Query 014538
Match_columns 423
No_of_seqs 217 out of 1761
Neff 8.1
Searched_HMMs 13730
Date Mon Mar 25 13:24:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014538.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014538hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fkma1 a.69.2.1 (A:249-442) Y 100.0 3.5E-33 2.5E-37 252.2 14.6 158 44-247 8-193 (194)
2 d1fkma2 a.69.2.1 (A:443-630) Y 99.8 2.4E-21 1.8E-25 172.9 13.0 164 252-417 2-187 (188)
3 d1dxsa_ a.60.1.2 (A:) C-termin 35.4 19 0.0014 23.0 3.7 36 47-82 15-54 (57)
4 d1wt8a1 g.3.7.2 (A:1-31) Bmkx 22.0 9.4 0.00068 20.5 0.1 7 208-214 24-30 (31)
5 d1rg6a_ a.60.1.2 (A:) C-termin 15.3 37 0.0027 22.4 1.9 21 64-84 40-60 (67)
6 d1g8fa2 c.26.1.5 (A:169-389) A 11.0 72 0.0052 26.1 3.0 32 56-87 188-221 (221)
7 d1puza_ a.218.1.1 (A:) Hypothe 10.7 2.3E+02 0.017 18.9 5.4 30 256-285 40-69 (82)
8 d1erda_ a.10.1.1 (A:) ER-2 {Eu 10.3 42 0.0031 18.8 0.8 15 203-217 12-26 (40)
9 d2gtsa1 a.25.5.1 (A:4-80) Hypo 9.1 1.4E+02 0.01 19.0 3.3 29 253-281 9-37 (77)
10 d1q59a_ f.1.4.1 (A:) Early ant 7.7 1.3E+02 0.0096 22.6 3.0 39 44-82 67-107 (172)
No 1
>d1fkma1 a.69.2.1 (A:249-442) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.5e-33 Score=252.16 Aligned_cols=158 Identities=24% Similarity=0.479 Sum_probs=134.4
Q ss_pred HHHHHhhccCCCccHHHHHHHHHhCCCCCCChHHHHHHhhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 014538 44 RRWHAAFSEDGHLDIAKVLRRIQRGGIHPSIKGLVWEFLLGCYDPNSTFEERNQIRQQRRQQYAAWKTECQNIVPIIGSG 123 (423)
Q Consensus 44 ~~W~~~l~~~~~i~~~kll~~l~~~GIP~~~R~~vW~~LLg~~~~~~~~~~~~~i~~~~~~~Y~~l~~~~~~~~~~~~~~ 123 (423)
++|.+++.+.+.++.++ ++.++++|||+.+|+.||++|||++|.+.+ +|.....++++.|..+........
T Consensus 8 ~~~~~~l~~~~~i~~~~-lr~l~~~Gip~~lR~~vW~~llg~~~~~~~--~~~~~~~~~~~~y~~~~~~~~~~~------ 78 (194)
T d1fkma1 8 SKFDNILKDKTIINQQD-LRQISWNGIPKIHRPVVWKLLIGYLPVNTK--RQEGFLQRKRKEYRDSLKHTFSDQ------ 78 (194)
T ss_dssp HHHHHHHSSCSBCCHHH-HHHHHTTCCCGGGHHHHHHHHTTCSCSBGG--GHHHHHHHHHHHHHHHHHHTSSSS------
T ss_pred HHHHHHhcccCCCCHHH-HHHHHHcCCChHHHHHHHHHHHhhcCCchh--hHHHHHHHHhhhhhhhhhhhhhcc------
Confidence 58999998877789987 566778999999999999999999998885 566777888999988877642100
Q ss_pred cccccccccCCCCccCCCCccccCCCCCCCCccchHHHHHHHHHHhHHhhccccCCCCCcCCCChhhHHHHHHHHHHHHH
Q 014538 124 KFITAAIVTDDGQSLQDSNRDSLDQGWHVDGAISDKKVLQWMLGLHQIGLDVVRTDRSLVFYESETNQAKLWDVLAIYSW 203 (423)
Q Consensus 124 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~qI~~Dv~Rt~~~~~~f~~~~~~~~L~rIL~~y~~ 203 (423)
. ....+..++|++||.||+|++++|..+.+++.|+|||.+|+.
