BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014540
(423 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZQ34|Y2433_ARATH Uncharacterized protein At2g24330 OS=Arabidopsis thaliana
GN=At2g24330 PE=2 SV=1
Length = 408
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/359 (62%), Positives = 261/359 (72%), Gaps = 16/359 (4%)
Query: 11 EKKDSKAV-----EKK---RKGIISRLWNGIFRLKGDDFEKRLQYISKEEAAILARVKRR 62
EK DS V EKK RKG+ SRLWN IFR++GDDFEKRL+ ISKEEA + R+KRR
Sbjct: 18 EKNDSAVVLSASGEKKTTKRKGLFSRLWNAIFRVRGDDFEKRLKNISKEEATVRNRMKRR 77
Query: 63 SQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSA 122
S T R R+LI F+V FEVIAV YAIMTTR +L+WK R+ ++LP+FLLP ++ L YS+
Sbjct: 78 SITRRNFIRNLIAFSVFFEVIAVSYAIMTTRDEDLDWKLRSFRILPMFLLPAVAFLLYSS 137
Query: 123 FVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVL 182
V F RMCDR+DQ TLE+L+ E KI+ELKERTNYY TQQLIQRYDPDPAAKAAAATVL
Sbjct: 138 LVGFWRMCDRRDQHTLEKLQAEMLGKINELKERTNYYITQQLIQRYDPDPAAKAAAATVL 197
Query: 183 ASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSD 242
ASKLGA+SGL VFVGDES G +N S GLRNRKQ R A +TP+HHSD
Sbjct: 198 ASKLGAESGLKVFVGDESQLEPTAGKNN---AKHSGGLRNRKQTNTRGNSAETTPIHHSD 254
Query: 243 EETSSSFGSE---GPEHNQLVVNHHY-PQVSTMHDGGWIARIAAILVGDDPSQSYALICG 298
E++ S SE G E NQ +V HY PQ HDG WI+RIAA+LVG+DPSQSYALICG
Sbjct: 255 NESNHSGTSERITGTEQNQQMVFEHYNPQEYAAHDGSWISRIAALLVGEDPSQSYALICG 314
Query: 299 NCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGH-ISGSISSLPPKELEELVSGSIS 356
NC MHNGLARKEDFPYITYYCPHC ALN+PK SE H + +LP L+ + S I+
Sbjct: 315 NCRMHNGLARKEDFPYITYYCPHCRALNKPKHSEEHSLIAPADTLPKVSLKPMESEVIN 373
>sp|Q1KKR9|LNPB_TAKRU Protein lunapark-B OS=Takifugu rubripes GN=lnpb PE=3 SV=1
Length = 358
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 19/242 (7%)
Query: 98 NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
W R LP F+ P L + F++ +R + K LE L+ +K ++E+ E
Sbjct: 69 QWLLRLAMALPFFIYPVLVWFIRRFLIFLFSKRSERNNDK-LEDLKATKKKILEEVMETE 127
Query: 157 NYYTTQQLIQRYDPDPAAKAA-AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDV--- 212
Y + +++R+DPD K AT + ++ +G + + ++P+G V
Sbjct: 128 TYKNAKAILERFDPDAKKKPELEATPVRPQMTPGAGQELRQRGVALRHMPMGTPVAVTPG 187
Query: 213 ---EVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYP--- 266
+ P R L G + L S + T S GS P V H P
Sbjct: 188 ARPPLGPGGTPVERVPLSAPGGPPERSGLAASVQMTPRSLGSPVPG-----VGMHPPGPP 242
Query: 267 --QVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNA 324
+ D G + R+ LVGD P YALIC C HNG+A KE+F Y+ + C +C
Sbjct: 243 LARPVLPKDRGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYLAFRCAYCYF 302
Query: 325 LN 326
LN
Sbjct: 303 LN 304
>sp|Q6PFM4|LNPB_DANRE Protein lunapark-B OS=Danio rerio GN=lnpb PE=2 SV=2
Length = 402
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 20/243 (8%)
Query: 98 NWKTRALQVLPIFLLPGLSALAYSAFVS-FNRMCDRKDQKTLERLRVERKAKIDELKERT 156
