCCCCCCCcccccccCCCCCCCeEEEEE
Q 014537 292 QRL-GV----------STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEA-QPVADPTGSLELCYSFNSLSQVPEVTIHF 359 (423)
Q Consensus 292 ~~~-~~----------~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~C~~~~~~~~~P~i~~~f 359 (423)
+.+ .. +..++||||||++++||+++|++|++++.+.+.. ... .....+..|++......+|+|+|+|
T Consensus 242 ~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~-~~~~~~~~c~~c~~~~~~P~i~f~f 320 (403)
T 3aup_A 242 HSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQV-KSVAPFGLCFNSNKINAYPSVDLVM 320 (403)
T ss_dssp EEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEE-CCCTTCSCEECGGGCCCCCCEEEEE
T ss_pred EEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhcccccc-CCCCCCCceEECCCcCcCCcEEEEE
Confidence 876 31 1346999999999999999999999999776532 111 1111112354332222689999999
Q ss_pred eCc---EEEeCCCceEEEeCCCeEEEEEEecC---CCcceechhhhcceEEEEECCCCEEEE-------eeCCCCC
Q 014537 360 RGA---DVKLSRSNFFVKVSEDIVCSVFKGIT---NSVPIYGNIMQTNFLVGYDIEQQTVSF-------KPTDCTK 422 (423)
Q Consensus 360 ~g~---~~~l~~~~~~~~~~~~~~C~~i~~~~---~~~~ilG~~fl~~~y~vfD~~~~~igf-------a~~~c~~ 422 (423)
+|. +|+|++++|+++..++..|++|+..+ ...||||+.|||++|+|||++++|||| ++++|++
T Consensus 321 ~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~ 396 (403)
T 3aup_A 321 DKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCAD 396 (403)
T ss_dssp SSTTCCEEEECHHHHEEEC---CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSCGGGGTCCGGG
T ss_pred cCCCceEEEEcccceEEEcCCCeEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEecccccccCCCccc
Confidence 984 99999999999876567899988764 258999999999999999999999999 7788865
No 18
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=5.1e-57 Score=438.08 Aligned_cols=301 Identities=21% Similarity=0.412 Sum_probs=251.3
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCC--CC-------CCCCCCCCCCCCCCCCCCcccccCCCCc
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEP--CP-------PSQCYMQDSPLFDPKMSSTYKSLPCSSS 151 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~--c~-------~~~C~~~~~~~y~p~~Sst~~~~~c~~~ 151 (423)
.+++..++.+|+++|.||||||++.|++||||+++||++.. |. ...| ..++.|||++|+||+...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C--~~~~~y~~~~SsT~~~~~---- 77 (342)
T 3pvk_A 4 PVTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC--KQKGTYDPSGSSASQDLN---- 77 (342)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG--GTTCCBCGGGCTTCEEEE----
T ss_pred ceEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC--CCCCcCCCccCcceeecC----
Confidence 44566678999999999999999999999999999998654 53 2357 357899999999999987
Q ss_pred cccCCCCCCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCCCCCcceeeecCCCCC--
Q 014537 152 QCASLNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDI-- 229 (423)
Q Consensus 152 ~C~~~~~~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~-- 229 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.||++.... ..+||||||++..
T Consensus 78 --------------~~~~i~Yg~gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~-----~~~GilGLg~~~~~~ 133 (342)
T 3pvk_A 78 --------------TPFKIGYGDGSSSQGTLYKDTVGFGGV-----SIKNQVLADVDSTS-----IDQGILGVGYKTNEA 133 (342)
T ss_dssp --------------EEEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEES-----SSSCEEECSCGGGCS
T ss_pred --------------CeEEEEecCCCeEEEEEEEEEEEECCE-----EecceEEEEEEccC-----CCccEEEecCccccc
Confidence 999999999998889999999999987 99999999998764 5689999999873
Q ss_pred -----chhhhh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccC
Q 014537 230 -----SLISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVS 297 (423)
Q Consensus 230 -----sl~~ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~ 297 (423)
+++.|| +.+..++||+||.+... |.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+...
T Consensus 134 ~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~ 211 (342)
T 3pvk_A 134 GGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGS-LIALPVT-SDRELRISLGSVEVSGKTINTD 211 (342)
T ss_dssp SCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEECC-CSSSCEEEEEEEEETTEEEEEE
T ss_pred cccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeee-eEEeecC-ccceEEEEEeEEEECCEEecCC
Confidence 444444 55788999999987643 9999999 5677776 9999999 6779999999999999988544
Q ss_pred CCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEe-CcEEEeCCCceEEEeC
Q 014537 298 TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNFFVKVS 376 (423)
Q Consensus 298 ~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~-g~~~~l~~~~~~~~~~ 376 (423)
...+||||||++++||++++++|.+++.+...........+.+ +|+ ..|+|+|+|+ |.+++||+++|+++..
T Consensus 212 ~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~------~~p~i~f~f~~g~~~~vp~~~~~~~~~ 284 (342)
T 3pvk_A 212 NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEV-DCN------LSGDVVFNFSKNAKISVPASEFAASLQ 284 (342)
T ss_dssp EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEE-CSC------CCSEEEEEESTTCEEEEEGGGGEEC--
T ss_pred CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEE-ecC------CCCceEEEECCCCEEEEcHHHheeecc
Confidence 5789999999999999999999999997765322111112333 488 4699999998 7999999999998732
Q ss_pred --CC---eEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 377 --ED---IVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 377 --~~---~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
++ ..|++ |.+. +.||||++|||++|+|||++++|||||+++|+.
T Consensus 285 ~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 334 (342)
T 3pvk_A 285 GDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQVKYTS 334 (342)
T ss_dssp --------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred ccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC
Confidence 22 67988 7764 689999999999999999999999999999974
No 19
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=3.7e-57 Score=442.98 Aligned_cols=294 Identities=19% Similarity=0.402 Sum_probs=251.2
Q ss_pred ecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCC
Q 014537 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGV 164 (423)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~ 164 (423)
+..+.+|+++|.||||+|++.|+|||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 58 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C--~~~~~y~~~~SsT~~~~~----------------- 118 (375)
T 1miq_A 58 DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGC--SIKNLYDSSKSKSYEKDG----------------- 118 (375)
T ss_dssp GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGG--GGSCCBCGGGCTTCEEEE-----------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccc--cCCCcCCCccCCceEECC-----------------
Confidence 4567899999999999999999999999999999999985578 457899999999999987
Q ss_pred CceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEe----cCCCC-CCCcceeeecCCCCCc------hhh
Q 014537 165 NCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS------LIS 233 (423)
Q Consensus 165 ~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s------l~~ 233 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .+++ .|||+.. .. .| ....+||||||++..+ ++.
T Consensus 119 -~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~-----~v~~-~Fg~~~~~~~~~~-~f~~~~~dGilGLg~~~~s~~~~~~~~~ 189 (375)
T 1miq_A 119 -TKVDITYGSGT-VKGFFSKDLVTLGHL-----SMPY-KFIEVTDTDDLEP-IYSSVEFDGILGLGWKDLSIGSIDPIVV 189 (375)
T ss_dssp -EEEEEEETTEE-EEEEEEEEEEEETTE-----EEEE-EEEEEEECGGGTT-HHHHSCCCEEEECSSCCTTCSSCCCHHH
T ss_pred -cEEEEEeCCCe-EEEEEEEEEEEEcCc-----eECc-EEEEEEecccccc-ccccCCCceEEeCCCCcccccCCCCHHH
Confidence 99999999998 469999999999986 8899 9999998 44 44 4678999999998765 233
Q ss_pred hh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecC
Q 014537 234 QM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSG 306 (423)
Q Consensus 234 ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsG 306 (423)
+| +.+..++||+||.+.+. |.|+||| ..++.|+ +.|+|+. ..++|.|+|+ |+|+++.+ ....+|||||
T Consensus 190 ~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~-i~v~g~~~--~~~~aiiDSG 264 (375)
T 1miq_A 190 ELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGN-ITYEKLN-HDLYWQIDLD-VHFGKQTM--EKANVIVDSG 264 (375)
T ss_dssp HHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEE-EEEEEBS-SSSSSEEEEE-EEETTEEE--EEEEEEECTT
T ss_pred HHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCc-eEEEecC-CCceEEEEEE-EEECCEEc--ccceEEecCC
Confidence 33 55778999999998743 9999999 3456664 9999999 7899999999 99999887 5678999999
Q ss_pred CcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeC--CCeEEEE-
Q 014537 307 TTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIVCSV- 383 (423)
Q Consensus 307 t~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~--~~~~C~~- 383 (423)
|+++++|.+++++|.+++.+.... ..+.+.+ +|+. . .+|+|+|+|+|++|+|++++|+++.. +...|+.
T Consensus 265 Ts~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~-~C~~-~---~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~~~ 336 (375)
T 1miq_A 265 TTTITAPSEFLNKFFANLNVIKVP---FLPFYVT-TCDN-K---EMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCMIT 336 (375)
T ss_dssp BSSEEECHHHHHHHHHHHTCEECT---TSSCEEE-ETTC-T---TCCCEEEECSSCEEEECGGGSEEESSSSSCSEEEES
T ss_pred CccEEcCHHHHHHHHHHhCCcccC---CCCeEEE-ECCC-C---CCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEE
Confidence 999999999999999998764221 1333434 5986 2 68999999999999999999999875 3458986
Q ss_pred EEecC--CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 384 FKGIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 384 i~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|.+.+ ...||||++|||++|+|||++++|||||+++
T Consensus 337 ~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 337 MLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 88775 3789999999999999999999999999975
No 20
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.2e-57 Score=451.70 Aligned_cols=295 Identities=20% Similarity=0.381 Sum_probs=249.8
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~ 163 (423)
.+..+.+|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 133 ~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C--~~~~~ydps~SsT~~~~~---------------- 194 (453)
T 2bju_A 133 VDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGC--LTKHLYDSSKSRTYEKDG---------------- 194 (453)
T ss_dssp EEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTG--GGSCCBCGGGCTTCEEEE----------------
T ss_pred EecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCcccc--CCCCcCCCccCCceeECC----------------
Confidence 34578899999999999999999999999999999999986678 467899999999999987
Q ss_pred CCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecC--CC-C-CCCcceeeecCCCCCch------hh
Q 014537 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNG--GL-F-NSKTTGIVGLGGGDISL------IS 233 (423)
Q Consensus 164 ~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~--~~-~-~~~~~GilGLg~~~~sl------~~ 233 (423)
|.|.+.|++|+ +.|.+++|+|+||+. .++ +.|||+.... +. + ....+||||||++..+. +.
