Query 014542
Match_columns 423
No_of_seqs 250 out of 583
Neff 5.8
Searched_HMMs 13730
Date Mon Mar 25 13:28:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014542.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014542hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1b0aa1 c.2.1.7 (A:123-288) Me 64.8 16 0.0012 30.4 9.3 69 247-327 39-108 (166)
2 d1e5da1 c.23.5.1 (A:251-402) R 64.3 5.7 0.00042 31.6 6.1 62 244-311 3-67 (152)
3 d2fzva1 c.23.5.4 (A:1-233) Put 60.5 8.8 0.00064 33.6 7.0 62 242-305 31-104 (233)
4 d1a4ia1 c.2.1.7 (A:127-296) Me 51.9 40 0.0029 27.9 9.6 70 247-328 41-111 (170)
5 d1ycga1 c.23.5.1 (A:251-399) N 51.4 7.8 0.00057 30.6 4.7 57 243-305 2-58 (149)
6 d1vmea1 c.23.5.1 (A:251-398) R 42.0 25 0.0018 27.4 6.4 57 243-305 3-62 (148)
7 d1t1ra3 c.2.1.3 (A:275-300) 1- 38.3 3.7 0.00027 24.3 0.3 19 93-111 4-22 (26)
8 d2a5la1 c.23.5.8 (A:3-198) Trp 38.1 8.6 0.00063 31.6 2.9 55 244-305 2-72 (196)
9 d1gdha2 c.23.12.1 (A:2-100,A:2 37.6 42 0.0031 25.9 7.1 79 262-353 11-92 (129)
10 d2qwxa1 c.23.5.3 (A:1-230) Qui 37.1 21 0.0015 30.0 5.4 35 247-288 4-43 (230)
11 d5nula_ c.23.5.1 (A:) Flavodox 35.6 16 0.0011 28.2 4.0 57 246-312 1-60 (138)
12 d1rlia_ c.23.5.6 (A:) Hypothet 34.5 29 0.0021 27.4 5.7 53 248-307 2-74 (179)
13 d1ydga_ c.23.5.8 (A:) Trp repr 33.2 23 0.0017 29.2 5.0 54 245-305 4-79 (201)
14 d1xova2 c.56.5.6 (A:1-180) End 26.5 50 0.0037 27.0 6.0 34 277-310 41-81 (180)
15 d1qp8a1 c.2.1.4 (A:83-263) Put 25.7 23 0.0017 29.3 3.6 59 249-311 123-181 (181)
16 d1jwqa_ c.56.5.6 (A:) N-acetyl 23.7 49 0.0036 26.7 5.3 90 265-360 33-126 (179)
17 d1d4aa_ c.23.5.3 (A:) NAD(P)H: 23.0 59 0.0043 28.4 6.1 16 291-306 84-99 (273)
18 d1y9ua_ c.94.1.1 (A:) Ferric-b 21.4 70 0.0051 26.5 6.1 44 263-311 15-61 (318)
No 1
>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=64.78 E-value=16 Score=30.40 Aligned_cols=69 Identities=9% Similarity=0.139 Sum_probs=49.0
Q ss_pred EEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeech-hhhhhhcccCCCcEEE
Q 014542 247 RLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHG-AQLTNMLFMDRNSSVM 325 (423)
Q Consensus 247 rv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHG-AgLTN~lFm~pgs~vi 325 (423)
++++|.|.. +--.-+...|.+ .|+.|.+....+-.+. +.+.+|||+|+.=| +++...=|.+||++||
T Consensus 39 ~v~VIGrS~----~VG~Pla~lL~~-----~gatVt~~h~~t~~l~---~~~~~ADivI~a~G~p~~i~~~~vk~g~vvI 106 (166)
T d1b0aa1 39 NAVVIGASN----IVGRPMSMELLL-----AGCTTTVTHRFTKNLR---HHVENADLLIVAVGKPGFIPGDWIKEGAIVI 106 (166)
T ss_dssp EEEEECCCT----TTHHHHHHHHHT-----TTCEEEEECSSCSCHH---HHHHHCSEEEECSCCTTCBCTTTSCTTCEEE
T ss_pred eEEEEeccc----cccHHHHHHHHH-----hhccccccccccchhH---HHHhhhhHhhhhccCcccccccccCCCcEEE
Confidence 458888653 334456667766 5888888876665554 45589999998777 4555556889999999
Q ss_pred EE
Q 014542 326 EF 327 (423)
Q Consensus 326 Ei 327 (423)
