Query 014544
Match_columns 423
No_of_seqs 562 out of 2183
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 06:11:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014544.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014544hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1163 Casein kinase (serine/ 100.0 8.7E-56 1.9E-60 388.0 21.2 293 3-295 11-303 (341)
2 KOG1165 Casein kinase (serine/ 100.0 2.3E-53 5E-58 388.1 29.1 291 4-294 25-317 (449)
3 KOG0592 3-phosphoinositide-dep 100.0 6.7E-50 1.5E-54 386.2 26.4 266 6-293 72-349 (604)
4 KOG0615 Serine/threonine prote 100.0 8.5E-51 1.8E-55 380.8 16.5 255 4-271 169-436 (475)
5 KOG0581 Mitogen-activated prot 100.0 4.6E-50 1E-54 373.2 18.4 254 6-279 78-340 (364)
6 KOG0575 Polo-like serine/threo 100.0 2.3E-49 4.9E-54 388.3 24.0 251 7-279 18-274 (592)
7 KOG0598 Ribosomal protein S6 k 100.0 1.4E-49 3E-54 369.8 18.0 260 5-293 23-292 (357)
8 KOG0595 Serine/threonine-prote 100.0 1E-47 2.2E-52 360.4 28.8 249 6-269 9-265 (429)
9 KOG0593 Predicted protein kina 100.0 3.9E-48 8.4E-53 349.9 15.9 254 7-271 2-283 (396)
10 KOG0591 NIMA (never in mitosis 100.0 6.5E-49 1.4E-53 351.7 10.7 249 7-271 19-280 (375)
11 KOG0192 Tyrosine kinase specif 100.0 9.6E-47 2.1E-51 366.1 24.7 257 6-281 40-308 (362)
12 KOG0600 Cdc2-related protein k 100.0 5.4E-46 1.2E-50 356.4 28.7 267 6-283 116-409 (560)
13 KOG0661 MAPK related serine/th 100.0 1.6E-47 3.5E-52 364.5 14.9 257 4-271 7-290 (538)
14 KOG0583 Serine/threonine prote 100.0 6.7E-46 1.5E-50 363.1 26.2 254 4-279 14-280 (370)
15 KOG0197 Tyrosine kinases [Sign 100.0 1.2E-46 2.6E-51 365.3 19.7 255 7-279 206-464 (468)
16 KOG0605 NDR and related serine 100.0 1.2E-45 2.7E-50 356.8 21.5 269 4-294 138-457 (550)
17 KOG0616 cAMP-dependent protein 100.0 7.3E-46 1.6E-50 334.4 18.3 260 6-293 43-308 (355)
18 KOG0198 MEKK and related serin 100.0 4.4E-46 9.5E-51 351.5 16.8 252 7-271 17-275 (313)
19 KOG0582 Ste20-like serine/thre 100.0 2E-44 4.3E-49 341.0 25.0 264 5-280 24-299 (516)
20 KOG0663 Protein kinase PITSLRE 100.0 6.3E-45 1.4E-49 333.1 18.0 261 7-280 76-367 (419)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.7E-44 1E-48 349.4 24.7 263 3-279 3-337 (338)
22 KOG0597 Serine-threonine prote 100.0 1.6E-44 3.5E-49 349.4 20.1 245 7-271 2-250 (808)
23 KOG0588 Serine/threonine prote 100.0 2.1E-44 4.5E-49 354.8 20.8 244 7-271 12-262 (786)
24 KOG0659 Cdk activating kinase 100.0 3E-44 6.6E-49 319.6 19.2 260 7-279 2-286 (318)
25 KOG0578 p21-activated serine/t 100.0 1.2E-44 2.5E-49 352.5 17.5 253 7-279 273-528 (550)
26 KOG0201 Serine/threonine prote 100.0 1.5E-45 3.2E-50 348.4 10.3 253 6-279 12-268 (467)
27 cd05612 STKc_PRKX_like Catalyt 100.0 1E-43 2.3E-48 339.9 21.8 241 7-270 1-252 (291)
28 KOG0694 Serine/threonine prote 100.0 5.3E-44 1.2E-48 354.3 19.7 243 4-266 365-613 (694)
29 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.8E-43 1.5E-47 333.7 26.1 254 7-271 5-284 (288)
30 cd05587 STKc_cPKC Catalytic do 100.0 6.8E-43 1.5E-47 339.4 25.0 240 8-266 1-246 (324)
31 PTZ00263 protein kinase A cata 100.0 4.9E-43 1.1E-47 341.2 23.3 237 6-265 17-259 (329)
32 cd07848 STKc_CDKL5 Catalytic d 100.0 1E-42 2.2E-47 331.8 24.7 255 7-271 1-283 (287)
33 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.7E-42 5.9E-47 331.9 27.3 253 6-271 4-287 (303)
34 KOG0610 Putative serine/threon 100.0 2.2E-43 4.7E-48 331.5 19.0 270 6-295 76-405 (459)
35 KOG0667 Dual-specificity tyros 100.0 2.4E-43 5.3E-48 349.3 20.2 259 2-271 181-501 (586)
36 cd05631 STKc_GRK4 Catalytic do 100.0 1E-42 2.3E-47 332.0 23.6 248 8-271 1-260 (285)
37 cd05096 PTKc_DDR1 Catalytic do 100.0 2.2E-42 4.7E-47 332.6 25.8 262 4-274 2-303 (304)
38 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.6E-43 1.7E-47 340.3 22.9 249 7-271 1-256 (333)
39 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.3E-42 4.9E-47 337.1 26.1 260 8-278 1-294 (338)
40 cd07862 STKc_CDK6 Catalytic do 100.0 4.8E-42 1E-46 327.7 27.1 254 7-271 1-286 (290)
41 KOG0193 Serine/threonine prote 100.0 1.3E-43 2.8E-48 346.4 16.0 259 4-278 389-655 (678)
42 cd05616 STKc_cPKC_beta Catalyt 100.0 1.9E-42 4.1E-47 336.2 23.7 240 8-266 1-246 (323)
43 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-42 2.6E-47 337.6 22.0 239 13-271 1-250 (323)
44 KOG0658 Glycogen synthase kina 100.0 3.7E-43 8.1E-48 326.3 17.4 259 6-278 23-310 (364)
45 cd05106 PTKc_CSF-1R Catalytic 100.0 2.7E-42 5.9E-47 341.7 24.4 258 6-277 37-373 (374)
46 KOG0660 Mitogen-activated prot 100.0 7.7E-43 1.7E-47 323.6 19.0 263 5-278 20-314 (359)
47 PTZ00036 glycogen synthase kin 100.0 6.9E-42 1.5E-46 345.5 26.7 261 4-278 63-355 (440)
48 PHA03212 serine/threonine kina 100.0 6.5E-42 1.4E-46 340.6 26.1 257 5-278 90-380 (391)
49 cd05064 PTKc_EphR_A10 Catalyti 100.0 5.8E-42 1.3E-46 323.4 24.5 256 4-276 2-265 (266)
50 PHA02882 putative serine/threo 100.0 1.1E-41 2.3E-46 326.5 26.7 263 1-273 6-293 (294)
51 PTZ00284 protein kinase; Provi 100.0 4.2E-42 9.2E-47 350.1 25.2 256 5-271 127-437 (467)
52 cd05615 STKc_cPKC_alpha Cataly 100.0 7E-42 1.5E-46 332.2 25.2 261 8-292 1-267 (323)
53 cd05104 PTKc_Kit Catalytic dom 100.0 6.1E-42 1.3E-46 339.4 24.3 257 6-276 34-374 (375)
54 PTZ00426 cAMP-dependent protei 100.0 6.2E-42 1.3E-46 334.8 23.8 244 4-270 27-282 (340)
55 cd05614 STKc_MSK2_N N-terminal 100.0 4.8E-42 1E-46 334.5 22.8 244 8-266 1-256 (332)
56 KOG0033 Ca2+/calmodulin-depend 100.0 4.8E-44 1E-48 314.7 7.8 254 4-271 8-266 (355)
57 cd06650 PKc_MEK1 Catalytic dom 100.0 1.6E-41 3.4E-46 331.1 25.9 272 4-291 2-316 (333)
58 cd05591 STKc_nPKC_epsilon Cata 100.0 5.6E-42 1.2E-46 332.6 22.6 235 13-266 1-241 (321)
59 KOG0611 Predicted serine/threo 100.0 4.4E-43 9.5E-48 327.7 14.1 247 6-274 52-305 (668)
60 cd05585 STKc_YPK1_like Catalyt 100.0 3.9E-42 8.5E-47 332.4 21.3 239 15-273 1-245 (312)
61 cd05590 STKc_nPKC_eta Catalyti 100.0 8.4E-42 1.8E-46 331.3 23.6 237 13-268 1-243 (320)
62 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-41 2.6E-46 329.6 24.5 236 13-267 1-242 (316)
63 cd05589 STKc_PKN Catalytic dom 100.0 1.4E-41 3.1E-46 330.2 25.0 239 9-267 1-247 (324)
64 cd06649 PKc_MEK2 Catalytic dom 100.0 2.3E-41 5E-46 329.7 26.4 260 4-279 2-306 (331)
65 cd07863 STKc_CDK4 Catalytic do 100.0 3.6E-41 7.8E-46 321.2 27.2 253 8-271 1-284 (288)
66 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.6E-41 5.7E-46 325.9 26.2 259 7-278 6-290 (309)
67 KOG0585 Ca2+/calmodulin-depend 100.0 1.5E-42 3.3E-47 330.2 17.1 262 3-280 93-378 (576)
68 cd05595 STKc_PKB_beta Catalyti 100.0 9.5E-42 2.1E-46 331.3 23.0 239 13-271 1-250 (323)
69 KOG0580 Serine/threonine prote 100.0 9.3E-43 2E-47 305.9 14.2 245 6-271 21-272 (281)
70 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-41 2.8E-46 332.9 23.8 253 5-271 33-292 (382)
71 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-41 2.3E-46 331.7 23.1 239 13-271 1-250 (328)
72 KOG0594 Protein kinase PCTAIRE 100.0 9.7E-42 2.1E-46 317.1 21.7 254 8-271 12-301 (323)
73 cd05620 STKc_nPKC_delta Cataly 100.0 1.7E-41 3.7E-46 328.5 24.4 238 13-269 1-245 (316)
74 cd05628 STKc_NDR1 Catalytic do 100.0 1.5E-41 3.2E-46 335.3 24.4 265 7-293 1-304 (363)
75 KOG0589 Serine/threonine prote 100.0 1.2E-42 2.6E-47 336.3 15.8 250 6-272 3-258 (426)
76 KOG1989 ARK protein kinase fam 100.0 1.4E-41 3E-46 346.6 24.0 265 6-283 36-318 (738)
77 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.1E-42 8.9E-47 337.2 19.2 253 7-271 1-284 (350)
78 KOG0596 Dual specificity; seri 100.0 1.9E-42 4.1E-47 334.7 16.3 254 4-271 358-626 (677)
79 cd05599 STKc_NDR_like Catalyti 100.0 1E-41 2.3E-46 336.3 22.0 255 7-271 1-295 (364)
80 cd05601 STKc_CRIK Catalytic do 100.0 4.9E-42 1.1E-46 334.2 19.0 248 7-271 1-262 (330)
81 PHA02988 hypothetical protein; 100.0 3.5E-41 7.5E-46 321.3 24.2 242 13-277 26-280 (283)
82 KOG4721 Serine/threonine prote 100.0 7.6E-43 1.6E-47 337.7 12.6 238 11-274 128-366 (904)
83 cd07876 STKc_JNK2 Catalytic do 100.0 3.1E-41 6.7E-46 332.4 24.3 254 4-271 18-314 (359)
84 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-41 7.2E-46 326.7 24.1 235 13-266 1-241 (318)
85 cd05588 STKc_aPKC Catalytic do 100.0 3.2E-41 7E-46 328.4 23.9 239 13-267 1-251 (329)
86 KOG1026 Nerve growth factor re 100.0 3.3E-42 7.2E-47 349.7 17.4 260 6-281 485-767 (774)
87 cd05619 STKc_nPKC_theta Cataly 100.0 3.9E-41 8.5E-46 326.0 24.0 238 13-269 1-245 (316)
88 cd05054 PTKc_VEGFR Catalytic d 100.0 3.9E-41 8.4E-46 328.9 24.0 261 5-279 5-336 (337)
89 PHA03207 serine/threonine kina 100.0 5E-41 1.1E-45 334.8 25.2 262 4-280 89-381 (392)
90 PTZ00283 serine/threonine prot 100.0 3.3E-41 7E-46 344.9 24.4 254 3-271 28-296 (496)
91 cd05108 PTKc_EGFR Catalytic do 100.0 7.1E-41 1.5E-45 324.0 25.2 261 3-280 3-272 (316)
92 cd05602 STKc_SGK1 Catalytic do 100.0 3.6E-41 7.7E-46 327.5 22.8 255 13-293 1-262 (325)
93 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.5E-41 5.5E-46 328.9 21.7 261 13-293 1-271 (327)
94 cd05105 PTKc_PDGFR_alpha Catal 100.0 7E-41 1.5E-45 333.7 25.4 259 6-278 36-399 (400)
95 PTZ00266 NIMA-related protein 100.0 5.4E-40 1.2E-44 348.1 33.5 254 3-271 9-294 (1021)
96 cd05052 PTKc_Abl Catalytic dom 100.0 9.2E-41 2E-45 314.4 24.8 257 4-277 3-263 (263)
97 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-41 3.7E-46 329.8 20.3 239 13-271 1-251 (325)
98 KOG0194 Protein tyrosine kinas 100.0 5.1E-42 1.1E-46 337.8 16.7 258 6-281 156-425 (474)
99 cd05109 PTKc_HER2 Catalytic do 100.0 1.5E-40 3.2E-45 315.8 26.2 263 1-280 1-272 (279)
100 cd05618 STKc_aPKC_iota Catalyt 100.0 3.9E-41 8.5E-46 327.8 22.8 261 13-293 1-273 (329)
101 cd05597 STKc_DMPK_like Catalyt 100.0 6.9E-41 1.5E-45 326.4 24.5 252 7-271 1-265 (331)
102 cd05605 STKc_GRK4_like Catalyt 100.0 6.7E-41 1.4E-45 319.5 23.7 248 8-271 1-260 (285)
103 cd05575 STKc_SGK Catalytic dom 100.0 7.1E-41 1.5E-45 325.1 23.9 235 13-267 1-242 (323)
104 cd05048 PTKc_Ror Catalytic Dom 100.0 9.8E-41 2.1E-45 317.4 24.2 256 4-275 2-282 (283)
105 cd05598 STKc_LATS Catalytic do 100.0 2E-41 4.4E-46 335.8 20.0 255 7-271 1-300 (376)
106 cd05596 STKc_ROCK Catalytic do 100.0 6.2E-41 1.4E-45 331.5 23.4 251 5-271 41-303 (370)
107 cd05626 STKc_LATS2 Catalytic d 100.0 4.7E-41 1E-45 333.8 22.3 254 7-271 1-304 (381)
108 KOG2345 Serine/threonine prote 100.0 2.7E-42 5.9E-47 304.3 11.6 268 3-277 17-301 (302)
109 KOG4717 Serine/threonine prote 100.0 2.1E-41 4.5E-46 324.5 18.4 248 5-271 16-269 (864)
110 cd06646 STKc_MAP4K5 Catalytic 100.0 9E-41 2E-45 314.9 22.7 257 1-272 3-265 (267)
111 cd05584 STKc_p70S6K Catalytic 100.0 9.8E-41 2.1E-45 324.2 23.4 240 12-271 1-255 (323)
112 cd07874 STKc_JNK3 Catalytic do 100.0 1.6E-40 3.4E-45 326.9 25.1 253 5-271 15-310 (355)
113 PLN00034 mitogen-activated pro 100.0 6.3E-41 1.4E-45 329.5 22.0 246 6-271 73-327 (353)
114 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-40 2.7E-45 328.7 24.2 250 5-271 22-317 (364)
115 cd05629 STKc_NDR_like_fungal C 100.0 4.9E-41 1.1E-45 333.2 21.1 253 7-271 1-304 (377)
116 cd05082 PTKc_Csk Catalytic dom 100.0 1.5E-40 3.3E-45 311.6 23.2 248 6-275 5-255 (256)
117 cd05089 PTKc_Tie1 Catalytic do 100.0 2.3E-40 5.1E-45 317.5 24.9 258 7-282 2-281 (297)
118 cd05624 STKc_MRCK_beta Catalyt 100.0 7E-41 1.5E-45 326.3 21.5 250 7-269 1-263 (331)
119 cd05625 STKc_LATS1 Catalytic d 100.0 7.6E-41 1.6E-45 332.4 21.8 254 7-270 1-303 (382)
120 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4E-40 8.7E-45 316.4 26.1 254 7-271 6-285 (301)
121 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-40 2.3E-45 325.1 22.3 252 7-271 1-265 (332)
122 cd05608 STKc_GRK1 Catalytic do 100.0 1.7E-40 3.7E-45 315.9 23.0 241 15-271 1-256 (280)
123 cd05627 STKc_NDR2 Catalytic do 100.0 5.4E-41 1.2E-45 330.9 20.2 268 7-293 1-304 (360)
124 PTZ00267 NIMA-related protein 100.0 2.8E-40 6.2E-45 337.3 26.0 250 6-271 66-322 (478)
125 cd07853 STKc_NLK Catalytic dom 100.0 1.8E-40 3.8E-45 328.7 23.7 259 8-279 1-293 (372)
126 cd08228 STKc_Nek6 Catalytic do 100.0 5.2E-40 1.1E-44 309.6 25.7 255 7-276 2-265 (267)
127 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-40 3.2E-45 325.5 22.8 253 4-271 12-297 (343)
128 cd05049 PTKc_Trk Catalytic dom 100.0 2.1E-40 4.6E-45 314.4 23.2 254 5-274 3-279 (280)
129 cd05071 PTKc_Src Catalytic dom 100.0 4.6E-40 1E-44 309.7 25.0 255 4-277 3-261 (262)
130 cd05098 PTKc_FGFR1 Catalytic d 100.0 5.8E-40 1.3E-44 316.3 26.1 263 4-281 15-304 (307)
131 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-40 3.5E-45 328.5 22.2 251 5-271 41-303 (370)
132 cd05582 STKc_RSK_N N-terminal 100.0 4E-41 8.7E-46 326.1 17.6 237 12-268 1-245 (318)
133 KOG0599 Phosphorylase kinase g 100.0 2.4E-41 5.1E-46 301.9 14.6 265 6-286 16-299 (411)
134 cd05632 STKc_GRK5 Catalytic do 100.0 5.3E-40 1.2E-44 313.3 25.0 244 8-267 1-251 (285)
135 cd05088 PTKc_Tie2 Catalytic do 100.0 4.4E-40 9.6E-45 316.7 24.6 260 4-281 4-285 (303)
136 PF00069 Pkinase: Protein kina 100.0 3.5E-40 7.6E-45 309.0 23.2 250 9-271 1-256 (260)
137 cd05093 PTKc_TrkB Catalytic do 100.0 6E-40 1.3E-44 313.2 25.1 261 4-280 2-283 (288)
138 cd05033 PTKc_EphR Catalytic do 100.0 8.5E-40 1.8E-44 308.3 25.5 255 6-276 3-265 (266)
139 cd05622 STKc_ROCK1 Catalytic d 100.0 3.1E-40 6.7E-45 326.6 23.5 251 4-271 40-303 (371)
140 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.7E-40 1.4E-44 307.2 24.6 249 7-273 4-255 (256)
141 KOG0577 Serine/threonine prote 100.0 1.1E-41 2.4E-46 330.8 12.8 243 8-271 27-277 (948)
142 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-39 2.5E-44 315.5 26.8 256 12-271 6-313 (317)
143 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-40 2.3E-45 324.2 19.6 236 13-268 1-243 (325)
144 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.6E-40 1E-44 322.1 24.3 260 6-279 6-342 (343)
145 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-39 2.5E-44 306.5 25.8 254 4-275 3-260 (261)
146 cd05603 STKc_SGK2 Catalytic do 100.0 2E-40 4.2E-45 321.7 21.2 235 13-267 1-242 (321)
147 cd05607 STKc_GRK7 Catalytic do 100.0 4.6E-40 9.9E-45 312.5 23.1 240 15-270 1-248 (277)
148 cd05072 PTKc_Lyn Catalytic dom 100.0 5.1E-40 1.1E-44 308.8 23.2 254 4-275 3-260 (261)
149 cd05084 PTKc_Fes Catalytic dom 100.0 9E-40 1.9E-44 305.5 24.6 246 13-274 1-251 (252)
150 cd05036 PTKc_ALK_LTK Catalytic 100.0 6.2E-40 1.3E-44 311.3 23.7 258 4-274 3-276 (277)
151 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-39 2.4E-44 313.8 25.6 259 4-276 32-301 (302)
152 KOG1095 Protein tyrosine kinas 100.0 2.3E-40 5E-45 347.5 22.4 259 6-280 691-965 (1025)
153 cd05062 PTKc_IGF-1R Catalytic 100.0 5.8E-40 1.2E-44 311.4 23.0 255 4-274 3-276 (277)
154 PHA03211 serine/threonine kina 100.0 5E-40 1.1E-44 331.8 23.8 255 4-271 166-454 (461)
155 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-39 3.9E-44 308.8 26.4 253 8-271 1-281 (285)
156 PHA03209 serine/threonine kina 100.0 6.3E-40 1.4E-44 322.9 23.9 250 6-271 65-350 (357)
157 cd05586 STKc_Sck1_like Catalyt 100.0 9.8E-41 2.1E-45 325.1 18.0 234 15-266 1-243 (330)
158 cd05097 PTKc_DDR_like Catalyti 100.0 7E-40 1.5E-44 313.9 23.5 260 6-274 4-294 (295)
159 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.2E-39 2.6E-44 313.5 25.3 261 4-279 12-299 (304)
160 cd05111 PTK_HER3 Pseudokinase 100.0 2.2E-39 4.9E-44 307.9 26.8 259 5-280 5-272 (279)
161 cd05630 STKc_GRK6 Catalytic do 100.0 1E-39 2.2E-44 311.5 24.4 248 8-271 1-260 (285)
162 cd05051 PTKc_DDR Catalytic dom 100.0 7.8E-40 1.7E-44 313.2 23.7 260 6-274 4-295 (296)
163 cd05090 PTKc_Ror1 Catalytic do 100.0 6.8E-40 1.5E-44 311.8 23.0 253 7-275 5-282 (283)
164 KOG0574 STE20-like serine/thre 100.0 8.1E-43 1.7E-47 315.0 2.7 247 8-271 34-282 (502)
165 cd05094 PTKc_TrkC Catalytic do 100.0 1.5E-39 3.4E-44 310.8 25.5 260 5-280 3-286 (291)
166 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-39 2.4E-44 310.3 24.4 258 7-277 3-282 (283)
167 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-39 2.3E-44 325.1 25.2 258 6-277 36-400 (401)
168 cd06613 STKc_MAP4K3_like Catal 100.0 1.5E-39 3.4E-44 305.1 24.9 251 7-271 3-259 (262)
169 cd07839 STKc_CDK5 Catalytic do 100.0 8E-40 1.7E-44 311.2 23.2 251 8-271 1-280 (284)
170 cd05045 PTKc_RET Catalytic dom 100.0 1.4E-39 3E-44 311.0 24.9 256 8-279 1-289 (290)
171 cd05043 PTK_Ryk Pseudokinase d 100.0 1.6E-39 3.5E-44 308.6 25.2 261 4-279 3-279 (280)
172 cd05057 PTKc_EGFR_like Catalyt 100.0 2.3E-39 5E-44 307.5 26.2 263 1-280 1-272 (279)
173 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-39 2.4E-44 306.1 23.5 250 6-273 3-255 (256)
174 cd05053 PTKc_FGFR Catalytic do 100.0 1.3E-39 2.8E-44 311.3 24.4 259 4-277 9-292 (293)
175 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-39 3.2E-44 307.3 24.3 251 5-271 4-268 (272)
176 KOG4278 Protein tyrosine kinas 100.0 5.4E-40 1.2E-44 320.4 21.6 259 8-283 268-530 (1157)
177 KOG0579 Ste20-like serine/thre 100.0 5.2E-41 1.1E-45 328.0 14.5 249 7-271 32-288 (1187)
178 cd05115 PTKc_Zap-70 Catalytic 100.0 1.4E-39 3E-44 305.7 23.7 248 14-277 2-256 (257)
179 cd06645 STKc_MAP4K3 Catalytic 100.0 7.8E-40 1.7E-44 308.5 22.1 252 5-271 7-264 (267)
180 cd08219 STKc_Nek3 Catalytic do 100.0 1.6E-39 3.6E-44 304.2 24.1 246 8-271 1-251 (255)
181 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-39 4E-44 306.4 24.7 252 9-276 1-272 (273)
182 cd05059 PTKc_Tec_like Catalyti 100.0 1.3E-39 2.8E-44 305.3 23.5 250 6-273 3-255 (256)
183 cd05091 PTKc_Ror2 Catalytic do 100.0 3.9E-40 8.4E-45 313.4 20.1 254 6-275 4-282 (283)
184 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.2E-39 9.2E-44 303.0 27.0 255 7-276 2-265 (267)
185 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.8E-39 3.9E-44 305.0 24.2 254 3-275 2-259 (260)
186 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-39 2.3E-44 310.1 22.8 257 7-281 1-268 (283)
187 cd05095 PTKc_DDR2 Catalytic do 100.0 1.7E-39 3.6E-44 311.4 24.3 257 6-274 4-295 (296)
188 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-39 7.9E-44 308.4 26.6 256 7-271 1-290 (295)
189 PF07714 Pkinase_Tyr: Protein 100.0 9.5E-40 2.1E-44 307.3 22.1 248 10-273 2-259 (259)
190 PRK13184 pknD serine/threonine 100.0 2.6E-39 5.6E-44 341.6 27.8 263 7-279 2-293 (932)
191 cd05066 PTKc_EphR_A Catalytic 100.0 2E-39 4.3E-44 306.0 24.3 257 5-276 2-266 (267)
192 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.6E-40 1.4E-44 307.8 20.9 251 6-275 5-260 (261)
193 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.6E-39 7.9E-44 314.6 26.9 263 4-281 9-298 (334)
194 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.6E-39 3.5E-44 305.3 23.5 253 4-275 3-259 (260)
195 cd08529 STKc_FA2-like Catalyti 100.0 3.3E-39 7.1E-44 301.9 25.5 246 8-271 1-252 (256)
196 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-39 4.9E-44 305.8 24.6 258 6-276 3-268 (269)
197 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.7E-39 5.9E-44 305.0 25.0 258 4-276 2-267 (268)
198 cd05069 PTKc_Yes Catalytic dom 100.0 2.6E-39 5.7E-44 304.0 24.8 253 4-275 3-259 (260)
199 cd05032 PTKc_InsR_like Catalyt 100.0 1.8E-39 3.9E-44 307.6 23.7 256 3-274 2-276 (277)
200 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-39 3.4E-44 306.3 23.1 255 7-276 2-265 (267)
201 cd06644 STKc_STK10_LOK Catalyt 100.0 1.8E-39 3.9E-44 310.4 23.7 252 4-271 9-268 (292)
202 cd07831 STKc_MOK Catalytic dom 100.0 4.4E-39 9.6E-44 305.5 26.0 251 9-271 1-278 (282)
203 cd05075 PTKc_Axl Catalytic dom 100.0 2.8E-39 6.1E-44 305.4 24.2 253 9-276 1-271 (272)
204 cd05061 PTKc_InsR Catalytic do 100.0 3.7E-39 8.1E-44 307.8 25.2 258 4-277 3-279 (288)
205 cd07847 STKc_CDKL1_4 Catalytic 100.0 8.4E-39 1.8E-43 304.2 27.5 254 7-271 1-282 (286)
206 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.6E-39 1.4E-43 310.0 26.8 261 5-280 10-297 (314)
207 cd06612 STKc_MST1_2 Catalytic 100.0 1.9E-39 4.1E-44 303.5 22.3 250 6-271 2-252 (256)
208 cd05116 PTKc_Syk Catalytic dom 100.0 3.4E-39 7.4E-44 302.7 24.0 246 14-276 2-255 (257)
209 cd06625 STKc_MEKK3_like Cataly 100.0 4.9E-39 1.1E-43 302.1 24.9 250 7-271 2-259 (263)
210 cd06619 PKc_MKK5 Catalytic dom 100.0 3E-39 6.6E-44 306.9 23.5 244 7-271 1-252 (279)
211 cd08223 STKc_Nek4 Catalytic do 100.0 4.5E-39 9.7E-44 301.3 24.3 247 8-271 1-253 (257)
212 cd06654 STKc_PAK1 Catalytic do 100.0 5.2E-39 1.1E-43 308.2 25.1 248 6-271 19-269 (296)
213 cd06643 STKc_SLK Catalytic dom 100.0 2.9E-39 6.4E-44 307.3 22.9 249 7-271 5-261 (282)
214 cd07845 STKc_CDK10 Catalytic d 100.0 9.9E-39 2.1E-43 307.9 26.8 264 6-282 6-298 (309)
215 cd06615 PKc_MEK Catalytic doma 100.0 5.2E-39 1.1E-43 309.9 24.7 257 7-279 1-292 (308)
216 cd05034 PTKc_Src_like Catalyti 100.0 5.9E-39 1.3E-43 301.4 24.2 254 4-275 3-260 (261)
217 cd00192 PTKc Catalytic domain 100.0 6.1E-39 1.3E-43 300.2 24.0 245 13-273 1-261 (262)