T Consensus 195 --~~~~i~YgdGs-~~G~~~~Dtv~ig~~-----~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~ 265 (453)
T 2bju_A 195 --TKVEMNYVSGT-VSGFFSKDLVTVGNL-----SLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVV 265 (453)
T ss_dssp --EEEEEECSSSE-EEEEEEEEEEEETTE-----EEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHH
T ss_pred --cEEEEEcCCCC-eEEEEEEEEEEEeCc-----EEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHH
Confidence 99999999998 469999999999986 888 9999999986 43 3 46789999999986542 23
Q ss_pred hh---hhcccCceEEEeccCC--CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecC
Q 014537 234 QM---RTTIAGKFSYCLVPVS--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSG 306 (423)
Q Consensus 234 ql---~~i~~~~Fs~~l~~~~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsG 306 (423)
+| +.+..++||+||.+.+ .|.|+||| ..++.|+ +.|+|+. .+++|.|+|+ |+|+++. . ....+|||||
T Consensus 266 ~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~-l~~~pv~-~~~~w~V~l~-I~Vgg~~-~-~~~~aIiDSG 340 (453)
T 2bju_A 266 ELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGP-LTYEKLN-HDLYWQITLD-AHVGNIM-L-EKANCIVDSG 340 (453)
T ss_dssp HHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEE-EEEEEEE-EETTEEEEEE-EEETTEE-E-EEEEEEECTT
T ss_pred HHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCc-eEEEecC-CCceEEEEEE-EEECcEE-e-ccccEEEcCC
Confidence 33 5577899999999863 39999999 3456665 9999999 7789999999 9999943 2 5678999999
Q ss_pred CcceecChhHHHHHHHHHHhhhccCcCCCC-CCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE
Q 014537 307 TTLTFLPQGYNSNLLSVMSSMIEAQPVADP-TGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV 383 (423)
Q Consensus 307 t~~~~lp~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~ 383 (423)
|+++++|++++++|.+++.+. ....+ .+.+ +|+. ..+|+|+|+|+|++++|++++|+++... +..|++
T Consensus 341 Tsl~~lP~~~~~~l~~~i~~~----~~~~g~~~~v-~C~~----~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 341 TSAITVPTDFLNKMLQNLDVI----KVPFLPFYVT-LCNN----SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp CCSEEECHHHHHHHTTTSSCE----ECTTSSCEEE-ETTC----TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred CCeEecCHHHHHHHHHHhCCc----ccCCCceEEE-ecCC----CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 999999999999998877543 11133 3434 5986 2689999999999999999999998753 468996
Q ss_pred -EEecC--CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 384 -FKGIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 384 -i~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|.+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 412 ~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 412 NIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 88765 3589999999999999999999999999986
No 21
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.6e-57 Score=441.37 Aligned_cols=300 Identities=22% Similarity=0.358 Sum_probs=256.2
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCC--CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCC
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP--PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQ 158 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~--~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~ 158 (423)
.++.+..+.+|+++|.||||||+++|++||||+++||+|..|. ...| ..++.|||++|+||+...
T Consensus 10 ~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C--~~~~~y~~~~SsT~~~~~----------- 76 (341)
T 3k1w_A 10 VILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTAC--VYHKLFDASDSSSYKHNG----------- 76 (341)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHH--HTSCCBCGGGCTTCEEEE-----------
T ss_pred ccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcc--cCCCCCCCCcCcCeeECC-----------
Confidence 3445567899999999999999999999999999999999997 3357 467899999999999876
Q ss_pred CCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCC-C-CCCcceeeecCCCCCc------
Q 014537 159 KSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGL-F-NSKTTGIVGLGGGDIS------ 230 (423)
Q Consensus 159 ~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~-~-~~~~~GilGLg~~~~s------ 230 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .+ ++.|||+...... + ....+||||||++..+
T Consensus 77 -------~~~~i~Yg~gs-~~G~~~~D~v~ig~~-----~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~ 142 (341)
T 3k1w_A 77 -------TELTLRYSTGT-VSGFLSQDIITVGGI-----TV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTP 142 (341)
T ss_dssp -------EEEEEEETTEE-EEEEEEEEEEEETTE-----EE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCC
T ss_pred -------CEEEEEECCcE-EEEEEEEEEEEECCc-----ee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCC
Confidence 99999999998 569999999999987 88 9999999988764 4 5678999999998765
Q ss_pred ----hhhhhhhcccCceEEEeccCC------CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEe-ccC
Q 014537 231 ----LISQMRTTIAGKFSYCLVPVS------STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVS 297 (423)
Q Consensus 231 ----l~~ql~~i~~~~Fs~~l~~~~------~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~ 297 (423)
+++| +.+..++||+||.+.. .|.|+||| ..++.|+ ++|+|+. ...+|.|++++|+|+++.+ ...
T Consensus 143 ~~~~l~~q-g~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~ 219 (341)
T 3k1w_A 143 IFDNIISQ-GVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN-FHYINLI-KTGVWQIQMKGVSVGSSTLLCED 219 (341)
T ss_dssp HHHHHHHH-TCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEE-EEEEECS-STTSCEEEECCEEETTEEEECTT
T ss_pred HHHHHHHC-CCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCc-eEEEecC-CCCEEEEEEeEEEECCEEeecCC
Confidence 3444 5678999999998875 39999999 4566665 9999999 7899999999999999864 345
Q ss_pred CCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeC-
Q 014537 298 TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS- 376 (423)
Q Consensus 298 ~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~- 376 (423)
...+||||||+++++|++++++|++++.+... ..+ +.++ |.... .+|+|+|+|+|++++|++++|+++..
T Consensus 220 ~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~----~~g-~~~~-C~~~~---~~p~i~f~f~g~~~~l~~~~~~~~~~~ 290 (341)
T 3k1w_A 220 GCLALVDTGASYISGSTSSIEKLMEALGAKKR----LFD-YVVK-CNEGP---TLPDISFHLGGKEYTLTSADYVFQESY 290 (341)
T ss_dssp CEEEEECTTCSSEEECHHHHHHHHHHHTCEEC----SSC-EEEE-GGGGG---GCCCEEEEETTEEEEECHHHHBCCSCC
T ss_pred CCEEEEECCCChhcCCHHHHHHHHHHcCCeec----CCC-eEEe-CCCCC---cCCcEEEEECCEEEEECHHHheeEccC
Confidence 67899999999999999999999999865432 123 5454 98654 68999999999999999999998754
Q ss_pred -CCeEEEE-EEec-----CCCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 377 -EDIVCSV-FKGI-----TNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 377 -~~~~C~~-i~~~-----~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
++..|++ |... ....||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 291 SSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp CTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 2578997 8763 25689999999999999999999999999985
No 22
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=1.5e-56 Score=434.13 Aligned_cols=299 Identities=22% Similarity=0.401 Sum_probs=253.5
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeee-----CCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccC
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQ-----CEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCAS 155 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~-----~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~ 155 (423)
..++...+..|+++|.||||||++.|++||||+++||+ |..|. .|. .++.|||++|+||+...
T Consensus 4 ~~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~--~C~--~~~~y~~~~SsT~~~~~-------- 71 (339)
T 3fv3_A 4 SLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV--DCK--SSGTFTPSSSSSYKNLG-------- 71 (339)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC--CTT--TTCCBCGGGCTTCEEEE--------
T ss_pred eeEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC--CCC--CCCcCCCccCcceeeCC--------
Confidence 45667778899999999999999999999999999998 44444 784 57899999999999987
Q ss_pred CCCCCCCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCCCCCcceeeecCCCCCc-----
Q 014537 156 LNQKSCSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDIS----- 230 (423)
Q Consensus 156 ~~~~~c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~s----- 230 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+..... .+||||||++..+
T Consensus 72 ----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~-----~~GilGLg~~~~~~~~~~ 131 (339)
T 3fv3_A 72 ----------AAFTIRYGDGSTSQGTWGKDTVTINGV-----SITGQQIADVTQTSV-----DQGILGIGYTSNEAVYDT 131 (339)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEESS-----SSCEEECSCGGGCCCBCT
T ss_pred ----------ceEEEEECCCceEEEEEEEEEEEECCE-----EECceEEEEEEecCC-----CceeEEecCccccccccc
Confidence 999999999988889999999999987 999999999998753 5899999997653
Q ss_pred -----------hhhhh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccE
Q 014537 231 -----------LISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQ 292 (423)
Q Consensus 231 -----------l~~ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~ 292 (423)
++.|| +.+.+++||+||.+... |.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++
T Consensus 132 ~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~ 209 (339)
T 3fv3_A 132 SGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGK-LVAEQVT-SSQALTISLASVNLKGS 209 (339)
T ss_dssp TSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSC-CEEEEBC-CSSSCEEEEEEEEESSC
T ss_pred cccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecc-eEEEecc-cCccEEEEEEEEEECCE
Confidence 44444 45678999999988643 9999999 6677776 9999999 67799999999999999
Q ss_pred EeccCCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEe-CcEEEeCCCce
Q 014537 293 RLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFR-GADVKLSRSNF 371 (423)
Q Consensus 293 ~~~~~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~-g~~~~l~~~~~ 371 (423)
.+ .....++|||||++++||++++++|++++.+.........+.+.+ +|+. ..+|+|+|+|+ |++++|++++|
T Consensus 210 ~~-~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~-~C~~----~~~p~i~f~f~~g~~~~v~~~~~ 283 (339)
T 3fv3_A 210 SF-SFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFI-DCNT----DTSGTTVFNFGNGAKITVPNTEY 283 (339)
T ss_dssp EE-EEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEE-CTTC----CCCSEEEEEETTSCEEEEEGGGG
T ss_pred ee-cCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEE-ecCC----CCCCcEEEEECCCCEEEECHHHh
Confidence 87 334789999999999999999999999998654321111233444 5985 15899999995 79999999999
Q ss_pred EEEeCCCeEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 372 FVKVSEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 372 ~~~~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
+++..+ ..|+. |.+ .+.||||++|||++|+|||++++|||||+++|++
T Consensus 284 ~~~~~~-~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~ 332 (339)
T 3fv3_A 284 VYQNGD-GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT 332 (339)
T ss_dssp EEECSS-SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS
T ss_pred eeeCCC-CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC
Confidence 988643 56866 887 4689999999999999999999999999999974
No 23
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=5.6e-57 Score=449.43 Aligned_cols=298 Identities=18% Similarity=0.303 Sum_probs=253.4
Q ss_pred cceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 014537 81 QADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (423)
Q Consensus 81 ~~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 160 (423)
.+..+..+.+|+++|.||||||++.|++||||+++||+|..|....| ..++.|||++|+||+...
T Consensus 129 ~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C--~~~~~ydps~SsT~~~~~------------- 193 (451)
T 3qvc_A 129 VELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESC--ESKNHYDSSKSKTYEKDD------------- 193 (451)
T ss_dssp CCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGG--TTSCCBCGGGCTTCEEEE-------------
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCcccc--CCCCCCCCCCCcccccCC-------------
Confidence 33445578899999999999999999999999999999999975578 567899999999999876
Q ss_pred CCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEe----cCCCC-CCCcceeeecCCCCCc-----
Q 014537 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTN----NGGLF-NSKTTGIVGLGGGDIS----- 230 (423)
Q Consensus 161 c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~----~~~~~-~~~~~GilGLg~~~~s----- 230 (423)
+.|.+.|++|+ +.|.+++|+|+||+. .++ +.||++.. .++ | ....+||||||++..+
T Consensus 194 -----~~f~i~YgdGs-~~G~~~~Dtv~igg~-----~v~-~~Fg~a~~t~~~~~~-f~~~~~dGILGLg~~~~s~~~~~ 260 (451)
T 3qvc_A 194 -----TPVKLTSKAGT-ISGIFSKDLVTIGKL-----SVP-YKFIEMTEIVGFEPF-YSESDVDGVFGLGWKDLSIGSID 260 (451)
T ss_dssp -----EEEEEECSSEE-EEEEEEEEEEEETTE-----EEE-EEEEEEEEEEECTTH-HHHSCCCEEEECSSBCSSSSCCC
T ss_pred -----CEEEEEECCCE-EEEEEEEEEEEECCE-----EEE-EEEEEEEeccccCCC-ccCCCCCEEEecCCCcccccCCC
Confidence 99999999998 669999999999987 888 99999998 655 5 4678999999998754
Q ss_pred -hhhhh---hhcccCceEEEeccCCC--ceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEE
Q 014537 231 -LISQM---RTTIAGKFSYCLVPVSS--TKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIV 302 (423)
Q Consensus 231 -l~~ql---~~i~~~~Fs~~l~~~~~--g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~i 302 (423)
++.+| +.+..++||+||.+... |.|+||| .+++.|+ +.|+|+. .+++|.|+++ |+|+++ ......+|
T Consensus 261 ~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~-l~~~pv~-~~~~w~v~l~-I~Vgg~--~~~~~~ai 335 (451)
T 3qvc_A 261 PYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGP-LNYEKLN-HDLMWQVDLD-VHFGNV--SSKKANVI 335 (451)
T ss_dssp CHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEE-EEEEECS-STTSSEEEEE-EEETTE--EEEEEEEE
T ss_pred CHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCc-eEEEEcc-cCCeeEEEEE-EEECCc--cCCCceEE
Confidence 33333 56788999999998754 9999999 4566665 9999999 8899999999 999998 35568899
Q ss_pred EecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeC--CCeE
Q 014537 303 IDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVS--EDIV 380 (423)
Q Consensus 303 iDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~--~~~~ 380 (423)
|||||+++++|++++++|.+++.+.... ..+.+.+ +|. .. .+|+|+|+|+|++++||+++|+++.. ++..