.+
T Consensus 107 Dv 108 (166)
T d1b0aa1 107 DV 108 (166)
T ss_dssp EC
T ss_pred ec
Confidence 87
No 2
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]}
Probab=64.25 E-value=5.7 Score=31.56 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=42.8
Q ss_pred CeeEEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEE---eechhh
Q 014542 244 PIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVA---SPHGAQ 311 (423)
Q Consensus 244 p~irv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlI---gvHGAg 311 (423)
+++-|+|.|..|+ -+++.+++.+.+.. .|+++.++.....+..+-+..+.++|.+| ..|+.+
T Consensus 3 ~Ki~IiY~S~tGn-----Te~~A~~Ia~~l~~-~g~ev~~~~~~~~~~~~~~~~l~~~d~vi~Gspt~~~~ 67 (152)
T d1e5da1 3 NKVVIFYDSMWHS-----TEKMARVLAESFRD-EGCTVKLMWCKACHHSQIMSEISDAGAVIVGSPTHNNG 67 (152)
T ss_dssp SEEEEEECCSSSH-----HHHHHHHHHHHHHH-TTCEEEEEETTTSCHHHHHHHHHTCSEEEEECCCBTTB
T ss_pred CeEEEEEECCCcH-----HHHHHHHHHHHHhh-CCCEEEEeecccCChhhhccchhhCCEEEEeccccCCc
Confidence 4666777787752 34444444443332 68899999999899989999999999776 345444
No 3
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=60.45 E-value=8.8 Score=33.61 Aligned_cols=62 Identities=16% Similarity=0.111 Sum_probs=39.1
Q ss_pred CCCeeEEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCC------------HHHHHHHhcCCcEEE
Q 014542 242 GQPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLS------------FCDQVKVMTGTDVVA 305 (423)
Q Consensus 242 ~~p~irv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls------------~~eQv~l~~~adVlI 305 (423)
+.|++||++|.=. .|+=.|-..+++.+.+.+.. .|.+++++++.+++ +.+-.+.+..||.+|
T Consensus 31 ~~~~~KIl~I~GS-~R~~s~s~~la~~~~~~l~~-~G~ev~~idL~dlpl~~~~~~~~~~~v~~l~~~l~~AD~vI 104 (233)
T d2fzva1 31 DAPPVRILLLYGS-LRARSFSRLAVEEAARLLQF-FGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQV 104 (233)
T ss_dssp CCSCCEEEEEESC-CSSSCHHHHHHHHHHHHHHH-TTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEE
T ss_pred CCCCCeEEEEeCC-CCCCCHHHHHHHHHHHHhhh-cCeEEEEEccCCCCCCCcccccCCHHHHHHHHHHhhcCeeE
Confidence 4556677888743 24334444444444433322 68999999877665 346677888898776
No 4
>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.87 E-value=40 Score=27.85 Aligned_cols=70 Identities=7% Similarity=0.141 Sum_probs=50.5
Q ss_pred EEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeech-hhhhhhcccCCCcEEE
Q 014542 247 RLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHG-AQLTNMLFMDRNSSVM 325 (423)
Q Consensus 247 rv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHG-AgLTN~lFm~pgs~vi 325 (423)
++++|.|.. +--.-+...|.+ .|..|.+....+-... +..++|||+|+..| +++-..=|.+||+.||
T Consensus 41 ~vvVIGrS~----iVGrPLa~lL~~-----~gatVt~~~~~t~~l~---~~~~~aDivi~a~G~~~~i~~~~vk~g~ivi 108 (170)
T d1a4ia1 41 HAVVVGRSK----IVGAPMHDLLLW-----NNATVTTCHSKTAHLD---EEVNKGDILVVATGQPEMVKGEWIKPGAIVI 108 (170)