T Consensus 79 -------------------------------~------~~~~~~~~~I~~Dv~RT~~~~~~f~~~~~~~~L~rIL~~ya~ 121 (194)
T d1fkma1 79 -------------------------------H------SRDIPTWHQIEIDIPRTNPHIPLYQFKSVQNSLQRILYLWAI 121 (194)
T ss_dssp -------------------------------C------STHHHHHHHHHHHGGGSSTTSGGGGSHHHHHHHHHHHHHHHH
T ss_pred -------------------------------c------ccchHHHHHHHHHHHhcCCcccccccchhHHHHHHHHHHHHH
Confidence 0 001245789999999999999999999999999999999999
Q ss_pred hcCCCcccCChhhHHHHHHHhcC----------------------------CHHHHHHHHHHHHHHhhhccc
Q 014538 204 VDNDIGYVQGMNDICSPMIVLLE----------------------------NEADAFWCFEHTMRRLRENFR 247 (423)
Q Consensus 204 ~np~igY~QGm~~iaa~ll~~~~----------------------------~E~~aF~~f~~l~~~~~~~~~ 247 (423)
+||++|||||||+|||+|++++. .|++|||||+++|++++.+|.
T Consensus 122 ~np~~gY~QGmn~i~a~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ead~F~~f~~lm~~i~d~y~ 193 (194)
T d1fkma1 122 RHPASGYVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQITDNYI 193 (194)
T ss_dssp HCTTTCSCTTHHHHHHHHHHHHHGGGSCGGGGGGTTTSCGGGTCCHHHHHHHHHHHHHHHHHHHGGGGGGSS
T ss_pred HCCCCCeeecchHHHHHHHHHHhhhhhhhhhhhhhhhcchhhhhhhhhhhhHHHHHHHHHHHHHHhhhccCC
Confidence 99999999999999999998762 289999999999999887775
No 2
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.85 E-value=2.4e-21 Score=172.88 Aligned_cols=164 Identities=21% Similarity=0.269 Sum_probs=114.3
Q ss_pred hhhHHHHHHHHHHHHHHHCHHHHHHHHhCCCCccchHHHHHHHhhcccCChhhHHHHHHHHhccccCCCchhhhccc---
Q 014538 252 MIGVQSQLSTLSQIIRTIDPKLHQHLEDLDGGEYLFAFRMLMVLFRREFSFVDALYLWELMWAMEYNPNIFSLYESN--- 328 (423)
Q Consensus 252 ~~~~~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~~f~~~W~~tlF~~~l~~~~vlriWD~~~~~~~~~~~f~~~~~~--- 328 (423)
.+|++..+..++.+|+.+||+||+||++.|+++.+|+++|++|+|++++|++.++||||.+|+++.....-......
T Consensus 2 qpGi~~~~~~l~~ll~~~dp~L~~hl~~~~i~~~~~~~rW~~~lf~~~~~~~~~~rlWD~~~~~~~~~~~~~~~~~l~~~ 81 (188)
T d1fkma2 2 QPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMGTVIRMWDTYLSETSQEVTSSYSMSSNDI 81 (188)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCTHHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHHC--------------
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeeeHHHHHHHhhccCCHHHHHHHHHHHHhCCchhhhhhhhhhhhhh
Confidence 46999999999999999999999999999999999999999999999999999999999999987542110000000
Q ss_pred ------CCCCCCcccchhHhhh------hchhhhhhhh---cCCCCCCchHHHHHHHHHHHHHHHHHHHhcCChHHHHHH
Q 014538 329 ------SSTSDGRQVNDKQLKQ------CGKFERKNVK---TGLPDKTSALSVFLVASVLETKNKKLLREAKGLDDVVKI 393 (423)
Q Consensus 329 ------~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~l~~~~ail~~~r~~il~~~~~~~~il~~ 393 (423)
......+...+..... .+......++ .+..++..+|++|+|+|+|...|++|++ +++++++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~A~L~~~r~~Ll~--~df~~~l~~ 159 (188)
T d1fkma2 82 KPPVTPTEPRVASFVTPTKDFQSPTTALSNMTPNNAVEDSGKMRQSSLNEFHVFVCAAFLIKWSDQLME--MDFQETITF 159 (188)
T ss_dssp ----------------------------------------------CHHHHHHHHHHHHHHHTHHHHTT--CCHHHHHHH
T ss_pred ccccccccccchhhhhhccccccccccccccchhhhhhcccccccccchHHHHHHHHHHHHHHHHHHHH--ccHHHHHHH