218 cd05092 PTKc_TrkA Catalytic do 100.0 5.5E-39 1.2E-43 305.3 23.9 255 4-274 2-279 (280)
219 cd06638 STKc_myosinIIIA Cataly 100.0 8E-39 1.7E-43 304.7 24.9 252 5-271 16-282 (286)
220 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.4E-39 7.3E-44 306.8 22.2 251 5-271 14-278 (282)
221 cd05110 PTKc_HER4 Catalytic do 100.0 8.2E-39 1.8E-43 307.8 24.9 262 2-280 2-272 (303)
222 cd06611 STKc_SLK_like Catalyti 100.0 3E-39 6.4E-44 306.9 21.5 249 7-271 5-261 (280)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.5E-39 2.1E-43 301.0 24.8 251 8-271 1-263 (267)
224 cd05047 PTKc_Tie Catalytic dom 100.0 4.8E-39 1E-43 304.0 22.8 247 13-277 1-269 (270)
225 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-38 2.5E-43 308.2 26.0 256 12-271 6-313 (317)
226 cd05058 PTKc_Met_Ron Catalytic 100.0 9.4E-39 2E-43 300.1 24.6 253 13-278 1-261 (262)
227 cd06616 PKc_MKK4 Catalytic dom 100.0 3.2E-39 6.9E-44 307.9 21.6 252 7-271 4-266 (288)
228 cd07844 STKc_PCTAIRE_like Cata 100.0 1.4E-38 3E-43 304.0 26.0 254 7-271 5-287 (291)
229 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 7.3E-39 1.6E-43 304.8 23.8 260 6-276 3-283 (284)
230 cd06608 STKc_myosinIII_like Ca 100.0 9.9E-39 2.1E-43 301.4 24.3 251 6-271 5-271 (275)
231 cd05039 PTKc_Csk_like Catalyti 100.0 9.3E-39 2E-43 299.3 23.9 249 4-275 3-255 (256)
232 KOG0690 Serine/threonine prote 100.0 1.3E-40 2.9E-45 303.5 10.7 262 4-292 165-434 (516)
233 cd05083 PTKc_Chk Catalytic dom 100.0 6.1E-39 1.3E-43 300.3 22.3 246 5-274 4-252 (254)
234 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.3E-38 5E-43 302.5 26.7 252 7-271 5-287 (291)
235 cd07832 STKc_CCRK Catalytic do 100.0 1.9E-38 4.2E-43 301.7 26.1 254 8-271 1-281 (286)
236 cd06655 STKc_PAK2 Catalytic do 100.0 1.6E-38 3.4E-43 304.9 25.6 252 7-278 19-273 (296)
237 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-38 2.3E-43 311.5 24.9 257 5-271 3-291 (336)
238 cd05073 PTKc_Hck Catalytic dom 100.0 1.6E-38 3.4E-43 298.7 25.1 254 3-275 2-259 (260)
239 KOG0612 Rho-associated, coiled 100.0 1.7E-40 3.8E-45 343.1 12.6 263 4-294 72-350 (1317)
240 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 4.7E-39 1E-43 306.3 21.6 259 7-276 4-283 (284)
241 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 7.2E-39 1.6E-43 305.1 22.7 256 7-281 1-269 (286)
242 cd05580 STKc_PKA Catalytic dom 100.0 1.5E-38 3.2E-43 303.9 24.8 235 7-264 1-241 (290)
243 cd08227 PK_STRAD_alpha Pseudok 100.0 8.4E-39 1.8E-43 311.1 23.5 254 11-271 2-306 (327)
244 cd06630 STKc_MEKK1 Catalytic d 100.0 1.1E-38 2.3E-43 300.6 23.3 254 8-271 1-263 (268)
245 cd05060 PTKc_Syk_like Catalyti 100.0 1.8E-38 4E-43 297.6 24.7 247 13-276 1-255 (257)
246 KOG1187 Serine/threonine prote 100.0 3.6E-39 7.7E-44 314.9 20.5 256 7-277 75-353 (361)
247 cd05056 PTKc_FAK Catalytic dom 100.0 3E-38 6.5E-43 298.3 26.3 258 4-279 3-268 (270)
248 cd07841 STKc_CDK7 Catalytic do 100.0 2.2E-38 4.9E-43 303.5 25.4 253 8-271 1-281 (298)
249 KOG0983 Mitogen-activated prot 100.0 3.8E-40 8.1E-45 294.3 11.9 266 8-290 93-365 (391)
250 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1E-38 2.2E-43 304.0 22.5 251 5-272 3-266 (284)
251 cd07850 STKc_JNK Catalytic dom 100.0 1.6E-38 3.4E-43 312.5 24.3 254 4-271 13-310 (353)
252 cd06639 STKc_myosinIIIB Cataly 100.0 3.2E-38 6.8E-43 301.6 25.7 251 6-271 21-286 (291)
253 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1E-38 2.3E-43 303.1 22.2 260 6-276 3-283 (284)
254 cd08221 STKc_Nek9 Catalytic do 100.0 5.7E-38 1.2E-42 293.8 26.7 247 8-272 1-253 (256)
255 cd08220 STKc_Nek8 Catalytic do 100.0 2.5E-38 5.3E-43 295.9 24.1 246 8-271 1-252 (256)
256 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-38 4.9E-43 301.4 24.1 254 7-271 1-282 (286)
257 cd05574 STKc_phototropin_like 100.0 3.3E-38 7.2E-43 305.1 25.5 255 7-271 1-288 (316)
258 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-38 3.2E-43 304.8 22.8 270 4-290 12-289 (296)
259 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-38 3.4E-43 305.0 22.9 248 6-271 18-268 (297)
260 cd05050 PTKc_Musk Catalytic do 100.0 2.5E-38 5.5E-43 301.8 24.2 254 5-274 3-287 (288)
261 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.1E-38 6.8E-43 307.3 25.1 252 5-271 8-287 (328)
262 cd05609 STKc_MAST Catalytic do 100.0 3.9E-38 8.4E-43 303.3 25.4 258 7-274 1-272 (305)
263 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-38 6.8E-43 303.9 24.7 263 6-271 7-307 (311)
264 cd05085 PTKc_Fer Catalytic dom 100.0 4.5E-38 9.7E-43 293.5 24.9 244 13-274 1-249 (250)
265 cd06609 STKc_MST3_like Catalyt 100.0 2.7E-38 5.9E-43 299.3 23.8 252 7-279 1-256 (274)
266 PLN00009 cyclin-dependent kina 100.0 8.3E-38 1.8E-42 299.1 27.3 261 7-279 2-289 (294)
267 cd07836 STKc_Pho85 Catalytic d 100.0 6E-38 1.3E-42 298.2 26.0 253 8-271 1-280 (284)
268 cd07833 STKc_CDKL Catalytic do 100.0 4.6E-38 1E-42 299.4 25.3 255 7-271 1-284 (288)
269 cd05040 PTKc_Ack_like Catalyti 100.0 3.3E-38 7.3E-43 295.5 23.8 247 13-274 1-256 (257)
270 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.6E-38 7.7E-43 297.8 24.0 250 13-274 1-268 (269)
271 cd07860 STKc_CDK2_3 Catalytic 100.0 4.7E-38 1E-42 299.0 24.9 253 8-271 1-280 (284)
272 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-38 6.6E-43 302.0 23.6 254 7-271 5-289 (293)
273 KOG4257 Focal adhesion tyrosin 100.0 3.6E-39 7.9E-44 315.0 17.4 256 9-282 391-655 (974)
274 cd05041 PTKc_Fes_like Catalyti 100.0 5.3E-38 1.2E-42 293.1 24.6 245 13-274 1-250 (251)
275 cd06607 STKc_TAO Catalytic dom 100.0 5.5E-38 1.2E-42 302.5 25.4 247 4-271 12-266 (307)
276 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-38 9.2E-43 296.0 24.0 255 7-271 1-263 (267)
277 cd07842 STKc_CDK8_like Catalyt 100.0 8.5E-38 1.9E-42 301.7 26.6 259 8-271 1-312 (316)
278 cd05112 PTKc_Itk Catalytic dom 100.0 7E-38 1.5E-42 293.2 25.3 250 6-273 3-255 (256)
279 PHA03210 serine/threonine kina 100.0 1.2E-38 2.5E-43 326.8 21.7 264 4-279 145-459 (501)
280 cd05042 PTKc_Aatyk Catalytic d 100.0 4.8E-38 1E-42 296.8 24.2 249 13-273 1-267 (269)
281 KOG1164 Casein kinase (serine/ 100.0 1.7E-37 3.7E-42 301.0 28.7 287 5-294 15-315 (322)
282 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 7.1E-39 1.5E-43 300.8 18.3 240 13-273 1-257 (258)
283 cd05633 STKc_GRK3 Catalytic do 100.0 4.8E-38 1E-42 298.9 24.1 240 14-271 1-254 (279)
284 cd06631 STKc_YSK4 Catalytic do 100.0 7.6E-38 1.6E-42 294.6 25.2 252 8-271 1-261 (265)
285 cd07865 STKc_CDK9 Catalytic do 100.0 7.5E-38 1.6E-42 301.1 25.4 259 7-271 12-306 (310)
286 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.9E-38 6.4E-43 297.6 22.0 240 13-273 1-261 (262)
287 smart00219 TyrKc Tyrosine kina 100.0 6.6E-38 1.4E-42 293.0 24.1 248 9-273 1-258 (258)
288 cd06605 PKc_MAPKK Catalytic do 100.0 9.6E-39 2.1E-43 300.4 18.5 248 7-271 1-256 (265)
289 cd05046 PTK_CCK4 Pseudokinase 100.0 4.3E-38 9.3E-43 297.9 23.0 253 6-274 4-274 (275)
290 KOG0604 MAP kinase-activated p 100.0 1.5E-39 3.3E-44 293.8 12.2 255 5-271 59-321 (400)
291 cd06640 STKc_MST4 Catalytic do 100.0 4.8E-38 1E-42 298.3 23.3 254 6-281 3-260 (277)
292 cd08218 STKc_Nek1 Catalytic do 100.0 4.4E-38 9.5E-43 294.6 22.5 246 8-271 1-252 (256)
293 cd07838 STKc_CDK4_6_like Catal 100.0 1.8E-37 3.9E-42 295.0 27.0 252 9-271 1-283 (287)
294 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.9E-38 8.4E-43 295.1 21.9 236 13-273 1-258 (259)
295 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.9E-38 1.7E-42 306.2 25.0 259 5-271 3-299 (342)
296 KOG4279 Serine/threonine prote 100.0 2.6E-39 5.7E-44 319.0 14.3 243 14-271 582-831 (1226)
297 cd07855 STKc_ERK5 Catalytic do 100.0 5.5E-38 1.2E-42 306.2 23.4 265 5-279 3-299 (334)
298 cd06917 STKc_NAK1_like Catalyt 100.0 6.6E-38 1.4E-42 297.0 23.1 252 8-279 2-260 (277)
299 cd06651 STKc_MEKK3 Catalytic d 100.0 8.5E-38 1.8E-42 294.7 23.7 249 7-271 2-260 (266)
300 KOG0607 MAP kinase-interacting 100.0 5.9E-39 1.3E-43 292.1 15.1 262 8-271 78-360 (463)
301 cd06623 PKc_MAPKK_plant_like C 100.0 1.7E-37 3.7E-42 291.4 25.5 249 7-271 1-255 (264)
302 cd07858 STKc_TEY_MAPK_plant Ca 100.0 7.3E-38 1.6E-42 305.8 23.9 255 5-271 3-290 (337)
303 cd06658 STKc_PAK5 Catalytic do 100.0 1.9E-38 4.2E-43 303.7 19.2 247 7-271 22-271 (292)
304 cd08217 STKc_Nek2 Catalytic do 100.0 9.4E-38 2E-42 292.9 23.4 246 8-271 1-261 (265)
305 cd06652 STKc_MEKK2 Catalytic d 100.0 2.2E-37 4.7E-42 291.7 26.0 249 7-271 2-260 (265)
306 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-37 3.6E-42 300.6 25.9 248 5-273 23-278 (317)
307 cd06632 STKc_MEKK1_plant Catal 100.0 1.1E-37 2.4E-42 291.6 23.7 245 8-271 1-254 (258)
308 cd07852 STKc_MAPK15 Catalytic 100.0 8.1E-38 1.8E-42 305.4 23.7 263 2-271 2-294 (337)
309 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-37 3E-42 294.0 24.5 251 8-271 2-268 (272)
310 cd07857 STKc_MPK1 Catalytic do 100.0 2.1E-37 4.7E-42 301.8 26.5 257 8-271 1-291 (332)
311 cd05044 PTKc_c-ros Catalytic d 100.0 5.7E-38 1.2E-42 296.0 21.5 249 13-274 1-268 (269)
312 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.8E-38 1.3E-42 297.6 21.5 239 14-273 2-273 (274)
313 cd07864 STKc_CDK12 Catalytic d 100.0 1.4E-37 3.1E-42 298.4 24.4 259 3-271 3-298 (302)
314 KOG0196 Tyrosine kinase, EPH ( 100.0 2.7E-39 5.9E-44 323.1 12.9 262 4-280 626-895 (996)
315 cd07835 STKc_CDK1_like Catalyt 100.0 1.5E-37 3.2E-42 295.5 24.3 252 9-271 1-279 (283)
316 cd05578 STKc_Yank1 Catalytic d 100.0 4E-38 8.6E-43 295.4 19.7 244 8-269 1-252 (258)
317 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.8E-37 6E-42 294.7 25.8 252 7-271 1-265 (287)
318 cd06624 STKc_ASK Catalytic dom 100.0 2.4E-37 5.1E-42 291.9 25.0 247 10-271 11-264 (268)
319 PHA03390 pk1 serine/threonine- 100.0 1.9E-37 4.2E-42 292.9 24.3 242 7-271 14-261 (267)
320 cd05611 STKc_Rim15_like Cataly 100.0 1.1E-37 2.5E-42 292.6 22.5 242 13-273 2-249 (260)
321 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-37 2.8E-42 295.4 23.1 252 9-271 1-279 (283)
322 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.1E-38 6.6E-43 299.5 18.7 245 7-271 4-252 (277)
323 KOG0671 LAMMER dual specificit 100.0 2.7E-39 5.8E-44 301.2 10.8 266 2-279 84-411 (415)
324 cd08225 STKc_Nek5 Catalytic do 100.0 1.2E-37 2.6E-42 291.5 22.0 247 8-271 1-253 (257)
325 cd08528 STKc_Nek10 Catalytic d 100.0 1.7E-37 3.8E-42 292.8 22.9 250 8-274 1-268 (269)
326 cd06659 STKc_PAK6 Catalytic do 100.0 6.9E-38 1.5E-42 300.6 20.5 247 7-271 21-270 (297)
327 cd05122 PKc_STE Catalytic doma 100.0 3.1E-37 6.7E-42 286.7 24.2 247 8-271 1-250 (253)
328 PTZ00024 cyclin-dependent prot 100.0 2.9E-37 6.2E-42 301.2 25.0 266 1-271 2-312 (335)
329 KOG0199 ACK and related non-re 100.0 1.3E-38 2.9E-43 314.5 15.3 250 6-271 109-367 (1039)
330 KOG0696 Serine/threonine prote 100.0 6.6E-39 1.4E-43 300.3 12.3 245 3-266 345-595 (683)
331 KOG0986 G protein-coupled rece 100.0 8.8E-39 1.9E-43 302.8 13.2 247 4-266 182-435 (591)
332 cd05606 STKc_beta_ARK Catalyti 100.0 3.1E-37 6.7E-42 293.2 23.8 240 14-271 1-254 (278)
333 cd05572 STKc_cGK_PKG Catalytic 100.0 2.4E-37 5.3E-42 290.7 22.8 240 15-271 1-251 (262)
334 cd06626 STKc_MEKK4 Catalytic d 100.0 6.5E-37 1.4E-41 287.6 25.5 252 8-271 1-260 (264)
335 KOG0584 Serine/threonine prote 100.0 9.7E-39 2.1E-43 314.1 13.5 253 7-280 39-302 (632)
336 cd07879 STKc_p38delta_MAPK13 C 100.0 5E-37 1.1E-41 300.5 25.6 250 5-271 13-296 (342)
337 cd06647 STKc_PAK_I Catalytic d 100.0 1.7E-37 3.8E-42 297.2 21.9 254 6-279 18-274 (293)
338 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.7E-37 1.4E-41 299.8 26.2 249 5-271 13-297 (343)
339 cd07840 STKc_CDK9_like Catalyt 100.0 4.1E-37 9E-42 292.4 23.9 253 9-271 1-283 (287)
340 cd06633 STKc_TAO3 Catalytic do 100.0 7.5E-37 1.6E-41 295.6 25.9 244 7-271 21-272 (313)
341 cd07830 STKc_MAK_like Catalyti 100.0 4.2E-37 9E-42 292.3 23.7 252 9-271 1-279 (283)
342 cd06634 STKc_TAO2 Catalytic do 100.0 4.6E-37 9.9E-42 296.4 24.2 246 5-271 13-266 (308)
343 cd07834 STKc_MAPK Catalytic do 100.0 2.5E-37 5.5E-42 300.7 22.6 255 8-271 1-288 (330)
344 cd07877 STKc_p38alpha_MAPK14 C 100.0 9.1E-37 2E-41 299.1 26.6 259 4-279 14-305 (345)
345 cd06614 STKc_PAK Catalytic dom 100.0 4.4E-37 9.5E-42 293.0 23.6 256 6-279 18-275 (286)
346 cd08215 STKc_Nek Catalytic dom 100.0 5.4E-37 1.2E-41 286.4 23.2 246 8-271 1-254 (258)
347 cd05581 STKc_PDK1 Catalytic do 100.0 2.5E-37 5.3E-42 292.8 21.2 253 7-271 1-276 (280)
348 cd05086 PTKc_Aatyk2 Catalytic 100.0 8.5E-37 1.8E-41 288.4 24.7 248 13-273 1-266 (268)
349 cd06648 STKc_PAK_II Catalytic 100.0 6.1E-37 1.3E-41 292.2 24.0 246 8-271 20-268 (285)
350 KOG0586 Serine/threonine prote 100.0 5.6E-38 1.2E-42 308.4 17.0 244 7-271 56-305 (596)
351 cd06641 STKc_MST3 Catalytic do 100.0 7.3E-37 1.6E-41 290.2 24.3 245 7-271 4-252 (277)
352 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.5E-37 1.2E-41 289.9 23.2 251 9-276 1-272 (273)
353 cd06653 STKc_MEKK3_like_1 Cata 100.0 8.5E-37 1.8E-41 287.6 24.3 249 7-271 2-260 (264)
354 cd07851 STKc_p38 Catalytic dom 100.0 3.1E-37 6.8E-42 302.1 22.0 252 5-271 13-297 (343)
355 cd05577 STKc_GRK Catalytic dom 100.0 6.8E-37 1.5E-41 290.4 23.2 238 15-268 1-245 (277)
356 cd06606 STKc_MAPKKK Catalytic 100.0 1.7E-36 3.8E-41 282.8 25.3 249 8-271 1-256 (260)
357 cd05583 STKc_MSK_N N-terminal 100.0 6.4E-37 1.4E-41 292.1 22.7 253 8-275 1-266 (288)
358 cd05613 STKc_MSK1_N N-terminal 100.0 1.9E-36 4E-41 289.2 24.8 243 8-265 1-256 (290)
359 KOG4236 Serine/threonine prote 100.0 1.6E-38 3.6E-43 305.3 10.5 242 13-269 570-816 (888)
360 cd07829 STKc_CDK_like Catalyti 100.0 1.4E-36 3E-41 288.2 23.6 252 9-271 1-278 (282)
361 cd08226 PK_STRAD_beta Pseudoki 100.0 1.2E-36 2.7E-41 296.0 23.7 253 12-271 3-307 (328)
362 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-36 6.1E-41 281.3 25.1 245 8-271 1-250 (254)
363 KOG0666 Cyclin C-dependent kin 100.0 6.4E-38 1.4E-42 284.5 13.4 266 7-279 24-342 (438)
364 cd06657 STKc_PAK4 Catalytic do 100.0 1.9E-36 4E-41 290.0 23.5 251 11-281 24-277 (292)
365 cd08530 STKc_CNK2-like Catalyt 100.0 2.1E-36 4.6E-41 282.7 23.0 244 8-271 1-252 (256)
366 KOG4250 TANK binding protein k 100.0 1.4E-37 3E-42 309.5 15.4 269 6-283 12-317 (732)
367 KOG1094 Discoidin domain recep 100.0 2.4E-37 5.1E-42 300.6 16.6 262 5-276 536-804 (807)
368 KOG1151 Tousled-like protein k 100.0 1.8E-38 4E-43 299.6 8.1 265 3-270 459-739 (775)
369 KOG4645 MAPKKK (MAP kinase kin 100.0 8.4E-39 1.8E-43 334.5 6.4 251 6-271 1234-1493(1509)
370 cd05579 STKc_MAST_like Catalyt 100.0 1.4E-36 3E-41 285.0 20.8 249 15-274 1-256 (265)
371 cd08222 STKc_Nek11 Catalytic d 100.0 9.4E-37 2E-41 286.4 19.6 245 8-271 1-256 (260)
372 KOG0614 cGMP-dependent protein 100.0 8.4E-39 1.8E-43 306.3 5.4 265 7-295 420-690 (732)
373 cd05610 STKc_MASTL Catalytic d 100.0 1E-35 2.2E-40 314.4 27.1 143 7-154 4-152 (669)
374 KOG0603 Ribosomal protein S6 k 100.0 4.5E-37 9.8E-42 303.5 15.7 242 5-271 320-562 (612)
375 KOG0587 Traf2- and Nck-interac 100.0 2.5E-36 5.5E-41 305.9 20.8 251 6-271 18-281 (953)
376 KOG0662 Cyclin-dependent kinas 100.0 1.2E-36 2.6E-41 256.6 15.0 254 7-271 2-282 (292)
377 KOG1006 Mitogen-activated prot 100.0 2.6E-38 5.5E-43 281.6 5.1 251 8-271 65-326 (361)
378 KOG2052 Activin A type IB rece 100.0 3E-36 6.4E-41 285.4 19.0 266 1-278 205-505 (513)
379 cd08216 PK_STRAD Pseudokinase 100.0 9.3E-36 2E-40 287.6 22.3 259 10-278 5-299 (314)
380 KOG0669 Cyclin T-dependent kin 100.0 6.6E-38 1.4E-42 277.0 4.5 261 5-271 15-314 (376)
381 KOG1035 eIF-2alpha kinase GCN2 100.0 2.6E-36 5.5E-41 314.5 15.7 257 6-271 478-870 (1351)
382 cd05123 STKc_AGC Catalytic dom 100.0 3.9E-35 8.5E-40 273.3 22.2 234 15-268 1-240 (250)
383 KOG1290 Serine/threonine prote 100.0 4E-35 8.6E-40 280.3 21.9 137 1-137 71-222 (590)
384 KOG0695 Serine/threonine prote 100.0 3.5E-36 7.5E-41 275.6 13.7 269 6-294 249-528 (593)
385 KOG0200 Fibroblast/platelet-de 100.0 1.1E-34 2.4E-39 302.4 24.5 258 7-279 296-582 (609)
386 PLN03225 Serine/threonine-prot 100.0 7.6E-35 1.7E-39 300.9 20.7 259 6-281 131-457 (566)
387 KOG0670 U4/U6-associated splic 100.0 5.1E-36 1.1E-40 287.9 10.9 208 1-219 426-641 (752)
388 cd05576 STKc_RPK118_like Catal 100.0 8.1E-35 1.8E-39 270.0 18.6 220 18-267 4-224 (237)
389 KOG1025 Epidermal growth facto 100.0 4E-34 8.6E-39 287.2 22.7 258 8-282 697-963 (1177)
390 PLN00113 leucine-rich repeat r 100.0 6.6E-34 1.4E-38 314.3 22.6 248 8-278 691-953 (968)
391 KOG3653 Transforming growth fa 100.0 3E-34 6.6E-39 273.7 16.4 258 7-277 210-504 (534)
392 KOG0608 Warts/lats-like serine 100.0 2.2E-34 4.7E-39 282.0 14.8 269 6-294 628-940 (1034)
393 smart00220 S_TKc Serine/Threon 100.0 3.2E-32 6.9E-37 251.1 22.4 236 19-271 1-240 (244)
394 KOG1024 Receptor-like protein 100.0 3.8E-33 8.3E-38 260.3 16.1 261 5-280 282-559 (563)
395 KOG0984 Mitogen-activated prot 100.0 3.7E-33 8.1E-38 240.3 11.3 211 7-230 46-267 (282)
396 KOG1027 Serine/threonine prote 100.0 1.9E-33 4.1E-38 283.9 10.2 247 11-271 513-766 (903)
397 KOG1345 Serine/threonine kinas 100.0 2.8E-33 6.1E-38 250.1 9.6 257 5-276 22-288 (378)
398 KOG0664 Nemo-like MAPK-related 100.0 3.2E-34 7E-39 256.3 2.1 253 9-271 55-342 (449)
399 PLN03224 probable serine/threo 100.0 4E-31 8.7E-36 267.3 23.7 257 3-271 141-499 (507)
400 KOG0668 Casein kinase II, alph 100.0 1.4E-32 3E-37 240.2 10.2 251 6-271 37-321 (338)
401 cd00180 PKc Catalytic domain o 100.0 8.3E-30 1.8E-34 229.0 22.4 208 15-272 1-214 (215)
402 KOG1152 Signal transduction se 100.0 1.8E-31 3.8E-36 259.7 10.8 195 8-215 562-771 (772)
403 KOG0665 Jun-N-terminal kinase 100.0 4.5E-31 9.7E-36 241.2 11.0 252 5-271 15-309 (369)
404 KOG1167 Serine/threonine prote 100.0 5E-31 1.1E-35 249.1 11.2 261 5-271 34-380 (418)
405 KOG0576 Mitogen-activated prot 100.0 5.8E-32 1.3E-36 266.9 4.7 250 6-270 14-269 (829)
406 smart00221 STYKc Protein kinas 100.0 4.9E-28 1.1E-32 221.1 21.6 197 9-215 1-202 (225)
407 smart00750 KIND kinase non-cat 100.0 1.8E-28 3.9E-33 216.7 17.3 167 87-278 1-171 (176)
408 PLN00181 protein SPA1-RELATED; 100.0 5.8E-29 1.3E-33 268.7 11.1 188 75-271 52-264 (793)
409 PRK09188 serine/threonine prot 99.9 5.2E-26 1.1E-30 221.1 15.4 180 3-197 14-210 (365)
410 COG0515 SPS1 Serine/threonine 99.9 6.2E-24 1.3E-28 202.9 25.4 257 9-272 2-275 (384)
411 KOG0590 Checkpoint kinase and 99.9 3.3E-25 7.1E-30 229.0 6.7 254 10-271 321-584 (601)
412 PF14531 Kinase-like: Kinase-l 99.9 3.6E-24 7.8E-29 200.1 12.7 231 8-263 13-288 (288)
413 PRK10359 lipopolysaccharide co 99.9 2E-23 4.4E-28 189.5 10.9 171 2-207 26-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.9 5.5E-23 1.2E-27 183.9 12.8 136 12-156 2-167 (190)
415 KOG1166 Mitotic checkpoint ser 99.9 7.8E-22 1.7E-26 208.3 17.7 255 4-280 695-957 (974)
416 KOG1240 Protein kinase contain 99.9 4.3E-23 9.3E-28 214.2 7.3 248 8-272 24-291 (1431)
417 cd05145 RIO1_like RIO kinase f 99.9 9.8E-22 2.1E-26 176.1 15.1 138 11-157 1-168 (190)
418 KOG0603 Ribosomal protein S6 k 99.9 1.5E-23 3.3E-28 207.8 3.2 224 14-266 1-232 (612)
419 KOG0606 Microtubule-associated 99.9 1.7E-22 3.7E-27 209.6 9.8 215 6-264 82-304 (1205)
420 PRK12274 serine/threonine prot 99.9 8.1E-22 1.8E-26 175.5 12.8 191 9-216 4-210 (218)
421 KOG4158 BRPK/PTEN-induced prot 99.9 2E-21 4.4E-26 182.6 13.3 189 76-275 316-513 (598)
422 KOG0195 Integrin-linked kinase 99.9 8E-22 1.7E-26 176.9 7.4 243 8-276 191-446 (448)
423 smart00090 RIO RIO-like kinase 99.8 5E-20 1.1E-24 170.4 12.1 140 8-156 29-198 (237)
424 PRK14879 serine/threonine prot 99.8 5.1E-18 1.1E-22 154.4 19.2 131 13-155 2-143 (211)
425 KOG1023 Natriuretic peptide re 99.8 3.3E-19 7.2E-24 176.9 12.0 213 58-280 3-228 (484)
426 PRK10345 hypothetical protein; 99.8 1.6E-18 3.5E-23 156.8 15.2 136 11-153 6-156 (210)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 5.1E-18 1.1E-22 153.0 13.8 127 14-155 1-138 (199)
428 KOG1033 eIF-2alpha kinase PEK/ 99.8 3.3E-19 7.2E-24 174.0 5.8 174 76-266 329-506 (516)
429 cd05144 RIO2_C RIO kinase fami 99.8 8.4E-18 1.8E-22 151.6 13.3 136 8-158 16-177 (198)
430 PRK09605 bifunctional UGMP fam 99.7 3.4E-17 7.3E-22 169.5 15.5 133 7-155 333-476 (535)
431 cd05119 RIO RIO kinase family, 99.7 1.6E-16 3.5E-21 141.6 13.0 136 11-158 1-166 (187)
432 cd05120 APH_ChoK_like Aminogly 99.7 1E-15 2.2E-20 130.4 12.7 132 11-155 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.6 4.2E-15 9.1E-20 137.8 15.6 132 13-155 37-191 (239)
434 KOG0590 Checkpoint kinase and 99.6 1.3E-17 2.8E-22 172.7 -3.2 255 6-271 19-285 (601)
435 KOG0601 Cyclin-dependent kinas 99.6 2.1E-15 4.5E-20 150.1 5.9 254 5-271 112-378 (524)
436 TIGR01982 UbiB 2-polyprenylphe 99.6 4.2E-13 9.1E-18 135.0 21.1 138 13-157 123-308 (437)