T ss_dssp EEEEECCCT----TTHHHHHHHHHH-----TTCEEEEECTTCSSHH---HHHTTCSEEEECCCCTTCBCGGGSCTTCEEE
T ss_pred eEEEEecCC----ccchHHHHHHHh-----ccCceEEEecccccHH---HHHhhccchhhccccccccccccccCCCeEe
Confidence 458898753 223446666666 5888888887776664 45679999996665 5666677899999999
Q ss_pred EEe
Q 014542 326 EFF 328 (423)
Q Consensus 326 Ei~ 328 (423)
.+-
T Consensus 109 Dvg 111 (170)
T d1a4ia1 109 DCG 111 (170)
T ss_dssp ECC
T ss_pred ccC
Confidence 984
No 5
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]}
Probab=51.37 E-value=7.8 Score=30.57 Aligned_cols=57 Identities=11% Similarity=0.077 Sum_probs=38.8
Q ss_pred CCeeEEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEE
Q 014542 243 QPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVA 305 (423)
Q Consensus 243 ~p~irv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlI 305 (423)
+.++-|+|.|+.| |-+++.+++.+.+.. .|.+++++.....+..+....+.++|.+|
T Consensus 2 k~K~lIvY~S~~G-----nT~~vA~~Ia~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~d~ii 58 (149)
T d1ycga1 2 KAKAVIAYDTMWL-----STEKMAHALMDGLVA-GGCEVKLFKLSVSDRNDVIKEILDARAVL 58 (149)
T ss_dssp CSEEEEEECCSSS-----HHHHHHHHHHHHHHH-TTCEEEEEEGGGSCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEEECCCc-----HHHHHHHHHHHHHHh-cCCeeEEEEccccchHHHhhhhhhCCeEE
Confidence 3466678888875 233344444433322 58899999888888888888888888776
No 6
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=42.04 E-value=25 Score=27.36 Aligned_cols=57 Identities=11% Similarity=0.060 Sum_probs=38.1
Q ss_pred CCeeEEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeC---CCCCHHHHHHHhcCCcEEE
Q 014542 243 QPIIRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQS---EDLSFCDQVKVMTGTDVVA 305 (423)
Q Consensus 243 ~p~irv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~---~~ls~~eQv~l~~~adVlI 305 (423)
+.++-|+|.|..| |-+.+++.+.+.+.. .|+++.+... +...+.+...-+.++|.+|
T Consensus 3 ~~kv~IiY~S~tG-----nTe~~A~~i~~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~l~~~d~ii 62 (148)
T d1vmea1 3 KGKVTVIYDSMYG-----FVENVMKKAIDSLKE-KGFTPVVYKFSDEERPAISEILKDIPDSEALI 62 (148)
T ss_dssp TTEEEEEEECSSS-----HHHHHHHHHHHHHHH-TTCEEEEEEECSSCCCCHHHHHHHSTTCSEEE
T ss_pred CCEEEEEEECCCc-----HHHHHHHHHHHHHHh-CCCeEEEEecccccccchhHhhhhHHHCCEeE
Confidence 4577788888775 344555555544432 6888887754 4456788888888888754
No 7
>d1t1ra3 c.2.1.3 (A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=38.31 E-value=3.7 Score=24.25 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=14.4
Q ss_pred cccccccCCCCCCCceeee
Q 014542 93 KNSYAFAWPESLPESATLL 111 (423)
Q Consensus 93 ~~~~~~~w~~~~p~~~~~i 111 (423)
--+|+|+|++.+..++.-+
T Consensus 4 PIA~aLa~PeRi~sgv~~L 22 (26)
T d1t1ra3 4 PIAHTMAWPNRVNSGVKPL 22 (26)
T ss_dssp HHHHHHHTTSCCCCCCCCC
T ss_pred hhhhhccCccccccCCccc
Confidence 3479999999988776543