T Consensus 336 iDSGTt~i~lP~~~~~~i~~~i~a~~~~---~~g~y~v-~C~-~~---~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~ 407 (451)
T 3qvc_A 336 LDSATSVITVPTEFFNQFVESASVFKVP---FLSLYVT-TCG-NT---KLPTLEYRSPNKVYTLEPKQYLEPLENIFSAL 407 (451)
T ss_dssp ECTTBSSEEECHHHHHHHHTTTTCEECT---TSSCEEE-ETT-CT---TCCCEEEEETTEEEEECHHHHEEECTTTSTTE
T ss_pred EeCCCccccCCHHHHHHHHHHcCCeecC---CCCeEEe-eCC-cC---cCCcEEEEECCEEEEEcHHHheeecccCCCCe
Confidence 9999999999999999998888654221 1234444 488 32 68999999999999999999999865 3568
Q ss_pred EEE-EEecC--CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 381 CSV-FKGIT--NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 381 C~~-i~~~~--~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
|++ |.+.+ ...||||++|||++|+|||++++|||||+++
T Consensus 408 C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 408 CMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 987 88775 4789999999999999999999999999985
No 24
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.2e-56 Score=432.76 Aligned_cols=297 Identities=16% Similarity=0.258 Sum_probs=253.0
Q ss_pred eeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 014537 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (423)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~ 162 (423)
..+..+..|+++|.|| +|++.|+|||||+++||+|..|....|....++.|||++| ||+...
T Consensus 11 l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~~~~~y~~~~S-T~~~~~--------------- 72 (330)
T 1yg9_A 11 VHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCPNLQKYEKLKP-KYISDG--------------- 72 (330)
T ss_dssp EEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGSTTCCCCCCSSC-EEEEEE---------------
T ss_pred eecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcccccCccCCCCC-ceEECC---------------
Confidence 3455788999999999 9999999999999999999999755785456789999999 999876
Q ss_pred CCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC-CCCcceeeecCCCCCc-------hhhh
Q 014537 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF-NSKTTGIVGLGGGDIS-------LISQ 234 (423)
Q Consensus 163 ~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~-~~~~~GilGLg~~~~s-------l~~q 234 (423)
+.|.+.|++|+. .|.+++|+|+|++. .++++.|||+......| ....+||||||++..+ ++++
T Consensus 73 ---~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~-----~~~~~~fg~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~ 143 (330)
T 1yg9_A 73 ---NVQVKFFDTGSA-VGRGIEDSLTISQL-----TTSQQDIVLADELSQEVCILSADVVVGIAAPGCPNALKGKTVLEN 143 (330)
T ss_dssp ---EEEEEETTTEEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECTHHHHTTCSEEEECSCTTSCCTTSCCCHHHH
T ss_pred ---CEEEEEECCceE-EEEEEEEEEEECCE-----EEcCeEEEEEEEcccccccccCceEEEcCcchhccccCCCCHHHH
Confidence 999999999987 69999999999987 89999999999884334 4678999999998876 3333
Q ss_pred h---hhcccCceEEEeccCC----CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEec
Q 014537 235 M---RTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDS 305 (423)
Q Consensus 235 l---~~i~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDs 305 (423)
| +.+ .++||+||.+.. .|.|+||| ..++.|+ +.|+|+. ..++|.|+|++|+|+++.+......+||||
T Consensus 144 l~~qg~i-~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~aiiDS 220 (330)
T 1yg9_A 144 FVEENLI-APVFSIHHARFQDGEHFGEIIFGGSDWKYVDGE-FTYVPLV-GDDSWKFRLDGVKIGDTTVAPAGTQAIIDT 220 (330)
T ss_dssp HHHTTSS-CSEEEEEEEECTTSCEEEEEEETSCCGGGEEEE-EEEEEBS-CTTSCCEECSEEEETTEEEECTTCEEEECT
T ss_pred HHhcCCC-CceEEEEEcCCCCCCCCCEEEECCcCHHHccCc-eEEEECC-CCCEEEEEeCeEEECCEEEcCCCcEEEEec
Confidence 3 557 999999998862 39999999 3456665 9999999 889999999999999988755678999999
Q ss_pred CCcceecChhHHHHHHHHHHhhhccCcCCCC--CC-CcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEE
Q 014537 306 GTTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TG-SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCS 382 (423)
Q Consensus 306 Gt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~--~~-~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~ 382 (423)
||+++++|++++++|++++.+... ..+ .+ .++ |+... .+|+|+|+|+|++++|++++|+++. +..|+
T Consensus 221 GTs~~~lP~~~~~~l~~~~~~~~~----~~g~~~~~~~~-C~~~~---~~p~i~f~fgg~~~~l~~~~y~~~~--~~~C~ 290 (330)
T 1yg9_A 221 SKAIIVGPKAYVNPINEAIGCVVE----KTTTRRICKLD-CSKIP---SLPDVTFVINGRNFNISSQYYIQQN--GNLCY 290 (330)
T ss_dssp TCSSEEEEHHHHHHHHHHHTCEEE----ECSSCEEEEEC-GGGGG---GSCCEEEEETTEEEEECHHHHEEEE--TTEEE
T ss_pred CCccccCCHHHHHHHHHHhCCccc----CCCceEEEEEE-CCCcc---ccCcEEEEECCEEEEECHHHhcccC--CCcEE
Confidence 999999999999999999865421 122 34 454 98654 5899999999999999999999987 46899
Q ss_pred E-EEecC-CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 383 V-FKGIT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 383 ~-i~~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
+ |.+.+ ...||||++|||++|+|||++++|||||+++
T Consensus 291 ~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 291 SGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp ESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 7 87643 5689999999999999999999999999975
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-56 Score=428.89 Aligned_cols=300 Identities=19% Similarity=0.311 Sum_probs=250.8
Q ss_pred eeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 014537 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (423)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~ 162 (423)
.....+.+|+++|.|| +|++.|+|||||+++||+|.+|. .|..+.++.|||++|+ ++...
T Consensus 8 ~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~--------------- 67 (325)
T 1ibq_A 8 TPQNNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP--SSEQTGHDLYTPSSSA-TKLSG--------------- 67 (325)
T ss_dssp EECTTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC--HHHHTTSCCCBCCSSC-EECTT---------------
T ss_pred EEcCCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC--ccccCCCCCCCchhcC-CccCC---------------
Confidence 3345788999999999 99999999999999999999998 6655778999999999 65444
Q ss_pred CCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc---------h
Q 014537 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------L 231 (423)
Q Consensus 163 ~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------l 231 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+....+.+ ....+||||||++..+ +
T Consensus 68 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~ 139 (325)
T 1ibq_A 68 ---YSWDISYGDGSSASGDVYRDTVTVGGV-----TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTF 139 (325)
T ss_dssp ---CBEEEECSSSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCH
T ss_pred ---CEEEEEeCCCCEEEEEEEEeEEEECCE-----EEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCH
Confidence 999999999997779999999999986 89999999999876644 2578999999997654 4
Q ss_pred hhhhh-hcccCceEEEeccCCCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCc
Q 014537 232 ISQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTT 308 (423)
Q Consensus 232 ~~ql~-~i~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~ 308 (423)
++||. .+..++||+||.+...|.|+||| .+++.|+ +.|+|+.+..++|.|+|++|+|+++.+......+||||||+
T Consensus 140 ~~~l~~~i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt 218 (325)
T 1ibq_A 140 FDTVKSQLDSPLFAVQLKHDAPGVYDFGYIDDSKYTGS-ITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTT 218 (325)
T ss_dssp HHHHGGGSSSSEEEEEEETTEEEEEEESSCCGGGBSSC-CEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEEECTTCC
T ss_pred HHHHHHhcCCcEEEEEecCCCCceEEECCcChhhccCc-eEEEEcCCCCceEEEEECcEEECCeeccCCCceEEEeCCCC
Confidence 45654 36789999999875449999999 3466665 99999974468999999999999987755678999999999
Q ss_pred ceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-EE
Q 014537 309 LTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FK 385 (423)
Q Consensus 309 ~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~ 385 (423)
++++|++++++|++++.+..... ..+.+.+ +|+. .+|+|+|+|+|++++||+++|+++..+ ...|++ |.
T Consensus 219 ~~~lP~~~~~~i~~~i~~a~~~~--~~g~~~~-~C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~ 290 (325)
T 1ibq_A 219 LILLDDEIVSAYYEQVSGAQESY--EAGGYVF-SCST-----DLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQ 290 (325)
T ss_dssp SEEECHHHHHHHHTTSTTCBCCS--SSSSCEE-ETTC-----CCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEE
T ss_pred cEeCCHHHHHHHHHhCCCceEcC--cCCeEEE-EcCC-----CCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEE
Confidence 99999999999988874332111 1234445 4983 689999999999999999999887532 378998 87
Q ss_pred ecC-CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 386 GIT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 386 ~~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 291 ~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 291 SNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp ECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 764 5789999999999999999999999999974
No 26
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=2.8e-56 Score=428.88 Aligned_cols=298 Identities=17% Similarity=0.286 Sum_probs=249.7
Q ss_pred eecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCC
Q 014537 84 IIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSG 163 (423)
Q Consensus 84 ~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~ 163 (423)
....+.+|+++|.|| ||++.|+|||||+++||+|.+|. .|..+.++.|||++|+ ++...
T Consensus 10 ~~~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~---------------- 68 (323)
T 1izd_A 10 PTSNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP--SSERSGHDYYTPGSSA-QKIDG---------------- 68 (323)
T ss_dssp ECGGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTCCCBCCCTTC-EEEEE----------------
T ss_pred EcCCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC--cccccCCCCCCccccC-CccCC----------------
Confidence 345678999999999 89999999999999999999998 6655678999999999 66444
Q ss_pred CCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc---------hh
Q 014537 164 VNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------LI 232 (423)
Q Consensus 164 ~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------l~ 232 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||++...+.+ ....+||||||++.++ ++
T Consensus 69 --~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~ 141 (323)
T 1izd_A 69 --ATWSISYGDGSSASGDVYKDKVTVGGV-----SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFF 141 (323)
T ss_dssp --EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHH
T ss_pred --CeEEEEcCCCCeEEEEEEEEEEEECCE-----EECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHH
Confidence 999999999997779999999999987 89999999999876644 3678999999997654 34
Q ss_pred hhhh-hcccCceEEEeccCCCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCcc
Q 014537 233 SQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTL 309 (423)
Q Consensus 233 ~ql~-~i~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~ 309 (423)
++|. .+..++||+||.+...|.|+||| ..++.|+ +.|+|+.+..++|.|+|++|+|++ .+......+||||||++
T Consensus 142 ~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~ 219 (323)
T 1izd_A 142 DNVKSSLSEPIFAVALKHNAPGVYDFGYTDSSKYTGS-ITYTDVDNSQGFWGFTADGYSIGS-DSSSDSITGIADTGTTL 219 (323)
T ss_dssp HHHGGGSSSSEEEEECCTTSCEEEEESSCCTTSEEEE-EEEEECBCTTSSCEEEESEEEETT-EEECCCEEEEECTTCCS
T ss_pred HHHHHhccCcEEEEEccCCCCCEEEECCcCccccccc-eEEEECCCCCceEEEEECeEEECC-cccCCCceEEEeCCCcc
Confidence 4443 35789999999886559999999 4556665 999999734689999999999999 66566789999999999
Q ss_pred eecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCCCeEEEE-EEecC
Q 014537 310 TFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSEDIVCSV-FKGIT 388 (423)
Q Consensus 310 ~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~~~~C~~-i~~~~ 388 (423)
+++|++++++|.+++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|+++..++..|++ |.+.+
T Consensus 220 ~~lp~~~~~~i~~~i~ga~~~~--~~g~~~~~-C~~-----~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~C~~~i~~~~ 291 (323)
T 1izd_A 220 LLLDDSIVDAYYEQVNGASYDS--SQGGYVFP-SSA-----SLPDFSVTIGDYTATVPGEYISFADVGNGQTFGGIQSNS 291 (323)
T ss_dssp EEECHHHHHHHHTTSTTCEEET--TTTEEEEE-TTC-----CCCCEEEEETTEEEEECHHHHEEEECSTTEEEESEEECT
T ss_pred eeCCHHHHHHHHHhCCCcEEcC--cCCEEEEE-CCC-----CCceEEEEECCEEEecCHHHeEEecCCCCeEEEEEEcCC
Confidence 9999999999988875322111 12344454 883 689999999999999999999988655678998 88764
Q ss_pred -CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 389 -NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 389 -~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
.+.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 292 GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 5789999999999999999999999999874
No 27
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5e-56 Score=427.27 Aligned_cols=298 Identities=21% Similarity=0.362 Sum_probs=248.4
Q ss_pred eeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCC
Q 014537 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCS 162 (423)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~ 162 (423)
.....+.+|+++|.|| +|++.|+|||||+++||+|.+|. .|..+.++.|||++|+ ++...