437 cd05146 RIO3_euk RIO kinase fa 99.5 3.4E-13 7.3E-18 120.1 13.2 136 12-157 2-175 (197)
438 cd05151 ChoK Choline Kinase (C 99.5 2.3E-13 4.9E-18 119.2 11.6 126 12-154 3-135 (170)
439 PRK04750 ubiB putative ubiquin 99.5 4.3E-12 9.2E-17 129.4 22.3 139 8-157 121-315 (537)
440 KOG3087 Serine/threonine prote 99.4 1.4E-12 3.1E-17 112.0 11.7 143 11-156 11-166 (229)
441 KOG0606 Microtubule-associated 99.4 1.1E-13 2.4E-18 144.8 5.6 274 6-299 803-1109(1205)
442 COG3642 Mn2+-dependent serine/ 99.4 6.8E-12 1.5E-16 108.3 13.1 128 13-155 2-140 (204)
443 KOG0601 Cyclin-dependent kinas 99.3 2E-12 4.4E-17 129.0 5.2 241 6-271 264-513 (524)
444 COG4248 Uncharacterized protei 99.2 2.6E-10 5.6E-15 109.4 15.3 258 6-278 10-302 (637)
445 cd05154 ACAD10_11_like Acyl-Co 99.2 2E-10 4.4E-15 104.8 11.8 138 13-154 4-205 (223)
446 KOG1243 Protein kinase [Genera 99.2 8.9E-10 1.9E-14 111.5 17.0 182 9-210 15-200 (690)
447 PRK15123 lipopolysaccharide co 99.1 2.9E-09 6.4E-14 100.0 17.9 132 21-154 36-193 (268)
448 KOG1266 Protein kinase [Signal 99.1 1.1E-10 2.5E-15 108.3 7.6 179 75-270 144-329 (458)
449 PF01163 RIO1: RIO1 family; I 99.1 3.7E-10 8E-15 100.2 9.4 125 22-157 1-157 (188)
450 KOG2137 Protein kinase [Signal 99.0 2.5E-10 5.4E-15 115.8 5.3 155 110-271 106-264 (700)
451 COG2112 Predicted Ser/Thr prot 98.8 3.6E-08 7.9E-13 84.8 10.7 128 10-155 25-155 (201)
452 PRK09902 hypothetical protein; 98.8 1.7E-07 3.8E-12 83.9 15.5 137 16-155 27-179 (216)
453 PF06293 Kdo: Lipopolysacchari 98.8 1.2E-07 2.7E-12 85.8 14.7 109 46-155 55-170 (206)
454 PF06176 WaaY: Lipopolysacchar 98.8 7.9E-08 1.7E-12 86.4 11.7 138 2-154 26-182 (229)
455 KOG3741 Poly(A) ribonuclease s 98.8 8.2E-07 1.8E-11 87.8 19.5 210 20-271 289-520 (655)
456 COG0478 RIO-like serine/threon 98.7 1.1E-07 2.3E-12 87.3 11.0 132 9-154 93-250 (304)
457 TIGR02172 Fb_sc_TIGR02172 Fibr 98.7 4.2E-07 9.1E-12 83.5 13.8 71 13-87 7-78 (226)
458 COG0661 AarF Predicted unusual 98.6 3.1E-07 6.7E-12 93.5 11.5 139 13-157 131-316 (517)
459 COG1718 RIO1 Serine/threonine 98.5 1.5E-06 3.1E-11 79.2 11.6 134 13-157 54-217 (268)
460 PF01636 APH: Phosphotransfera 98.5 3E-06 6.6E-11 77.5 13.2 139 12-154 2-196 (239)
461 cd05150 APH Aminoglycoside 3'- 98.5 2.9E-06 6.3E-11 78.9 13.2 75 14-91 5-81 (244)
462 KOG1235 Predicted unusual prot 98.3 2.8E-06 6.1E-11 86.3 10.6 141 13-158 167-357 (538)
463 KOG0576 Mitogen-activated prot 98.2 3.7E-07 8E-12 92.3 -0.3 184 9-214 244-431 (829)
464 PF10707 YrbL-PhoP_reg: PhoP r 98.1 0.0001 2.2E-09 66.0 14.2 129 12-149 6-165 (199)
465 cd05155 APH_ChoK_like_1 Unchar 98.1 2.2E-05 4.9E-10 72.5 10.1 73 12-89 2-81 (235)
466 PLN02876 acyl-CoA dehydrogenas 98.0 7.7E-05 1.7E-09 81.5 14.1 77 11-87 42-128 (822)
467 PF13095 FTA2: Kinetochore Sim 98.0 0.00013 2.9E-09 65.0 12.1 124 7-153 37-206 (207)
468 cd05157 ETNK_euk Ethanolamine 97.9 0.00029 6.2E-09 64.9 13.8 71 12-86 3-75 (235)
469 PRK09550 mtnK methylthioribose 97.9 0.0038 8.3E-08 62.0 22.3 73 12-86 31-114 (401)
470 TIGR01767 MTRK 5-methylthiorib 97.9 0.0016 3.4E-08 63.5 18.4 70 14-85 2-82 (370)
471 TIGR02721 ycfN_thiK thiamine k 97.8 0.00018 3.9E-09 67.4 10.2 131 14-154 3-174 (256)
472 PRK05231 homoserine kinase; Pr 97.7 0.0014 3E-08 63.4 15.1 73 12-87 27-106 (319)
473 TIGR00938 thrB_alt homoserine 97.6 0.00078 1.7E-08 64.9 12.7 138 12-154 27-216 (307)
474 KOG2270 Serine/threonine prote 97.6 0.0004 8.6E-09 66.8 10.1 138 10-155 147-313 (520)
475 cd05156 ChoK_euk Choline Kinas 97.6 0.00055 1.2E-08 65.7 10.7 70 12-85 3-79 (302)
476 PF12260 PIP49_C: Protein-kina 97.5 0.00046 1E-08 61.4 8.1 100 50-156 7-112 (188)
477 cd05153 HomoserineK_II Homoser 97.5 0.0016 3.5E-08 62.2 12.3 137 12-154 19-204 (296)
478 KOG1035 eIF-2alpha kinase GCN2 97.4 0.00093 2E-08 72.6 10.7 197 49-272 229-434 (1351)
479 cd05152 MPH2' Macrolide 2'-Pho 97.3 0.0011 2.4E-08 62.8 9.5 49 13-62 14-65 (276)
480 KOG2268 Serine/threonine prote 97.3 0.00017 3.7E-09 68.2 3.7 133 8-155 93-251 (465)
481 PLN02236 choline kinase 97.2 0.0089 1.9E-07 58.6 14.5 137 12-154 41-230 (344)
482 KOG1093 Predicted protein kina 97.2 0.0018 3.8E-08 65.0 8.8 166 44-271 24-193 (725)
483 KOG1826 Ras GTPase activating 97.1 6.9E-05 1.5E-09 82.9 -1.9 131 74-214 1302-1441(2724)
484 PLN02421 phosphotransferase, a 97.1 0.0074 1.6E-07 58.8 12.4 73 8-85 16-92 (330)
485 PRK10593 hypothetical protein; 97.1 0.004 8.7E-08 59.7 10.2 107 8-122 15-127 (297)
486 PRK12396 5-methylribose kinase 97.0 0.0071 1.5E-07 59.7 11.0 72 12-85 34-115 (409)
487 PF03881 Fructosamin_kin: Fruc 96.7 0.024 5.2E-07 54.0 12.1 73 10-85 20-94 (288)
488 TIGR02906 spore_CotS spore coa 96.4 0.089 1.9E-06 50.5 14.3 29 122-154 187-215 (313)
489 PLN02756 S-methyl-5-thioribose 96.4 0.071 1.5E-06 53.0 13.5 73 11-87 36-119 (418)
490 PRK11768 serine/threonine prot 96.3 0.11 2.4E-06 50.5 14.3 68 18-87 36-111 (325)
491 COG3173 Predicted aminoglycosi 96.2 0.044 9.6E-07 52.7 10.8 139 10-155 28-228 (321)
492 PTZ00384 choline kinase; Provi 96.2 0.097 2.1E-06 52.0 13.2 71 12-86 55-132 (383)
493 PF01633 Choline_kinase: Choli 96.0 0.018 4E-07 52.1 6.8 50 32-85 2-52 (211)
494 COG5072 ALK1 Serine/threonine 95.9 0.044 9.6E-07 53.1 8.7 73 74-155 297-370 (488)
495 COG2334 Putative homoserine ki 95.9 0.06 1.3E-06 52.2 9.9 131 19-154 37-227 (331)
496 PRK06148 hypothetical protein; 95.3 0.3 6.5E-06 54.8 14.3 47 13-61 31-77 (1013)
497 TIGR02904 spore_ysxE spore coa 95.2 0.36 7.9E-06 46.4 12.8 29 123-154 197-225 (309)
498 KOG1236 Predicted unusual prot 94.9 0.078 1.7E-06 52.2 7.1 61 76-138 318-380 (565)
499 COG0510 ycfN Thiamine kinase a 93.8 0.58 1.3E-05 44.1 10.4 44 108-154 137-182 (269)
500 PTZ00296 choline kinase; Provi 93.8 1.1 2.5E-05 45.3 13.0 72 11-86 109-189 (442)
No 1
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-56 Score=388.01 Aligned_cols=293 Identities=69% Similarity=1.195 Sum_probs=286.8
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|++++|+++++||+|+||.+|+|.....|+.||||+......++++..|.+++..|++...+|.+..|+.+.....+||
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
+++|.+|++++..|.+.|+.++++.++.||+.-++|+|.+++|||||||+|+|++.+....++.|+|||+|+.+.+..+.
T Consensus 91 dLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~ 170 (341)
T KOG1163|consen 91 DLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTR 170 (341)
T ss_pred eccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999999999999
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.|+||++...+.||.+|++-..+.+.+.+++.|+-|+|++|.++..|.+||++..+.+..+++++|.+.+...+++.+|+
T Consensus 171 ~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~ 250 (341)
T KOG1163|consen 171 QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCK 250 (341)
T ss_pred ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceeccc
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY 295 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~~~ 295 (423)
++|.+|.-++..|-..-.++-|++..|.++|+-+|...++..|+.|||..++.
T Consensus 251 G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~~d~iyDW~~lkq 303 (341)
T KOG1163|consen 251 GFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQ 303 (341)
T ss_pred CCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhccccCCeEeeHHHHHH
Confidence 99999999999999999999999999999999999999999999999998863
No 2
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-53 Score=388.14 Aligned_cols=291 Identities=58% Similarity=1.011 Sum_probs=282.7
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
|+|-.|+++++||+|+||+++.|+..-++++||||.........++..|.+.++.|.+.+.||.+++|+.++.+..||||
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 78899999999999999999999999999999999999989999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc--CCCCeEEEeeccceeeccCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG--RKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~--~~~~~vkL~DFGla~~~~~~~~ 161 (423)
++|.+|+|++..|.++|+.++++.++.||+.-++|+|++.+|+|||||+|+||+.. .+...|.|+|||+|+.+.++.+
T Consensus 105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999753 2456899999999999999999
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
+.|+||++.+.+.||.+||+...+.|.+.+++.|+-|||-++++++.|.+||+++++.+..++|++|-+.+...+++.+|
T Consensus 185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc 264 (449)
T KOG1165|consen 185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLC 264 (449)
T ss_pred cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceecc
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILK 294 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~~ 294 (423)
.++|.+|...+...-.++..+-|+++.+..+|.+++.+.|..+|..|||..+.
T Consensus 265 ~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 265 EGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred hcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 99999999999999999999999999999999999999999999999998765
No 3
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-50 Score=386.15 Aligned_cols=266 Identities=25% Similarity=0.362 Sum_probs=229.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-.+|.+++.||+|+|++|++|+.+.+++.|||||+.+. ...+-+.+|-.+|.+|.+++.|..+++.+.+...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 36899999999999999999999999999999987643 3444578899999999999999999999999999999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+||+ +|+|.+++.+. +.|++..+..++.||+.||+|||++|||||||||+|||+ |.++++||+|||.|+.+...
T Consensus 152 vLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPS 227 (604)
T ss_pred EEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChh
Confidence 99999 99999999874 679999999999999999999999999999999999999 69999999999999988765
Q ss_pred CCCCcc----cccCC--CCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 160 TTNRHI----PYREN--KNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 160 ~~~~~~----~~~~~--~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
.....- .+... ..++||..|.+||++.....+..+|||+||||||.|+.|.+||.+.+. ...+++|+.-.+
T Consensus 228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne---yliFqkI~~l~y 304 (604)
T KOG0592|consen 228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE---YLIFQKIQALDY 304 (604)
T ss_pred hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH---HHHHHHHHHhcc
Confidence 433111 11112 569999999999999999999999999999999999999999987544 456666776666
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
.+| ..+|+.+.+||.++|..||.+|++.++|.+ +.|....||+-+
T Consensus 305 ~fp-----~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~----------HpFF~~Vdw~nl 349 (604)
T KOG0592|consen 305 EFP-----EGFPEDARDLIKKLLVRDPSDRLTSQQIKA----------HPFFEGVDWENL 349 (604)
T ss_pred cCC-----CCCCHHHHHHHHHHHccCccccccHHHHhh----------CcccccCChhhh
Confidence 666 556899999999999999999999988855 455556677654
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.5e-51 Score=380.79 Aligned_cols=255 Identities=26% Similarity=0.338 Sum_probs=217.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---------CchhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---------KHPQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
.+...|.+.+.||+|+||.|-+|..+.+++.||||++++.. ....+.+|+++|++|+| |+|..+..++..
T Consensus 169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~H-P~IV~~~d~f~~ 247 (475)
T KOG0615|consen 169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSH-PNIVRIKDFFEV 247 (475)
T ss_pred hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCC-CCEEEEeeeeec
Confidence 46788999999999999999999999999999999987542 12235799999999987 667788888888
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
.+..||||||+ ||.|.+.+.. ++.+.+.....++.||+.||.|||++||+||||||+|||++.++++..+||+|||+|
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv~-nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVVA-NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred CCceEEEEEEecCccHHHHHHh-ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 89999999999 9999999875 567899999999999999999999999999999999999986666789999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
+...... ...++|||+.|.|||++.+.. +..++|+|||||+||-+++|.+||.+.... ....+.|..
T Consensus 327 K~~g~~s--------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~eQI~~ 396 (475)
T KOG0615|consen 327 KVSGEGS--------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLKEQILK 396 (475)
T ss_pred hccccce--------ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHHHHHhc
Confidence 9876433 234889999999999998665 345889999999999999999999875432 224555666
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+++..- +..+.+++++..+||.+||..||++||++++.++
T Consensus 397 G~y~f~-p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAFG-PLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred Cccccc-ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 666554 3455778999999999999999999999998866
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-50 Score=373.15 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=214.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC---CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-eeEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG---TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE-DNVLV 81 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~---~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~-~~~lv 81 (423)
..+.+.++.||+|..|+||+|+++.+++.+|+|++... ....++.+|+++++..++ ++|+.++..+.... ...|+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~s-pyIV~~ygaF~~~~~~isI~ 156 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQS-PYIVGFYGAFYSNGEEISIC 156 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCC-CCeeeEeEEEEeCCceEEee
Confidence 34778889999999999999999999999999988433 235578999999999954 67777776666666 59999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||| +|+|.+++... +++++...-.|+.+|++||.|||. ++||||||||+|||+ +..|.|||||||.++.+...
T Consensus 157 mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 157 MEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGILVNS 232 (364)
T ss_pred hhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHhhhh
Confidence 9999 99999999864 679999999999999999999995 999999999999999 58999999999999988765
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCc--hhhhhHHHHHHHHhhccCCch
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL--KAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~--~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.. .+++||..|||||.+.+..|+.++||||||++++|+++|++||... ......+.+..|+....+
T Consensus 233 ~a---------~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP--- 300 (364)
T KOG0581|consen 233 IA---------NTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP--- 300 (364)
T ss_pred hc---------ccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC---
Confidence 32 3789999999999999999999999999999999999999999863 223455666666654332
Q ss_pred HHhhc-cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 238 EVLCK-SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 238 ~~~~~-~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.++. .++++|++||..||++||.+||++.+|++ +.++.+
T Consensus 301 -~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~--Hpfi~~ 340 (364)
T KOG0581|consen 301 -RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ--HPFIKK 340 (364)
T ss_pred -CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc--CHHHhh
Confidence 2223 36999999999999999999999999977 555554
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-49 Score=388.26 Aligned_cols=251 Identities=28% Similarity=0.407 Sum_probs=224.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecC-----CCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS-----GTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~-----~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.+|+.++.||+|||+.||.+++..+|+.||+|++.+ ....+.+.+|+++.+.|+| ++|+.++.|+++.++.|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~H-pnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKH-PNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCC-CcEEeeeeEeecCCceEEE
Confidence 579999999999999999999999999999998765 3445568999999999987 6788888999999999999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
+|+| .++|..+++ .++.+++.+++.+++||+.||.|||+++|||||||..|+|+ +++..|||+|||+|..+..+.
T Consensus 97 LELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 97 LELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCcc
Confidence 9999 889999888 57889999999999999999999999999999999999999 588899999999999987654
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. ...+.+|||.|.|||++....++..+||||+|||||-|+.|++||... +..+.|.+|....+..|.
T Consensus 173 E-------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk---~vkety~~Ik~~~Y~~P~--- 239 (592)
T KOG0575|consen 173 E-------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK---TVKETYNKIKLNEYSMPS--- 239 (592)
T ss_pred c-------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc---hHHHHHHHHHhcCccccc---
Confidence 3 234889999999999999999999999999999999999999999863 455778888888888775
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.++.+.++||.++|+.||.+||++++|+. +++|++
T Consensus 240 --~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~--h~Ff~~ 274 (592)
T KOG0575|consen 240 --HLSAEAKDLIRKLLRPNPSERPSLDEVLD--HPFFKS 274 (592)
T ss_pred --ccCHHHHHHHHHHhcCCcccCCCHHHHhc--CHhhhC
Confidence 45889999999999999999999999965 677743
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-49 Score=369.85 Aligned_cols=260 Identities=25% Similarity=0.343 Sum_probs=220.8
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
-...|++++.||+|+||+||.++.+++++.+|+|++++.. .......|..+|..++| +.++.+.+-+++.+..|
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~h-PFiv~l~ysFQt~~kLy 101 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKH-PFIVKLIYSFQTEEKLY 101 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCC-CcEeeeEEecccCCeEE
Confidence 3578999999999999999999999999999999887653 34457899999999765 67777888888999999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+|+||+ ||.|...+.. .+.|++..+..++..|+.||.|||++|||||||||+|||+ |.+|+++|+|||+|+....
T Consensus 102 lVld~~~GGeLf~hL~~-eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 102 LVLDYLNGGELFYHLQR-EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEEeccCCccHHHHHHh-cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhccc
Confidence 999999 8899988875 6779999999999999999999999999999999999999 6999999999999996655
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
... ....++||+.|||||++.+..|+..+|+||||+++|||++|..||.+.+ ..+.+++|...+...+.
T Consensus 178 ~~~-------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~---~~~~~~~I~~~k~~~~p- 246 (357)
T KOG0598|consen 178 DGD-------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED---VKKMYDKILKGKLPLPP- 246 (357)
T ss_pred CCC-------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc---HHHHHHHHhcCcCCCCC-
Confidence 433 2336899999999999999999999999999999999999999998754 34666777776644332
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCC----hHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPD----YGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt----~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
..++.+.++++..+|..||++|.. +.+| ..+.|....||+.+
T Consensus 247 ---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~i----------k~HpfF~~inW~~l 292 (357)
T KOG0598|consen 247 ---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEI----------KRHPFFKGINWEKL 292 (357)
T ss_pred ---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHh----------hcCcccccCCHHHH
Confidence 224789999999999999999963 3433 44667777788754
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-47 Score=360.42 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=207.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
-++|.+.+.||.|+||+||+|++++++..||||.+.... ..+.+..|+++|+.++| ++|..+..+....+..|+|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H-~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKH-PNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCC-cceeeEEEEEecCCeEEEE
Confidence 378999999999999999999999999999999877664 23347899999999996 6777888888899999999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC---CeEEEeeccceeecc
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA---NQVYIIDFGLAKKYR 157 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~---~~vkL~DFGla~~~~ 157 (423)
|||| ||+|.+++.. .+.+++.++..++.||+.||++||+++||||||||+|||++..... ..+||+|||+|+.+.