Confidence 0000000000000000 0000111111 1122456899999999999999999997 699999999
Q ss_pred HhhhcCC----CCHHHHHHHHHHHHHHH
Q 014538 394 LADITGN----LDAKKACNEALKIQKKY 417 (423)
Q Consensus 394 l~~l~~~----~d~~~~l~~A~~l~~~~ 417 (423)
++++|.. .|++.++++|..+++.|
T Consensus 160 Lq~~P~~~~~~~di~~ll~~A~~~~~~~ 187 (188)
T d1fkma2 160 LQNPPTKDWTETDIEMLLSEAFIWQSLY 187 (188)
T ss_dssp HTSCSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCCCCcccHHHHHHHHHHHHHHh
Confidence 9999854 39999999998888776
No 3
>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.38 E-value=19 Score=22.96 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=25.3
Q ss_pred HHhhccCCCccHHHHH----HHHHhCCCCCCChHHHHHHh
Q 014538 47 HAAFSEDGHLDIAKVL----RRIQRGGIHPSIKGLVWEFL 82 (423)
Q Consensus 47 ~~~l~~~~~i~~~kll----~~l~~~GIP~~~R~~vW~~L 82 (423)
.+.|.++|..+++.+. ..+..-|||...|..+|+-+
T Consensus 15 ~~~F~~~G~~~l~~l~~lt~eDL~~lGI~~~hr~kilk~i 54 (57)
T d1dxsa_ 15 IEYFTSQGLQSIYHLQNLTIEDLGALKIPEQYRMTIWRGL 54 (57)
T ss_dssp HHHHHTTTCCCHHHHHTCCHHHHHHTTCCTTTHHHHHHHH
T ss_pred HHHHHHccCCcHHHHHHhhHHHHHHcCCCHHHHHHHHHHH
Confidence 3445566665565533 35677899999999999865
No 4
>d1wt8a1 g.3.7.2 (A:1-31) Bmkx {Chinese scorpion (Buthus martensi karsch) [TaxId: 34649]}
Probab=21.99 E-value=9.4 Score=20.52 Aligned_cols=7 Identities=57% Similarity=0.952 Sum_probs=5.0
Q ss_pred CcccCCh
Q 014538 208 IGYVQGM 214 (423)
Q Consensus 208 igY~QGm 214 (423)
-|||||-
T Consensus 24 ngycqgc 30 (31)
T d1wt8a1 24 NGYCQGC 30 (31)
T ss_dssp SEECTTC
T ss_pred CcccccC
Confidence 4788883
No 5
>d1rg6a_ a.60.1.2 (A:) C-terminal domain of p63 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.26 E-value=37 Score=22.40 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=17.1
Q ss_pred HHHhCCCCCCChHHHHHHhhC
Q 014538 64 RIQRGGIHPSIKGLVWEFLLG 84 (423)
Q Consensus 64 ~l~~~GIP~~~R~~vW~~LLg 84 (423)
.+..-.||...|..+|+-++.
T Consensus 40 DL~~mkIp~~~r~~IWK~l~e 60 (67)
T d1rg6a_ 40 DLASLKIPEQFRHAIWKGILD 60 (67)
T ss_dssp HHHTTTCCTHHHHHHHHHHHH
T ss_pred HHHcCcCcHHHHHHHHHHHHH
Confidence 344557999999999999884
No 6
>d1g8fa2 c.26.1.5 (A:169-389) ATP sulfurylase catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=10.98 E-value=72 Score=26.14 Aligned_cols=32 Identities=22% Similarity=0.197 Sum_probs=23.2
Q ss_pred ccHHHHHHHHHhCCCCC--CChHHHHHHhhCCCC
Q 014538 56 LDIAKVLRRIQRGGIHP--SIKGLVWEFLLGCYD 87 (423)
Q Consensus 56 i~~~kll~~l~~~GIP~--~~R~~vW~~LLg~~~ 87 (423)
++.+++++.+..|..|| -.|++||.+|...+|
T Consensus 188 ISGT~iR~~L~~G~~iP~~f~rpEV~~iL~~~~P 221 (221)
T d1g8fa2 188 ISGTELRRRLRVGGEIPEWFSYPEVVKILRESNP 221 (221)
T ss_dssp CCHHHHHHHHHHTCCCCTTTSCHHHHHHHHHHSC
T ss_pred ecHHHHHHHHHCCCCCCcccCcHHHHHHHHHhCc
Confidence 46678677776655555 599999999876554
No 7
>d1puza_ a.218.1.1 (A:) Hypothetical protein NMA1147 {Neisseria meningitidis, mc58 [TaxId: 487]}
Probab=10.68 E-value=2.3e+02 Score=18.86 Aligned_cols=30 Identities=20% Similarity=0.275 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHhCCCCcc
Q 014538 256 QSQLSTLSQIIRTIDPKLHQHLEDLDGGEY 285 (423)
Q Consensus 256 ~~~~~~~~~lL~~~dP~L~~hL~~~~i~~~ 285 (423)
...+..|..+|...|++||..+....-.|.