T Consensus 9 ~~~~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~--~~~c~~~~~y~~~~Ss-~~~~~--------------- 68 (323)
T 1bxo_A 9 TPTANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP--ASQQSGHSVYNPSATG-KELSG--------------- 68 (323)
T ss_dssp EECGGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC--HHHHTTSCCBCHHHHC-EEEEE---------------
T ss_pred eecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC--chhccCCCCCCcccCC-cccCC---------------
Confidence 3345678999999999 99999999999999999999998 6655778999999998 76544
Q ss_pred CCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc---------h
Q 014537 163 GVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS---------L 231 (423)
Q Consensus 163 ~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s---------l 231 (423)
|.|.+.|++|+.+.|.+++|+|+|++. .++++.|||+...++.+ ....+||||||++..+ +
T Consensus 69 ---~~~~i~Yg~Gs~~~G~~~~D~v~ig~~-----~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~ 140 (323)
T 1bxo_A 69 ---YTWSISYGDGSSASGNVFTDSVTVGGV-----TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTF 140 (323)
T ss_dssp ---EEEEEECTTSCEEEEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCH
T ss_pred ---CeEEEEeCCCCeEEEEEEEEEEEECCE-----EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCH
Confidence 999999999997779999999999987 89999999999876644 2578999999997654 3
Q ss_pred hhhhh-hcccCceEEEeccCCCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCc
Q 014537 232 ISQMR-TTIAGKFSYCLVPVSSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTT 308 (423)
Q Consensus 232 ~~ql~-~i~~~~Fs~~l~~~~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~ 308 (423)
+++|. .+..++||+||.+...|.|+||| .+++.|+ +.|+|+.+..++|.|+|++|+|++ +......+||||||+
T Consensus 141 ~~~l~~~i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~aiiDSGTs 217 (323)
T 1bxo_A 141 FDTVKSSLAQPLFAVALKHQQPGVYDFGFIDSSKYTGS-LTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFSGIADTGTT 217 (323)
T ss_dssp HHHHGGGBSSSEEEEECCSSSCEEEEESSCCGGGBSSC-CEEEECBCTTSSCEEEEEEEEETT--EEEEEEEEEECTTCS
T ss_pred HHHHHHhcCCcEEEEEEeCCCCceEEEeCcChhhccCc-eEEEECCCCCCeEEEEEeeEEECC--ccCCCceEEEeCCCC
Confidence 44543 36789999999875559999999 3466665 999999734689999999999999 335567899999999
Q ss_pred ceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC-CeEEEE-EEe
Q 014537 309 LTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE-DIVCSV-FKG 386 (423)
Q Consensus 309 ~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~-~~~C~~-i~~ 386 (423)
++++|++++++|++++.+..... ..+.+.++ |+. .+|+|+|+|+|++++||+++|+++..+ +..|++ |.+
T Consensus 218 ~~~lP~~~~~~l~~~i~~a~~~~--~~g~~~~~-C~~-----~~P~i~f~fgg~~~~l~~~~~~~~~~~~~~~C~~~i~~ 289 (323)
T 1bxo_A 218 LLLLDDSVVSQYYSQVSGAQQDS--NAGGYVFD-CST-----NLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQS 289 (323)
T ss_dssp SEEECHHHHHHHHTTSTTCEEET--TTTEEEEC-TTC-----CCCCEEEEETTEEEEECHHHHEEEECSSSSCEEESEEE
T ss_pred ceeCCHHHHHHHHHhCCCceEcC--cCCEEEEE-CCC-----CCceEEEEECCEEEEECHHHeEEeccCCCCeEEEEEEC
Confidence 99999999999988874432111 12334444 883 689999999999999999999887643 468999 887
Q ss_pred cC-CCcceechhhhcceEEEEECCCCEEEEeeCC
Q 014537 387 IT-NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTD 419 (423)
Q Consensus 387 ~~-~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~ 419 (423)
.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 290 NSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp CTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 64 5689999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-53 Score=420.34 Aligned_cols=303 Identities=23% Similarity=0.379 Sum_probs=243.3
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCC
Q 014537 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (423)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~~ 165 (423)
..+..|+++|.||||+|++.|+|||||+++||+|.+|. .| ++.|||++|+||+...
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~--~~----~~~f~~~~SsT~~~~~------------------ 65 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS--YI----DTYFDTERSSTYRSKG------------------ 65 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT--TB----SCCCCGGGCTTCEEEE------------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC--cc----ccCcccccCccceeCC------------------
Confidence 34567999999999999999999999999999999887 55 5789999999999987
Q ss_pred ceeeEEcCCCCeeeEEEEEEEEEecCCCCCceec-CceEEEeEEecCCCC--CCCcceeeecCCCCCc------------
Q 014537 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVAL-PGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------------ 230 (423)
Q Consensus 166 ~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~-~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s------------ 230 (423)
|.|.+.|++|+. .|.+++|+|+|++.. .. ..+.|++..+..+.| ....+||||||++.++
T Consensus 66 ~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~ 140 (383)
T 2ewy_A 66 FDVTVKYTQGSW-TGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDS 140 (383)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHH
T ss_pred ceEEEEECCcEE-EEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHH
Confidence 999999999986 599999999998641 11 135688876655544 2578999999997653
Q ss_pred hhhhhhhcccCceEEEeccC---------CCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec--c-
Q 014537 231 LISQMRTTIAGKFSYCLVPV---------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--V- 296 (423)
Q Consensus 231 l~~ql~~i~~~~Fs~~l~~~---------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~- 296 (423)
+++| +.+ .++||+||.+. ..|.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+. .
T Consensus 141 l~~q-~~i-~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~~~~~ 216 (383)
T 2ewy_A 141 LVTQ-ANI-PNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGD-IWYTPIK-EEWYYQIEILKLEIGGQSLNLDCR 216 (383)
T ss_dssp HHHH-HTC-CSCEEEEECCC---------CCEEEEETSCCGGGCCSC-EEEEECS-SBTTBBCCEEEEEETTEECCCCTT
T ss_pred HHHc-cCC-CcceEEEeeccccccccCCCCCeEEEeCccchhhccCc-cEEEecC-CCceEEEEEEEEEECCEEcccccc
Confidence 5566 455 78999999641 129999999 3456665 9999999 67899999999999999872 1
Q ss_pred --CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCC--CCcccccccCCC--CCCCeEEEEEeCc------EE
Q 014537 297 --STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPT--GSLELCYSFNSL--SQVPEVTIHFRGA------DV 364 (423)
Q Consensus 297 --~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~--~~~P~i~~~f~g~------~~ 364 (423)
....+||||||+++++|++++++|++++.+.........+. ....+|+..... ..+|+|+|+|+|. ++
T Consensus 217 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~ 296 (383)
T 2ewy_A 217 EYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRI 296 (383)
T ss_dssp TTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEE
T ss_pred ccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEE
Confidence 14689999999999999999999999998865432111111 113359875321 2589999999984 79
Q ss_pred EeCCCceEEEeC---CCeEEEE--EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 365 KLSRSNFFVKVS---EDIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 365 ~l~~~~~~~~~~---~~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
+|++++|+.+.. .+..|++ +.+. ...||||++|||++|+|||++++|||||+++|+.
T Consensus 297 ~l~~~~yi~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 358 (383)
T 2ewy_A 297 TILPQLYIQPMMGAGLNYECYRFGISPS-TNALVIGATVMEGFYVIFDRAQKRVGFAASPCAE 358 (383)
T ss_dssp EECHHHHEEEECCCTTCSEEEEESEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEECTTCB
T ss_pred EEChHHheeecccCCCCceeEEEEecCC-CCcEEEChHHhCCeeEEEECCCCeEEEEeccCCC
Confidence 999999998864 3568986 4544 5689999999999999999999999999999963
No 29
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.1e-53 Score=429.42 Aligned_cols=304 Identities=21% Similarity=0.381 Sum_probs=244.6
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCC
Q 014537 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (423)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~~ 165 (423)
..+..|+++|.||||+|+|+|+|||||+++||+|.+| | ..++.|||++|+||+...
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c----c--~~~~~y~~~~SsT~~~~~------------------ 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH----P--FLHRYYQRQLSSTYRDLR------------------ 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC----T--TCSCCCCGGGCTTCEEEE------------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc----c--ccCCcccCCCCCCcccCC------------------
Confidence 4566899999999999999999999999999999987 4 467899999999999987
Q ss_pred ceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCC--CCCcceeeecCCCCCc------------h
Q 014537 166 CQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLF--NSKTTGIVGLGGGDIS------------L 231 (423)
Q Consensus 166 ~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s------------l 231 (423)
|.|.+.|++|+. .|.+++|+|+|++.. .+.+ .+.|+++......| ....+||||||++.++ +
T Consensus 127 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--~~~~-~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 202 (455)
T 3lpj_A 127 KGVYVPYTQGKW-EGELGTDLVSIPHGP--NVTV-RANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 202 (455)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC--SCEE-EEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred ccEEEEeCCeEE-EEEEEEEEEEECCCc--ceee-EEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHH
Confidence 999999999987 599999999998521 0122 35688888776655 3678999999997654 3
Q ss_pred hhhhhhcccCceEEEeccC------------CCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEecc-
Q 014537 232 ISQMRTTIAGKFSYCLVPV------------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV- 296 (423)
Q Consensus 232 ~~ql~~i~~~~Fs~~l~~~------------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~- 296 (423)
++| +.+. ++||+||.+. ..|.|+||| ..++.|+ +.|+|+. ...+|.|++++|+|+++.+..
T Consensus 203 ~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~ 278 (455)
T 3lpj_A 203 VKQ-THVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLKMD 278 (455)
T ss_dssp HHH-SCCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEE-EEEEECC-SBTTBBCCEEEEEETTEECCCC
T ss_pred HHc-cCCC-ceeEEEeccccccccccccccCCCceEEECCcCcccccCc-eEEEecC-CCceeEEEEeEEEECCEEcccc
Confidence 344 4454 8999999752 239999999 4566665 9999999 788999999999999998731
Q ss_pred ----CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCC--CCCcccccccCCC--CCCCeEEEEEeCc------
Q 014537 297 ----STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADP--TGSLELCYSFNSL--SQVPEVTIHFRGA------ 362 (423)
Q Consensus 297 ----~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~C~~~~~~--~~~P~i~~~f~g~------ 362 (423)
....+||||||+++++|++++++|++++.+.......... .....+|+..... ..+|+|+|+|+|.