T Consensus 88 MEyC~gGDLs~yi~~-~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRR-RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEeCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 9999 8999999986 4579999999999999999999999999999999999999764222 689999999999887
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
... ...+.+|++.|||||++....|+.|+|+||+|+|+|+|++|+.||...+.. +.+..+.......+.
T Consensus 167 ~~~--------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~---eL~~~~~k~~~~~~~ 235 (429)
T KOG0595|consen 167 PGS--------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK---ELLLYIKKGNEIVPV 235 (429)
T ss_pred chh--------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH---HHHHHHhccccccCc
Confidence 543 234789999999999999999999999999999999999999999865443 333333333222221
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 269 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 269 (423)
+....+....+++...+..+|.+|-++.+.
T Consensus 236 --~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~ 265 (429)
T KOG0595|consen 236 --LPAELSNPLRELLISLLQRNPKDRISFEDF 265 (429)
T ss_pred --hhhhccCchhhhhhHHHhcCccccCchHHh
Confidence 222335667799999999999999887654
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.9e-48 Score=349.95 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=211.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCch----hHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----QLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~----~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|+.+.++|+|+||+||+|++++||+.||||.+....+.+ -.++|+++|++|.|.+ ++.+...+......++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~N-LVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHEN-LVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccch-HHHHHHHHHhcceeEEEe
Confidence 57999999999999999999999999999999877655533 3689999999999855 444544555677899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|||..++.+.+......++...+..++.|++.|+.|+|++++|||||||+|||++ ..+.+||||||+|+.+..+...
T Consensus 81 E~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pgd~ 157 (396)
T KOG0593|consen 81 EYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPGDN 157 (396)
T ss_pred eecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe---cCCcEEeccchhhHhhcCCcch
Confidence 9999999999988778899999999999999999999999999999999999996 8999999999999998764432
Q ss_pred CcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST------ 235 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~------ 235 (423)
...++.|..|+|||.+.| ..|+..+||||+||++.||++|.+.|.+.++.+....+.+.++.-.+.
T Consensus 158 -------YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 158 -------YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred -------hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhc
Confidence 236789999999999998 569999999999999999999999999977665555444433322111
Q ss_pred -----------------chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 -----------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 -----------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
|.+.-...++.-+.+|+..||..||++|++.++++.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 122233344567899999999999999999999965
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-49 Score=351.73 Aligned_cols=249 Identities=24% Similarity=0.297 Sum_probs=207.0
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEE-EeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIK-WYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~-~~~~~~~~~~lv 81 (423)
..|+|+++||.|+||+||+|.+..++..||.|-+.-+. ..+....|+.+|++|+|++.+..+. .+..+....+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45999999999999999999999999999999766443 3345889999999999866555554 344455558999
Q ss_pred Eecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh--CC--ccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 82 LDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHS--RG--FLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs--~g--iiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
|||| .|+|..+++. .++.+++.++|.++.|++.||.++|+ .. |+||||||.||++ +.+|.|||+|||++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGDFGLG 175 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeeccchhH
Confidence 9999 9999999863 34569999999999999999999999 45 9999999999999 48999999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
+.+....+. ..+++|||.||+||.+.+.+|+++|||||+||++|||+.-..||.+. .-.+.-.+|....+
T Consensus 176 r~l~s~~tf-------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~---n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 176 RFLSSKTTF-------AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD---NLLSLCKKIEQGDY 245 (375)
T ss_pred hHhcchhHH-------HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc---cHHHHHHHHHcCCC
Confidence 998876653 34789999999999999999999999999999999999999999985 33455556666655
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+.-.. ..++.++..||..|+..||+.||+.-.++.
T Consensus 246 ~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 246 PPLPD---EHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCcH---HHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 42222 334889999999999999999998533333
No 11
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-47 Score=366.06 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=210.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCce-EEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-eeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEI-VAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE-DNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~-vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~-~~~ 79 (423)
.....+.+.||.|+||+||+|.+. |.. ||||++..... ...+.+|+.+|.+|+|++++. +........ ..+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~-f~G~~~~~~~~~~ 116 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQ-FYGACTSPPGSLC 116 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeee-EEEEEcCCCCceE
Confidence 445667788999999999999995 445 99998876432 346999999999999855444 444444444 689
Q ss_pred EEEecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCCCceEEeccCCCC-eEEEeeccceee
Q 014544 80 LVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRG-FLHRDIKPDNFLMGLGRKAN-QVYIIDFGLAKK 155 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LHs~g-iiHrDLKp~NILl~~~~~~~-~vkL~DFGla~~ 155 (423)
|||||+ +|+|.+++.. ..+.+++..++.|+.||+.||.|||+++ ||||||||+|||+ +... ++||+|||+++.
T Consensus 117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSRE 193 (362)
T ss_pred EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCcccee
Confidence 999999 9999999987 3678999999999999999999999999 9999999999999 4675 999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhc--CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHL--GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
...... ......||+.|||||++. ...|+.|+||||||++||||+||+.||.+.... +....+.....
T Consensus 194 ~~~~~~-------~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~---~~~~~v~~~~~ 263 (362)
T KOG0192|consen 194 KVISKT-------SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV---QVASAVVVGGL 263 (362)
T ss_pred eccccc-------cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhcCC
Confidence 664321 122468999999999999 558999999999999999999999999987652 33334444444
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
..+++.. +|+.+..+|..||..||+.||++.+|+..|+.+.....
T Consensus 264 Rp~~p~~---~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 264 RPPIPKE---CPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred CCCCCcc---CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 4443332 59999999999999999999999999999999887554
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-46 Score=356.44 Aligned_cols=267 Identities=25% Similarity=0.323 Sum_probs=221.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCCCCeEEEeeee-CCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSGIPNIKWYGVD-GEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~----~~~E~~~l~~l~~~~~i~~i~~~~~~-~~~~~l 80 (423)
...|+.+++||+|.||.||+|++..+|+.||+|.+..+..... ..+|+.||++|.|++.+......... ...+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3568899999999999999999999999999998876654443 68999999999986655444443333 578999
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|+|||..+|.-++....-+|++.++..++.||+.||+|||++||+|||||.+|||| |..|.+||+|||+|+.+....
T Consensus 196 VFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeeccCCC
Confidence 99999999999998666689999999999999999999999999999999999999 689999999999999887655
Q ss_pred CCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc---
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP--- 236 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~--- 236 (423)
... ....+-|..|.|||++.|.. |+.+.|+||.||||.||++|++.|++-+..+..+++.++|.......
T Consensus 273 ~~~------~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~ 346 (560)
T KOG0600|consen 273 SAP------YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPV 346 (560)
T ss_pred Ccc------cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccc
Confidence 332 23667899999999999876 99999999999999999999999999877777777766665321111
Q ss_pred ------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCC
Q 014544 237 ------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYD 283 (423)
Q Consensus 237 ------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 283 (423)
+.+..+.+|....+|+..+|..||++|.|+.+.+. .++|...-+.
T Consensus 347 ~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~--seyF~t~p~~ 409 (560)
T KOG0600|consen 347 SKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ--SEYFTTEPLP 409 (560)
T ss_pred ccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc--CcccccCCCC
Confidence 22234567889999999999999999999998765 5666444433
No 13
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-47 Score=364.46 Aligned_cols=257 Identities=25% Similarity=0.331 Sum_probs=214.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chh--HHHHHHHHHHHcCCCCCCeEEEeeeeCC-eeE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQ--LLYEAKVYKILQGGSGIPNIKWYGVDGE-DNV 79 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~--~~~E~~~l~~l~~~~~i~~i~~~~~~~~-~~~ 79 (423)
++-.+|.++++||.|+||.||+|+.+.++..||||.++..-. .++ -++|++.|++|..|++|..+.....+.+ ..+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 456899999999999999999999999999999997765432 222 5799999999996677777766655665 899
Q ss_pred EEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 80 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 80 lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+|||||..+|.++++..++.|++..+..|+.||++||+|+|.+|+.||||||+|||++ ....|||+|||+||.....
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~---~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS---GNDVIKIADFGLAREVRSK 163 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec---ccceeEecccccccccccC
Confidence 9999999999999998888899999999999999999999999999999999999994 5889999999999987654
Q ss_pred CCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc-----
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV----- 233 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~----- 233 (423)
.. | ..++.|..|+|||++.. ..|+.+.||||+|||++|+.+-++.|.|.+..+...++-.+++...
T Consensus 164 pP-----Y---TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~ 235 (538)
T KOG0661|consen 164 PP-----Y---TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP 235 (538)
T ss_pred CC-----c---chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence 32 2 36788999999999875 4589999999999999999999999999766544433333332211
Q ss_pred -----------------CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 -----------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 -----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++..+....+.++.++|.+|+.+||++|||+.+.++
T Consensus 236 eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 236 EGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred hHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 11234455567899999999999999999999999876
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-46 Score=363.08 Aligned_cols=254 Identities=28% Similarity=0.366 Sum_probs=218.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-------CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-------TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-------~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
...++|.+++.||+|+||.|++|++..+++.||+|++... ...+.+.+|+.+++.+.+|++|..+..+.....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 4567999999999999999999999999999999987664 234457789999999997778888888888888
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC-CeEEEeecccee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA-NQVYIIDFGLAK 154 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~-~~vkL~DFGla~ 154 (423)
.+++||||| ||+|.+++.. .+++.+.++..++.||+.|++|||++||+||||||+|||++ .. +.+||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld---~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD---GNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec---CCCCCEEEecccccc
Confidence 899999999 7899999998 78899999999999999999999999999999999999994 56 999999999998
Q ss_pred ecc-CCCCCCcccccCCCCcccccCccccchhcCCC-CC-CcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh
Q 014544 155 KYR-DPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QS-RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 155 ~~~-~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
... ... .....+||+.|+|||++.+.. |+ .++||||+||+||.|++|..||...+ ....+.+|...
T Consensus 170 ~~~~~~~--------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~---~~~l~~ki~~~ 238 (370)
T KOG0583|consen 170 ISPGEDG--------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN---VPNLYRKIRKG 238 (370)
T ss_pred ccCCCCC--------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc---HHHHHHHHhcC
Confidence 873 222 234789999999999999987 75 89999999999999999999998743 33555556666
Q ss_pred ccCCchHHhhccC-hHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 232 KVSTPIEVLCKSH-PAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 232 ~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.+..| ..+ +++++.|+.+||..||.+|+++.+|+ .+.+|..
T Consensus 239 ~~~~p-----~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~--~h~w~~~ 280 (370)
T KOG0583|consen 239 EFKIP-----SYLLSPEARSLIEKMLVPDPSTRITLLEIL--EHPWFQK 280 (370)
T ss_pred CccCC-----CCcCCHHHHHHHHHHcCCCcccCCCHHHHh--hChhhcc
Confidence 66655 333 88999999999999999999999997 4666665
No 15
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=365.34 Aligned_cols=255 Identities=25% Similarity=0.369 Sum_probs=215.0
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
..+++++.||+|.||+||.|.+.. ...||+|.++.... .+.+.+|+++|++|+| +++..++..+..++..+|||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H-~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMSPEAFLREAQIMKKLRH-EKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccChhHHHHHHHHHHhCcc-cCeEEEEEEEecCCceEEEEEec
Confidence 345678999999999999999964 33699998887554 4679999999999998 55666666666666899999999
Q ss_pred -CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 86 -GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 86 -~~sL~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
.|+|.+++.. .+..+...+.+.++.|||+|++||+++++|||||.++|||| +++..+||+|||+|+...+...
T Consensus 284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d~~Y-- 358 (468)
T KOG0197|consen 284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGDDEY-- 358 (468)
T ss_pred ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCCCce--
Confidence 9999999986 45679999999999999999999999999999999999999 4888999999999995544332
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.......-...|.|||.+....++.|||||||||+||||+| |+.||.+++..+..+.+ +...+.|.+..|
T Consensus 359 ----~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l----e~GyRlp~P~~C- 429 (468)
T KOG0197|consen 359 ----TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL----ERGYRLPRPEGC- 429 (468)
T ss_pred ----eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH----hccCcCCCCCCC-
Confidence 22334455788999999999999999999999999999999 99999998776544433 445555555555
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
|+++.++|..||..+|++||||+.+...|++++..
T Consensus 430 --P~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 430 --PDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred --CHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999988764
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-45 Score=356.79 Aligned_cols=269 Identities=25% Similarity=0.342 Sum_probs=219.8
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+--++|++++.||+|+||+||+|+-+.||..+|+|++++... ...++.|-.+|.. ...+.++.+++.+++.+++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCee
Confidence 345789999999999999999999999999999999887653 3347788888888 4558888888889999999
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
||||||+ ||++..+|.. .+.|++..+..++.+++.||+.||+.|+|||||||+|+|| |..|++||+||||+..+.
T Consensus 217 YLiMEylPGGD~mTLL~~-~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMR-KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEEecCCccHHHHHHh-cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhh
Confidence 9999999 9999999986 5679999999999999999999999999999999999999 699999999999996433
Q ss_pred CCCC------------------CCcccc----c------------------CCCCcccccCccccchhcCCCCCCcchHH
Q 014544 158 DPTT------------------NRHIPY----R------------------ENKNLTGTARYASCNTHLGIEQSRRDDLE 197 (423)
Q Consensus 158 ~~~~------------------~~~~~~----~------------------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVw 197 (423)
.... ....+. + .....+|||.|+|||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 2100 000000 0 02257899999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc--cCCchHHhhccChHHHHHHHHHHHcCCCCCCCC---hHHHHHH
Q 014544 198 SLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLKRL 272 (423)
Q Consensus 198 SlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~~l~~~ 272 (423)
||||||||||.|-+||.+.+.. +.+.+|..-+ +..|.+..+ +++.++||.+|+. ||++|.. ++||.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~---~T~rkI~nwr~~l~fP~~~~~---s~eA~DLI~rll~-d~~~RLG~~G~~EIK-- 443 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQ---ETYRKIVNWRETLKFPEEVDL---SDEAKDLITRLLC-DPENRLGSKGAEEIK-- 443 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHhhhccCCCcCcc---cHHHHHHHHHHhc-CHHHhcCcccHHHHh--
Confidence 9999999999999999986554 5555555544 555554433 6899999999999 9999975 45553
Q ss_pred HHHHHHhcCCCCCcceeceecc
Q 014544 273 FHDLFSREGYDFDFVFDWTILK 294 (423)
Q Consensus 273 L~~~~~~~~~~~~~~~dw~~~~ 294 (423)
.+.|....||+.+.
T Consensus 444 --------~HPfF~~v~W~~l~ 457 (550)
T KOG0605|consen 444 --------KHPFFKGVDWDHLR 457 (550)
T ss_pred --------cCCccccCCcchhh
Confidence 45666777887664
No 17
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-46 Score=334.44 Aligned_cols=260 Identities=23% Similarity=0.329 Sum_probs=223.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-.+|++++.||.|+||.|.+++.+.++..+|+|+++.... .+....|..+|+.+.| +.+..+.+-+.+....||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~-PFlv~l~~t~~d~~~lym 121 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSH-PFLVKLYGTFKDNSNLYM 121 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccC-ceeEEEEEeeccCCeEEE
Confidence 3579999999999999999999999999999999887643 2346789999999985 666667777788999999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
||||. ||.|..++.. .++|++..++.++.||+.||+|||+++|++|||||+|||+ |..|.+||+|||+|+.....
T Consensus 122 vmeyv~GGElFS~Lrk-~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 122 VMEYVPGGELFSYLRK-SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EEeccCCccHHHHHHh-cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecCc
Confidence 99999 8999999986 4579999999999999999999999999999999999999 69999999999999987654
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
+ .+.||||.|+|||++...+|+.++|+|||||++|||+.|..||...+. .+.+.+|+..++..|.
T Consensus 198 T----------~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~---~~iY~KI~~~~v~fP~-- 262 (355)
T KOG0616|consen 198 T----------WTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP---IQIYEKILEGKVKFPS-- 262 (355)
T ss_pred E----------EEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh---HHHHHHHHhCcccCCc--
Confidence 3 278999999999999999999999999999999999999999987554 6889999999998884
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
.++.++++|+..+|+.|-.+|- ..+..-.++ -.++.|....||+.+
T Consensus 263 ---~fs~~~kdLl~~LL~vD~t~R~--gnlknG~~d---Ik~H~wF~~v~W~~i 308 (355)
T KOG0616|consen 263 ---YFSSDAKDLLKKLLQVDLTKRF--GNLKNGVED---IKNHPWFKGVDWEAI 308 (355)
T ss_pred ---ccCHHHHHHHHHHHhhhhHhhh--cCcCCCccc---cccCcccccccHHHH
Confidence 4488999999999999999992 112111122 245667777889765
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-46 Score=351.48 Aligned_cols=252 Identities=26% Similarity=0.385 Sum_probs=201.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC--eeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE--DNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~--~~~lv~ 82 (423)
.+|..++.||+|+||.||++.+.++++..|||...... ..+.+.+|+.+|..|+| ++|+.......... .++|+|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~-p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNH-PNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCC-CCEEeeCCccccccCeeeEeee
Confidence 45888999999999999999999999999999765541 14458999999999994 55544433323333 689999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC-CCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-ANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~-~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +|+|.+++...+.++++..+..+++||++||+|||++|||||||||+|||+. . ++.+||+|||+++......
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~---~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD---PSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe---CCCCeEEeccCcccccccccc
Confidence 999 9999999997666899999999999999999999999999999999999994 5 6899999999998776411
Q ss_pred CCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ........||+.|||||++.+. ...+++|||||||++.||+||+.||... ......+..+..... .+.
T Consensus 173 ~~----~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~--~~~~~~~~~ig~~~~---~P~ 243 (313)
T KOG0198|consen 173 TK----SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF--FEEAEALLLIGREDS---LPE 243 (313)
T ss_pred cc----ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh--cchHHHHHHHhccCC---CCC
Confidence 11 1223467899999999999953 3456999999999999999999999874 122233333333331 124
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+...++++.++|+.+|+..+|++|||+++|+.
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~ 275 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLE 275 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 45567999999999999999999999999866
No 19
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=340.98 Aligned_cols=264 Identities=21% Similarity=0.301 Sum_probs=217.4
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
..+.|++.+.||.|..++||+|++..+++.||||+++.+.. .+.+.+|+..+..+.| ++|..++..+..+...|+|
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~H-PNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDH-PNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCC-CCcceEEEEEEecceeEEe
Confidence 46789999999999999999999999999999999876543 3568999999998876 6677777788889999999
Q ss_pred Eecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|.|+ +|++.+++.. ....+++..+..|+++++.||.|||.+|.||||||+.|||| +.+|.|||+|||.+..+...
T Consensus 103 mpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred ehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeeccc
Confidence 9999 9999999974 34569999999999999999999999999999999999999 58999999999999887765
Q ss_pred CCCCcccccCCCCcccccCccccchhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc-
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP- 236 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~- 236 (423)
.... .++. ..+.||+.|||||++... .|+.|+||||||++..||.+|..||..+.+. +.+...+....+.+
T Consensus 180 G~R~--~~rf-~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm---kvLl~tLqn~pp~~~ 253 (516)
T KOG0582|consen 180 GDRQ--VTRF-NTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM---KVLLLTLQNDPPTLL 253 (516)
T ss_pred Ccee--eEee-ccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH---HHHHHHhcCCCCCcc
Confidence 4222 2222 688999999999996533 4999999999999999999999999987654 33333333333211
Q ss_pred ----hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 237 ----IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 237 ----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.....+.++..|++++..||.+||.+||++++|++ ..+|+..
T Consensus 254 t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk--h~FFk~~ 299 (516)
T KOG0582|consen 254 TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK--HAFFKKA 299 (516)
T ss_pred cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc--cHHHhhc
Confidence 22333556789999999999999999999999977 4555543
No 20
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.3e-45 Score=333.10 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=214.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCCCCeE--EEeeeeCCeeEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSGIPNI--KWYGVDGEDNVL 80 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~----~~~E~~~l~~l~~~~~i~~i--~~~~~~~~~~~l 80 (423)
..|+.+.+|++|+||.||+|+++.+++.||+|.++.+..... -++|+.+|..++| ++|+.+ ...|..-+..||
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H-~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARH-PNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCC-CCeeeeEEEEeccccceeee
Confidence 468899999999999999999999999999998887664443 5899999999985 666666 345667778999
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||||..+|..++.....+|...++..++.|++.||+|||...|+||||||+|+|++ ..|.+||+|||+|+.+..+.
T Consensus 155 VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygsp~ 231 (419)
T KOG0663|consen 155 VMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS---HKGILKIADFGLAREYGSPL 231 (419)
T ss_pred eHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec---cCCcEEecccchhhhhcCCc
Confidence 999999999999998888999999999999999999999999999999999999995 89999999999999988764
Q ss_pred CCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC----
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST---- 235 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~---- 235 (423)
. .....+-|..|.|||++.|.. |+...|+||+|||+.||+++++.|.|....+...++.+.++..-..
T Consensus 232 k-------~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 232 K-------PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred c-------cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 3 223678899999999999876 9999999999999999999999999976655544444433221100
Q ss_pred ---------------chHHh-----hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 236 ---------------PIEVL-----CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 236 ---------------~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
|...+ +..+++.-.+|++.+|.+||.+|.|+++-++ +.+|.+.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~--h~~F~e~ 367 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK--HEYFRET 367 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc--ccccccC
Confidence 00011 1113477789999999999999999998765 5555553
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.7e-44 Score=349.43 Aligned_cols=263 Identities=19% Similarity=0.321 Sum_probs=204.3
Q ss_pred ccccCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee-
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV- 73 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~- 73 (423)
++-.++|++.+.||+|+||.||+|.+. .+++.||||++..... ...+.+|+.++..+.+|+++..+..++.
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~ 82 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK 82 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC
Confidence 345689999999999999999999853 3456799998875432 2357889999999965566666655443
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhc-------------------------------------------------------
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCR------------------------------------------------------- 97 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~------------------------------------------------------- 97 (423)
.....+++|||+ +|+|.+++....
T Consensus 83 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (338)
T cd05102 83 PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQE 162 (338)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchh
Confidence 445689999999 899999886421
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCC
Q 014544 98 ------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENK 171 (423)
Q Consensus 98 ------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~ 171 (423)
..+++.+++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++........ ....
T Consensus 163 ~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~-----~~~~ 234 (338)
T cd05102 163 TDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDY-----VRKG 234 (338)
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcch-----hccc
Confidence 237788999999999999999999999999999999999 47889999999999865432211 1122
Q ss_pred CcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHH
Q 014544 172 NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFAS 250 (423)
Q Consensus 172 ~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~ 250 (423)
...++..|+|||++.+..++.++|||||||++|||++ |..||.+..... .....+.... ... .....++.+.+
T Consensus 235 ~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~-~~~---~~~~~~~~l~~ 308 (338)
T cd05102 235 SARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE--EFCQRLKDGT-RMR---APENATPEIYR 308 (338)
T ss_pred CCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH--HHHHHHhcCC-CCC---CCCCCCHHHHH
Confidence 3456788999999999999999999999999999997 999998744321 1111121111 111 12345889999
Q ss_pred HHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 251 YFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 251 li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
++.+||+.||++||++.+|++.|++++.+
T Consensus 309 li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 309 IMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999999988754
No 22
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.6e-44 Score=349.41 Aligned_cols=245 Identities=23% Similarity=0.312 Sum_probs=211.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+.... ..+.+|+++++.|+|++.+. +...++...+.|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~-m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVE-MLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhh-HHHhhcccceEEEEe
Confidence 5799999999999999999999999999999987654432 24889999999999865554 444455677899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|||-|+|..++.+ .++++++.+..++.|++.||.|||+.+|+|||+||.|||+ +..+.+||||||+|+.....+.
T Consensus 81 e~a~g~L~~il~~-d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t~- 155 (808)
T KOG0597|consen 81 EYAVGDLFTILEQ-DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNTS- 155 (808)
T ss_pred hhhhhhHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCce-
Confidence 9997799999886 6789999999999999999999999999999999999999 5899999999999998765443
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......|||.|||||+..+.+|+..+|+||||||+||+++|++||.. ....+.+..|.......|.
T Consensus 156 ------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a---~si~~Lv~~I~~d~v~~p~----- 221 (808)
T KOG0597|consen 156 ------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA---RSITQLVKSILKDPVKPPS----- 221 (808)
T ss_pred ------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH---HHHHHHHHHHhcCCCCCcc-----
Confidence 22367899999999999999999999999999999999999999974 3455677777777666664
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+..|..|++.+|.+||.+|.+-.+|+.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 44889999999999999999999888754
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-44 Score=354.83 Aligned_cols=244 Identities=23% Similarity=0.332 Sum_probs=214.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+-|++++.||.|+.|.|-+|++..||+.+|||++.... ....+.+|+-+|+.+.|++ +..++.......++|+|
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~Hpn-Vl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPN-VLRLYDVWENKQHLYLV 90 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCC-eeeeeeeeccCceEEEE
Confidence 67999999999999999999999999999999987652 2345899999999998854 54555556678899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
+||+ +|.|.+++.. ++++++.++.+++.||+.|+.|+|..+|+||||||+|+|+ |..+.+||+|||+|..-....
T Consensus 91 lEyv~gGELFdylv~-kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVR-KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEecCCchhHHHHHh-hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCCc
Confidence 9999 9999999986 6679999999999999999999999999999999999999 577779999999997654433
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.-++.||++.|+|||++.|.+| +.++||||+|||||.|+||++||.+ .+....+.++..+.+..|
T Consensus 167 --------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD---dNir~LLlKV~~G~f~MP--- 232 (786)
T KOG0588|consen 167 --------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD---DNIRVLLLKVQRGVFEMP--- 232 (786)
T ss_pred --------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC---ccHHHHHHHHHcCcccCC---
Confidence 2347799999999999999997 6899999999999999999999985 345677888888888877
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+|.+.++||.+||..||+.|.+.++|++
T Consensus 233 --s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 233 --SNISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred --CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 566999999999999999999999999977
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3e-44 Score=319.57 Aligned_cols=260 Identities=20% Similarity=0.258 Sum_probs=214.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.+|...++||+|.||.||+|++..+|+.||||.++.... .....+|++.|+.++| ++|..+...+...+..-||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h-~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH-PNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC-cchhhhhhhccCCCceEEEE
Confidence 578999999999999999999999999999998776543 3357999999999996 55555666666778899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+..+|+..++.....++...+..++.+++.||+|||++.|+||||||.|+|++ .++.+||+|||+|+.+..+...