W R + LP+ P L L + F++ +R + K LE L+ +++ ++E+ E
Sbjct: 69 QWGARLITALPLLAFPALVLLLRKMLIFLFSKRTERNNDK-LEDLKTQKRKILEEVMETE 127
Query: 157 NYYTTQQLIQRYDPDPAAKAAA-ATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVM 215
Y + +++R+DP+ KA A AT + + G + ++ + V
Sbjct: 128 TYKNAKLILERFDPESKKKAEAEATPVRPHMTPRPGQEL-----RQRHIAMATPGPVLGP 182
Query: 216 PSSG---LRNRKQLQPRSG--GAGSTPLHHSDEETSSSFG-------SEGPEHNQLVVNH 263
S G LR P G G+ STP S ET S GP
Sbjct: 183 MSPGTTPLRTAPGGPPEKGLAGSASTPAGASQAETPQQMMRRSMNPYSPGPGSGMRPPGP 242
Query: 264 HYPQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCN 323
+ + G + R+ LVGD P YALIC C HNG+A KE+F ++ + C +C
Sbjct: 243 PLARPILPRERGAVDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEFVAFRCAYCY 302
Query: 324 ALN 326
+N
Sbjct: 303 FMN 305
>sp|Q7TQ95|LNP_MOUSE Protein lunapark OS=Mus musculus GN=Lnp PE=1 SV=1
Length = 425
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 123/301 (40%), Gaps = 37/301 (12%)
Query: 45 LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
L+ I KE A L + ++Q +++ LII++ + + I+ + + R
Sbjct: 18 LENIDKEIQA-LEEFREKNQRLQKLWVGRLIIYSSILYLFTC--LIVYLWYLPDEFTARL 74
Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
+ LP F P + + + F ++ + L+ L+ ++K ++E+ E+ Y T +
Sbjct: 75 VMTLPFFAFPLIIWTLRTVLIFFFSKRTERNNEALDDLKSQKKKILEEVMEKETYKTAKL 134
Query: 164 LIQRYDPD--------PAAKAAAATV-----LASKLGADSGLNVFVGDESNFNVPLGN-- 208
+++R+DPD P + AA T + + A L+ S P G
Sbjct: 135 ILERFDPDSKKAKEFEPPSAGAAVTAKPGQEIRQRTAAQRNLSPAPASSSQGPPPQGPVS 194
Query: 209 ---SNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHY 265
+ D R PR G+ +T + GP + ++
Sbjct: 195 PGPAKDASAPGGPPERTVAPALPRRLGSPATSV------PGMGLHPPGPPLARPILPR-- 246
Query: 266 PQVSTMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNAL 325
+ G + RI LVGD P YALIC C HNG+A KE+F YI + C +C L
Sbjct: 247 -------ERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFL 299
Query: 326 N 326
N
Sbjct: 300 N 300
>sp|Q5R891|LNP_PONAB Protein lunapark OS=Pongo abelii GN=LNP PE=2 SV=1
Length = 428
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 123/318 (38%), Gaps = 66/318 (20%)
Query: 45 LQYISKEEAAILARVKRRSQTWRRMSR-HLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
L+ I KE A L + ++Q +++ LI+++ V + I+ + + R
Sbjct: 18 LESIDKEIQA-LEEFREKNQRLQKLRVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74
Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
LP F P + + + F ++ + L+ L+ +RK ++E+ E+ Y T +
Sbjct: 75 AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134
Query: 164 LIQRYDPDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNR 223
+++R+DPD +K A S GA V P +R R
Sbjct: 135 ILERFDPD--SKKAKECEPPSAGGA-----------------------VTARPGQEIRQR 169
Query: 224 KQLQ---------PRSGGAGSTPLHHSDEETSSSFGSEGPEHNQL-------VVNHHYPQ 267
Q P G P+ + SS+ G GP + V+ H