No 8
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.13 E-value=8.6 Score=31.56 Aligned_cols=55 Identities=15% Similarity=0.214 Sum_probs=35.0
Q ss_pred CeeEEEEEEecC-CCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCH---------------HHHHHHhcCCcEEE
Q 014542 244 PIIRLTLLMRRG-SRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSF---------------CDQVKVMTGTDVVA 305 (423)
Q Consensus 244 p~irv~li~R~~-~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~---------------~eQv~l~~~adVlI 305 (423)
|++-|+|.|+.| ++.+. +++.+.+++ .|.+++++...++++ .+....+.++|.||
T Consensus 2 ~Kvliiy~S~~GnT~~la--~~i~~g~~~-----~g~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~D~ii 72 (196)
T d2a5la1 2 PYILVLYYSRHGATAEMA--RQIARGVEQ-----GGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLA 72 (196)
T ss_dssp CEEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEE
T ss_pred CeEEEEEeCCCcHHHHHH--HHHHHHHhh-----cCCEEEEEeccccchHHHHhccccccccccccchhhhhhcCEEE
Confidence 577778888875 34332 445555554 688999887754432 12355677888776
No 9
>d1gdha2 c.23.12.1 (A:2-100,A:292-321) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}
Probab=37.58 E-value=42 Score=25.94 Aligned_cols=79 Identities=8% Similarity=0.131 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhccccCCcEEEEEe-CCCCCHHHHHHHhcCCcEEEeechhhhhhhcc--cCCCcEEEEEeeCCccccccc
Q 014542 262 ATAVTEIFAEECAMVDGCVLKVEQ-SEDLSFCDQVKVMTGTDVVASPHGAQLTNMLF--MDRNSSVMEFFPKGWLELAGV 338 (423)
Q Consensus 262 e~ev~~~l~~~~~~~~G~~v~vv~-~~~ls~~eQv~l~~~adVlIgvHGAgLTN~lF--m~pgs~viEi~P~g~~~~~g~ 338 (423)
.+++++.+++ .|++.... ...+|-.|-++...++|++|...+..++.-++ +|++-.+|--+.-|+-..
T Consensus 11 ~~~~~~~l~~------~~~v~~~~~~~~~s~~el~~~~~~~d~ii~~~~~~i~~~~l~~~~~~LK~I~~~gvG~d~I--- 81 (129)
T d1gdha2 11 PEAAMARARE------SYDVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHI--- 81 (129)
T ss_dssp CHHHHHHHHT------TSEEEECCSTTCCCHHHHHHHHTTCSEEEEETTSCBCHHHHHHSCTTCCEEEEESSCCTTB---
T ss_pred CHHHHHHHHc------CCcEEEeCCCCCCCHHHHHHHhcCCCEEEEcCCchhhhHHHhhhhhcceeeeecccCCccc---
Confidence 4567888876 34665443 35688889999999999999888888999988 566777887777776321
Q ss_pred chhHHHHHHhhcCCe
Q 014542 339 GQYAHHWMADQSGMR 353 (423)
Q Consensus 339 ~~~~Y~~lA~~~Gl~ 353 (423)
+. ..|+..|+.
T Consensus 82 ---D~-~~a~~~gI~ 92 (129)
T d1gdha2 82 ---DL-DACKARGIK 92 (129)
T ss_dssp ---CH-HHHHHTTCE
T ss_pred ---cH-HHHHhCCCE
Confidence 22 246667775
No 10
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.15 E-value=21 Score=30.01 Aligned_cols=35 Identities=11% Similarity=0.332 Sum_probs=21.0
Q ss_pred EEEEEEec---C--CCcccCHHHHHHHHHhhccccCCcEEEEEeCCC
Q 014542 247 RLTLLMRR---G--SRSFKNATAVTEIFAEECAMVDGCVLKVEQSED 288 (423)
Q Consensus 247 rv~li~R~---~--~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ 288 (423)
||++|.=. + ++.+ .+++++.+++ .|.+|+++++..