T Consensus 81 Efm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 81 EFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred EeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc---CCCcEEeecccchhccCCCCcc
Confidence 9999999999998788899999999999999999999999999999999999995 8999999999999998776543
Q ss_pred CcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc-----
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP----- 236 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~----- 236 (423)
. ...+-|..|.|||.+.|.. |+...|+||.|||+.||+.|.+-|.|.++.+....+.++++......
T Consensus 158 ~-------~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 158 Q-------THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred c-------ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccc
Confidence 2 1337799999999998765 99999999999999999999999999776655544444333221111
Q ss_pred ---------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 237 ---------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 237 ---------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
...+....+.+..+|+..||..||.+|+++.+.++ +..|+.
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~--~~yf~~ 286 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK--HPYFKS 286 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc--chhhhc
Confidence 11122334667899999999999999999998865 455544
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-44 Score=352.45 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=209.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~--~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..|...++||+|+.|.||.|+...+++.||||.+... ...+-+..|+.+|+.++|.+.+..+..|-.. +..|+||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-DELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-ceeEEEEee
Confidence 5688899999999999999999999999999976544 4455589999999999886666555544433 889999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ ||+|.|++.. ..+++.++..|+++++.||+|||.+||+|||||.+|||++ .++.+||+|||++..+......
T Consensus 352 m~ggsLTDvVt~--~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~~~K- 425 (550)
T KOG0578|consen 352 MEGGSLTDVVTK--TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEEQSK- 425 (550)
T ss_pred cCCCchhhhhhc--ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec---cCCcEEEeeeeeeeccccccCc-
Confidence 9 9999998874 3499999999999999999999999999999999999995 7888999999999988776653
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
....+||+.|||||+.....|+++.||||||++++||+.|++||-..+.. +.+..|.... .|.-.....
T Consensus 426 ------R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl---rAlyLIa~ng--~P~lk~~~k 494 (550)
T KOG0578|consen 426 ------RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL---RALYLIATNG--TPKLKNPEK 494 (550)
T ss_pred ------cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH---HHHHHHhhcC--CCCcCCccc
Confidence 34789999999999999999999999999999999999999999864433 2222222211 111122245
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
+++.|++|+.+||..|+++|+++.+|++ +.+++.
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~--HpFl~~ 528 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLE--HPFLKM 528 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhc--Chhhhh
Confidence 6899999999999999999999999987 455543
No 26
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=348.37 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=210.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
...|+..+.||+|.||.||+|.+..+++.||||++..+... ..+.+|+.++..+++ +++-.++.....+...+++|
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~-~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS-PNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc-chHHhhhhheeecccHHHHH
Confidence 45788899999999999999999999999999998766543 357889999999887 55555666667888999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||| ||++.+++.. ...+.+..+..++++++.||.|||.++.+|||||+.|||++ ..+.|||+|||.+..+.....
T Consensus 91 ey~~gGsv~~lL~~-~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKS-GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred HHhcCcchhhhhcc-CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEecceeeeeechhh
Confidence 999 9999999874 33458899999999999999999999999999999999996 569999999999988776554
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. ...++||+.|||||++.+..|+.|+||||||++++||++|.+||....+...... +.+. +.+.+.
T Consensus 167 r-------r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl----Ipk~---~PP~L~ 232 (467)
T KOG0201|consen 167 R-------RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL----IPKS---APPRLD 232 (467)
T ss_pred c-------cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe----ccCC---CCCccc
Confidence 2 2488999999999999998999999999999999999999999998766322111 1111 112233
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
..+++.|++||..||.+||+.||++.+|++ ++++++
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK--h~FIk~ 268 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLK--HKFIKR 268 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhh--hHHHHh
Confidence 466889999999999999999999999976 455544
No 27
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-43 Score=339.94 Aligned_cols=241 Identities=24% Similarity=0.340 Sum_probs=200.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.| +++..+..+..+....++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSH-PFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCC-CcHhhhHhhhccCCeEEEE
Confidence 47999999999999999999999999999999876432 23357889999999987 5565666666778889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 80 MEYVPGGELFSYLRN-SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCCc
Confidence 9999 8899998875 4579999999999999999999999999999999999999 478899999999998654321
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ..+..+.......+
T Consensus 156 ----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~---- 218 (291)
T cd05612 156 ----------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF---GIYEKILAGKLEFP---- 218 (291)
T ss_pred ----------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCcCCC----
Confidence 1457899999999999999999999999999999999999999875433 34444444444333
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCC-----hHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPD-----YGFLK 270 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~~l~ 270 (423)
..++..++++|.+||..||.+||+ +++++
T Consensus 219 -~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l 252 (291)
T cd05612 219 -RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVK 252 (291)
T ss_pred -ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence 344789999999999999999995 66654
No 28
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-44 Score=354.27 Aligned_cols=243 Identities=23% Similarity=0.342 Sum_probs=212.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+--.+|.+++.||+|+||+|++|..+.+++.+|||+++++. ..+..+.|.+|+.....|+.+..++.+++..++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 44578999999999999999999999999999999988764 3445889999999999889999999999999999
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|+||||+ ||++... ...+.|++..+..|+..|+.||.|||++||||||||.+|||+ |..|.+||+|||+++...
T Consensus 445 ~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccC
Confidence 9999999 6663222 224779999999999999999999999999999999999999 699999999999998754
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.... ...+++||+.|||||++.+..|+.++|+|||||+||||+.|..||.+.+ ..+.++.|.......|.
T Consensus 520 ~~g~-------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd---Eee~FdsI~~d~~~yP~ 589 (694)
T KOG0694|consen 520 GQGD-------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDD---EEEVFDSIVNDEVRYPR 589 (694)
T ss_pred CCCC-------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHhcCCCCCCC
Confidence 3222 3458999999999999999999999999999999999999999999854 44677778777777664
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
.++.+..+||+++|..+|++|..+
T Consensus 590 -----~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 590 -----FLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----cccHHHHHHHHHHhccCcccccCC
Confidence 448999999999999999999855
No 29
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.8e-43 Score=333.74 Aligned_cols=254 Identities=21% Similarity=0.266 Sum_probs=202.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|+||.||+|++..+++.||+|++.... ....+.+|+.+++.++| +++..+..++......++|||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKH-ANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCC-CCEeeEEEEEcCCCeEEEEEe
Confidence 57999999999999999999999999999999876432 23457899999999986 556667667777788999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|+.++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 84 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 84 YLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCCCc--
Confidence 99889999987766678999999999999999999999999999999999999 4788999999999976543221
Q ss_pred cccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV--------- 233 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 233 (423)
......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+........
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 159 -----TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred -----cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhcccc
Confidence 1124568999999999876 4589999999999999999999999987554332222222111000
Q ss_pred -------------CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 -------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 -------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+.......++.++.+||.+||..||.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00111122345778999999999999999999999864
No 30
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.8e-43 Score=339.45 Aligned_cols=240 Identities=22% Similarity=0.303 Sum_probs=201.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+|++.+.||+|+||.||+|++..+++.||||++... .....+..|.+++..+.+++++..+..++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 589999999999999999999999999999987643 223457788999999988888888888888888999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05587 81 EYVNGGDLMYHIQQ-VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGK 156 (324)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCC
Confidence 999 8899888865 4568999999999999999999999999999999999999 4788999999999875432211
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... +.+..+.......+
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~~~~~~~~----- 221 (324)
T cd05587 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED---ELFQSIMEHNVSYP----- 221 (324)
T ss_pred -------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCCCC-----
Confidence 122457899999999999999999999999999999999999999875433 34444444433333
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
..++.++.+++.+||..||.+|++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 3458899999999999999999986
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.9e-43 Score=341.19 Aligned_cols=237 Identities=23% Similarity=0.347 Sum_probs=199.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.++..+.| +++..+..+..+.+..++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~l 95 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSH-PFIVNMMCSFQDENRVYF 95 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCCCcEEEEEEcCCEEEE
Confidence 478999999999999999999999999999999876432 23457899999999976 556666666778889999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
||||+ +++|.+.+.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 96 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 96 LLEFVVGGELFTHLRK-AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEcCCCCChHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCC
Confidence 99999 8899988875 4578999999999999999999999999999999999999 57889999999999876432
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
. ....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... +.+..+.......+
T Consensus 172 ~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~~~~i~~~~~~~p--- 235 (329)
T PTZ00263 172 T----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF---RIYEKILAGRLKFP--- 235 (329)
T ss_pred c----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH---HHHHHHhcCCcCCC---
Confidence 2 1457899999999999999999999999999999999999999865432 34444544443333
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCC
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPD 265 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt 265 (423)
..++..+++||.+||..||.+||+
T Consensus 236 --~~~~~~~~~li~~~L~~dP~~R~~ 259 (329)
T PTZ00263 236 --NWFDGRARDLVKGLLQTDHTKRLG 259 (329)
T ss_pred --CCCCHHHHHHHHHHhhcCHHHcCC
Confidence 335789999999999999999997
No 32
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1e-42 Score=331.78 Aligned_cols=255 Identities=20% Similarity=0.252 Sum_probs=200.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.++|+ ++..+..+....+..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE-NIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCc-cccchhhhEecCCEEEEEE
Confidence 47999999999999999999999999999999876543 234578899999999874 4555655666778899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+.+++.+.+......+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~ 156 (287)
T cd07848 80 EYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSNA 156 (287)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCcccccccccc
Confidence 999777777766556679999999999999999999999999999999999999 47889999999999876432211
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc----------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK---------- 232 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 232 (423)
......||..|+|||++.+..++.++|||||||++|||++|+.||.+.........+..+....
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07848 157 ------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYS 230 (287)
T ss_pred ------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhc
Confidence 1124578999999999999899999999999999999999999998754433222221111000
Q ss_pred ------cCCc--------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 ------VSTP--------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ------~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+ .......++..+.+||.+||..||++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 231 NPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 00111235788999999999999999999998864
No 33
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.7e-42 Score=331.93 Aligned_cols=253 Identities=20% Similarity=0.246 Sum_probs=200.1
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+.+++.+.| +++..+..+..+....++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~ 82 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKH-ANIVLLHDIIHTKETLTLVF 82 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCC-CCcCeEEEEEecCCeEEEEE
Confidence 4689999999999999999999999999999998764432 2357789999999987 55667777777888999999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+.++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~- 158 (303)
T cd07869 83 EYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVPSH- 158 (303)
T ss_pred ECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCCCc-
Confidence 999999999888766779999999999999999999999999999999999999 4788999999999976433221
Q ss_pred CcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST------ 235 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~------ 235 (423)
......+|+.|+|||++.+. .++.++|||||||++|+|++|..||.+.... ...+..+.......
T Consensus 159 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 159 ------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI--QDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred ------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhCCCChhhcc
Confidence 11245689999999998764 5889999999999999999999999875432 11121111100000
Q ss_pred -------------------chHHhh--ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 -------------------PIEVLC--KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 -------------------~~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...... ..+++.+.+|+.+||+.||.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 123567899999999999999999998865
No 34
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-43 Score=331.47 Aligned_cols=270 Identities=20% Similarity=0.320 Sum_probs=224.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-+.|++++.||.|.-|+||+|+.+.++..+|+|++.+.. ...+...|.+||..+.| +.+|.++..+...+..|+
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDH-PFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDH-PFLPTLYASFETDKYSCL 154 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCC-CccchhhheeeccceeEE
Confidence 457889999999999999999999999999999987653 23357789999999987 778999888889999999
Q ss_pred EEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 81 VLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+|||| ||+|..+++.+ .+.|++..+..++..++.||+|||-.|||+|||||+|||| .++|+|.|+||.++.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCCC
Confidence 99999 99999998865 4569999999999999999999999999999999999999 5899999999999864321
Q ss_pred CC-------------------------------C-CC-----------------cccccCCCCcccccCccccchhcCCC
Q 014544 159 PT-------------------------------T-NR-----------------HIPYRENKNLTGTARYASCNTHLGIE 189 (423)
Q Consensus 159 ~~-------------------------------~-~~-----------------~~~~~~~~~~~gt~~Y~aPE~~~~~~ 189 (423)
.. . .. ...-.....++||-.|.|||++.|..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 00 0 00 00001234689999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC----
Q 014544 190 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---- 265 (423)
Q Consensus 190 ~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---- 265 (423)
.+.++|+|+|||++|||+.|..||.|.+. .+.+.+|+......|... ..+..+++||+++|.+||.+|..
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~---~~Tl~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNN---KETLRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCc---hhhHHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhhhccccc
Confidence 99999999999999999999999998654 366777877777766443 44689999999999999999987
Q ss_pred hHHHHHHHHHHHHhcCCCCCcceeceeccc
Q 014544 266 YGFLKRLFHDLFSREGYDFDFVFDWTILKY 295 (423)
Q Consensus 266 ~~~l~~~L~~~~~~~~~~~~~~~dw~~~~~ 295 (423)
+.+| .++.|....+|..++.
T Consensus 386 A~eI----------K~HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 386 AAEI----------KRHPFFEGVNWALIRC 405 (459)
T ss_pred hHHh----------hcCccccCCChhheec
Confidence 5665 3467777788987653
No 35
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.4e-43 Score=349.29 Aligned_cols=259 Identities=24% Similarity=0.327 Sum_probs=209.1
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcC-----CCCCCeEEEeeeeC
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQG-----GSGIPNIKWYGVDG 75 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~-----~~~i~~i~~~~~~~ 75 (423)
.+.+..+|+|.+.||+|+||.|-+|.+..|++.||||+++.... ..+...|+++|..|+. ..++..+..|+...
T Consensus 181 ~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 181 NDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred cceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 35667799999999999999999999999999999999987653 4567889999999982 34566678888899
Q ss_pred CeeEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
++.|||+|++..+|.++++..+ ..|+...+..++.||+.||.+||+.||||+||||+|||+..- ....|||+|||+|+
T Consensus 261 ~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~-~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 261 NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP-KRSRIKVIDFGSSC 339 (586)
T ss_pred cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC-CcCceeEEeccccc
Confidence 9999999999999999998643 459999999999999999999999999999999999999532 34589999999998
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc-
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV- 233 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~- 233 (423)
....... ..+.+..|+|||++.|.+|+.+.||||||||++||++|.+.|.|.+..+....+..+.+...
T Consensus 340 ~~~q~vy----------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~ 409 (586)
T KOG0667|consen 340 FESQRVY----------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP 409 (586)
T ss_pred ccCCcce----------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence 7654332 55778999999999999999999999999999999999999988665544333332221000
Q ss_pred ------------------------------------------------CCc-----hHH-hhccChHHHHHHHHHHHcCC
Q 014544 234 ------------------------------------------------STP-----IEV-LCKSHPAEFASYFHYCQSLT 259 (423)
Q Consensus 234 ------------------------------------------------~~~-----~~~-~~~~~~~~l~~li~~cl~~d 259 (423)
..| ... +....-..|.++|.+||.+|
T Consensus 410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d 489 (586)
T KOG0667|consen 410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD 489 (586)
T ss_pred HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence 000 000 00011246899999999999
Q ss_pred CCCCCChHHHHH
Q 014544 260 FDQRPDYGFLKR 271 (423)
Q Consensus 260 P~~RPt~~~l~~ 271 (423)
|.+|++..+.++
T Consensus 490 P~~R~tp~qal~ 501 (586)
T KOG0667|consen 490 PAERITPAQALN 501 (586)
T ss_pred chhcCCHHHHhc
Confidence 999999988755
No 36
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1e-42 Score=331.97 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=197.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.++..+.| +++..+..++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNS-RFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCC-CcEEEEEEEEccCCeEEEEE
Confidence 3889999999999999999999999999999876432 12346789999999977 45555556666778899999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ ++++.++|+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC
Confidence 999 78898777643 3468999999999999999999999999999999999999 478899999999998754322
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.......+.+.... .......
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~ 224 (285)
T cd05631 157 T--------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRV----KEDQEEY 224 (285)
T ss_pred e--------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHh----hcccccC
Confidence 1 124578999999999999999999999999999999999999998754332222222211 1111223
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCC-----hHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPD-----YGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~~l~~ 271 (423)
...++.++.+|+.+||+.||.+||+ ++++++
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 3456889999999999999999997 566654
No 37
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.2e-42 Score=332.62 Aligned_cols=262 Identities=19% Similarity=0.277 Sum_probs=201.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC----------------CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD----------------TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSG 64 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~----------------~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~ 64 (423)
+..++|++.+.||+|+||.||+|.+.. ++..||||++..... ...+.+|++++..+.| ++
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~n 80 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKD-PN 80 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCC-CC
Confidence 456899999999999999999998642 334799998876432 2357899999999976 56
Q ss_pred CCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 014544 65 IPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR------------------RKFSLKTVLMLADQMIARIEYVHSRGFL 125 (423)
Q Consensus 65 i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~------------------~~l~~~~~~~i~~qi~~aL~~LHs~gii 125 (423)
+..+..++.+.+..++||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+
T Consensus 81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv 160 (304)
T cd05096 81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV 160 (304)
T ss_pred eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 666766777778899999999 889999886421 2367888999999999999999999999
Q ss_pred ccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHH
Q 014544 126 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLY 205 (423)
Q Consensus 126 HrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~e 205 (423)
||||||+|||+ +.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++||
T Consensus 161 H~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~e 232 (304)
T cd05096 161 HRDLATRNCLV---GENLTIKIADFGMSRNLYAGDYY-----RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWE 232 (304)
T ss_pred ccCcchhheEE---cCCccEEECCCccceecccCcee-----EecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHH
Confidence 99999999999 47889999999999865433211 11223456789999999998889999999999999999
Q ss_pred HHh--CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 206 FLR--GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 206 llt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
|++ +..||.+............................+|..+.+||.+||..+|++||++++|.+.|+
T Consensus 233 l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 233 ILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 986 678888765433222222211111111001112345889999999999999999999999988875
No 38
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.6e-43 Score=340.33 Aligned_cols=249 Identities=21% Similarity=0.312 Sum_probs=202.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+..|+.++..+.| +++..+..++...+..|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS-EWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCC-CCCccEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999876432 23457789999999985 6666777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.....
T Consensus 80 ~e~~~g~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~~- 154 (333)
T cd05600 80 MEYVPGGDFRTLLNN-LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVTY- 154 (333)
T ss_pred EeCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCcccccc-
Confidence 9999 8899998865 4568999999999999999999999999999999999999 47889999999999765431
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH-
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV- 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~- 239 (423)
.....||+.|+|||++.+..++.++|||||||++|||++|..||.+.........+... ......+...
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~ 224 (333)
T cd05600 155 ---------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW-KETLQRPVYDD 224 (333)
T ss_pred ---------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc-cccccCCCCCc
Confidence 12557999999999999999999999999999999999999999875443222222111 1111111110
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+++++.++|.+||..+|.+||++++|++
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 01245889999999999999999999988865
No 39
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.3e-42 Score=337.13 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=199.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeee-----CCee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVD-----GEDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~-----~~~~ 78 (423)
+|++.+.||+|+||.||+|++..+++.||||.+... .....+.+|+++++.++|++ +..+..+... ....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD-IVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCC-EeeecceEeccCCCCCceE
Confidence 699999999999999999999999999999987642 22335789999999998754 4444333221 2357
Q ss_pred EEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 79 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
|+||||++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 80 ~lv~e~~~~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 80 YVVFELMESDLHQVIKA-NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEEecCCCCHHHHHHh-cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCcccccccc
Confidence 99999999999998865 4569999999999999999999999999999999999999 5788999999999986543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH---------
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK--------- 227 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~--------- 227 (423)
..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+..
T Consensus 156 ~~~~~----~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 156 DTPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231 (338)
T ss_pred ccCcc----ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 22111 01124578999999999876 5689999999999999999999999986543221111111
Q ss_pred --------------HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 228 --------------ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 228 --------------i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
........+........++.+.++|.+||..||++||+++++++ +.+|.
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~--hp~f~ 294 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA--DPYFK 294 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc--Cchhh
Confidence 01111222223333456788999999999999999999999976 44443
No 40
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.8e-42 Score=327.69 Aligned_cols=254 Identities=20% Similarity=0.261 Sum_probs=197.3
Q ss_pred CceEEeceeeecCceeEEEEEEcC-CCceEEEEEecCCCC----chhHHHHHHHHHHHc--CCCCCCeEEEeee-----e
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTK----HPQLLYEAKVYKILQ--GGSGIPNIKWYGV-----D 74 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~-~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~--~~~~i~~i~~~~~-----~ 74 (423)
.+|++.+.||+|+||.||+|++.. +++.||||++..... ...+.+|+.+++.+. .|+++..+..++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999864 467899998764332 234677888888775 2455665544432 3
Q ss_pred CCeeEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
....++||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg~~ 157 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLA 157 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEccccce
Confidence 45689999999999999987543 458999999999999999999999999999999999999 47889999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh---
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE--- 230 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~--- 230 (423)
+...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.........+.....
T Consensus 158 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 158 RIYSFQM--------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred EeccCCc--------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 8754331 12245789999999999988999999999999999999999999987554332222211110
Q ss_pred ----------------hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 ----------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+.+.....++..+.+++.+||+.||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 01111222333456788999999999999999999998864
No 41
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=346.44 Aligned_cols=259 Identities=22% Similarity=0.300 Sum_probs=205.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
|..+...+++.||+|.||+||+|+|.. .||||+++.+.. .+.|..|+.++++-+|.+ |..+..|...... .
T Consensus 389 Ip~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~N-IlLFMG~~~~p~~-A 463 (678)
T KOG0193|consen 389 IPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHEN-ILLFMGACMNPPL-A 463 (678)
T ss_pred cCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhh-heeeehhhcCCce-e
Confidence 455677899999999999999999943 499999886543 334899999999998854 4444444444444 8
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
||+.+| |.+|..++...+.+|...+.+.|+.||++|+.|||.++|||||||..|||+ .++++|||+|||++..-.-
T Consensus 464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeeee
Confidence 999999 778999998777889999999999999999999999999999999999999 4679999999999975432
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
-.... ......|...|||||+++.+ +|++.+||||||||+|||++|.+||.... ..+.+..+-.+-...
T Consensus 541 w~g~~-----q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~---~dqIifmVGrG~l~p 612 (678)
T KOG0193|consen 541 WSGEQ-----QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN---RDQIIFMVGRGYLMP 612 (678)
T ss_pred ecccc-----ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC---hhheEEEecccccCc
Confidence 21111 22355788999999999744 58999999999999999999999998432 223333333332333
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
.........|.++++|+..||..++++||.|.+|+..|+.++.
T Consensus 613 d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 613 DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 3344445668999999999999999999999999998887765
No 42
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.9e-42 Score=336.19 Aligned_cols=240 Identities=21% Similarity=0.308 Sum_probs=201.0
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+|++.+.||+|+||.||+|++..+++.||||++.... .......|..++..+.+++++..+..++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5899999999999999999999999999999877532 12235677888888888888888888888888999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 E~~~~g~L~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~ 156 (323)
T cd05616 81 EYVNGGDLMYQIQQ-VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGV 156 (323)
T ss_pred cCCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCC
Confidence 999 8899888765 4569999999999999999999999999999999999999 5788999999999975432221
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ..+..+.......|
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~i~~~~~~~p----- 221 (323)
T cd05616 157 -------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSIMEHNVAYP----- 221 (323)
T ss_pred -------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCCC-----
Confidence 122557899999999999999999999999999999999999999875443 34444554444333
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
..++.++.+++.+||+.+|++|++.
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 3458899999999999999999986
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-42 Score=337.62 Aligned_cols=239 Identities=22% Similarity=0.306 Sum_probs=195.3
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.+.| +++..+..++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRH-PFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999886432 22346789999999977 55666766777888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~----- 150 (323)
T cd05571 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCC-----
Confidence 889888765 5679999999999999999999999999999999999999 4788999999999875432211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|||++|..||...+.. ..+..+.......+ ..+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~---~~~~~~~~~~~~~p-----~~~~~ 220 (323)
T cd05571 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEEIRFP-----RTLSP 220 (323)
T ss_pred --cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH---HHHHHHHcCCCCCC-----CCCCH
Confidence 123567999999999999999999999999999999999999999764332 33333333333332 45688
Q ss_pred HHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
++.++|.+||..||++|| ++.+|++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 999999999999999999 6777643
No 44
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-43 Score=326.31 Aligned_cols=259 Identities=23% Similarity=0.301 Sum_probs=207.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC----eeEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE----DNVLV 81 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~----~~~lv 81 (423)
.-.|+-.+.+|.|+||.||.|....+++.||||..-.+... -.+|+.+|+.+.|++.+..+++|....+ ...+|
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~--knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY--KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc--CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 34688899999999999999999999999999965544432 3479999999988665555555544222 34699
Q ss_pred EeccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 82 LDLLGPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 82 ~e~~~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
|||+..+|...++.. +.+++...+..+..||++||.|||+.||+||||||.|+|++ .+.+.+||||||.|+.+..
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCcceeecc
Confidence 999999999999853 56799999999999999999999999999999999999995 4569999999999999876
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.... .....|..|+|||.+.|.. |+.+.||||.|||+.||+.|++.|.|.+..+....+-++++..-...+
T Consensus 179 ~epn--------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I 250 (364)
T KOG0658|consen 179 GEPN--------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDI 250 (364)
T ss_pred CCCc--------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 5543 3668899999999999875 999999999999999999999999997766555444444322111110
Q ss_pred ---------------------HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 238 ---------------------EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 238 ---------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
..+....+++..+|+.++|.++|.+|.++.+++. +.+|.
T Consensus 251 ~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~--h~fFd 310 (364)
T KOG0658|consen 251 KSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA--HPFFD 310 (364)
T ss_pred hhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc--chhhH
Confidence 1133456899999999999999999999988865 44443
No 45
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.7e-42 Score=341.65 Aligned_cols=258 Identities=20% Similarity=0.326 Sum_probs=204.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
.++|++.+.||+|+||.||+|++... +..||||++..... ...+.+|+++++.+..|++++.+..++.....
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 45799999999999999999986543 35799998875433 23478899999999656777778777778889
Q ss_pred eEEEEecc-CCCHHHHHHHhc-----------------------------------------------------------
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR----------------------------------------------------------- 97 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------------- 97 (423)
.++||||+ +++|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 99999999 899999885421
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 98 ----------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 98 ----------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
..+++..++.++.||+.||.|||++||+||||||+|||++ +++.+||+|||+++........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~----- 268 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNY----- 268 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcce-----
Confidence 2378889999999999999999999999999999999994 7889999999999876433211
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
.......++..|+|||++.+..++.++|||||||++|+|++ |+.||....... .+............ ....|+
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~---~~~~~~~~~~~~~~---~~~~~~ 342 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS---KFYKMVKRGYQMSR---PDFAPP 342 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH---HHHHHHHcccCccC---CCCCCH
Confidence 11123345678999999998899999999999999999997 999998654321 22222222222211 123588
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
++.+++.+||+.||++||++.+|++.|++++
T Consensus 343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999999875
No 46
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-43 Score=323.64 Aligned_cols=263 Identities=21% Similarity=0.253 Sum_probs=209.6
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEec----CCCCchhHHHHHHHHHHHcCCCCCCeEEEeee----eCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIEN----SGTKHPQLLYEAKVYKILQGGSGIPNIKWYGV----DGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~----~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~----~~~ 76 (423)
+..+|..++.||.|+||.|..|.++.+|+.||||.+. .....++..+|+++++.++|.+.+.....+.. .-.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4567777899999999999999999999999999655 33345568999999999997665555544443 346
Q ss_pred eeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 77 DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
..|+|+|+++.+|..+++. +..++...+..++.||+.||+|+|+.+|+||||||.|+|+ +.+..+||+|||+|+..