Sbjct: 170 TAAQRNLSPTPASPNQGPPPQVPVSPGPPKDSSAPG--GPPERTVTPALSSNVLPRHLGS 227
Query: 268 VSTMHDG-------------------GWIARIAAILVGDDPSQSYALICGNCHMHNGLAR 308
+T G G + RI LVGD P YALIC C HNG+A
Sbjct: 228 PATSVPGMGLHPPGPPLARPILPRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMAL 287
Query: 309 KEDFPYITYYCPHCNALN 326
KE+F YI + C +C LN
Sbjct: 288 KEEFEYIAFRCAYCFFLN 305
>sp|Q9C0E8|LNP_HUMAN Protein lunapark OS=Homo sapiens GN=LNP PE=1 SV=2
Length = 428
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 122/296 (41%), Gaps = 22/296 (7%)
Query: 45 LQYISKEEAAILARVKRRSQTWRRM-SRHLIIFTVVFEVIAVGYAIMTTRSMELNWKTRA 103
L+ I KE A L + ++Q +++ LI+++ V + I+ + + R
Sbjct: 18 LESIDKEIQA-LEEFREKNQRLQKLWVGRLILYSSVLYLFTC--LIVYLWYLPDEFTARL 74
Query: 104 LQVLPIFLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQ 163
LP F P + + + F ++ + L+ L+ +RK ++E+ E+ Y T +
Sbjct: 75 AMTLPFFAFPLIIWSIRTVIIFFFSKRTERNNEALDDLKSQRKKILEEVMEKETYKTAKL 134
Query: 164 LIQRYDPD-PAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRN 222
+++R+DPD AK + + A G + + N+ + P+ G
Sbjct: 135 ILERFDPDSKKAKECEPPSAGAAVTARPGQEIRQRTAAQRNL-----SPTPASPNQGPPP 189
Query: 223 RKQLQPRSGGAGSTPLHHSDEETSSSFGSE-------GPEHNQLVVNHHYPQVSTMH--- 272
+ + P S P + + + S P + + H P
Sbjct: 190 QVPVSPGPPKDSSAPGGPPERTVTPALSSNVLPRHLGSPATSVPGMGLHPPGPPLARPIL 249
Query: 273 --DGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
+ G + RI LVGD P YALIC C HNG+A KE+F YI + C +C LN
Sbjct: 250 PRERGALDRIVEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYIAFRCAYCFFLN 305
>sp|Q28HF6|LNP_XENTR Protein lunapark OS=Xenopus tropicalis GN=lnp PE=2 SV=1
Length = 423
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 18/240 (7%)
Query: 102 RALQVLPIFLLPGLSALAYSAFV-SFNRMCDRKDQKTLERLRVERKAKIDELKERTNYYT 160
R L +L P L + + F+R +R + LE L+ E+K ++E+ E+ Y
Sbjct: 73 RLLTMLLFLSFPVLIWFVRTLLILWFSRRTERNN-DALELLKTEKKKILEEVMEKETYKA 131
Query: 161 TQQLIQRYDPDP-AAKAAAATVLASKLGADSG--LNVFVGDESNFNV--PLGNSNDVEVM 215
+ +++R+DPD K V + G L + N +V P+ + +
Sbjct: 132 AKLILERFDPDSRKIKELELPVPGPPITPRPGQDLRQRTAAQRNISVSTPVNPGQESPQV 191
Query: 216 PSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSS------FGSEGPEHNQLVVNHHYPQVS 269
P GL R A P S + T S GS + + ++ P ++
Sbjct: 192 P--GLLAATPSLQRDTSAPGGPPERSVQPTPQSNILQRRPGSPATTVSGMAIHPPGPPLA 249
Query: 270 ---TMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
+ G + R+ LVGD P YALIC C HNG+A KE+F Y+ + C +C LN
Sbjct: 250 RPILPRERGAMDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYVAFRCAYCYFLN 309
>sp|Q6DFJ8|LNP_XENLA Protein lunapark OS=Xenopus laevis GN=lnp PE=2 SV=1
Length = 440
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDP-AAKAAAATVLAS 184
F+R +R + LE L+ E+K ++E+ E+ Y + +++R+DPD K V
Sbjct: 98 FSRRTERNN-DALELLKAEKKKILEEVMEKETYKAAKIILERFDPDSRKIKELELPVPGP 156