T Consensus 4 KiLiI~ghp~~~S~t~~l--~~~~~~~~~~-----~g~ev~~~dL~~ 43 (230)
T d2qwxa1 4 KVLIVYAHQEPKSFNGSL--KNVAVDELSR-----QGCTVTVSDLYA 43 (230)
T ss_dssp EEEEEECCSCTTSHHHHH--HHHHHHHHHH-----TTCEEEEEETTT
T ss_pred EEEEEEeCCCCccHHHHH--HHHHHHHHHh-----CCCEEEEEEccc
Confidence 55777632 1 2333 2556666766 588999987643
No 11
>d5nula_ c.23.5.1 (A:) Flavodoxin {Clostridium beijerinckii [TaxId: 1520]}
Probab=35.64 E-value=16 Score=28.16 Aligned_cols=57 Identities=12% Similarity=0.262 Sum_probs=35.8
Q ss_pred eEEEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEE-Ee--echhhh
Q 014542 246 IRLTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVV-AS--PHGAQL 312 (423)
Q Consensus 246 irv~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVl-Ig--vHGAgL 312 (423)
+.|+|.|+.| |-++|.+++.+.+.. .|.++.+....+.+..+ +.++|.+ || .||+|.
T Consensus 1 i~IvY~S~tG-----nT~~vA~~ia~~l~~-~g~~v~~~~~~~~~~~~----l~~~~~~i~g~pt~~~g~ 60 (138)
T d5nula_ 1 MKIVYWSGTG-----NTEKMAELIAKGIIE-SGKDVNTINVSDVNIDE----LLNEDILILGCSAMTDEV 60 (138)
T ss_dssp CEEEEECSSS-----HHHHHHHHHHHHHHH-TTCCCEEEEGGGCCHHH----HTTCSEEEEEECCBTTTB
T ss_pred CEEEEECcCh-----HHHHHHHHHHHHHHh-cCCcceecccccccccc----cccCCeEEEEEeccCCCC
Confidence 3578999876 344555555544332 68888888887777654 3455544 43 387765
No 12
>d1rlia_ c.23.5.6 (A:) Hypothetical protein YwqN {Bacillus subtilis [TaxId: 1423]}
Probab=34.46 E-value=29 Score=27.41 Aligned_cols=53 Identities=9% Similarity=0.098 Sum_probs=32.0
Q ss_pred EEEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCC--------------------HHHHHHHhcCCcEEEee
Q 014542 248 LTLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLS--------------------FCDQVKVMTGTDVVASP 307 (423)
Q Consensus 248 v~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls--------------------~~eQv~l~~~adVlIgv 307 (423)
|++|+=. .|+=-|-..+++++.+ |++++.++..++. +.+-++.+.+||++|=.
T Consensus 2 Ilii~gS-pr~~gnt~~l~~~~~~------g~e~e~i~l~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~l~~AD~ii~~ 74 (179)
T d1rlia_ 2 IAVINGG-TRSGGNTDVLAEKAVQ------GFDAEHIYLQKYPIQPIEDLRHAQGGFRPVQDDYDSIIERILQCHILIFA 74 (179)
T ss_dssp EEEEESS-CSSCCHHHHHHHHHHT------TTCCEEEEC-----------------------CHHHHHHHHHTCSEEEEE
T ss_pred EEEEECC-CCCCCHHHHHHHHHHc------CCCeeEEEhhhhccCCccchhhhhcCCCCccHHHHHHHHHHHhCCeEEEe
Confidence 4566532 3444567777777765 5556655543332 45668899999998854
No 13
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}
Probab=33.21 E-value=23 Score=29.24 Aligned_cols=54 Identities=6% Similarity=0.087 Sum_probs=34.7
Q ss_pred eeEEEEEEecC-CCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHH---------------------HHHHHhcCCc
Q 014542 245 IIRLTLLMRRG-SRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFC---------------------DQVKVMTGTD 302 (423)
Q Consensus 245 ~irv~li~R~~-~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~---------------------eQv~l~~~ad 302 (423)
++-|+|.|+.| ++.+. +++.+.+++ .|.+++++...++.+. +.++-+.++|