T Consensus 100 DvYiV~elMetDL~~iik~-~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKS-QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLARYL 175 (359)
T ss_pred eeEEehhHHhhHHHHHHHc-CccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccceeec
Confidence 7899999999999998874 4459999999999999999999999999999999999999 58889999999999988
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH-------
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI------- 228 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i------- 228 (423)
....... .-...+.|..|.|||++. ...|+.+.||||+||||.||++|+..|.|.+.....+.+..+
T Consensus 176 ~~~~~~~-----~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e 250 (359)
T KOG0660|consen 176 DKFFEDG-----FMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE 250 (359)
T ss_pred cccCccc-----chhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence 6431111 123668899999999886 456999999999999999999999999985543322222211
Q ss_pred ----------------HhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 229 ----------------CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 229 ----------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
.......+...+.++.++...+|+.+||..||.+|+|+++.++ +..+.
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~--hPYl~ 314 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA--HPYLA 314 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc--Chhhh
Confidence 1222333445556677889999999999999999999998865 44443
No 47
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.9e-42 Score=345.47 Aligned_cols=261 Identities=22% Similarity=0.263 Sum_probs=198.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeee-------eCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGV-------DGE 76 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-------~~~ 76 (423)
...++|++++.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++|++.+.....+.. ...
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 34578999999999999999999999999999999875433 335679999999988655544433321 112
Q ss_pred eeEEEEeccCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 77 DNVLVLDLLGPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++ ...+.+||+|||+|
T Consensus 141 ~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~DFGla 218 (440)
T PTZ00036 141 FLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeeeccccc
Confidence 4679999999899887753 245699999999999999999999999999999999999994 23457999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|.+||.+.........+.......
T Consensus 219 ~~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p 290 (440)
T PTZ00036 219 KNLLAGQR--------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTP 290 (440)
T ss_pred hhccCCCC--------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 87643221 1245789999999998765 58999999999999999999999998765433222222211100
Q ss_pred --------------cCCc-------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 233 --------------VSTP-------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 233 --------------~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
...+ ...+....|+++.+||.+||..||.+||++.+++. +.+|.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~--hp~f~ 355 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA--DPFFD 355 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC--ChhHH
Confidence 0000 01122345789999999999999999999999865 44443
No 48
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.5e-42 Score=340.55 Aligned_cols=257 Identities=18% Similarity=0.188 Sum_probs=200.7
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..++|++.+.||+|+||.||+|.+..+++.||||... ...+.+|+++++.|+| ++|..+..++......++|||+
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~H-pnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINH-PSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCC-CCCCCEeEEEEECCeeEEEEec
Confidence 3468999999999999999999999999999999753 2357899999999987 5566676667778889999999
Q ss_pred cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 85 LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 85 ~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
++++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+|+........
T Consensus 165 ~~~~L~~~l~~-~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~~~~-- 238 (391)
T PHA03212 165 YKTDLYCYLAA-KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDINAN-- 238 (391)
T ss_pred CCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCccccccccccc--
Confidence 99999888865 4568999999999999999999999999999999999999 47889999999999754322211
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhh----hHHHHHHHHhhc--------
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT----KKQKYDKICEKK-------- 232 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~----~~~~~~~i~~~~-------- 232 (423)
......||+.|+|||++.+..++.++|||||||++|||++|..||....... ....+..+....
T Consensus 239 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 239 ----KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred ----ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 1224679999999999999999999999999999999999998875422100 001111111100
Q ss_pred ------------------cC----CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 233 ------------------VS----TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 233 ------------------~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
.. .+.......+|.++.+||.+||+.||.+||+++++++ +.+|.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~--hp~f~ 380 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD--FAAFQ 380 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc--Chhhc
Confidence 00 0001111235778999999999999999999999976 45543
No 49
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=5.8e-42 Score=323.36 Aligned_cols=256 Identities=14% Similarity=0.237 Sum_probs=204.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEc---CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
|-..+|++.+.||+|+||.||+|.+. ..+..||+|+++..... ..+.+|+.++..++| +++..+..+......
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~ 80 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDH-SNIVRLEGVITRGNT 80 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCC-CCcCeEEEEEecCCC
Confidence 45678999999999999999999875 34668999988765332 347789999999876 667777777778889
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++||||+ +++|.+++......+++..++.++.||+.||+|||++|++||||||+|||+ +.++.++|+|||.+...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQED 157 (266)
T ss_pred cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCcccccc
Confidence 99999999 778888887655679999999999999999999999999999999999999 47889999999987653
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
...... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... .+..+.. ....
T Consensus 158 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~-~~~~ 227 (266)
T cd05064 158 KSEAIY------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAVED-GFRL 227 (266)
T ss_pred cccchh------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHHC-CCCC
Confidence 221110 1113345678999999999999999999999999999775 999998765432 2222222 2222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+. ...+|..+.+++.+||+.+|++||++++|.+.|+.+
T Consensus 228 ~~---~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 PA---PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CC---CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 22 244689999999999999999999999999988765
No 50
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-41 Score=326.51 Aligned_cols=263 Identities=26% Similarity=0.466 Sum_probs=192.0
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCC---CceEEEEEecCCCCchhH----------HHHHHHHHHHc--CCCCC
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTKHPQL----------LYEAKVYKILQ--GGSGI 65 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~~~~~----------~~E~~~l~~l~--~~~~i 65 (423)
+..+.+++|++.+.||+|+||.||+|.+..+ +..+|+|+.......... ..++..+..+. .+.++
T Consensus 6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i 85 (294)
T PHA02882 6 LIDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGI 85 (294)
T ss_pred eeccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCC
Confidence 3568889999999999999999999998877 667888865433221100 11122222222 23445
Q ss_pred CeEEEeeeeCC----eeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 66 PNIKWYGVDGE----DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 66 ~~i~~~~~~~~----~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
+.+..++.... ..+++|+++..++.+++... ..+++..+..++.|++.||+|||+++|+||||||+|||+ +.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~ 161 (294)
T PHA02882 86 PKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DG 161 (294)
T ss_pred CcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cC
Confidence 55555444332 45788999888888887653 346888899999999999999999999999999999999 47
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK 221 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~ 221 (423)
.+.++|+|||+|+.+..................||+.|+|||++.+..++.++|||||||++|||++|+.||.+......
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 78999999999987754322111111112245799999999999999999999999999999999999999987632211
Q ss_pred H------HHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 222 K------QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 222 ~------~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
. ..+..+.... ......|..+.+++..||..+|++||++++|++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGK------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhhhh------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 1 1111111111 12245588999999999999999999999998876
No 51
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=4.2e-42 Score=350.12 Aligned_cols=256 Identities=19% Similarity=0.258 Sum_probs=193.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCC-----CCCeEEEe-eeeCCe
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGS-----GIPNIKWY-GVDGED 77 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~-----~i~~i~~~-~~~~~~ 77 (423)
..++|++.+.||+|+||+||+|.+..+++.||||+++... .......|+.+++.+.+.. ++..+..+ ......
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~ 206 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGH 206 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCce
Confidence 3578999999999999999999999999999999986532 2334677888888887643 23334333 334567
Q ss_pred eEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccC-------------CCC
Q 014544 78 NVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGR-------------KAN 143 (423)
Q Consensus 78 ~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~-------------~~~ 143 (423)
.|+||++++++|.+++.. .+.+++..+..|+.||+.||.|||+ .|||||||||+|||+..++ +..
T Consensus 207 ~~iv~~~~g~~l~~~l~~-~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~ 285 (467)
T PTZ00284 207 MCIVMPKYGPCLLDWIMK-HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC 285 (467)
T ss_pred EEEEEeccCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence 899999999999998875 4579999999999999999999998 5999999999999995321 112
Q ss_pred eEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHH
Q 014544 144 QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQ 223 (423)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~ 223 (423)
.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+........
T Consensus 286 ~vkl~DfG~~~~~~~~----------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 355 (467)
T PTZ00284 286 RVRICDLGGCCDERHS----------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLH 355 (467)
T ss_pred eEEECCCCccccCccc----------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 5999999987543211 225689999999999999999999999999999999999999998755433322
Q ss_pred HHHHHHhhcc-------------------------CCchH--Hh-------hccChHHHHHHHHHHHcCCCCCCCChHHH
Q 014544 224 KYDKICEKKV-------------------------STPIE--VL-------CKSHPAEFASYFHYCQSLTFDQRPDYGFL 269 (423)
Q Consensus 224 ~~~~i~~~~~-------------------------~~~~~--~~-------~~~~~~~l~~li~~cl~~dP~~RPt~~~l 269 (423)
.+.++..... ..+.. .. .....+.+.+||..||.+||.+||+++++
T Consensus 356 ~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~ 435 (467)
T PTZ00284 356 LMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQM 435 (467)
T ss_pred HHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHH
Confidence 2222211000 00000 00 00013567899999999999999999999
Q ss_pred HH
Q 014544 270 KR 271 (423)
Q Consensus 270 ~~ 271 (423)
++
T Consensus 436 L~ 437 (467)
T PTZ00284 436 TT 437 (467)
T ss_pred hc
Confidence 76
No 52
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7e-42 Score=332.23 Aligned_cols=261 Identities=22% Similarity=0.296 Sum_probs=209.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+|++.+.||+|+||.||+|++..+++.||||++.... ....+..|..++..+.|++++..+..++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4789999999999999999999999999999876432 22346788889988888888888888888888999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 Ey~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~ 156 (323)
T cd05615 81 EYVNGGDLMYHIQQ-VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGV 156 (323)
T ss_pred cCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCc
Confidence 999 8899888764 4569999999999999999999999999999999999999 5788999999999875432221
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... ..+..+.......|
T Consensus 157 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~~~~~~~p----- 221 (323)
T cd05615 157 -------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQSIMEHNVSYP----- 221 (323)
T ss_pred -------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCCC-----
Confidence 122457899999999999999999999999999999999999999875432 34444544444333
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceecee
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTI 292 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~ 292 (423)
..++.++.+++.+||..+|.+|++..+. ..+++. .+.|...++|..
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~--~~~~i~---~h~~f~~~~~~~ 267 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCGPE--GERDIR---EHAFFRRIDWDK 267 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCCCC--CHHHHh---cCcccCCCCHHH
Confidence 3458899999999999999999986431 112221 234445567753
No 53
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.1e-42 Score=339.36 Aligned_cols=257 Identities=21% Similarity=0.323 Sum_probs=203.5
Q ss_pred cCceEEeceeeecCceeEEEEEE-----cCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASH-----VDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~-----~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
.++|++.+.||+|+||.||+|++ ..++..||||+++... ..+.+.+|+.++..+.+|+++..+..++.....
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 35799999999999999999975 2456689999886543 233578899999999666888888888888889
Q ss_pred eEEEEecc-CCCHHHHHHHhc-----------------------------------------------------------
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR----------------------------------------------------------- 97 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------------- 97 (423)
.++||||+ +|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 99999999 899998886422
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 98 ---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 98 ---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
..+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccc
Confidence 1467889999999999999999999999999999999994 6788999999999876443211
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+.+.......... .
T Consensus 271 -----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~---~~~~~~~~~~~~~~---~ 339 (375)
T cd05104 271 -----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS---KFYKMIKEGYRMLS---P 339 (375)
T ss_pred -----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH---HHHHHHHhCccCCC---C
Confidence 11123345678999999999999999999999999999998 899998654322 11222222222111 1
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
...|.++.+||..||+.||++||++.+|++.|++.
T Consensus 340 ~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 23478999999999999999999999999998864
No 54
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.2e-42 Score=334.83 Aligned_cols=244 Identities=24% Similarity=0.320 Sum_probs=201.1
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCC-ceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-EIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~-~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
+.-++|++.+.||+|+||.||+|.+..++ ..||+|++... .....+.+|+.++..+.| +++..+..++.+...
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINH-PFCVNLYGSFKDESY 105 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCCcceEEEEEeCCE
Confidence 44578999999999999999999876554 68999987532 233457789999999986 566667777778889
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRR-NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeec
Confidence 99999999 8899998875 4579999999999999999999999999999999999999 47889999999999865
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
.... ....||+.|+|||++.+..++.++|||||||++|||++|..||.+.+.. ..+..+.......|
T Consensus 182 ~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~---~~~~~i~~~~~~~p 248 (340)
T PTZ00426 182 DTRT----------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL---LIYQKILEGIIYFP 248 (340)
T ss_pred CCCc----------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH---HHHHHHhcCCCCCC
Confidence 4321 2457999999999999988999999999999999999999999875432 33444544443333
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCC-----ChHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRP-----DYGFLK 270 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~~l~ 270 (423)
..+++.+.++|.+||+.+|++|+ ++++|+
T Consensus 249 -----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~ 282 (340)
T PTZ00426 249 -----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVK 282 (340)
T ss_pred -----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHH
Confidence 34588999999999999999996 666654
No 55
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.8e-42 Score=334.49 Aligned_cols=244 Identities=22% Similarity=0.328 Sum_probs=195.8
Q ss_pred ceEEeceeeecCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+|++.+.||+|+||.||+|++. .+++.||+|++.... ....+..|+.++..+.+++++..+..++......
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 478899999876421 2234678999999998888888888888888899
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCcccc
Confidence 9999999 8899888865 4569999999999999999999999999999999999999 478899999999998654
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhH-HHHHHHHhhccCC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKK-QKYDKICEKKVST 235 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~ 235 (423)
...... .....||+.|+|||++.+.. ++.++|||||||++|||++|+.||......... .....+......
T Consensus 157 ~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~- 229 (332)
T cd05614 157 SEEKER------TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP- 229 (332)
T ss_pred ccCCCc------cccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC-
Confidence 332211 12457999999999998754 789999999999999999999999753322211 222222222222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
....+++.+.++|.+||..||++||++
T Consensus 230 ----~~~~~~~~~~~li~~~l~~dp~~R~~~ 256 (332)
T cd05614 230 ----FPSFIGPEAQDLLHKLLRKDPKKRLGA 256 (332)
T ss_pred ----CCCCCCHHHHHHHHHHcCCCHHHcCCC
Confidence 223468899999999999999999943
No 56
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-44 Score=314.69 Aligned_cols=254 Identities=24% Similarity=0.302 Sum_probs=218.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
.+.+.|++.+.||+|.|+.||++.+..+|+.+|+|+++.. ...+.+.+|++|.+.|+| ++|..+..........|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqH-P~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCC-CcEeehhhhhcccceeE
Confidence 5678999999999999999999999999999999987643 356679999999999997 56666766666778899
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
||+|++ |++|..-+.. +.-+++..+-.+++||++||.|+|.+||||||+||+|+|+...+...-+||+|||+|..+.+
T Consensus 87 lvFe~m~G~dl~~eIV~-R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVA-REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred EEEecccchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999999 8888766654 24588999999999999999999999999999999999997666677899999999998873
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.. ....+.|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+. ...++.|....+..+.+
T Consensus 166 g~--------~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~---~rlye~I~~g~yd~~~~ 234 (355)
T KOG0033|consen 166 GE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ---HRLYEQIKAGAYDYPSP 234 (355)
T ss_pred cc--------ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH---HHHHHHHhccccCCCCc
Confidence 22 23478999999999999999999999999999999999999999998543 36677788887777654
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. +..++++.++|+++||..||.+|.|+.|.++
T Consensus 235 ~-w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 235 E-WDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred c-cCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 3 4677899999999999999999999988654
No 57
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.6e-41 Score=331.13 Aligned_cols=272 Identities=21% Similarity=0.301 Sum_probs=213.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+..++|++.++||+|+||.||+|.+..++..+|+|++..... ...+.+|+++++.++| +++..+..++...+..++
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~l 80 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISI 80 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC-CcccceeEEEEECCEEEE
Confidence 567899999999999999999999999999999998765432 2458899999999986 566667777778889999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
||||+ +++|.+++.. .+.+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++..+..
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 81 CMEHMDGGSLDQVLKK-AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhh
Confidence 99999 8899998875 45689999999999999999999985 79999999999999 4778899999999876543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHH------------
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYD------------ 226 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~------------ 226 (423)
... ....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...........+.
T Consensus 157 ~~~---------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (333)
T cd06650 157 SMA---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESET 227 (333)
T ss_pred hcc---------ccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccccc
Confidence 221 24578999999999999889999999999999999999999997543321111100
Q ss_pred -------------------------HHHhhccCCchHHh-hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 227 -------------------------KICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 227 -------------------------~i~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.+.......+.... ...++.++.+||.+||..||++||++++|+. +.+++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~--h~~~~~~ 305 (333)
T cd06650 228 SPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV--HAFIKRS 305 (333)
T ss_pred CcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh--CHHHhcC
Confidence 00000000000000 0124678999999999999999999999965 7777766
Q ss_pred CCCCCcceece
Q 014544 281 GYDFDFVFDWT 291 (423)
Q Consensus 281 ~~~~~~~~dw~ 291 (423)
.....+.+.|.
T Consensus 306 ~~~~~~~~~~~ 316 (333)
T cd06650 306 EAEEVDFAGWL 316 (333)
T ss_pred ccccccHHHHH
Confidence 55555667774
No 58
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.6e-42 Score=332.60 Aligned_cols=235 Identities=20% Similarity=0.291 Sum_probs=194.9
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||++.... ....+..|.+++..+.+++++..+..++...+..|+||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999999999999999876532 22346778888888877788888888888888999999999 7
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+.+.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~----- 151 (321)
T cd05591 81 GDLMFQIQR-SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGV----- 151 (321)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCc-----
Confidence 899888764 4579999999999999999999999999999999999999 5788999999999876433221
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+..+.......+ ..++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~---~~~~~i~~~~~~~p-----~~~~~ 221 (321)
T cd05591 152 --TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED---DLFESILHDDVLYP-----VWLSK 221 (321)
T ss_pred --cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH---HHHHHHHcCCCCCC-----CCCCH
Confidence 122457899999999999999999999999999999999999999875433 34444544443333 23578
Q ss_pred HHHHHHHHHHcCCCCCCCCh
Q 014544 247 EFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~ 266 (423)
++.++|..||..||++||+.
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~ 241 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGC 241 (321)
T ss_pred HHHHHHHHHhccCHHHcCCC
Confidence 99999999999999999943
No 59
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-43 Score=327.67 Aligned_cols=247 Identities=22% Similarity=0.352 Sum_probs=214.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCch-----hHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP-----QLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~-----~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
..+|++.+.||+|.||.|-+|+....|+.||||.++++.... .+.+|++||..|+| ++|..|+..+...+..+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNH-PhII~IyEVFENkdKIvi 130 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNH-PHIIQIYEVFENKDKIVI 130 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCC-CceeehhhhhcCCceEEE
Confidence 468999999999999999999999999999999877664332 37899999999997 556667777778889999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
||||. +|.|.|++.. .+.+++.++..+++||+.|+.|+|.++++|||||.+|||+ |.++.+||+|||++..+.+.
T Consensus 131 vMEYaS~GeLYDYiSe-r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 131 VMEYASGGELYDYISE-RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEecCCccHHHHHHH-hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhccc
Confidence 99999 9999999987 4579999999999999999999999999999999999999 68999999999999887665
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.. -.+++|++-|++||++.|.+| ++.+|-|||||+||-|+.|..||.+.+. ...+..|..+.+..|.
T Consensus 207 kf--------LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh---k~lvrQIs~GaYrEP~- 274 (668)
T KOG0611|consen 207 KF--------LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH---KRLVRQISRGAYREPE- 274 (668)
T ss_pred cH--------HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH---HHHHHHhhcccccCCC-
Confidence 43 247899999999999999997 6899999999999999999999998543 3555666666665543
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
-|....-||+.||..||++|.|+++|...+.
T Consensus 275 -----~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 275 -----TPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred -----CCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 2678899999999999999999999977543
No 60
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.9e-42 Score=332.35 Aligned_cols=239 Identities=23% Similarity=0.330 Sum_probs=194.0
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||+|+||.||+|++..+++.||+|++... .....+.+|+.++..++| +++..+..++...+..++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNC-PFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 79999999999999999999999987642 223346789999999976 55555666666788999999999 889
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~------- 148 (312)
T cd05585 80 LFHHLQR-EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDD------- 148 (312)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCC-------
Confidence 9988875 5579999999999999999999999999999999999999 5788999999999875432221
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEF 248 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 248 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... +.+..+.......+ ..+++++
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~---~~~~~~~~~~~~~~-----~~~~~~~ 220 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN---EMYRKILQEPLRFP-----DGFDRDA 220 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH---HHHHHHHcCCCCCC-----CcCCHHH
Confidence 122457999999999999999999999999999999999999999864432 34444444433333 4568899
Q ss_pred HHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 249 ASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 249 ~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.++|.+||..||.+||++..+.++|
T Consensus 221 ~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 221 KDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 9999999999999998765444433
No 61
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.4e-42 Score=331.26 Aligned_cols=237 Identities=18% Similarity=0.278 Sum_probs=196.0
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|+++.+++.||||++... .....+..|..++..+.+++++..+..++...+..|+||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999987643 223346778888888777788888888888889999999999 7
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~----- 151 (320)
T cd05590 81 GDLMFHIQK-SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGK----- 151 (320)
T ss_pred chHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCC-----
Confidence 899887765 4579999999999999999999999999999999999999 4788999999999876432211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... +.+..+.......+ ..++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~~~i~~~~~~~~-----~~~~~ 221 (320)
T cd05590 152 --TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED---DLFEAILNDEVVYP-----TWLSQ 221 (320)
T ss_pred --cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH---HHHHHHhcCCCCCC-----CCCCH
Confidence 122457999999999999999999999999999999999999999875433 33444444333322 34588
Q ss_pred HHHHHHHHHHcCCCCCCCChHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGF 268 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~ 268 (423)
++.++|..||..||.+||++.+
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCC
Confidence 9999999999999999999844
No 62
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.2e-41 Score=329.58 Aligned_cols=236 Identities=22% Similarity=0.324 Sum_probs=193.6
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||+++... ....+..|..++..+.+|+++..+..++......++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999999999999999876432 23345667777777667788888877777888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~----- 151 (316)
T cd05592 81 GDLMFHIQS-SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEG----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCC-----
Confidence 899888765 4579999999999999999999999999999999999999 4788999999999976533221
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... +.+..+.......+ ..++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~---~~~~~i~~~~~~~~-----~~~~~ 221 (316)
T cd05592 152 --KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED---ELFDSILNDRPHFP-----RWISK 221 (316)
T ss_pred --ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCCCC-----CCCCH
Confidence 123567999999999999999999999999999999999999999875432 33333433322222 34588
Q ss_pred HHHHHHHHHHcCCCCCCCChH
Q 014544 247 EFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~ 267 (423)
++.++|..||..+|.+||++.
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~ 242 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVD 242 (316)
T ss_pred HHHHHHHHHccCCHHHcCCCh
Confidence 999999999999999999874
No 63
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.4e-41 Score=330.19 Aligned_cols=239 Identities=22% Similarity=0.321 Sum_probs=194.2
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv 81 (423)
|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+|++++..+. .|+++..+..++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 789999999999999999999999999999886431 2344677777766544 246677777777888899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|...+. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIH--TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence 9999 788877765 4579999999999999999999999999999999999999 578899999999987533221
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. ......|++.|+|||.+.+..++.++|||||||++|+|++|+.||.+.... +.+..+.......+
T Consensus 156 ~-------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~---~~~~~i~~~~~~~p---- 221 (324)
T cd05589 156 D-------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE---EVFDSIVNDEVRYP---- 221 (324)
T ss_pred C-------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCCC----
Confidence 1 123567999999999999999999999999999999999999999875432 33334444333332
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~ 267 (423)
..++..+.++|.+||..||.+||+..
T Consensus 222 -~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 222 -RFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred -CCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 34588999999999999999999543
No 64
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-41 Score=329.68 Aligned_cols=260 Identities=19% Similarity=0.310 Sum_probs=204.5
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+..++|++.+.||+|+||.||+|++..++..||+|++..... ...+.+|+++++.++| +++..+..+....+..++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~l 80 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS-PYIVGFYGAFYSDGEISI 80 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCC-CCCCeEEEEEEECCEEEE
Confidence 457899999999999999999999999999999998875432 3458899999999986 556666666677888999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
||||+ +++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+ +.++.+||+|||++.....
T Consensus 81 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 81 CMEHMDGGSLDQVLKE-AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred EeecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCcccccccc
Confidence 99999 7899998875 45689999999999999999999986 69999999999999 4788999999999876543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH-----------
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK----------- 227 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~----------- 227 (423)
... ....||..|+|||++.+..++.++|||||||++|||++|+.||...........+..
T Consensus 157 ~~~---------~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (331)
T cd06649 157 SMA---------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPH 227 (331)
T ss_pred ccc---------ccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcc
Confidence 221 245789999999999999999999999999999999999999975433211111000
Q ss_pred ----------------------------HHhhccCCc-hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 228 ----------------------------ICEKKVSTP-IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 228 ----------------------------i~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
......... .......+++++.+||.+||..||++||++++|++ +.++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~--h~~~~ 305 (331)
T cd06649 228 SISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN--HTFIK 305 (331)
T ss_pred ccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc--ChHHh
Confidence 000000000 00001235789999999999999999999999976 45554
Q ss_pred h
Q 014544 279 R 279 (423)
Q Consensus 279 ~ 279 (423)
.
T Consensus 306 ~ 306 (331)
T cd06649 306 R 306 (331)
T ss_pred h
Confidence 3
No 65
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.6e-41 Score=321.15 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=197.1
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHc--CCCCCCeEEEeeee-----CC
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQ--GGSGIPNIKWYGVD-----GE 76 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~-----~~ 76 (423)
+|++.+.||+|+||+||+|++..+++.||+|++..... .....+|+.+++.+. .|+++..+..++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 59999999999999999999999999999998765322 234677888888775 24555555444332 34
Q ss_pred eeEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+++||++.++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLARI 157 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcccc
Confidence 579999999889999887543 358999999999999999999999999999999999999 4788999999999986
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh----
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK---- 231 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---- 231 (423)
...... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+.........+......