Query: 185 KLGADSGLNVFVGDESNFNVPLGNS-NDVEVMPS-SGLRNRKQLQPRSGGAGSTPLHHSD 242
+ G ++ + N+ + N + P SGL R A P S
Sbjct: 157 PITPRPGQDLRQRTAAQRNISVSTPVNPGQGSPQVSGLLAATPALQRDTSAPGGPPERSV 216
Query: 243 EETSSS------FGSEGPEHNQLVVNHHYPQVS---TMHDGGWIARIAAILVGDDPSQSY 293
+ T S GS + + ++ P ++ + G + R+ LVGD P Y
Sbjct: 217 QPTPQSNILQRRPGSPATAVSGMALHPPGPPLARPILPRERGAMDRVIEYLVGDGPQNRY 276
Query: 294 ALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
ALIC C HNG+A KE+F Y+ + C +C LN
Sbjct: 277 ALICQQCFSHNGMALKEEFEYVAFRCAYCYFLN 309
>sp|Q7ZU80|LNPA_DANRE Protein lunapark-A OS=Danio rerio GN=lnpa PE=2 SV=1
Length = 393
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 275 GWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
G + R+ LVGD P YALIC C HNG+A KE+F YI + C +C LN
Sbjct: 247 GAVDRVIEYLVGDGPQNRYALICQQCLSHNGMALKEEFEYIAFRCAYCYFLN 298
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPD 171
+N+ +R ++K LE L+ E+K ++++ E Y + +++R+DPD
Sbjct: 98 YNKRTERNNEK-LEELKAEKKKILEQVMETETYKNAKLILERFDPD 142
>sp|Q1KKT4|LNPA_TAKRU Protein lunapark-A OS=Takifugu rubripes GN=lnpa PE=3 SV=1
Length = 348
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 90/230 (39%), Gaps = 48/230 (20%)
Query: 126 FNRMCDRKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAA-ATVLAS 184
F R ++ + K LE L+ +++ ++++ E Y + +++R+DP+ K +T +
Sbjct: 96 FARRTEKNNFK-LEDLKAQKRKILEDVMETETYKNAKLILERFDPESKKKTDFDSTPVGP 154
Query: 185 KLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDE- 243
++ G L + N V P + + + SG A PL
Sbjct: 155 QMTPKPGQE------------LRHRNVVPQTPPASVNSA------SGAAARPPLASGPAY 196
Query: 244 --ETSSSFGSEGPEHNQLVVNHH-------------YPQVSTMHDG------------GW 276
+S S PE N L + P V G G
Sbjct: 197 PGRSSHSAPGGPPERNLLAIAAQQSLMRKFVTPGTPIPGVGLHPPGPPLARPVLPRERGV 256
Query: 277 IARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALN 326
+ R+ LVGD P AL+C C HNG+A KE+F Y+ + C +C LN
Sbjct: 257 LDRLIEYLVGDGPQNRLALVCQQCLSHNGMALKEEFEYVAFRCAYCYFLN 306
>sp|Q17667|LNP1_CAEEL Protein lunapark-1 OS=Caenorhabditis elegans GN=lnp-1 PE=2 SV=2
Length = 342
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 119/319 (37%), Gaps = 57/319 (17%)
Query: 36 LKGDDFEKRLQYISKEEAAILARVKRRSQTWRRMSRHLIIFTVVFEVIAVGYAIMTTRSM 95
L DD +KRLQ IS L + + VV IA+ + +
Sbjct: 20 LSIDDLKKRLQTISSSNTNTLY--------------YYYMSIVVILSIAMAHTWLRFEDP 65
Query: 96 ELNWKTRALQVLPI-FLLPGLSALAYSAFVSFNRMCDRKDQKTLERLRVERKAKIDELKE 154
+ + AL + I +L G + + F S+ +R QK LE ++ +D +KE
Sbjct: 66 QKTYVACALMLGAIGIVLAGRYVI--NGFFSWR--TNRTTQK-LENAISQKTTLLDLVKE 120
Query: 155 RTNYYTTQQLIQRYDPDPAAKAAAATVLA---SKLGADSGLNVFVGDESNFNVPLGNSND 211
+ ++++ RY+ K T + S L + S + D S F P
Sbjct: 121 TLKFKEAKEILDRYE-----KIEQNTTIDKNDSTLKSPSPIKKLTADSSMFATPKQEQKR 175
Query: 212 VEVMPSSGLRNRKQLQPRSG--GAGSTPLHHSDEETSSSFGSEGPEHNQLVVNHHYPQVS 269
VE + G P S TP H + N + + Q +