T Consensus 4 kilivy~S~~GnT~~la--~~ia~g~~~-----~G~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~aD 76 (201)
T d1ydga_ 4 KLAIVFYSSTGTGYAMA--QEAAEAGRA-----AGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAE 76 (201)
T ss_dssp EEEEEECCSSSHHHHHH--HHHHHHHHH-----TTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCS
T ss_pred EEEEEEeCCCcHHHHHH--HHHHHHHHh-----cCCEEEEEEccccCccchhhhhhHhhcCCCcccCchhhhhhhHhhCC
Confidence 55567777765 34333 445566655 6899999887654432 2366778899
Q ss_pred EEE
Q 014542 303 VVA 305 (423)
Q Consensus 303 VlI 305 (423)
.||
T Consensus 77 ~ii 79 (201)
T d1ydga_ 77 AIV 79 (201)
T ss_dssp EEE
T ss_pred EeE
Confidence 887
No 14
>d1xova2 c.56.5.6 (A:1-180) Endolysin Ply, catalytic domain {Bacteriophage Psa [TaxId: 171618]}
Probab=26.51 E-value=50 Score=27.05 Aligned_cols=34 Identities=21% Similarity=0.117 Sum_probs=23.3
Q ss_pred CCcEEEEEeCC-----CCCHHHHHHHh--cCCcEEEeechh
Q 014542 277 DGCVLKVEQSE-----DLSFCDQVKVM--TGTDVVASPHGA 310 (423)
Q Consensus 277 ~G~~v~vv~~~-----~ls~~eQv~l~--~~adVlIgvHGA 310 (423)
.|++|.++... ..++.+.+... .++|++|+.|--
T Consensus 41 ~G~~V~~~~~~~~~~~~~~L~~R~~~an~~~aDl~iSiH~N 81 (180)
T d1xova2 41 EGHNVKTFIDRTSTTQSANLNKIVNWHNANPADVHISVHLN 81 (180)
T ss_dssp TTCEEEEEEESSCCSHHHHHHHHHHHHHHSCCSEEEEEEEE
T ss_pred CCCeEEEEEccCCCccccCHHHHHHHHHhcCCCEEEEeccc
Confidence 68888776321 23466666655 789999999953
No 15
>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=25.67 E-value=23 Score=29.31 Aligned_cols=59 Identities=19% Similarity=0.139 Sum_probs=36.1
Q ss_pred EEEEecCCCcccCHHHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcCCcEEEeechhh
Q 014542 249 TLLMRRGSRSFKNATAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTGTDVVASPHGAQ 311 (423)
Q Consensus 249 ~li~R~~~R~i~Ne~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~adVlIgvHGAg 311 (423)
++|+ .++-.++|+++++++|++. +..|+-..|...+ -++..--.+...-.|+++||=||
T Consensus 123 ilIN-~~RG~ivd~~aL~~aL~~~--~i~~aalDV~~~e-~p~~~~~~l~~~~nvi~TPHiaG 181 (181)
T d1qp8a1 123 VFVN-VGRAEVLDRDGVLRILKER--PQFIFASDVWWGR-NDFAKDAEFFSLPNVVATPWVAG 181 (181)
T ss_dssp EEEE-CSCGGGBCHHHHHHHHHHC--TTCEEEESCCTTT-TCCGGGHHHHTSTTEEECCSCSS
T ss_pred eEEe-ccccccccchhhhhhcccC--cEEEEEEecCCCC-CCCCCCChHHcCCCEEeccccCc
Confidence 4444 2223499999999999973 2234433333222 22223345677788999999776
No 16
>d1jwqa_ c.56.5.6 (A:) N-acetylmuramoyl-L-alanine amidase CwlV {Paenibacillus polymyxa [TaxId: 1406]}
Probab=23.73 E-value=49 Score=26.67 Aligned_cols=90 Identities=16% Similarity=0.151 Sum_probs=47.7
Q ss_pred HHHHHHhhccccCCcEEEEEe--CCCCCHHHHHHHhc--CCcEEEeechhhhhhhcccCCCcEEEEEeeCCcccccccch
Q 014542 265 VTEIFAEECAMVDGCVLKVEQ--SEDLSFCDQVKVMT--GTDVVASPHGAQLTNMLFMDRNSSVMEFFPKGWLELAGVGQ 340 (423)
Q Consensus 265 v~~~l~~~~~~~~G~~v~vv~--~~~ls~~eQv~l~~--~adVlIgvHGAgLTN~lFm~pgs~viEi~P~g~~~~~g~~~ 340 (423)
+...|++.+....|+.|.... ...+++.+-+...+ ++|++|+.|=-+..+- .+.=.|++-+... ......