T Consensus 158 ~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07863 158 YSCQMA--------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 229 (288)
T ss_pred ccCccc--------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChh
Confidence 643221 12456899999999999989999999999999999999999999775443322222221110
Q ss_pred ---------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 ---------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ---------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+.......++..+.++|.+||+.||++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 230 DWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0011122333456888999999999999999999998864
No 66
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.6e-41 Score=325.94 Aligned_cols=259 Identities=21% Similarity=0.284 Sum_probs=205.0
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.+|++.+.||+|+||.||+|++..+++.||||.++... ....+.+|+.+++.++| +++..+..+....+..++|||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-ANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCC-CCcceEEEEEeeCCeEEEEEe
Confidence 67999999999999999999999999999999876432 23357789999999986 556667677777888999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|+.++|.+++......+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++........
T Consensus 85 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~- 160 (309)
T cd07872 85 YLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKT- 160 (309)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCCccc-
Confidence 99889999887766678999999999999999999999999999999999999 47889999999999765433211
Q ss_pred cccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV--------- 233 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 233 (423)
.....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..+....+.+......
T Consensus 161 ------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 161 ------YSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred ------cccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcc
Confidence 123467899999999875 4589999999999999999999999987654433333322211100
Q ss_pred -------------CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 234 -------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 234 -------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
..+.......++.++.++|.+||..||.+||++.++++ +.++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~--h~~~~ 290 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK--HAYFR 290 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc--Chhhh
Confidence 00011122346788999999999999999999999966 44443
No 67
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=330.20 Aligned_cols=262 Identities=22% Similarity=0.284 Sum_probs=207.7
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----------------chhHHHHHHHHHHHcCCCCCC
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----------------HPQLLYEAKVYKILQGGSGIP 66 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----------------~~~~~~E~~~l~~l~~~~~i~ 66 (423)
+..-++|++++.||+|.||.|-+|++..+++.||||++.+... .+...+|+.+|++|.| ++++
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H-~nVV 171 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHH-PNVV 171 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCC-cCee
Confidence 4566899999999999999999999999999999999764321 2357899999999998 5555
Q ss_pred eEEEeee--eCCeeEEEEecc-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 67 NIKWYGV--DGEDNVLVLDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 67 ~i~~~~~--~~~~~~lv~e~~-~~sL~~~l~~~~~~-l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
.+..+-. ..+..|||+||| .|.+...- ..+. +++.+++.|+++++.||+|||.+|||||||||+|+|++ ++
T Consensus 172 ~LiEvLDDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~---~~ 246 (576)
T KOG0585|consen 172 KLIEVLDDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS---SD 246 (576)
T ss_pred EEEEeecCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc---CC
Confidence 5544433 456789999999 55443321 1233 89999999999999999999999999999999999995 78
Q ss_pred CeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCchh
Q 014544 143 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFLRGSLPWQGLKA 218 (423)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwSlGvil~elltG~~Pf~~~~~ 218 (423)
++|||+|||.+..+......... .......|||.|+|||...+.. .+.+.||||+||+||.|+.|++||-+.
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d--~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~-- 322 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSD--DQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD-- 322 (576)
T ss_pred CcEEeeccceeeecccCCccccH--HHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc--
Confidence 99999999999877433211110 0112468999999999988733 367899999999999999999999864
Q ss_pred hhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 219 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
...+.+.+|....+..|... .+.+.+++||.+||.+||++|.+..+|+. +.+....
T Consensus 323 -~~~~l~~KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik~--Hpwvt~~ 378 (576)
T KOG0585|consen 323 -FELELFDKIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIKL--HPWVTRD 378 (576)
T ss_pred -hHHHHHHHHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhhee--cceeccC
Confidence 44577888888888777543 34688999999999999999999999854 5555444
No 68
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.5e-42 Score=331.31 Aligned_cols=239 Identities=22% Similarity=0.317 Sum_probs=193.9
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||+|++.... ....+.+|+++++.+.| +++..+..++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-PFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCEEEEEEeCCCC
Confidence 46999999999999999999999999876432 22346789999999977 55666766777788999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|..++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 80 GELFFHLSR-ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCC-----
Confidence 888877764 4579999999999999999999999999999999999999 4788999999999875432221
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. ..+..+.......+ ..+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~~~~~~~~~~p-----~~~~~ 220 (323)
T cd05595 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---RLFELILMEEIRFP-----RTLSP 220 (323)
T ss_pred --ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCCCCC-----CCCCH
Confidence 112457999999999999999999999999999999999999999764432 33333333333332 35688
Q ss_pred HHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
++.++|.+||..||.+|| ++.++++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 999999999999999998 6666543
No 69
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.3e-43 Score=305.87 Aligned_cols=245 Identities=24% Similarity=0.329 Sum_probs=215.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-++|++++.||+|.||.||+|+.++++-.||+|++-+. ....++.+|+++...|+| ++|..++.|+.+....|+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~h-pnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRH-PNILRLYGYFHDSKRIYL 99 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCC-ccHHhhhhheeccceeEE
Confidence 46799999999999999999999999999999986543 345578999999999987 667777888889999999
Q ss_pred EEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 81 VLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
++||. .|.+...+... ..++++.....++.|+|.||.|+|.++||||||||+|+|++ ..+.+||+|||.+.....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg---~~~~lkiAdfGwsV~~p~ 176 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG---SAGELKIADFGWSVHAPS 176 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC---CCCCeeccCCCceeecCC
Confidence 99999 88888877633 45699999999999999999999999999999999999995 889999999999876542
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
. ....++||..|.+||+..+..++..+|+|++|++.||++.|..||.... ..+.|.+|....+..|
T Consensus 177 ~---------kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~---~~etYkrI~k~~~~~p-- 242 (281)
T KOG0580|consen 177 N---------KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS---HSETYKRIRKVDLKFP-- 242 (281)
T ss_pred C---------CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh---hHHHHHHHHHccccCC--
Confidence 1 2347899999999999999999999999999999999999999998654 5577888887777777
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++.+.+++|.+|+.++|.+|....+++.
T Consensus 243 ---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 243 ---STISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ---cccChhHHHHHHHHhccCccccccHHHHhh
Confidence 455899999999999999999999998876
No 70
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=332.86 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=220.0
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
+...|++.+.||.|.||.||+|+.+.+|+.+|+|++.+... ...+.+|+.+|+.+.+|+++..+...+.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 45689999999999999999999999999999998776543 2468999999999997788888888888899999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC-CCeEEEeeccceeecc
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-ANQVYIIDFGLAKKYR 157 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~-~~~vkL~DFGla~~~~ 157 (423)
+|||+| ||.|.+.+... .+++..+..++.|++.|+.|||+.||+||||||+|+|+...+. .+.+|++|||+|....
T Consensus 113 lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 999999 89999999865 3999999999999999999999999999999999999975433 3589999999999877
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
... .....+||+.|+|||++.+..|+..+||||+|+++|.|++|..||.+.+.. .....+....+....
T Consensus 191 ~~~--------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~---~~~~~i~~~~~~f~~ 259 (382)
T KOG0032|consen 191 PGE--------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF---EIFLAILRGDFDFTS 259 (382)
T ss_pred CCc--------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh---HHHHHHHcCCCCCCC
Confidence 622 123679999999999999999999999999999999999999999986543 444466666665543
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+ .+..++..++++|..|+..||..|+++.++++
T Consensus 260 ~-~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 260 E-PWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred C-CccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 3 34667899999999999999999999999887
No 71
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.1e-41 Score=331.70 Aligned_cols=239 Identities=21% Similarity=0.312 Sum_probs=194.6
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||++.... ....+.+|+++++.+.| +++..+..++...+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-p~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRH-PFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999999999999999886432 22356789999999877 56667777777888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+.+.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~----- 150 (328)
T cd05593 80 GELFFHLSR-ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAA----- 150 (328)
T ss_pred CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccc-----
Confidence 889887764 4579999999999999999999999999999999999999 4788999999999875432211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.. +....+....... ...+++
T Consensus 151 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~---~~~~~~~~~~~~~-----p~~~~~ 220 (328)
T cd05593 151 --TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEDIKF-----PRTLSA 220 (328)
T ss_pred --ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH---HHHHHhccCCccC-----CCCCCH
Confidence 112457999999999999989999999999999999999999999864432 2233333333222 245688
Q ss_pred HHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
++.++|.+||..||.+|| ++.+|++
T Consensus 221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 999999999999999997 6777654
No 72
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=9.7e-42 Score=317.12 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=206.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC------e
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE------D 77 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~------~ 77 (423)
.|+.+++||+|+||+||+|+.+.+|+.||+|.++.... .....+|+-+++.|+|.+++..+..+....+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 47788899999999999999999999999998776544 2346999999999999887777766665555 7
Q ss_pred eEEEEeccCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 78 NVLVLDLLGPSLEDLFVYCR---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 78 ~~lv~e~~~~sL~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
.++|+||+..+|..++.... ..++...+..++.||+.||+|||+++|+||||||+||||+ +.+.+||+|||+|+
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS---SSGVLKLADFGLAR 168 (323)
T ss_pred EEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC---CCCcEeeeccchHH
Confidence 89999999999999998766 4688899999999999999999999999999999999994 79999999999999
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
.+.-+. +.....++|..|+|||++.|. .|+...||||+|||++||++++..|.+....+....+.+++...-
T Consensus 169 a~~ip~-------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~ 241 (323)
T KOG0594|consen 169 AFSIPM-------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPN 241 (323)
T ss_pred HhcCCc-------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCC
Confidence 655333 223467889999999999988 599999999999999999999999999776544443333332110
Q ss_pred CC--c--------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 ST--P--------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 ~~--~--------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.. | .....+...+...+++..||+.+|.+|.+++..+.
T Consensus 242 e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~ 301 (323)
T KOG0594|consen 242 EKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALT 301 (323)
T ss_pred ccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhc
Confidence 00 0 01111222347899999999999999999988765
No 73
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.7e-41 Score=328.53 Aligned_cols=238 Identities=21% Similarity=0.291 Sum_probs=193.8
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||+++.. .....+..|..++..+.+++++..+..++.+.+..|+||||+ +
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4799999999999999999999999987643 223446778888877766788888888888888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~i~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05620 81 GDLMFHIQD-KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDN----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCC-----
Confidence 899888765 4579999999999999999999999999999999999999 4788999999999875322111
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... +.+..+....... ...++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~~~~~~~~~~-----~~~~~~ 221 (316)
T cd05620 152 --RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFESIRVDTPHY-----PRWITK 221 (316)
T ss_pred --ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCC-----CCCCCH
Confidence 122567899999999999999999999999999999999999999875433 2333332222222 234578
Q ss_pred HHHHHHHHHHcCCCCCCCChH-HH
Q 014544 247 EFASYFHYCQSLTFDQRPDYG-FL 269 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~-~l 269 (423)
++.++|.+||..||++||++. +|
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~ 245 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNI 245 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHH
Confidence 999999999999999999974 44
No 74
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.5e-41 Score=335.25 Aligned_cols=265 Identities=22% Similarity=0.337 Sum_probs=203.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||+||+|++..+++.||||++.... ....+..|+.++..+.| +++..+.....+....++|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~-~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADS-LWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCeEEEE
Confidence 47999999999999999999999999999999886432 22357789999999876 5566676777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 80 MEFLPGGDMMTLLMK-KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EcCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCcccccccc
Confidence 9999 8899998875 4679999999999999999999999999999999999999 478899999999997653221
Q ss_pred CCC-------ccc---------------------ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q 014544 161 TNR-------HIP---------------------YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 212 (423)
Q Consensus 161 ~~~-------~~~---------------------~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~P 212 (423)
... ..+ .......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 100 000 0001245799999999999999999999999999999999999999
Q ss_pred CCCchhhhhHHHHHHHHhhc--cCCchHHhhccChHHHHHHHHHHHcCCCC---CCCChHHHHHHHHHHHHhcCCCCCcc
Q 014544 213 WQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFD---QRPDYGFLKRLFHDLFSREGYDFDFV 287 (423)
Q Consensus 213 f~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~---~RPt~~~l~~~L~~~~~~~~~~~~~~ 287 (423)
|.+.... +.+.++.... ...|.. ..+++++.++|.+++. +|. .||++++|++ +.|...
T Consensus 236 f~~~~~~---~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~----------hp~f~~ 298 (363)
T cd05628 236 FCSETPQ---ETYKKVMNWKETLIFPPE---VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKT----------NPFFEG 298 (363)
T ss_pred CCCCCHH---HHHHHHHcCcCcccCCCc---CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhC----------CCCCCC
Confidence 9875433 3344444322 212211 1347889999998765 454 4578888743 455556
Q ss_pred eeceec
Q 014544 288 FDWTIL 293 (423)
Q Consensus 288 ~dw~~~ 293 (423)
.||+.+
T Consensus 299 ~~~~~~ 304 (363)
T cd05628 299 VDWEHI 304 (363)
T ss_pred CCHHHH
Confidence 677654
No 75
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=336.32 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=212.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.++|.+++.+|+|+||.+++++++..+..||+|.+.... .......|+.++.++.|++.+.....+..++...+||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 468999999999999999999999999999999876543 2234788999999988865555445555555559999
Q ss_pred Eecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+|| ||++.+.+...+ ..|+++.++.|+.||+.|+.|||+++|+|||||+.|||++ .++.|+|+|||+|+.+...
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhcCCc
Confidence 9999 999999998766 5699999999999999999999999999999999999996 7888899999999998766
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......||+.|++||++.+.+|+.|+|||||||++|||++-+.+|...+. ...+.+|+...+ .|+
T Consensus 160 ~~-------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m---~~Li~ki~~~~~-~Pl-- 226 (426)
T KOG0589|consen 160 DS-------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM---SELILKINRGLY-SPL-- 226 (426)
T ss_pred hh-------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch---HHHHHHHhhccC-CCC--
Confidence 52 23478999999999999999999999999999999999999999987543 355566666552 222
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
...++.+++.+|..||..+|..||++.+|+..
T Consensus 227 -p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 227 -PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 24458899999999999999999999999875
No 76
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=346.61 Aligned_cols=265 Identities=18% Similarity=0.217 Sum_probs=211.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEE-eee-----e-CC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKW-YGV-----D-GE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~-~~~-----~-~~ 76 (423)
..+++|.+.|.+|||+.||+|.+...+..||+|.+-... ....+.+|+.+|+.|.+|++|+.+.. ... . .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 567899999999999999999999887899999654432 23347899999999998888877654 211 1 24
Q ss_pred eeEEEEecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 77 DNVLVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LHs~g--iiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
+++|.|||| ||+|.|++.. ....|++.+++.|+.|+++|+.+||... |||||||-+||||+ .++..||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCcccc
Confidence 578999999 6899999973 3456999999999999999999999997 99999999999995 888999999999
Q ss_pred eeeccCCC-CCCccc-ccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH
Q 014544 153 AKKYRDPT-TNRHIP-YRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 153 a~~~~~~~-~~~~~~-~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (423)
|....... ...... ....-....|+.|+|||++. +.+.+.|+|||||||+||.|+....||.+... ..
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~-------la 265 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK-------LA 265 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc-------ee
Confidence 86432221 111100 00111335689999999874 77899999999999999999999999986421 23
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCC
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYD 283 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 283 (423)
|+..++..|.. ..++..|++||..||+.||++||++-+++..+-.+.......
T Consensus 266 Ilng~Y~~P~~---p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~ 318 (738)
T KOG1989|consen 266 ILNGNYSFPPF---PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPI 318 (738)
T ss_pred EEeccccCCCC---ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCc
Confidence 77778877754 456899999999999999999999999999888887765543
No 77
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.1e-42 Score=337.15 Aligned_cols=253 Identities=24% Similarity=0.361 Sum_probs=203.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||++... .....+..|++++..+.| ++++.+..+..+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADS-PWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCC-CCccchhhheecCCeEEEE
Confidence 4799999999999999999999999999999987643 223457789999999875 5566666667788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 80 MEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccC
Confidence 9999 88999998764 679999999999999999999999999999999999999 478899999999998765433
Q ss_pred CCCc----------------------ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchh
Q 014544 161 TNRH----------------------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA 218 (423)
Q Consensus 161 ~~~~----------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~ 218 (423)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 0000 000112345799999999999999999999999999999999999999987553
Q ss_pred hhhHHHHHHHHh--hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC-hHHHHH
Q 014544 219 ATKKQKYDKICE--KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD-YGFLKR 271 (423)
Q Consensus 219 ~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~~l~~ 271 (423)
. ..+.++.. .....+.. ..+++++.++|..||. +|.+||+ ++++++
T Consensus 236 ~---~~~~~i~~~~~~~~~p~~---~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 236 Q---ETYNKIINWKESLRFPPD---PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred H---HHHHHHhccCCcccCCCC---CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 3 33333433 22222211 2258999999999997 9999999 988865
No 78
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-42 Score=334.72 Aligned_cols=254 Identities=22% Similarity=0.297 Sum_probs=206.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
|-+..|+++++||+||.+.||++...+ .+.||+|...... ....+..|+.+|.+|+++..|..++.|...+...|
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 458899999999999999999998654 4456666433222 23348999999999999988989999999999999
Q ss_pred EEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 80 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 80 lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||||-..+|..++......+....+..+..||+.|+.++|.+||||.||||.|+|+ -.|.+||+|||+|..+..+
T Consensus 437 mvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl----VkG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 437 MVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL----VKGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE----EeeeEEeeeechhcccCcc
Confidence 999999999999998766666656899999999999999999999999999999999 5899999999999988877
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCC-----------CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIE-----------QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-----------~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (423)
++.. ....-+||+.|||||.+.... .++++||||||||||+|+.|+.||.... ....++..|
T Consensus 513 TTsI-----~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI 585 (677)
T KOG0596|consen 513 TTSI-----VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAI 585 (677)
T ss_pred ccce-----eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhh
Confidence 6543 234669999999999996433 4679999999999999999999998643 233445555
Q ss_pred HhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 229 CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.......+.+.... +.++.++|+.||..||.+||+..+|++
T Consensus 586 ~~P~~~Iefp~~~~--~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 586 TDPNHEIEFPDIPE--NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred cCCCccccccCCCC--chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 44433223222221 234999999999999999999998865
No 79
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1e-41 Score=336.32 Aligned_cols=255 Identities=22% Similarity=0.323 Sum_probs=199.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+|+.++..+.| ++++.+..++.+....++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADN-PWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceEEEEEcCCeEEEE
Confidence 47999999999999999999999999999999886432 22346789999999975 6677777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.++|+|||+++.+....
T Consensus 80 ~E~~~~g~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 80 MEYLPGGDMMTLLMK-KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred ECCCCCcHHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceeccccc
Confidence 9999 8899998875 4569999999999999999999999999999999999999 578999999999997654321
Q ss_pred CCCcc-----------------c---------cc-----CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhC
Q 014544 161 TNRHI-----------------P---------YR-----ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRG 209 (423)
Q Consensus 161 ~~~~~-----------------~---------~~-----~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG 209 (423)
..... + +. .....+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 10000 0 00 01134699999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC---hHHHHH
Q 014544 210 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLKR 271 (423)
Q Consensus 210 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~~l~~ 271 (423)
..||.+.... +.+..+.........+. ...+++++.++|.+|+. +|.+|++ +++++.
T Consensus 236 ~~Pf~~~~~~---~~~~~i~~~~~~~~~~~-~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQ---ETYRKIINWKETLQFPD-EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHH---HHHHHHHcCCCccCCCC-CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999875433 33333333221111111 12457899999999996 9999998 666633
No 80
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.9e-42 Score=334.16 Aligned_cols=248 Identities=22% Similarity=0.327 Sum_probs=200.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+..|+.++..+.| ++++.+..++.+.+..++|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~-~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNS-PWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCcceeeEEecCCeEEEE
Confidence 47999999999999999999999999999999887532 22346778888887765 6677777777778889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||++..+....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence 9999 899999998766789999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhc------CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc--
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHL------GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK-- 232 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-- 232 (423)
.. ......||+.|+|||++. +..++.++|||||||++|+|++|+.||...... ..+..+....
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~---~~~~~i~~~~~~ 227 (330)
T cd05601 157 MV------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA---KTYNNIMNFQRF 227 (330)
T ss_pred ce------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH---HHHHHHHcCCCc
Confidence 21 112347899999999987 456789999999999999999999999865433 2333333322
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+. ...++..+.+||..||. +|.+||++++++.
T Consensus 228 ~~~~~---~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPE---DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCC---CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111 12458899999999998 9999999988743
No 81
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.5e-41 Score=321.32 Aligned_cols=242 Identities=21% Similarity=0.205 Sum_probs=196.0
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeee----CCeeEEEEe
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVD----GEDNVLVLD 83 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~----~~~~~lv~e 83 (423)
..||+|++|.||+|.+ +++.||||.+..... .+.+.+|+.++..++|+ ++..+..++.+ ....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN-NILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC-CEEEEeeeEEecccCCCceEEEEE
Confidence 5789999999999998 688999998875432 23466999999999885 55555554444 346799999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +|+|.+++.. .+.+++...+.++.|++.||.|||+. +++||||||+|||+ ++++.+||+|||+++.......
T Consensus 103 y~~~g~L~~~l~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~~ 178 (283)
T PHA02988 103 YCTRGYLREVLDK-EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPPF 178 (283)
T ss_pred eCCCCcHHHHHhh-CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhccccc
Confidence 99 8899999875 45789999999999999999999984 99999999999999 4788999999999986543221
Q ss_pred CCcccccCCCCcccccCccccchhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
...|+..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.. +.+..+.......+.+
T Consensus 179 ----------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~---~~~~~i~~~~~~~~~~- 244 (283)
T PHA02988 179 ----------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK---EIYDLIINKNNSLKLP- 244 (283)
T ss_pred ----------cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhcCCCCCCC-
Confidence 3467899999999976 67899999999999999999999999875433 3334443333332222
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
...|+.+.+|+.+||+.||++||++++|++.|+.+.
T Consensus 245 --~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 245 --LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred --CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 245889999999999999999999999999998763
No 82
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=337.68 Aligned_cols=238 Identities=22% Similarity=0.331 Sum_probs=199.3
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCH
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSL 89 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL 89 (423)
-++.||+|+.|.||+|+. .++.||||..+. .-..+++-|++|+|.+ |..+...+.....+||||||| .|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl--~netVAVKKV~e-----lkETdIKHLRkLkH~N-II~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL--HNETVAVKKVRE-----LKETDIKHLRKLKHPN-IITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeec--cCceehhHHHhh-----hhhhhHHHHHhccCcc-eeeEeeeecCCceeEEeeeccccccH
Confidence 356799999999999987 577899995432 2345788899999854 545566666777899999999 8999
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccC
Q 014544 90 EDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRE 169 (423)
Q Consensus 90 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (423)
..+++. ++.++......|..+||.|+.|||.+.|||||||.-||||+ .+..|||+|||.++...+..+.
T Consensus 200 ~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STk------- 268 (904)
T KOG4721|consen 200 YEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTK------- 268 (904)
T ss_pred HHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee---ccceEEeccccchHhhhhhhhh-------
Confidence 999875 66799999999999999999999999999999999999996 6779999999999988766543
Q ss_pred CCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHH
Q 014544 170 NKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFA 249 (423)
Q Consensus 170 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~ 249 (423)
..++||..|||||++.+.+.+.|+||||||||||||+||..||.+.+.. ..+.-+-...+..|.+..| |+.|+
T Consensus 269 -MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss---AIIwGVGsNsL~LpvPstc---P~Gfk 341 (904)
T KOG4721|consen 269 -MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS---AIIWGVGSNSLHLPVPSTC---PDGFK 341 (904)
T ss_pred -hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh---eeEEeccCCcccccCcccC---chHHH
Confidence 3789999999999999999999999999999999999999999875433 2222233344455555444 99999
Q ss_pred HHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 250 SYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 250 ~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
-||++||+..|..||+|.+|+..|+
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHHh
Confidence 9999999999999999999988765
No 83
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.1e-41 Score=332.42 Aligned_cols=254 Identities=22% Similarity=0.247 Sum_probs=194.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeee-----
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVD----- 74 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~----- 74 (423)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++.+..+..+...
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 35689999999999999999999999999999999876432 234577899999999875544444333222
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....|+||||++++|...+. ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIH---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 171 (359)
T ss_pred cceeEEEEeCCCcCHHHHHh---ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCCcc
Confidence 13579999999888887764 358899999999999999999999999999999999999 478899999999997
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH-----
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC----- 229 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----- 229 (423)
....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.......+....
T Consensus 172 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 172 TACTNFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred ccccCcc--------CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 5433211 124578999999999999999999999999999999999999998754322111111100
Q ss_pred --------------hhccCC---chHH------------hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 --------------EKKVST---PIEV------------LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 --------------~~~~~~---~~~~------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...... .... .....++.+++||.+||..||++||++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000 0000 01123567899999999999999999999866
No 84
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.3e-41 Score=326.75 Aligned_cols=235 Identities=22% Similarity=0.311 Sum_probs=194.9
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||++... .....+..|.+++..+.+|+++..+..+....+..++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4699999999999999999999999987743 223446788888888877788888888888888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (318)
T cd05570 81 GDLMFHIQR-SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGV----- 151 (318)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCC-----
Confidence 899887765 4579999999999999999999999999999999999999 4788999999999875322211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... ..+..+.......+ ..++.
T Consensus 152 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~---~~~~~i~~~~~~~~-----~~~~~ 221 (318)
T cd05570 152 --TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED---ELFQSILEDEVRYP-----RWLSK 221 (318)
T ss_pred --cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCCCC-----CcCCH
Confidence 112457899999999999999999999999999999999999999865432 33334443333322 34588
Q ss_pred HHHHHHHHHHcCCCCCCCCh
Q 014544 247 EFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~ 266 (423)
.+.+||.+||..||.+||++
T Consensus 222 ~~~~li~~~l~~dP~~R~s~ 241 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGC 241 (318)
T ss_pred HHHHHHHHHccCCHHHcCCC
Confidence 99999999999999999998
No 85
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.2e-41 Score=328.42 Aligned_cols=239 Identities=20% Similarity=0.303 Sum_probs=194.2
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||||+++... ....+..|..++..+.+++++..+..++.+....|+||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999999999999999887532 22347789999999977788888888888889999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 81 g~L~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~----- 151 (329)
T cd05588 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCC-----
Confidence 899887764 4679999999999999999999999999999999999999 4788999999999875322211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh------hhHHHHHHHHhhccCCchHHh
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA------TKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~------~~~~~~~~i~~~~~~~~~~~~ 240 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........+.......|
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 225 (329)
T cd05588 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---- 225 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----
Confidence 122467999999999999999999999999999999999999999642211 11122333333333332
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~ 267 (423)
..++..+.++|.+||..||.+|+++.