Sbjct: 176 VETPTAQG--------PNSAMNSMNMTPYHQRNR-------------NAVPIRPFLRQTT 214
Query: 270 TMHDGGWIARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPK 329
R+ + D P+ ALIC CH HNG++ ++PYI++ C C LN K
Sbjct: 215 AFD------RVLDYFMSDGPNCRNALICSICHTHNGMSTPAEYPYISFRCFECGHLNPAK 268
Query: 330 ESEGHISGSISSLPPKELE 348
+ I + + PK ++
Sbjct: 269 KMGPQIPLTRPPMGPKGIQ 287
>sp|A8XK26|LNP1_CAEBR Protein lunapark-1 OS=Caenorhabditis briggsae GN=lnp-1 PE=3 SV=1
Length = 344
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 14/113 (12%)
Query: 277 IARIAAILVGDDPSQSYALICGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHI- 335
+ RI + D P+ ALIC CH HNG++ ++P+I++ C C LN K+ H+
Sbjct: 219 LDRILDYFMSDGPNCRNALICSICHTHNGMSVPAEYPFISFRCFECGHLNAAKKMGPHLP 278
Query: 336 -------------SGSISSLPPKELEELVSGSISNPPLKVSEEHVADCSSSSP 375
+G +PPK + +V NP ++ S S P
Sbjct: 279 ITRPPMGPKGIQHNGRAGPVPPKNQQPVVPMENPNPSTDLTPSASQHGSDSEP 331
>sp|P38878|YHZ2_YEAST Uncharacterized membrane protein YHR192W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YHR192W PE=1
SV=1
Length = 278
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/286 (19%), Positives = 96/286 (33%), Gaps = 71/286 (24%)
Query: 72 HLIIFTVVFEVIAVGYAIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFNRMCD 131
+L + + V+A+ Y AL + +L + AF + NR+
Sbjct: 53 NLTFYGIALTVLALSYTYWEYHGYRPYLVVTALLCIGSLILFKWALTKLYAFYNNNRL-- 110
Query: 132 RKDQKTLERLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSG 191
+ L +LR + K+++LKE T+Y T +IQR+ G D
Sbjct: 111 ----RKLAKLRAIHQKKLEKLKEETHYNATSSIIQRFSS----------------GEDQN 150
Query: 192 LNVFVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGGAGSTPLHHSDEETSSSFGS 251
+ V + N N+++ T L +E+
Sbjct: 151 DDAMVLLDDELNAKYQELNNLK----------------------TELEKFKKES------ 182
Query: 252 EGPEHNQLVVNHHYPQVSTMHDGGWIARIAAILVGDDPSQSYA-------LICGNCHMHN 304
H + W +I ++L G + S + +IC CH +
Sbjct: 183 ------------HVKGLKKEDSDAWFDKIISVLAGGNELDSTSSLSPFKKIICPQCHWKS 230
Query: 305 GLARKEDFPYITYYCPHCN-ALNRPKESEGHISGSISSLPPKELEE 349
R P I + CPHCN ++ KE E I + P + +E
Sbjct: 231 NCYRLASKP-IIFICPHCNHKIDEVKEREDAIEAKQPAQPSQSEKE 275
>sp|O94414|LNP_SCHPO Protein lunapark homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=SPCC1620.07c PE=1 SV=1
Length = 334
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 56/139 (40%), Gaps = 27/139 (19%)
Query: 271 MHDGGWIARIAAILVG---DDPSQSYALICGNCHMHNGLARK-EDFPYITYYCPHCNALN 326
MH W R+ LVG + + ALIC +C HNGLA E + Y C C A N
Sbjct: 172 MHPQHWYDRVLEGLVGANENSENNREALICSHCFHHNGLASYGEKASDVRYVCLFCKAWN 231
Query: 327 RPKESEGHISGSISSLPPKELEELVSGSISNPPLKVSEEHVADCSSSSPNMSTLTADSVN 386
P + SLP E++ S +NP + S N S T
Sbjct: 232 GPPIDK--------SLPSSEMD---SNLQTNP---------SSISKGKKNNSNNTTQKGP 271
Query: 387 NATTSPLSGSICGSNSPVR 405
N +SP + ++SPVR
Sbjct: 272 NIISSP---QVINASSPVR 287
>sp|Q8TAT5|NEIL3_HUMAN Endonuclease 8-like 3 OS=Homo sapiens GN=NEIL3 PE=1 SV=3