T Consensus 279 ~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~ 358 (455)
T 3lpj_A 279 CKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSF 358 (455)
T ss_dssp GGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEE
T ss_pred ccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceE
Confidence 2578999999999999999999999999987542221111 1113359976421 1389999999986
Q ss_pred EEEeCCCceEEEeCCC----eEEEEE--EecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 363 DVKLSRSNFFVKVSED----IVCSVF--KGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 363 ~~~l~~~~~~~~~~~~----~~C~~i--~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
+|+|++++|+++..+. ..|+++ ... ...||||++|||++|+|||++++|||||+++|+.
T Consensus 359 ~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 423 (455)
T 3lpj_A 359 RITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 423 (455)
T ss_dssp EEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred EEEECHHHheEeccCCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEeccccc
Confidence 4999999999987542 589973 332 5789999999999999999999999999999975
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2e-53 Score=420.39 Aligned_cols=301 Identities=21% Similarity=0.393 Sum_probs=242.2
Q ss_pred cCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCC
Q 014537 86 PNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVN 165 (423)
Q Consensus 86 ~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~~ 165 (423)
..+..|+++|.||||+|++.|+|||||+++||+|.+|. .| ++.|||++|+||+...
T Consensus 18 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~--~~----~~~y~~~~SsT~~~~~------------------ 73 (395)
T 2qp8_A 18 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP--FL----HRYYQRQLSSTYRDLR------------------ 73 (395)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT--TC----SCCCCGGGCTTCEEEE------------------
T ss_pred CCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc--cc----cCCcCcccCCCceeCC------------------
Confidence 35678999999999999999999999999999999886 44 6789999999999987
Q ss_pred ceeeEEcCCCCeeeEEEEEEEEEecC-CCCCceecC-ceEEEeEEecCCCC--CCCcceeeecCCCCCc-----------
Q 014537 166 CQYSVSYGDGSFSNGNLATETVTLGS-TTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS----------- 230 (423)
Q Consensus 166 ~~~~~~Yg~g~~~~G~~~~D~v~ig~-~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s----------- 230 (423)
|.|.+.|++|+. .|.+++|+|+|++ . .++ .+.|++..+....| ....+||||||++.++
T Consensus 74 ~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~-----~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~ 147 (395)
T 2qp8_A 74 KGVYVPYTQGKW-EGELGTDLVSIPHGP-----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFD 147 (395)
T ss_dssp EEEEEECSSCEE-EEEEEEEEEECTTSC-----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHH
T ss_pred ceEEEEECCcEE-EEEEEeEEEEECCCC-----CceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHH
Confidence 999999999987 5999999999984 3 222 35678777655544 3578999999997653
Q ss_pred -hhhhhhhcccCceEEEeccC------------CCceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec
Q 014537 231 -LISQMRTTIAGKFSYCLVPV------------SSTKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG 295 (423)
Q Consensus 231 -l~~ql~~i~~~~Fs~~l~~~------------~~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~ 295 (423)
+++| +.+. ++||+||.+. ..|.|+||| ..++.|+ +.|+|+. ...+|.|+|++|+|+++.+.
T Consensus 148 ~l~~q-~~i~-~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 223 (395)
T 2qp8_A 148 SLVKQ-THVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLK 223 (395)
T ss_dssp HHHHH-SCCC-SCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEE-EEEEECC-SBTTBBCCEEEEEETTEECC
T ss_pred HHHHc-cCCc-ceEEEEeccccccccccccccCCCcEEEECCcCcccccCc-eEEeccC-CCceEEEEEEEEEECCEEcc
Confidence 4445 4454 8999999752 239999999 3456665 9999999 67899999999999999872
Q ss_pred --c---CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCC---CCCcccccccCCC--CCCCeEEEEEeCc---
Q 014537 296 --V---STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADP---TGSLELCYSFNSL--SQVPEVTIHFRGA--- 362 (423)
Q Consensus 296 --~---~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~C~~~~~~--~~~P~i~~~f~g~--- 362 (423)
. ....+||||||+++++|++++++|++++.+.........+ .+.+ +|+..... ..+|+|+|+|+|.
T Consensus 224 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~-~C~~~~~~~~~~~P~i~f~f~g~~~~ 302 (395)
T 2qp8_A 224 MDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQL-VCWQAGTTPWNIFPVISLYLMGEVTN 302 (395)
T ss_dssp CCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSC-EEESTTCCCGGGSCCEEEEEECSSTT
T ss_pred cCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccc-cccccccchHhhCCcEEEEEccCCCC
Confidence 1 2468999999999999999999999999886543211111 1123 59875421 2589999999985
Q ss_pred ---EEEeCCCceEEEeCC----CeEEEE--EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 363 ---DVKLSRSNFFVKVSE----DIVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 363 ---~~~l~~~~~~~~~~~----~~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
+|+|++++|+++..+ ...|++ +.+. ...||||++|||++|+|||++++|||||+++|+.
T Consensus 303 ~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 370 (395)
T 2qp8_A 303 QSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 370 (395)
T ss_dssp EEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-SSCEEECHHHHTTEEEEEETTTTEEEEEEETTCC
T ss_pred ceEEEEECHHHhEeecccCCCCCceEEEEEecCC-CCcEEEChHHhCCeeEEEECCCCEEEEEeccCCC
Confidence 699999999988643 358974 5554 5689999999999999999999999999999975
No 31
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5e-53 Score=418.65 Aligned_cols=303 Identities=20% Similarity=0.370 Sum_probs=242.5
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCCCCCCc
Q 014537 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSCSGVNC 166 (423)
Q Consensus 87 ~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c~~~~~ 166 (423)
.+..|+++|.||||+|+++|+|||||+++||+|.+|. ..++.|||++|+||+... |
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~------~~~~~y~~~~SsT~~~~~------------------~ 81 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP------FLHRYYQRQLSSTYRDLR------------------K 81 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT------TCSCCCCGGGCTTCEEEE------------------E
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCCC------cccCCcCcccCcccccCC------------------C
Confidence 3568999999999999999999999999999999873 457899999999999987 9
Q ss_pred eeeEEcCCCCeeeEEEEEEEEEecCCCCCceecC-ceEEEeEEecCCCC--CCCcceeeecCCCCCc--------hhhhh
Q 014537 167 QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALP-GITFGCGTNNGGLF--NSKTTGIVGLGGGDIS--------LISQM 235 (423)
Q Consensus 167 ~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~-~~~fg~~~~~~~~~--~~~~~GilGLg~~~~s--------l~~ql 235 (423)
.|.+.|++|+. .|.+++|+|+|++.. .++ .+.|+++......+ ....+||||||++..+ ++.+|
T Consensus 82 ~~~i~Yg~Gs~-~G~~~~D~v~ig~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L 156 (402)
T 3vf3_A 82 GVYVPYTQGKW-EGELGTDLVSIPHGP----NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSL 156 (402)
T ss_dssp EEEEECSSCEE-EEEEEEEEEECTTSC----SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHH
T ss_pred EEEEEECcEEE-EEEEEEEEEEECCcc----ccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHH
Confidence 99999999986 699999999998531 222 24478777766554 3678999999997653 33333
Q ss_pred ---hhcccCceEEEeccC----------C--CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEecc--
Q 014537 236 ---RTTIAGKFSYCLVPV----------S--STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLGV-- 296 (423)
Q Consensus 236 ---~~i~~~~Fs~~l~~~----------~--~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~~-- 296 (423)
+.+. ++||+||.+. . .|.|+||| ..++.|+ ++|+|+. ...+|.|+|++|+|+++.+..
T Consensus 157 ~~q~~i~-~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~w~v~l~~i~v~g~~~~~~~ 233 (402)
T 3vf3_A 157 VKQTHVP-NLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGS-LWYTPIR-REWYYEVIIVRVEINGQDLKMDC 233 (402)
T ss_dssp HHHSCCC-SCEEEEECCCC-------------EEEEESSCCGGGEEEE-EEEEECS-SBTTBEECEEEEEETTEECCCCG
T ss_pred HHccCCc-cceEEEeecccccccccccccCCCCEEEeCCcCcccccCc-eEEEeCC-cCcEEEEEEeEEEECCEEecccc
Confidence 4454 8999999742 1 29999999 4456664 9999999 788999999999999998731
Q ss_pred ---CCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCC--CcccccccCCC--CCCCeEEEEEeCc------E
Q 014537 297 ---STPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTG--SLELCYSFNSL--SQVPEVTIHFRGA------D 363 (423)
Q Consensus 297 ---~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~C~~~~~~--~~~P~i~~~f~g~------~ 363 (423)
....+||||||+++++|.+++++|++++.+...........+ ...+|+..... ..+|+|+|+|+|. +
T Consensus 234 ~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~ 313 (402)
T 3vf3_A 234 KEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFR 313 (402)
T ss_dssp GGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEE
T ss_pred cccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEEecCCCCceEE
Confidence 257899999999999999999999999998754222212211 13469976421 2589999999985 4
Q ss_pred EEeCCCceEEEeCCC----eEEEE--EEecCCCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 364 VKLSRSNFFVKVSED----IVCSV--FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 364 ~~l~~~~~~~~~~~~----~~C~~--i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
++|++++|+++..+. ..|++ +... ...||||++|||++|+|||++++|||||+++|+.
T Consensus 314 ~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~ 377 (402)
T 3vf3_A 314 ITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGAVIMEGFYVVFDRARKRIGFAVSACHV 377 (402)
T ss_dssp EEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCC
T ss_pred EEECHHHheehhccCCCCCceEEEEeccCC-CCcEEEChHHhCCeEEEEECCCCEEEEEecccCc
Confidence 999999999986542 58986 3333 5789999999999999999999999999999985
No 32
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.9e-53 Score=410.25 Aligned_cols=291 Identities=21% Similarity=0.371 Sum_probs=235.7
Q ss_pred ceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCCC
Q 014537 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKSC 161 (423)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~c 161 (423)
.++...+..|+++|.||||+|++.|+|||||+++||+|. +.|||++|+++..
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------~~y~~s~Ss~~~~---------------- 56 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------KSYVKTSTSSATS---------------- 56 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------SCCCCCTTCEEEE----------------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------CccCCcCCccccC----------------
Confidence 345555779999999999999999999999999999543 4789988886543
Q ss_pred CCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCCCCCCCcceeeecCCCCCch----------
Q 014537 162 SGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGGLFNSKTTGIVGLGGGDISL---------- 231 (423)
Q Consensus 162 ~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~~~~~~~~GilGLg~~~~sl---------- 231 (423)
|.|.+.|++|+ +.|.+++|+|+|++. .++++.|||+....+ | ...+||||||++.+++
T Consensus 57 ----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~-----~v~~~~fg~~~~~~~-~-~~~~GilGLg~~~~s~~~~~~~~~~~ 124 (340)
T 1wkr_A 57 ----DKVSVTYGSGS-FSGTEYTDTVTLGSL-----TIPKQSIGVASRDSG-F-DGVDGILGVGPVDLTVGTLSPHTSTS 124 (340)
T ss_dssp ----EEEEEECSSCE-EEEEEEEEEEEETTE-----EEEEEEEEEEEEEES-C-TTCSEEEECSCGGGGTTSEESCTTCC
T ss_pred ----ceEEEEECCcE-EEEEEEEEEEEECCE-----EEcceEEEEEEccCC-C-cCCCcEEECCcccccccccccccccc
Confidence 99999999998 569999999999986 899999999998654 4 4689999999976543
Q ss_pred ----hhhh---hhcccCceEEEeccCC-----CceeeeCC--CCccCCCCeEEeeccC---CCCceEEEeEEEEecc-EE
Q 014537 232 ----ISQM---RTTIAGKFSYCLVPVS-----STKINFGT--NGIVSGPGVVSTPLTK---AKTFYVLTIDAISVGN-QR 293 (423)
Q Consensus 232 ----~~ql---~~i~~~~Fs~~l~~~~-----~g~l~fGg--~~~~~g~~~~~~p~~~---~~~~w~v~l~~i~v~~-~~ 293 (423)
+.+| +.+.+++||+||.+.. .|.|+||| ..++.|+ +.|+|+.. ...+|.|+ ++|+|++ +.