T Consensus 40 ~~el~~f~~lL~~~D~dL~~wl~g~~~~p~ 69 (82)
T d1puza_ 40 DKELSEFSEILEFQDQELLALINGHSETDK 69 (82)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTCSCCSC
T ss_pred HHHHHHHHHHHcCChHHHHHHHhCCCCCCc
Confidence 456888999999999999999987655443
No 8
>d1erda_ a.10.1.1 (A:) ER-2 {Euplotes raikovi [TaxId: 5938]}
Probab=10.34 E-value=42 Score=18.84 Aligned_cols=15 Identities=27% Similarity=0.266 Sum_probs=10.0
Q ss_pred HhcCCCcccCChhhH
Q 014538 203 WVDNDIGYVQGMNDI 217 (423)
Q Consensus 203 ~~np~igY~QGm~~i 217 (423)
..+.-.|||||--++
T Consensus 12 cehtmcgycqgplym 26 (40)
T d1erda_ 12 CEHTMCGYCQGPLYM 26 (40)
T ss_dssp TCGGGGGGSCHHHHH
T ss_pred ccccccccccCCeeE
Confidence 345567999995443
No 9
>d2gtsa1 a.25.5.1 (A:4-80) Hypothetical protein HP0062 {Helicobacter pylori [TaxId: 210]}
Probab=9.09 E-value=1.4e+02 Score=19.04 Aligned_cols=29 Identities=17% Similarity=0.351 Sum_probs=25.0
Q ss_pred hhHHHHHHHHHHHHHHHCHHHHHHHHhCC
Q 014538 253 IGVQSQLSTLSQIIRTIDPKLHQHLEDLD 281 (423)
Q Consensus 253 ~~~~~~~~~~~~lL~~~dP~L~~hL~~~~ 281 (423)
.+...++..|..||...-..|..|+..++
T Consensus 9 r~fv~hlerfkellndevngls~hf~nl~ 37 (77)
T d2gtsa1 9 REFVGHLERFKELLREEVNSLSNHFHNLE 37 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHhhcchH
Confidence 46677899999999999999999998754
No 10
>d1q59a_ f.1.4.1 (A:) Early antigen protein R {Epstein-Barr virus [TaxId: 10376]}
Probab=7.66 E-value=1.3e+02 Score=22.60 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=30.5
Q ss_pred HHHHHhhccCCCc--cHHHHHHHHHhCCCCCCChHHHHHHh
Q 014538 44 RRWHAAFSEDGHL--DIAKVLRRIQRGGIHPSIKGLVWEFL 82 (423)
Q Consensus 44 ~~W~~~l~~~~~i--~~~kll~~l~~~GIP~~~R~~vW~~L 82 (423)
+.|..++.+...+ |...+...++..|=|.-=|+.+|.--
T Consensus 67 ~t~~~fl~n~e~vd~df~~Vf~eiFh~gdp~lGR~laWlAW 107 (172)
T d1q59a_ 67 ETWNRFITHTEHVDLDFNSVFLEIFHRGDPSLGRALAWMAW 107 (172)
T ss_dssp HHHHHHCCCCSSCTHHHHHHHHHTTTTSCCSTHHHHHHHHH
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 4588888776666 45567788888899999999999743
Done!