Length = 605
Score = 35.4 bits (80), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 297 CGNCHMHNGLARKEDFPYITYYCPHCNALNRPKESEGHISGSISSLPPK 345
CG CH + R D +TY+CPHC KE+ H+ I LP +
Sbjct: 254 CGQCHCRITVCRFGDNNRMTYFCPHCQ-----KENPQHV--DICKLPTR 295
>sp|Q6GFR0|MENE_STAAR 2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain
MRSA252) GN=menE PE=3 SV=1
Length = 492
Score = 35.0 bits (79), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 88 AIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFN-RMCDRKD-QKTLERLRVER 145
AI S+ + T L VLPI+ + GLS L + F R+ D+ + ++ L ++ ER
Sbjct: 190 AIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMIKNER 249
Query: 146 KAKIDELKERTNYYTTQQLIQRYD 169
I + + N+ Q L + YD
Sbjct: 250 ITHISLVPQTLNWLMQQGLHEPYD 273
>sp|Q2YTP0|MENE_STAAB 2-succinylbenzoate--CoA ligase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=menE PE=3 SV=1
Length = 492
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 88 AIMTTRSMELNWKTRALQVLPIFLLPGLSALAYSAFVSFN-RMCDRKD-QKTLERLRVER 145
AI S+ + T L VLPI+ + GLS L + F R+ D+ + ++ L ++ ER
Sbjct: 190 AIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVDKFNAEQILTMIKNER 249
Query: 146 KAKIDELKERTNYYTTQQLIQRYDPDPAAKAAA---ATVLASKLGADSGLNVFVGDESNF 202
I + + N+ Q L + YD A AT++ + L +
Sbjct: 250 ITHISLVPQTLNWLMQQGLHEPYDLQKILLGGAKLSATMIETAL--------------QY 295
Query: 203 NVPLGNS 209
N+P+ NS
Sbjct: 296 NLPIYNS 302
>sp|Q9PQQ7|RL2_UREPA 50S ribosomal protein L2 OS=Ureaplasma parvum serovar 3 (strain
ATCC 700970) GN=rplB PE=3 SV=1
Length = 279
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 144 ERKAKIDELKE-RTNYYTTQQLIQRYDPDPA--------AKAAAATVLASKLGADSGLNV 194
+RK +I + K + N Y T + I+ YDP+ A ++A K G G +
Sbjct: 60 KRKYRIIDFKRNKDNIYGTIKSIE-YDPNRTSFISLVVYADGEKRYIIAPK-GIKVGDKI 117
Query: 195 FVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGG 232
G+E N ++ LGNS +E +P L + +L P +GG
Sbjct: 118 ISGNE-NIDILLGNSLPLEFIPEGTLVHNIELSPNAGG 154
>sp|B1AIM3|RL2_UREP2 50S ribosomal protein L2 OS=Ureaplasma parvum serovar 3 (strain
ATCC 27815 / 27 / NCTC 11736) GN=rplB PE=3 SV=1
Length = 279
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 144 ERKAKIDELKE-RTNYYTTQQLIQRYDPDPA--------AKAAAATVLASKLGADSGLNV 194
+RK +I + K + N Y T + I+ YDP+ A ++A K G G +
Sbjct: 60 KRKYRIIDFKRNKDNIYGTIKSIE-YDPNRTSFISLVVYADGEKRYIIAPK-GIKVGDKI 117
Query: 195 FVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGG 232
G+E N ++ LGNS +E +P L + +L P +GG
Sbjct: 118 ISGNE-NIDILLGNSLPLEFIPEGTLVHNIELSPNAGG 154
>sp|B5ZB43|RL2_UREU1 50S ribosomal protein L2 OS=Ureaplasma urealyticum serovar 10
(strain ATCC 33699 / Western) GN=rplB PE=3 SV=1
Length = 279
Score = 33.9 bits (76), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 144 ERKAKIDELKE-RTNYYTTQQLIQRYDPDPA--------AKAAAATVLASKLGADSGLNV 194