T Consensus 125 ~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~ 202 (340)
T 1wkr_A 125 IPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGS-ITYTPITSTSPASAYWGIN-QSIRYGSSTS 202 (340)
T ss_dssp CCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSC-CEEEECCSSTTGGGSSEEE-EEEEETTTEE
T ss_pred CCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccc-eEEEECccCCCCcceEEEE-eeEEECCCeE
Confidence 3333 4567899999998642 29999999 3456665 99999992 17899999 9999998 77
Q ss_pred eccCCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCCCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEE
Q 014537 294 LGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTGSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFV 373 (423)
Q Consensus 294 ~~~~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~ 373 (423)
+. ....+||||||+++++|++++++|.+++.+..... .+.+.+ +|.... .+|+|+|+|+|++++|++++|++
T Consensus 203 l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~---~g~~~~-~C~~~~---~~p~i~f~f~g~~~~i~~~~yi~ 274 (340)
T 1wkr_A 203 IL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVADNN---TGLLRL-TTAQYA---NLQSLFFTIGGQTFELTANAQIW 274 (340)
T ss_dssp EE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT---TSSEEE-CHHHHH---TCCCEEEEETTEEEEECTGGGBC
T ss_pred cc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC---CCeEEe-eccccc---cCCcEEEEECCEEEEEcHHHhcc
Confidence 62 34689999999999999999999988876543211 233444 487543 58999999999999999999987
Q ss_pred EeC-------CCeEEEE-EEecC-----CCcceechhhhcceEEEEECCCCEEEEeeCCCCC
Q 014537 374 KVS-------EDIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQQTVSFKPTDCTK 422 (423)
Q Consensus 374 ~~~-------~~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c~~ 422 (423)
+.. ....|+. |.+.+ +..||||++|||++|+|||++++|||||+++|++
T Consensus 275 ~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~ 336 (340)
T 1wkr_A 275 PRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTT 336 (340)
T ss_dssp CGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTT
T ss_pred ccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCC
Confidence 653 1246765 76522 2469999999999999999999999999999975
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.8e-52 Score=411.37 Aligned_cols=311 Identities=22% Similarity=0.437 Sum_probs=239.5
Q ss_pred ecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCccccCC---CCCCC
Q 014537 85 IPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPPSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASL---NQKSC 161 (423)
Q Consensus 85 ~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~---~~~~c 161 (423)
+..+.+|+++|.|||| |+|||||+++||+|.+|. +|+..+|.++.|... ....|
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~------------------~~~~~~C~s~~C~~~~~~~~~sc 66 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ------------------PPAEIPCSSPTCLLANAYPAPGC 66 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC------------------CCCCCBTTSHHHHHHHSSCCTTC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC------------------CCCccCCCCchhccccCCCCCCC
Confidence 4567899999999997 999999999999987553 234455665555421 11233
Q ss_pred C---------CCCc-eeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCce----EEEeEEecCC-CCCCCcceeeecCC
Q 014537 162 S---------GVNC-QYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGI----TFGCGTNNGG-LFNSKTTGIVGLGG 226 (423)
Q Consensus 162 ~---------~~~~-~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~----~fg~~~~~~~-~~~~~~~GilGLg~ 226 (423)
. +..| .|.+.|++|+.+.|.+++|+|+|++.++. +.++++ .|||+..... .+....|||||||+
T Consensus 67 ~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~-~~v~~~~~~~~Fg~~~~~~~~~~~~~~dGIlGLg~ 145 (381)
T 1t6e_X 67 PAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGS-KPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLAN 145 (381)
T ss_dssp CCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSS-SEEEEEEEEEEEEECCGGGGTTSCTTEEEEEECSS
T ss_pred CCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCC-ccccceeeeeEeecCcccccCCCCCCCceEEEeCC
Confidence 2 1136 59999999998779999999999964321 155554 6799987632 22468899999999
Q ss_pred CCCchhhhhhh--cccCceEEEeccCCCceeeeCCCCc----cCCCCeEEeecc-C-CCCceEEEeEEEEeccEEecc--
Q 014537 227 GDISLISQMRT--TIAGKFSYCLVPVSSTKINFGTNGI----VSGPGVVSTPLT-K-AKTFYVLTIDAISVGNQRLGV-- 296 (423)
Q Consensus 227 ~~~sl~~ql~~--i~~~~Fs~~l~~~~~g~l~fGg~~~----~~g~~~~~~p~~-~-~~~~w~v~l~~i~v~~~~~~~-- 296 (423)
+.+++.+||.. +..++||+||.+...|+|+|||.+. +.++ +.|+|++ + ...+|.|+|++|+||++.+..
T Consensus 146 ~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~-l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~ 224 (381)
T 1t6e_X 146 SGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQS-MPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE 224 (381)
T ss_dssp STTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTT-CCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred CcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCc-ceeeccccCCCCcceEEEEEEEEEcCEEecCCH
Confidence 99999998864 4679999999886459999999432 4554 9999998 2 235677999999999988731
Q ss_pred C---CCcEEEecCCcceecChhHHHHHHHHHHhhhcc--------CcCCCCCCCcccccccCCC------CCCCeEEEEE
Q 014537 297 S---TPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEA--------QPVADPTGSLELCYSFNSL------SQVPEVTIHF 359 (423)
Q Consensus 297 ~---~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~--------~~~~~~~~~~~~C~~~~~~------~~~P~i~~~f 359 (423)
. .+++||||||++++||+++|++|.+++.+++.. .+.......+..|+..+.. ..+|+|+|+|
T Consensus 225 ~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~f~f 304 (381)
T 1t6e_X 225 GALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGL 304 (381)
T ss_dssp TCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEE
T ss_pred HHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCcCCeEEEEE
Confidence 1 467999999999999999999999999887642 1110112234569976532 2689999999
Q ss_pred eC-cEEEeCCCceEEEeCCCeEEEEEEecCC--------CcceechhhhcceEEEEECCCCEEEEeeCCC
Q 014537 360 RG-ADVKLSRSNFFVKVSEDIVCSVFKGITN--------SVPIYGNIMQTNFLVGYDIEQQTVSFKPTDC 420 (423)
Q Consensus 360 ~g-~~~~l~~~~~~~~~~~~~~C~~i~~~~~--------~~~ilG~~fl~~~y~vfD~~~~~igfa~~~c 420 (423)
+| ++|+|++++|+++..++..|++|+..+. ..||||+.|||++|+|||++++|||||+++.
T Consensus 305 ~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 305 DGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp TTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT
T ss_pred CCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEecccC
Confidence 85 9999999999998766789999876542 5799999999999999999999999998653
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=6.5e-43 Score=321.29 Aligned_cols=216 Identities=25% Similarity=0.433 Sum_probs=185.4
Q ss_pred ceeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCC-CCCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 014537 82 ADIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCP-PSQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (423)
Q Consensus 82 ~~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~-~~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 160 (423)
++.+..+.+|+++|.||||+|++.|+|||||+++||+|..|. +..|. .++.|||++|+||+...
T Consensus 6 ~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~--~~~~y~~~~SsT~~~~~------------- 70 (239)
T 1b5f_A 6 ALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACR--AHSMYESSDSSTYKENG------------- 70 (239)
T ss_dssp EEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHH--TSCCBCGGGCTTCEEEE-------------
T ss_pred eeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccC--CCCCCCCccCCCeeeCC-------------
Confidence 344567889999999999999999999999999999999996 33574 56899999999999886
Q ss_pred CCCCCceeeEEcCCCCeeeEEEEEEEEEecCCCCCceecCceEEEeEEecCC-CC-CCCcceeeecCCCCCc------hh
Q 014537 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGSTTGQAVALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LI 232 (423)
Q Consensus 161 c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~~~~~~~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------l~ 232 (423)
+.|.+.|++|+. .|.+++|+|+|++. .++++.||++....+ .| ....+||||||++.++ ++
T Consensus 71 -----~~~~i~Yg~Gs~-~G~~~~D~v~~g~~-----~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~ 139 (239)
T 1b5f_A 71 -----TFGAIIYGTGSI-TGFFSQDSVTIGDL-----VVKEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNML 139 (239)
T ss_dssp -----EEEEEECSSCEE-EEEEEEEEEEETTE-----EEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHH
T ss_pred -----cEEEEEECCCcE-EEEEEEEEEEECCc-----EEccEEEEEEEeccCccccccCcceEEecCccccccHHHHHHH
Confidence 899999999985 59999999999986 899999999998654 24 4678999999999886 44
Q ss_pred hhhhhcccCceEEEeccCC----CceeeeCC--CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEec--cCCCcEEEe
Q 014537 233 SQMRTTIAGKFSYCLVPVS----STKINFGT--NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRLG--VSTPDIVID 304 (423)
Q Consensus 233 ~ql~~i~~~~Fs~~l~~~~----~g~l~fGg--~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~~--~~~~~~iiD 304 (423)
+| +.+..++||+||.+.. .|.|+||| ..++.|+ +.|+|+. ..++|.|+|++|+|+++.+. .....+|||
T Consensus 140 ~q-g~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiD 216 (239)
T 1b5f_A 140 NQ-GLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGD-HTYVPVT-YQYYWQFGIGDVLIGDKSTGFCAPGCQAFAD 216 (239)
T ss_dssp HT-TCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEE-EEEEEEE-EETTEEEEECCEEETTEECCTTTTCEEEEEC
T ss_pred HC-CCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCc-eEEEEcc-cCCeEEEEeeEEEECCEEecccCCCCEEEEe
Confidence 55 6678899999998752 29999999 3456664 9999999 67899999999999998862 346789999
Q ss_pred cCCcceecChhHHHHHHHHHHh
Q 014537 305 SGTTLTFLPQGYNSNLLSVMSS 326 (423)
Q Consensus 305 sGt~~~~lp~~~~~~l~~~~~~ 326 (423)
|||+++++|++++++|.+++.+
T Consensus 217 TGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 217 SGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp TTCSSEEECHHHHHHHHHHTTC
T ss_pred cCcchhhCCHHHHHHHHHHhCC
Confidence 9999999999999999888753
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.7e-37 Score=286.01 Aligned_cols=213 Identities=21% Similarity=0.379 Sum_probs=176.1
Q ss_pred eecCceEEEeEEecCC-CC-CCCcceeeecCCCCCc------hhhhh---hhcccCceEEEeccCC----CceeeeCC--
Q 014537 197 VALPGITFGCGTNNGG-LF-NSKTTGIVGLGGGDIS------LISQM---RTTIAGKFSYCLVPVS----STKINFGT-- 259 (423)
Q Consensus 197 ~~~~~~~fg~~~~~~~-~~-~~~~~GilGLg~~~~s------l~~ql---~~i~~~~Fs~~l~~~~----~g~l~fGg-- 259 (423)
++++++.|||++...+ .| ....+||||||++..+ ++++| +.+..++||+||.+.. .|.|+|||
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 4889999999999876 34 5688999999998764 33333 4578899999998863 39999999
Q ss_pred CCccCCCCeEEeeccCCCCceEEEeEEEEeccEEe-ccCCCcEEEecCCcceecChhHHHHHHHHHHhhhccCcCCCCCC
Q 014537 260 NGIVSGPGVVSTPLTKAKTFYVLTIDAISVGNQRL-GVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQPVADPTG 338 (423)
Q Consensus 260 ~~~~~g~~~~~~p~~~~~~~w~v~l~~i~v~~~~~-~~~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~ 338 (423)
..++.|+ +.|+|+. ...+|.|+|++|+|+++.+ ......+|+||||+++++|++++++|.+++.+... ..+.+
T Consensus 83 ~~~~~g~-l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~g~~ 156 (241)
T 1lya_B 83 SKYYKGS-LSYLNVT-RKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPL----IQGEY 156 (241)
T ss_dssp GGGEEEE-EEEEECS-SBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----ETTEE
T ss_pred HHHcCCc-eEEEECc-cccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeec----cCCcE
Confidence 3456665 9999999 7899999999999999864 34567899999999999999999999999865432 13344
Q ss_pred CcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-EEecC-----CCcceechhhhcceEEEEECCC
Q 014537 339 SLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT-----NSVPIYGNIMQTNFLVGYDIEQ 410 (423)
Q Consensus 339 ~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~-----~~~~ilG~~fl~~~y~vfD~~~ 410 (423)
.+ +|+... .+|+|+|+|+|++++|++++|+++..+ +..|++ |.+.+ ...||||++|||++|+|||+++
T Consensus 157 ~~-~C~~~~---~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~ 232 (241)
T 1lya_B 157 MI-PCEKVS---TLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTVFDRDN 232 (241)
T ss_dssp EE-EGGGGG---GSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEEEETTT
T ss_pred EE-ECCCCc---cCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEEEECCC
Confidence 45 498654 689999999999999999999998753 468997 87652 4689999999999999999999
Q ss_pred CEEEEeeCC
Q 014537 411 QTVSFKPTD 419 (423)
Q Consensus 411 ~~igfa~~~ 419 (423)
+|||||+++
T Consensus 233 ~~igfA~~~ 241 (241)
T 1lya_B 233 NRVGFAEAA 241 (241)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEcC
Confidence 999999975
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=9.5e-24 Score=164.51 Aligned_cols=88 Identities=32% Similarity=0.491 Sum_probs=79.1
Q ss_pred eeecCCccEEEEEEecCCCceEEEEEEcCCCceeeeCCCCCC--CCCCCCCCCCCCCCCCCcccccCCCCccccCCCCCC
Q 014537 83 DIIPNNANYLIRISIGTPPTERLAVADTGSDLIWTQCEPCPP--SQCYMQDSPLFDPKMSSTYKSLPCSSSQCASLNQKS 160 (423)
Q Consensus 83 ~~~~~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c~~--~~C~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~ 160 (423)
+.+..+.+|+++|.||||+|+|.|+|||||+++||+|..|.. ..|. .++.|||++|+||+...