T Consensus 33 ia~~l~~~L~~~~~~~v~~tr~~D~~~~l~~R~~~an~~~ad~~iSiH~Na~~~~-----~~~G~e~~~~~~~-s~~la~ 106 (179)
T d1jwqa_ 33 MALKVESILKQNPKLEVVLTRSDDTFLELKQRVKVAENLKANVFVSIHANSSGSS-----ASNGTETYYQRSA-SKAFAN 106 (179)
T ss_dssp HHHHHHHHHHTCTTEEEEESCSSSCCCCHHHHHHHHHHTTCSEEEEEEEECCSST-----TCCCEEEEECSGG-GHHHHH
T ss_pred HHHHHHHHHHhhcCceeeeccCCCccccHHHHHHHhhccCCCEEEEeccCCCCCC-----CCceEEEEEeecc-cHHHHH
Confidence 344444444333465554442 24578888777664 6899999997664442 1222344433211 101122
Q ss_pred hHHHHHHhhcCCeeeeeecC
Q 014542 341 YAHHWMADQSGMRHRGAWWD 360 (423)
Q Consensus 341 ~~Y~~lA~~~Gl~h~~~w~d 360 (423)
.....+++..|+...+...+
T Consensus 107 ~i~~~l~~~~~~~~rgvk~~ 126 (179)
T d1jwqa_ 107 VMHKYFAPATGLTDRGIRYG 126 (179)
T ss_dssp HHHHHHHHHHCSCEEEEEEC
T ss_pred HHHHHHhhhcCCCCCCeeec
Confidence 34455677778876665433
No 17
>d1d4aa_ c.23.5.3 (A:) NAD(P)H:quinone reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.02 E-value=59 Score=28.43 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=11.5
Q ss_pred HHHHHHHhcCCcEEEe
Q 014542 291 FCDQVKVMTGTDVVAS 306 (423)
Q Consensus 291 ~~eQv~l~~~adVlIg 306 (423)
+.+.++.+..||+||=
T Consensus 84 i~~~~~~l~~AD~IV~ 99 (273)
T d1d4aa_ 84 IVAEQKKLEAADLVIF 99 (273)
T ss_dssp HHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHhCCEEEE
Confidence 3456678889998763
No 18
>d1y9ua_ c.94.1.1 (A:) Ferric-binding protein FbpA {Bordetella pertussis [TaxId: 520]}
Probab=21.43 E-value=70 Score=26.53 Aligned_cols=44 Identities=16% Similarity=0.291 Sum_probs=30.5
Q ss_pred HHHHHHHHhhccccCCcEEEEEeCCCCCHHHHHHHhcC---CcEEEeechhh
Q 014542 263 TAVTEIFAEECAMVDGCVLKVEQSEDLSFCDQVKVMTG---TDVVASPHGAQ 311 (423)
Q Consensus 263 ~ev~~~l~~~~~~~~G~~v~vv~~~~ls~~eQv~l~~~---adVlIgvHGAg 311 (423)
++++++.+++ .|++|+++...+ .+.++++.-.. +||+++.-...
T Consensus 15 ~~li~~Fek~----tGIkV~~~~~~~-~~~~kl~ae~~~~~~DVv~~~~~~~ 61 (318)
T d1y9ua_ 15 QPLLDAFAKD----SGIKVNTVFVKD-GLLERVRAEGDKSPADVLMTVDIGN 61 (318)
T ss_dssp HHHHHHHHHH----HCCEEEEEECSS-CHHHHHHHHGGGCCCCEEEEESHHH
T ss_pred HHHHHHHHHh----hCCEEEEEECCH-HHHHHHHhcCCCCCCCEEEeCCHHH
Confidence 5578888775 699998886543 45667665443 99999765433
Done!