+RK +I + K + N Y T + I+ YDP+ A ++A K G G +
Sbjct: 60 KRKYRIIDFKRNKDNIYGTIKSIE-YDPNRTSFISLVVYADGEKRYIIAPK-GIKVGDKI 117
Query: 195 FVGDESNFNVPLGNSNDVEVMPSSGLRNRKQLQPRSGG 232
G+E N ++ LGNS +E +P L + +L P +GG
Sbjct: 118 ISGNE-NIDILLGNSLPLEFIPEDTLVHNIELSPNAGG 154
>sp|B8FET4|RL4_DESAA 50S ribosomal protein L4 OS=Desulfatibacillum alkenivorans (strain
AK-01) GN=rplD PE=3 SV=1
Length = 206
Score = 33.9 bits (76), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 170 PDPAAKAAAATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVMPSSGL 220
P+ KA A + A +G D+ L V G+E N + N V+VMP++GL
Sbjct: 132 PEIKTKAFAEAMAA--MGVDTALIVTTGEEKNLELSARNVKGVKVMPTAGL 180
>sp|Q2NVN4|CYSJ_SODGM Sulfite reductase [NADPH] flavoprotein alpha-component OS=Sodalis
glossinidius (strain morsitans) GN=cysJ PE=3 SV=1
Length = 603
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 165 IQRYDPDPAAKAAAAT-VLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVM--PSSGLR 221
+ RY+ D + A+ LA +LG D L VF+ NF +P G+ N +M P +G+
Sbjct: 411 VVRYEIDGRPRTGGASGYLADRLGEDDELRVFIEHNDNFRLP-GDPNTPVIMIGPGTGIA 469
Query: 222 N-RKQLQPR--SGGAGSTPLHHSDEETSSSF 249
R LQ R G G L + + F
Sbjct: 470 PFRAFLQQREADGAPGQNWLFFGNPHFTDDF 500
>sp|A8G9X6|CYSJ_SERP5 Sulfite reductase [NADPH] flavoprotein alpha-component OS=Serratia
proteamaculans (strain 568) GN=cysJ PE=3 SV=1
Length = 599
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 165 IQRYDPDPAAKAA-AATVLASKLGADSGLNVFVGDESNFNVPLGNSNDVEVM-PSSGL-- 220
+ RYD D A+A A++ LA +L D + VF+ NF +P V ++ P +G+
Sbjct: 407 VVRYDIDGRARAGGASSFLADRLEEDGDVRVFIEHNDNFRLPANPETPVIMIGPGTGIAP 466
Query: 221 -RNRKQLQPRSGGAGSTPLHHSDEETSSSF 249
R Q + G G L + + F
Sbjct: 467 FRAFMQQRDADGAGGKNWLFFGNPHFTEDF 496
>sp|Q5NNK9|RIMM_ZYMMO Ribosome maturation factor RimM OS=Zymomonas mobilis subsp. mobilis
(strain ATCC 31821 / ZM4 / CP4) GN=rimM PE=3 SV=1
Length = 163
Score = 32.3 bits (72), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Query: 126 FNRMCDRKDQKTLE--RLRVERKAKIDELKERTNYYTTQQLIQRYDPDPAAKAAAATVLA 183
F+ + DR + L L V RKA + +L YY LI DP+ ++ +V
Sbjct: 65 FSEITDRNQAEALRGTALTVPRKA-LPDLPADEYYYI--DLIGLPCVDPSGQSIGVSVAV 121
Query: 184 SKLGADSGLNVFVGDESNFNVPLGNSNDV 212
GA L + DE F VP+ + DV
Sbjct: 122 ENYGAGDILEIEKADEKRFMVPIAQAVDV 150
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,167,706
Number of Sequences: 539616
Number of extensions: 6495012
Number of successful extensions: 18071
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 17950
Number of HSP's gapped (non-prelim): 150
length of query: 423
length of database: 191,569,459
effective HSP length: 120
effective length of query: 303
effective length of database: 126,815,539
effective search space: 38425108317
effective search space used: 38425108317
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)