T Consensus 7 l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~--~~~~y~p~~SsT~~~~~------------- 71 (97)
T 1lya_A 7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACW--IHHKYNSDKSSTYVKNG------------- 71 (97)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHH--TSCCBCGGGCTTCEEEE-------------
T ss_pred eEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccC--CCCCCCchhCCCceeCC-------------
Confidence 345678999999999999999999999999999999999972 3684 57899999999999987
Q ss_pred CCCCCceeeEEcCCCCeeeEEEEEEEEEecC
Q 014537 161 CSGVNCQYSVSYGDGSFSNGNLATETVTLGS 191 (423)
Q Consensus 161 c~~~~~~~~~~Yg~g~~~~G~~~~D~v~ig~ 191 (423)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 -----~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 -----TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred -----CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 99999999998 56999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.73 E-value=7.3e-18 Score=128.92 Aligned_cols=78 Identities=18% Similarity=0.444 Sum_probs=66.4
Q ss_pred CCcccccccCCCCCCCeEEEEEeCcEEEeCCCceEEEeCC--CeEEEE-EEecC----CCcceechhhhcceEEEEECCC
Q 014537 338 GSLELCYSFNSLSQVPEVTIHFRGADVKLSRSNFFVKVSE--DIVCSV-FKGIT----NSVPIYGNIMQTNFLVGYDIEQ 410 (423)
Q Consensus 338 ~~~~~C~~~~~~~~~P~i~~~f~g~~~~l~~~~~~~~~~~--~~~C~~-i~~~~----~~~~ilG~~fl~~~y~vfD~~~ 410 (423)
+.++ |.... .+|+|+|+|+|++++|++++|+++... +..|++ |++.+ ...||||++|||++|+|||+++
T Consensus 3 y~v~-C~~~~---~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~ 78 (87)
T 1b5f_B 3 LQVD-CNTLS---SMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGN 78 (87)
T ss_dssp CEEC-GGGGG---GCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTT
T ss_pred EEEE-CCCCC---cCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCC
Confidence 4454 98654 689999999999999999999998653 368997 88642 4589999999999999999999
Q ss_pred CEEEEeeCC
Q 014537 411 QTVSFKPTD 419 (423)
Q Consensus 411 ~~igfa~~~ 419 (423)
+|||||+++
T Consensus 79 ~riGfA~~~ 87 (87)
T 1b5f_B 79 LLVGFAEAA 87 (87)
T ss_dssp TEEEEEEEC
T ss_pred CEEEEEEcC
Confidence 999999974
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.50 E-value=0.05 Score=44.83 Aligned_cols=104 Identities=18% Similarity=0.245 Sum_probs=60.6
Q ss_pred EEeccEEeccCCCcEEEecCCcceecChhHHHHHHHHHHhhhccCc--CCCCCCCcccccccCCCCCCCeEEEEEeCcEE
Q 014537 287 ISVGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIEAQP--VADPTGSLELCYSFNSLSQVPEVTIHFRGADV 364 (423)
Q Consensus 287 i~v~~~~~~~~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~C~~~~~~~~~P~i~~~f~g~~~ 364 (423)
+.|||+.+ .+++|||.+.+.++.+..+.+- +....+... ...+..... +.. ..+...+.+++..+
T Consensus 29 ~~Ing~~v-----~~LVDTGAs~s~Is~~~A~rlG--L~~~~~~~~~~~a~g~G~~~-~~g-----~v~~~~I~Ig~~~~ 95 (148)
T 3s8i_A 29 CKVNGHPL-----KAFVDSGAQMTIMSQACAERCN--IMRLVDRRWAGVAKGVGTQR-IIG-----RVHLAQIQIEGDFL 95 (148)
T ss_dssp EEETTEEE-----EEEECTTCSSCEEEHHHHHHTT--CGGGEEGGGCEECCC---CE-EEE-----EEEEEEEEETTEEE
T ss_pred EEECCEEE-----EEEEeCCCCcEeeCHHHHHHcC--CccccCcceeEEEEcCCccE-EEE-----EEEEEEEEECCEEE
Confidence 34777764 7999999999999998877761 111001000 000000000 110 12334445544322
Q ss_pred EeCCCceEEEeCCCeEEEE-EEecCCCcceechhhhcceEEEEECCCCEEEEeeC
Q 014537 365 KLSRSNFFVKVSEDIVCSV-FKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFKPT 418 (423)
Q Consensus 365 ~l~~~~~~~~~~~~~~C~~-i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~ 418 (423)
.|-. +........|||..||+.+-.+.|++++++-|...
T Consensus 96 ---------------~~~~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 96 ---------------QCSFSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp ---------------EEEEEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred ---------------EEEEEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 1323 33333456899999999999999999999988653
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.25 E-value=0.098 Score=42.92 Aligned_cols=100 Identities=13% Similarity=0.178 Sum_probs=57.8
Q ss_pred EEeccEEeccCCCcEEEecCCcceecChhHHHHHHHHHHhhhc-cCcCC---CCCCCcccccccCCCCCCCeEEEEEeCc
Q 014537 287 ISVGNQRLGVSTPDIVIDSGTTLTFLPQGYNSNLLSVMSSMIE-AQPVA---DPTGSLELCYSFNSLSQVPEVTIHFRGA 362 (423)
Q Consensus 287 i~v~~~~~~~~~~~~iiDsGt~~~~lp~~~~~~l~~~~~~~~~-~~~~~---~~~~~~~~C~~~~~~~~~P~i~~~f~g~ 362 (423)
+.+||+. ..+++|||.+.+.++.+..+.+ .-... ..... .+..... +.. ......+.+++.
T Consensus 31 v~InG~~-----~~~LvDTGAs~s~is~~~a~~l----gl~~~~~~~~~~~a~g~g~~~-~~~-----~~~~~~i~ig~~ 95 (148)
T 2i1a_A 31 IEINNYP-----VKAFVDTGAQTTIMSTRLAKKT----GLSRMIDKRFIGEARGVGTGK-IIG-----RIHQAQVKIETQ 95 (148)
T ss_dssp EEETTEE-----EEEEECTTCSSCEEEHHHHHHH----TGGGGCBCCCC------------CE-----EEEEEEEEETTE
T ss_pred EEECCEE-----EEEEEECCCCccccCHHHHHHc----CCCccCCcceEEEEecCCCcc-ccc-----EEEEEEEEECCE
Confidence 5678875 4799999999999998876654 21110 11110 0000000 100 122335555554
Q ss_pred EEEeCCCceEEEeCCCeEEEEEEecCCCcceechhhhcceEEEEECCCCEEEEe
Q 014537 363 DVKLSRSNFFVKVSEDIVCSVFKGITNSVPIYGNIMQTNFLVGYDIEQQTVSFK 416 (423)
Q Consensus 363 ~~~l~~~~~~~~~~~~~~C~~i~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa 416 (423)
.+.++ + .+.+ .+...|||..||+.+-+..|+.+++|-|.
T Consensus 96 ~~~~~---~-----------~vl~-~~~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 96 YIPCS---F-----------TVLD-TDIDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp EEEEE---E-----------EEEC-SSCSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred Eecee---E-----------EEec-CCCCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 43211 1 1222 13458999999999999999999999885
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=88.38 E-value=0.57 Score=35.39 Aligned_cols=30 Identities=30% Similarity=0.282 Sum_probs=25.4
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeeeCCCC
Q 014537 91 YLIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (423)
Q Consensus 91 Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c 122 (423)
-++.|.|| .|.+.+++|||.+++-+.....
T Consensus 9 P~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 9 PLVTIKIG--GQLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSEEESCCSS
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEecccC
Confidence 45789999 8999999999999999965543
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=87.69 E-value=0.53 Score=35.98 Aligned_cols=26 Identities=23% Similarity=0.097 Sum_probs=23.6
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeee
Q 014537 91 YLIRISIGTPPTERLAVADTGSDLIWTQ 118 (423)
Q Consensus 91 Y~~~i~vGtP~q~~~~~~DTGSs~~WV~ 118 (423)
-++.|.|| .|.+.+++|||+++|-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 46789999 899999999999999996
No 42
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=86.44 E-value=0.89 Score=34.29 Aligned_cols=30 Identities=17% Similarity=0.014 Sum_probs=25.2
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeeeCCCC
Q 014537 91 YLIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (423)
Q Consensus 91 Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c 122 (423)
-++.|.|| .|.+.+++|||.+++-+...+.
T Consensus 9 P~vti~I~--Gq~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 9 PVVTAYIE--GQPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEESSCCC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEcCccc
Confidence 36779999 8999999999999999965533
No 43
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=84.88 E-value=0.79 Score=35.31 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=27.4
Q ss_pred EEEEEEec---CCCceEEEEEEcCCCceeeeCCCCC
Q 014537 91 YLIRISIG---TPPTERLAVADTGSDLIWTQCEPCP 123 (423)
Q Consensus 91 Y~~~i~vG---tP~q~~~~~~DTGSs~~WV~~~~c~ 123 (423)
=.+.|.|| +|+|.+..++|||.++|-+....+.
T Consensus 11 PlvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 11 PVIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp CEEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred CeEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 45677777 7899999999999999999876554
No 44
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=81.67 E-value=1.4 Score=35.71 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=26.8
Q ss_pred CCccEEEEEEecCCCceEEEEEEcCCCceeeeC
Q 014537 87 NNANYLIRISIGTPPTERLAVADTGSDLIWTQC 119 (423)
Q Consensus 87 ~~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~ 119 (423)
..+.+++++.|+ .+++.+++|||++.+-+..
T Consensus 23 ~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 23 QVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred ccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 356799999998 7899999999999988853
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=81.28 E-value=1.4 Score=34.34 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=23.7
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeeeCC
Q 014537 90 NYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 90 ~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~ 120 (423)
.=++ |.|| .|.+.+++|||.+++-+...
T Consensus 14 rP~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 14 PEIL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp CEEE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred CCEE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 3445 9999 89999999999999999654
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=78.54 E-value=2.1 Score=33.04 Aligned_cols=30 Identities=13% Similarity=0.135 Sum_probs=25.7
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeeeCCCC
Q 014537 91 YLIRISIGTPPTERLAVADTGSDLIWTQCEPC 122 (423)
Q Consensus 91 Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~~c 122 (423)
-.+.|.|| .|.+..++|||.+++-+.....
T Consensus 10 P~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 10 PSLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred CeEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 46789999 8999999999999999976644
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=75.34 E-value=2.5 Score=34.46 Aligned_cols=31 Identities=13% Similarity=0.124 Sum_probs=26.9
Q ss_pred CccEEEEEEecCCCceEEEEEEcCCCceeeeCC
Q 014537 88 NANYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 88 ~~~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~ 120 (423)
..-|++++.|. .+++++++|||++.+.+...
T Consensus 22 ~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 22 VTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred cCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 45699999998 89999999999999998544
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=70.11 E-value=5.4 Score=31.72 Aligned_cols=29 Identities=17% Similarity=0.150 Sum_probs=25.0
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeeeCC
Q 014537 90 NYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 90 ~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~ 120 (423)
.-++.+.|+ .|++.+++|||.+++-+...
T Consensus 22 RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 22 EPRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SSEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 467789999 89999999999999999544
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=67.02 E-value=5.9 Score=31.09 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=20.1
Q ss_pred ecCCCceEEEEEEcCCCceeeeCCCC
Q 014537 97 IGTPPTERLAVADTGSDLIWTQCEPC 122 (423)
Q Consensus 97 vGtP~q~~~~~~DTGSs~~WV~~~~c 122 (423)
|| .|.+.+++|||.+++-+.....
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~l 50 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEEDW 50 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTTS
T ss_pred CC--CEEEEEEecCCCCcEEEecccC
Confidence 66 6888999999999999976544
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=65.71 E-value=5.2 Score=34.29 Aligned_cols=28 Identities=32% Similarity=0.292 Sum_probs=24.5
Q ss_pred EEEEEEecCCCceEEEEEEcCCCceeeeCC
Q 014537 91 YLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 91 Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~ 120 (423)
-.+.|.|| .|.+.+++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 57889999 89999999999999999543
No 51
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=45.34 E-value=24 Score=30.15 Aligned_cols=29 Identities=31% Similarity=0.286 Sum_probs=25.0
Q ss_pred cEEEEEEecCCCceEEEEEEcCCCceeeeCC
Q 014537 90 NYLIRISIGTPPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 90 ~Y~~~i~vGtP~q~~~~~~DTGSs~~WV~~~ 120 (423)
.-.+.+.|| .|.+..++|||.+++-+...
T Consensus 112 rP~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 112 RPLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CCcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 357889999 79999999999999999544
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=28.60 E-value=68 Score=29.26 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=28.7
Q ss_pred eEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCcceecChhHH
Q 014537 268 VVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTLTFLPQGYN 317 (423)
Q Consensus 268 ~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~~~lp~~~~ 317 (423)
+..+|+. ....|.++ |+||.+. ..+++|||++.+++|..-.
T Consensus 5 v~~~~~~-~~~~Y~~~---i~iG~Q~-----~~v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 5 AVTTPQN-NDEEYLTP---VTVGKST-----LHLDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEEECT-TTSCEEEE---EEEBTEE-----EEEEEETTCCCEEEECTTS
T ss_pred EEeEEcC-CCCEEEEE---EEECCEE-----EEEEEeCCCccceEeeCCC
Confidence 4445554 56677654 5677554 4799999999999997543
No 53
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=26.68 E-value=62 Score=29.57 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=25.9
Q ss_pred CCccEEEE---EEecC---CCceEEEEEEcCCCceeeeCCC
Q 014537 87 NNANYLIR---ISIGT---PPTERLAVADTGSDLIWTQCEP 121 (423)
Q Consensus 87 ~~~~Y~~~---i~vGt---P~q~~~~~~DTGSs~~WV~~~~ 121 (423)
..+.|.+. |.||. +.....+++|||+++++++...
T Consensus 191 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~ 231 (329)
T 3c9x_A 191 SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNV 231 (329)
T ss_dssp TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHH
Confidence 34566665 56775 2457899999999999997663
No 54
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=25.21 E-value=64 Score=29.39 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=24.9
Q ss_pred CCccEEEE---EEecC-CCceEEEEEEcCCCceeeeCCC
Q 014537 87 NNANYLIR---ISIGT-PPTERLAVADTGSDLIWTQCEP 121 (423)
Q Consensus 87 ~~~~Y~~~---i~vGt-P~q~~~~~~DTGSs~~WV~~~~ 121 (423)
..+.|.++ |.||. +.....+++|||++.++++...
T Consensus 187 ~~~~w~v~l~~i~v~~~~~~~~~aiiDSGTs~~~lP~~~ 225 (323)
T 1bxo_A 187 SQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSV 225 (323)
T ss_dssp TTSSCEEEEEEEEETTEEEEEEEEEECTTCSSEEECHHH
T ss_pred CCCeEEEEEeeEEECCccCCCceEEEeCCCCceeCCHHH
Confidence 34556554 56775 3346789999999999997663
No 55
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=24.67 E-value=76 Score=28.92 Aligned_cols=41 Identities=17% Similarity=0.372 Sum_probs=28.4
Q ss_pred eEEeeccCCCCceEEEeEEEEeccEEeccCCCcEEEecCCcceecChhHH
Q 014537 268 VVSTPLTKAKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTLTFLPQGYN 317 (423)
Q Consensus 268 ~~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~~~lp~~~~ 317 (423)
+...|+. ....|.+ .|+||.+. ..++||||++.+++|..-.
T Consensus 6 v~~~~~~-~~~~Y~~---~i~iG~q~-----~~v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 6 VTTNPTS-NDEEYIT---QVTVGDDT-----LGLDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEEECG-GGCCEEE---EEEETTEE-----EEEEEETTCCCEEECBTTS
T ss_pred eeeeEcC-CCCEEEE---EEEECCEE-----EEEEEcCCCcceEEecCCC
Confidence 4445554 5566764 46677544 4799999999999997643
No 56
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.21 E-value=73 Score=29.09 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=25.2
Q ss_pred CCccEEEE---EEecCC---CceEEEEEEcCCCceeeeCCC
Q 014537 87 NNANYLIR---ISIGTP---PTERLAVADTGSDLIWTQCEP 121 (423)
Q Consensus 87 ~~~~Y~~~---i~vGtP---~q~~~~~~DTGSs~~WV~~~~ 121 (423)
..+.|.+. |.||.- .....+++|||++.++++...
T Consensus 190 ~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~ 230 (329)
T 1oew_A 190 KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATV 230 (329)
T ss_dssp TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHH
T ss_pred CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHH
Confidence 34556554 678752 346789999999999997663
No 57
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=21.84 E-value=80 Score=28.75 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=24.1
Q ss_pred CccEEEE---EEecC--CCceEEEEEEcCCCceeeeCC
Q 014537 88 NANYLIR---ISIGT--PPTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 88 ~~~Y~~~---i~vGt--P~q~~~~~~DTGSs~~WV~~~ 120 (423)
.+.|.+. |.||. +.....+++|||++.++++..
T Consensus 192 ~~~~~v~l~~i~vg~~~~~~~~~~iiDSGTs~~~lP~~ 229 (325)
T 2apr_A 192 RGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNN 229 (325)
T ss_dssp TSSCEEEECEEEETTEEEECCEEEEECTTCSSEEEEHH
T ss_pred CCEEEEEEeEEEECCEecCCCceEEEecCCccEECCHH
Confidence 4456544 57775 234578999999999999876
No 58
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.69 E-value=86 Score=27.10 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=23.0
Q ss_pred ccEEEE---EEecCC-----CceEEEEEEcCCCceeeeCC
Q 014537 89 ANYLIR---ISIGTP-----PTERLAVADTGSDLIWTQCE 120 (423)
Q Consensus 89 ~~Y~~~---i~vGtP-----~q~~~~~~DTGSs~~WV~~~ 120 (423)
..|.+. |.||.- .....+++|||++.++++..
T Consensus 188 ~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 188 YYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp TTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred CeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 456554 677752 34578999999999998654
No 59
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=21.28 E-value=66 Score=30.13 Aligned_cols=33 Identities=24% Similarity=0.501 Sum_probs=22.8
Q ss_pred eecc-C-CCCceEEEeEEEEeccEEeccCCCcEEEecCCcceecCh
Q 014537 271 TPLT-K-AKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTLTFLPQ 314 (423)
Q Consensus 271 ~p~~-~-~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~~~lp~ 314 (423)
+|+. + ....|.++ |+||.. ++||||++.+|+|-
T Consensus 5 ~pv~~~~~~~~Y~~~---i~iGtP--------v~~DTGSs~lWv~c 39 (381)
T 1t6e_X 5 APVTKDPATSLYTIP---FHDGAS--------LVLDVAGPLVWSTC 39 (381)
T ss_dssp EEEEECTTTCCEEEE---EETTEE--------EEEETTCCCEEECC
T ss_pred EeEEecCCCcEEEEE---EeCCCE--------EEEECCCCceEEeC
Confidence 4444 2 45667655 445542 89999999999994
No 60
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.77 E-value=81 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.351 Sum_probs=23.7
Q ss_pred ccEEE---EEEecCC----CceEEEEEEcCCCceeeeCCC
Q 014537 89 ANYLI---RISIGTP----PTERLAVADTGSDLIWTQCEP 121 (423)
Q Consensus 89 ~~Y~~---~i~vGtP----~q~~~~~~DTGSs~~WV~~~~ 121 (423)
..|.+ .|.||.- .....+++|||++.++++...
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 138 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDE 138 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHH
Confidence 44544 5678752 245789999999999997663
No 61
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=20.33 E-value=64 Score=29.55 Aligned_cols=44 Identities=27% Similarity=0.385 Sum_probs=29.8
Q ss_pred CeEEeeccC-CCCceEEEeEEEEeccEEeccCCCcEEEecCCcceecChhH
Q 014537 267 GVVSTPLTK-AKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTLTFLPQGY 316 (423)
Q Consensus 267 ~~~~~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~~~lp~~~ 316 (423)
+...+|+.+ .+..|.+ .|.||.. .....+++|||++.+++|...
T Consensus 6 ~~~~~~l~n~~d~~Y~~---~i~iGtP---~q~~~v~~DTGSs~~Wv~~~~ 50 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYG---EIGIGTP---PQTFKVVFDTGSSNVWVPSSK 50 (341)
T ss_dssp BCEEEEEEEETTTEEEE---EEEETTT---TEEEEEEEETTCCCEEEEBTT
T ss_pred CCccccceEccCCEEEE---EEEEcCC---CcEEEEEEeCCCcceEEccCC
Confidence 455667763 4566665 4667741 234579999999999999653
No 62
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=20.01 E-value=1.2e+02 Score=28.05 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=29.2
Q ss_pred eEEeeccC-CCCceEEEeEEEEeccEEeccCCCcEEEecCCcceecChh
Q 014537 268 VVSTPLTK-AKTFYVLTIDAISVGNQRLGVSTPDIVIDSGTTLTFLPQG 315 (423)
Q Consensus 268 ~~~~p~~~-~~~~w~v~l~~i~v~~~~~~~~~~~~iiDsGt~~~~lp~~ 315 (423)
+...|+.+ ....|.+ .|+||.. .....++||||++.+++|..
T Consensus 7 ~~~~~l~~~~~~~Y~~---~i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 7 VDTPGLYDFDLEEYAI---PVSIGTP---GQDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEEEEEETTTTEEEE---EEEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred cceEEeecCCCCEEEE---EEEECCC---CcEEEEEEcCCCCCeEECCC
Confidence 56677773 4667765 4667731 22347999999999999965
Done!