T Consensus 226 -~~~~~~~~~li~~~L~~dP~~R~~~~ 251 (329)
T cd05588 226 -RSLSVKASSVLKGFLNKDPKERLGCH 251 (329)
T ss_pred -CCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 34588999999999999999999853
No 86
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-42 Score=349.73 Aligned_cols=260 Identities=23% Similarity=0.331 Sum_probs=218.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
..+.++.+.||+|.||+||+|+... ....||||.++..... .+|++|++++..|+| ++|+.+...+..++.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H-~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH-PNIVRLLGVCREGDP 563 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC-CCeEEEEEEEccCCe
Confidence 3456788999999999999998652 3457999998877654 469999999999997 667777777788999
Q ss_pred eEEEEecc-CCCHHHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRR-------------KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN 143 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~-------------~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~ 143 (423)
.++|+||+ .|+|.++|..... .++..+.+.|+.|||.|++||-++.+|||||..+|+||+ +..
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG---ENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec---cce
Confidence 99999999 9999999975421 288899999999999999999999999999999999995 889
Q ss_pred eEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhH
Q 014544 144 QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKK 222 (423)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~ 222 (423)
.|||+|||+++.....+.. +......-..+|||||.+....++.+||||||||+|||+++ |+.||.+....
T Consensus 641 ~VKIsDfGLsRdiYssDYY-----k~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--- 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYY-----KVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--- 712 (774)
T ss_pred EEEecccccchhhhhhhhh-----cccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---
Confidence 9999999999987665543 23334456789999999999999999999999999999998 99999998765
Q ss_pred HHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 223 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 223 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
+.+..+..+++ .+.+ ..+|.++.+||..||+.+|.+||+|.+|...|+.+.....
T Consensus 713 EVIe~i~~g~l-L~~P---e~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 713 EVIECIRAGQL-LSCP---ENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred HHHHHHHcCCc-ccCC---CCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 44444545544 3333 4459999999999999999999999999999998876543
No 87
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.9e-41 Score=326.00 Aligned_cols=238 Identities=23% Similarity=0.324 Sum_probs=193.8
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||+||+|++..+++.||||+++.. ........|..++..+.+|+++..+..++.+.+..++||||+ +
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4799999999999999999999999987653 223446678888877666788888888888888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05619 81 GDLMFHIQS-CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDA----- 151 (316)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCC-----
Confidence 899988875 4568999999999999999999999999999999999999 4788999999999875432211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.... +.+..+.......+ ..++.
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~i~~~~~~~~-----~~~~~ 221 (316)
T cd05619 152 --KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE---ELFQSIRMDNPCYP-----RWLTR 221 (316)
T ss_pred --ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCCC-----ccCCH
Confidence 122457899999999999999999999999999999999999999875433 23333322222211 33578
Q ss_pred HHHHHHHHHHcCCCCCCCChH-HH
Q 014544 247 EFASYFHYCQSLTFDQRPDYG-FL 269 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~-~l 269 (423)
++.++|.+||..||++||++. ++
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l 245 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDI 245 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHH
Confidence 899999999999999999986 44
No 88
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.9e-41 Score=328.90 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=202.9
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEE-eeeeC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKW-YGVDG 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~-~~~~~ 75 (423)
-+++|++.+.||.|+||.||+|.+.. +++.||+|++..... .+.+..|+.++..+.+++++..+.. +....
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 35789999999999999999997543 457899998875433 2346789999999965566666644 44456
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc---------------------------------------------------------
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR--------------------------------------------------------- 97 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~--------------------------------------------------------- 97 (423)
...+++|||+ +++|.+++....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 6788999999 889998885421
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcc
Q 014544 98 ---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLT 174 (423)
Q Consensus 98 ---~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~ 174 (423)
..+++..+..++.||+.||+|||++||+||||||+|||++ .++.++|+|||+++.+...... .......
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~-----~~~~~~~ 236 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDY-----VRKGDAR 236 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcch-----hhccCCC
Confidence 2578999999999999999999999999999999999994 6789999999999876432211 1122345
Q ss_pred cccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHH
Q 014544 175 GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFH 253 (423)
Q Consensus 175 gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~ 253 (423)
++..|+|||++.+..++.++|||||||++|||++ |..||.+.... +.+........... .....++++.+++.
T Consensus 237 ~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~l~~ 310 (337)
T cd05054 237 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID---EEFCRRLKEGTRMR---APEYATPEIYSIML 310 (337)
T ss_pred CCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc---HHHHHHHhccCCCC---CCccCCHHHHHHHH
Confidence 6778999999999999999999999999999998 99999764322 11212222211111 11345789999999
Q ss_pred HHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 254 YCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 254 ~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
+||+.+|++||++++|++.|++++..
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999998753
No 89
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-41 Score=334.81 Aligned_cols=262 Identities=18% Similarity=0.228 Sum_probs=204.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEc--CCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~--~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++..+|++++.||.|+||.||+|... .+++.||+|.+... ....+|+++++.++|+ ++..+..++......+++
T Consensus 89 ~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~-~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 89 VVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHR-AIINLIHAYRWKSTVCMV 164 (392)
T ss_pred hccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCC-CccceeeeEeeCCEEEEE
Confidence 45678999999999999999999764 34678999987643 3467899999999874 455555556677889999
Q ss_pred EeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 82 LDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 82 ~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||+ +..+.++|+|||+++.+.....
T Consensus 165 ~e~~~~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 165 MPKYKCDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred ehhcCCCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccCcccc
Confidence 9999999999884 35679999999999999999999999999999999999999 4788999999999986654322
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC-------
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS------- 234 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 234 (423)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.........+..+......
T Consensus 241 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 241 TP-----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred cc-----cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 11 122567999999999999999999999999999999999999999875433322233222221100
Q ss_pred ----------------------CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 235 ----------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 235 ----------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.+.......++.++.++|.+||..||++||++.+++. +.+|.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~--~p~f~~~ 381 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS--LPLFTKE 381 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh--Cchhhcc
Confidence 0000011234678899999999999999999999966 5565543
No 90
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=3.3e-41 Score=344.86 Aligned_cols=254 Identities=24% Similarity=0.249 Sum_probs=198.8
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeC---
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDG--- 75 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--- 75 (423)
+..+++|++.+.||+|+||+||+|++..+++.||||++..... ...+.+|+.++..+.|.+.+.....+....
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 3457899999999999999999999999999999998865432 223667888777776644332222221111
Q ss_pred ----CeeEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEE
Q 014544 76 ----EDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYI 147 (423)
Q Consensus 76 ----~~~~lv~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL 147 (423)
...++||||+ +++|.+++... ...+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEE
Confidence 1367999999 89999988643 34689999999999999999999999999999999999994 7889999
Q ss_pred eeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH
Q 014544 148 IDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 148 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (423)
+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ..+..
T Consensus 185 ~DFGls~~~~~~~~~~-----~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~---~~~~~ 256 (496)
T PTZ00283 185 GDFGFSKMYAATVSDD-----VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME---EVMHK 256 (496)
T ss_pred EecccCeecccccccc-----ccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH---HHHHH
Confidence 9999998765432111 123567999999999999999999999999999999999999999875432 23333
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+...... .+...+++++.+++..||..||.+||++.+++.
T Consensus 257 ~~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 257 TLAGRYD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred HhcCCCC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 3332221 123456899999999999999999999999876
No 91
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.1e-41 Score=324.04 Aligned_cols=261 Identities=21% Similarity=0.289 Sum_probs=205.4
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCce----EEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEI----VAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~----vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
.+-..+|++.+.||+|+||.||+|.+..+++. ||||++..... ...+..|+.+++.+.|++ +..+..++..
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~g~~~~- 80 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH-VCRLLGICLT- 80 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCC-CCeEEEEEcC-
Confidence 35578899999999999999999998765553 89998764332 345788999999998754 5455444444
Q ss_pred CeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
...+++++|+ +|+|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~ 157 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAK 157 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccc
Confidence 3567888888 899999998766678999999999999999999999999999999999999 477899999999998
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... +..+.....
T Consensus 158 ~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~----~~~~~~~~~ 228 (316)
T cd05108 158 LLGADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE----ISSILEKGE 228 (316)
T ss_pred cccCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHhCCC
Confidence 765432211 0112334678999999999999999999999999999998 999998754332 223333333
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
..+.+ ..++..+.+++..||..+|++||++.+|+..|..+....
T Consensus 229 ~~~~~---~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 229 RLPQP---PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 33322 234788999999999999999999999999988886543
No 92
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.6e-41 Score=327.51 Aligned_cols=255 Identities=23% Similarity=0.297 Sum_probs=197.9
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHH-HHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKV-YKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~-l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||+||+|++..+++.||+|++.... ....+..|... ++.+.| +++..+..++...+..++||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH-PFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCC-CCCCceeEEEEcCCeEEEEEeCCC
Confidence 47999999999999999999999999876432 12234445444 445554 66777777777888999999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~---- 151 (325)
T cd05602 80 GGELFYHLQR-ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNG---- 151 (325)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCC----
Confidence 7889888765 5568899999999999999999999999999999999999 4788999999999975432221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... +.+..+....... ...++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i~~~~~~~-----~~~~~ 220 (325)
T cd05602 152 ---TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA---EMYDNILNKPLQL-----KPNIT 220 (325)
T ss_pred ---CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH---HHHHHHHhCCcCC-----CCCCC
Confidence 122557999999999999999999999999999999999999999865433 3334444333222 23568
Q ss_pred HHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 246 AEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
..+.++|.+||+.+|.+||++.+... ++. +..+...++|..+
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~~~~~---~i~---~~~~~~~~~~~~~ 262 (325)
T cd05602 221 NSARHLLEGLLQKDRTKRLGAKDDFM---EIK---NHIFFSPINWDDL 262 (325)
T ss_pred HHHHHHHHHHcccCHHHCCCCCCCHH---HHh---cCcccCCCCHHHH
Confidence 89999999999999999999864322 222 3344556777543
No 93
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.5e-41 Score=328.87 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=204.0
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||+|++.... ....+..|+.++..+.+++++..+..++......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999887532 22347789999999988888888888888889999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|..++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~----- 151 (327)
T cd05617 81 GDLMFHMQR-QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGD----- 151 (327)
T ss_pred CcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCC-----
Confidence 899887764 4579999999999999999999999999999999999999 4788999999999875332211
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh----hhHHHHHHHHhhccCCchHHhhc
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA----TKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~----~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||...... ........+.......| .
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p-----~ 224 (327)
T cd05617 152 --TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP-----R 224 (327)
T ss_pred --ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC-----C
Confidence 112467999999999999999999999999999999999999999643211 11222333333333222 3
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
.++..+.+++.+||..||.+|+++... ..++++ ..+.|....+|...
T Consensus 225 ~~~~~~~~li~~~L~~dP~~R~~~~~~-~~~~~i---~~h~~f~~~~~~~~ 271 (327)
T cd05617 225 FLSVKASHVLKGFLNKDPKERLGCQPQ-TGFSDI---KSHTFFRSIDWDLL 271 (327)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCC-CCHHHH---HcCCCCCCCCHHHH
Confidence 458899999999999999999986422 112222 23455555677643
No 94
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7e-41 Score=333.66 Aligned_cols=259 Identities=20% Similarity=0.278 Sum_probs=205.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
.++|++++.||+|+||.||+|++... +..||||++..... .+.+.+|++++..+..|++++.+..++.....
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 56788999999999999999987533 34699998865432 24588999999999866788888878888889
Q ss_pred eEEEEecc-CCCHHHHHHHhc-----------------------------------------------------------
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR----------------------------------------------------------- 97 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------------- 97 (423)
.+|||||| +|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999 899998876421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 98 ------------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 98 ------------------------------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
..+++..++.++.||+.||.|||+++|+||||||+|||++ .
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~---~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA---Q 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe---C
Confidence 2377888999999999999999999999999999999994 6
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhh
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAAT 220 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~ 220 (423)
++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 789999999999876433221 11223456788999999999899999999999999999997 999998643321
Q ss_pred hHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 221 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
..+..+ ......+ ....+|..+.+++.+||+.+|++||++.+|.+.|+.++.
T Consensus 348 --~~~~~~-~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 348 --TFYNKI-KSGYRMA---KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --HHHHHH-hcCCCCC---CCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111222 2222222 123458899999999999999999999999999998764
No 95
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.4e-40 Score=348.06 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=198.3
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEee-eeCCe
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYG-VDGED 77 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~-~~~~~ 77 (423)
.+.-++|++++.||.|+||+||+|++..++..||+|++.... ....+..|+.++..|.|++.+..+..+. .....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 455689999999999999999999999999999999876443 2345788999999999865555444333 34467
Q ss_pred eEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-------CccccccCCCceEEecc-------
Q 014544 78 NVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSR-------GFLHRDIKPDNFLMGLG------- 139 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~-------giiHrDLKp~NILl~~~------- 139 (423)
+||||||+ +++|.+++... ...+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999 78999988743 24699999999999999999999984 49999999999999531
Q ss_pred -------CCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcC--CCCCCcchHHHHHHHHHHHHhCC
Q 014544 140 -------RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGS 210 (423)
Q Consensus 140 -------~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvil~elltG~ 210 (423)
+....+||+|||++..+..... .....||+.|+|||++.+ ..++.++||||||||||+|++|.
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~--------~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk 240 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM--------AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGK 240 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc--------ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCC
Confidence 1234599999999986543321 124579999999999865 34889999999999999999999
Q ss_pred CCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 211 LPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 211 ~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.||...... .+.+. ........+ ....+.++.+||..||..+|.+||++.+++.
T Consensus 241 ~PF~~~~~~--~qli~-~lk~~p~lp----i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 241 TPFHKANNF--SQLIS-ELKRGPDLP----IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCcCCcH--HHHHH-HHhcCCCCC----cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 999764332 12222 222222222 1345789999999999999999999999875
No 96
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=9.2e-41 Score=314.41 Aligned_cols=257 Identities=20% Similarity=0.336 Sum_probs=207.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+....|.+.+.||+|+||.||+|.+.++++.||+|+...... ...+.+|+++++.+.| +++..+..+.......+++|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-PNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCC-CChhheEEEEcCCCCcEEEE
Confidence 445679999999999999999999999999999998765432 3458899999999987 45555555666777889999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..++.++.|++.||+|||++|++||||||+|||+ ++++.+||+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 82 EFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccce
Confidence 999 889999886543 458999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... ....+ ...... .
T Consensus 159 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~-~~~~~~---~ 225 (263)
T cd05052 159 YT------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELL-EKGYRM---E 225 (263)
T ss_pred ee------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH-HCCCCC---C
Confidence 21 1112334668999999999999999999999999999998 999998754332 22222 221211 1
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
....+|.++.+++.+||..+|++||++.+|.+.|+.++
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 23456899999999999999999999999999998763
No 97
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-41 Score=329.80 Aligned_cols=239 Identities=22% Similarity=0.317 Sum_probs=193.4
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||+|++.... ....+..|++++..+.| +++..+..++......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~h-p~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-PFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999999999999876432 22346778888888876 56767777777888999999999 7
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
++|.+++.. .+.+++..+..++.||+.||.|||+ +||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 80 GELFFHLSR-ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCc----
Confidence 888877764 4579999999999999999999997 799999999999999 5788999999999875432221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.... .....+.......+ ..++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~---~~~~~i~~~~~~~p-----~~~~ 220 (325)
T cd05594 152 ---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE---KLFELILMEEIRFP-----RTLS 220 (325)
T ss_pred ---ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH---HHHHHHhcCCCCCC-----CCCC
Confidence 112457999999999999999999999999999999999999999865432 23333333333322 3468
Q ss_pred HHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 246 AEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
+++.++|.+||..||++|+ ++.++++
T Consensus 221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 221 PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 8999999999999999997 7777654
No 98
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-42 Score=337.82 Aligned_cols=258 Identities=27% Similarity=0.381 Sum_probs=212.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCc---e-EEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNE---I-VAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~---~-vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
..+-.+.++||+|+||+||+|+.+..+. . ||||..+... ...++.+|+++|+.++| ++|..++++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H-~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNH-PNVVRFYGVAVLEE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEcCCC
Confidence 4555677999999999999999875422 3 8999877422 23458999999999987 66777777778899
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+||||+| ||+|.+++......++..+.+.++.+.+.||+|||++++|||||-.+|+|++ ..+.+||+|||+++.
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS---KKGVVKISDFGLSRA 311 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec---CCCeEEeCccccccC
Confidence 999999999 9999999998766799999999999999999999999999999999999995 667789999999876
Q ss_pred ccCCCCCCcccccCCC-CcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 156 YRDPTTNRHIPYRENK-NLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
...... .. ...-..+|+|||.+....|+.++|||||||++||+++ |..||.+....... .++....+
T Consensus 312 ~~~~~~--------~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~---~kI~~~~~ 380 (474)
T KOG0194|consen 312 GSQYVM--------KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVK---AKIVKNGY 380 (474)
T ss_pred Ccceee--------ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHH---HHHHhcCc
Confidence 432111 11 2235689999999999999999999999999999999 89999998776433 34434444
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
+.+.+. ..|..+..++.+||..+|++||++.++.+.|+.+.....
T Consensus 381 r~~~~~---~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 381 RMPIPS---KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred cCCCCC---CCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 444433 448999999999999999999999999999999887654
No 99
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.5e-40 Score=315.77 Aligned_cols=263 Identities=21% Similarity=0.278 Sum_probs=206.3
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~----~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
|+.+...+|++.+.||+|+||+||+|++..++. .||+|++..... ...+.+|+.++..+.| +++..+..++.
T Consensus 1 ~~~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~ 79 (279)
T cd05109 1 MRILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS-PYVCRLLGICL 79 (279)
T ss_pred CcccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCC-CCCceEEEEEc
Confidence 667788999999999999999999999876665 489998765433 2357788888888876 45555555554
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
. ...+++|+|+ +|+|.+++......+++..++.++.||+.||+|||++||+||||||+|||++ +++.+||+|||+
T Consensus 80 ~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~ 155 (279)
T cd05109 80 T-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGL 155 (279)
T ss_pred C-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCc
Confidence 3 4567899998 8999999876566799999999999999999999999999999999999994 678899999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhh
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
++.......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.......... ....
T Consensus 156 ~~~~~~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~----~~~~ 226 (279)
T cd05109 156 ARLLDIDETEYH-----ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD----LLEK 226 (279)
T ss_pred eeecccccceee-----cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH----HHHC
Confidence 987654322111 112244678999999998889999999999999999998 999998654332222 2222
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
....+.. ...+..+.+++.+||..||++||++.+|++.|+++....
T Consensus 227 ~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 227 GERLPQP---PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred CCcCCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 2222221 345889999999999999999999999999888775443
No 100
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.9e-41 Score=327.84 Aligned_cols=261 Identities=21% Similarity=0.325 Sum_probs=201.9
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..+++.||+|++.... ....+..|+.++..+.+++++..+..++......++||||+ +
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999999999999999877532 22346788888888877788888888888889999999999 7
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|..++.. .+.+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~----- 151 (329)
T cd05618 81 GDLMFHMQR-QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGD----- 151 (329)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCC-----
Confidence 888877764 4679999999999999999999999999999999999999 4788999999999875432221
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh------hhHHHHHHHHhhccCCchHHh
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA------TKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~------~~~~~~~~i~~~~~~~~~~~~ 240 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ........+.......|
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---- 225 (329)
T cd05618 152 --TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---- 225 (329)
T ss_pred --ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----
Confidence 122467899999999999999999999999999999999999999532111 11122233333333333
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceec
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 293 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~ 293 (423)
..++..+.++|.+||..||.+||++.... .+.++ ..+.|...++|...
T Consensus 226 -~~~~~~~~~ll~~~L~~dP~~R~~~~~~~-~~~~i---~~hp~f~~~~~~~~ 273 (329)
T cd05618 226 -RSLSVKAASVLKSFLNKDPKERLGCHPQT-GFADI---QGHPFFRNVDWDLM 273 (329)
T ss_pred -CCCCHHHHHHHHHHhcCCHHHcCCCCCCC-CHHHH---hcCCCCCCCCHHHH
Confidence 34588999999999999999999853211 01222 23455555677543
No 101
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=6.9e-41 Score=326.38 Aligned_cols=252 Identities=23% Similarity=0.287 Sum_probs=198.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||++... .....+..|..++..+.| ++++.+..++......|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDR-RWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCCCceEEEEecCCeEEEE
Confidence 4799999999999999999999999999999987632 123346788888888765 6677777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence 9999 899999997666779999999999999999999999999999999999999 478899999999997765432
Q ss_pred CCCcccccCCCCcccccCccccchhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.... +.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~---~~~~~i~~~~~~~ 227 (331)
T cd05597 157 TV------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYGKIMNHKEHF 227 (331)
T ss_pred Cc------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH---HHHHHHHcCCCcc
Confidence 21 1123468999999999973 34788999999999999999999999865432 3333443332222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCC--CCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~~l~~ 271 (423)
..+.....++..++++|.+||..++.+ ||++++++.
T Consensus 228 ~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 222223446889999999998754433 677776644
No 102
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=6.7e-41 Score=319.51 Aligned_cols=248 Identities=19% Similarity=0.255 Sum_probs=197.1
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|++.+.||+|+||+||++.+..+++.||||++.... ....+.+|+.+++.++| +++..+..++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS-RFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCC-CCEeeeeeeecCCCeEEEEE
Confidence 4899999999999999999999899999999876432 12346789999999976 45555666666778899999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||++ ++.+.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence 999 78998877643 3469999999999999999999999999999999999999 477899999999998754322
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....|+..|+|||++.+..++.++|||||||++|||++|..||.+.......+.+....... ....
T Consensus 157 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~ 224 (285)
T cd05605 157 T--------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED----QEEY 224 (285)
T ss_pred c--------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc----cccc
Confidence 1 123478999999999999889999999999999999999999998754432222222211111 1112
Q ss_pred hccChHHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
...++..+.+||.+||..||++|| ++++|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 244688999999999999999999 6666533
No 103
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=7.1e-41 Score=325.11 Aligned_cols=235 Identities=23% Similarity=0.330 Sum_probs=189.4
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHH-HHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKV-YKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~-l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||+||+|++..+++.||||++.... ....+..|... ++.+.| +++..+..++...+..++||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~h-p~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCC-CCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999999999999999876432 22334555554 445554 66777777777888999999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~g~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (323)
T cd05575 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSK---- 151 (323)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCC----
Confidence 8899888765 5579999999999999999999999999999999999999 5788999999999875432221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+.+..+.......+ ..++
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~---~~~~~~i~~~~~~~~-----~~~~ 220 (323)
T cd05575 152 ---TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT---AEMYDNILNKPLRLK-----PNIS 220 (323)
T ss_pred ---ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH---HHHHHHHHcCCCCCC-----CCCC
Confidence 12245799999999999999999999999999999999999999987543 234444444333322 3458
Q ss_pred HHHHHHHHHHHcCCCCCCCChH
Q 014544 246 AEFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~ 267 (423)
..+.++|.+||+.||.+||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 221 VSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHHHhhcCHHhCCCCC
Confidence 8999999999999999999985
No 104
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.8e-41 Score=317.37 Aligned_cols=256 Identities=21% Similarity=0.317 Sum_probs=204.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCC-----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~-----~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+.-.+|++.+.||+|+||.||+|.+...+ ..||+|.+..... ...+.+|+.++..+.| +++..+..+....
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h-~~i~~~~~~~~~~ 80 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQH-PNIVCLLGVCTKE 80 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCC-cccceEEEEEcCC
Confidence 34468999999999999999999976544 6799998765432 2347889999999976 5566666666677
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 139 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~ 139 (423)
...+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++
T Consensus 81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-- 158 (283)
T cd05048 81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-- 158 (283)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc--
Confidence 7899999999 789999887532 4588899999999999999999999999999999999994
Q ss_pred CCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchh
Q 014544 140 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 218 (423)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~ 218 (423)
+++.++|+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 159 -~~~~~~L~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 159 -EGLTVKISDFGLSRDIYSADYY-----RVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred -CCCcEEECCCcceeeccccccc-----cccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 7789999999999865433211 11224456889999999998889999999999999999998 9999987554
Q ss_pred hhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 219 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.+ ....+..... .+ ....+|.++.+|+.+||+.||++||++.+|++.|+.
T Consensus 233 ~~---~~~~i~~~~~-~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 233 QE---VIEMIRSRQL-LP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH---HHHHHHcCCc-CC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 32 2222322221 11 224568999999999999999999999999998874
No 105
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2e-41 Score=335.82 Aligned_cols=255 Identities=23% Similarity=0.303 Sum_probs=197.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||++... .....+.+|+.++..+.| +++..+...+.+.+..++|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999987642 223457889999999987 5566666667788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|..+....
T Consensus 80 ~E~~~~g~L~~~i~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 80 MDYIPGGDMMSLLIR-LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccc
Confidence 9999 8899999875 4568999999999999999999999999999999999999 478899999999986432110
Q ss_pred CCCc------------------------------------ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHH
Q 014544 161 TNRH------------------------------------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 204 (423)
Q Consensus 161 ~~~~------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ 204 (423)
.... ..........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0000 0000112457999999999999999999999999999999
Q ss_pred HHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCC---ChHHHHH
Q 014544 205 YFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRP---DYGFLKR 271 (423)
Q Consensus 205 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---t~~~l~~ 271 (423)
||++|+.||.+...... ...+.........+ ....+++++.++|.+|+ .+|.+|+ ++.+++.
T Consensus 236 ell~G~~Pf~~~~~~~~---~~~i~~~~~~~~~~-~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 236 EMLVGQPPFLADTPAET---QLKVINWETTLHIP-SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ehhhCCCCCCCCCHHHH---HHHHhccCccccCC-CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 99999999987544322 22222211111111 11345789999999977 5999999 7777753
No 106
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.2e-41 Score=331.53 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=201.3
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
-.++|++.+.||+|+||.||+|++..+++.||||++... .....+..|+.+++.+.| +++..+..++.+....+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h-~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANS-EWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCcceEEEEEecCCEEE
Confidence 346899999999999999999999999999999987642 122346789999998876 56666777777888999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccC
Confidence 999999 8899998864 468999999999999999999999999999999999999 5789999999999987643
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCC----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGI----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+..+......
T Consensus 195 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~---~~~~~i~~~~~~ 265 (370)
T cd05596 195 NGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYSKIMDHKNS 265 (370)
T ss_pred CCcc------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH---HHHHHHHcCCCc
Confidence 2211 11245799999999998754 3789999999999999999999999875432 334444433221
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCC--CCChHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 271 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~~l~~ 271 (423)
...+. ...++.++.++|..||..+|.+ |+++++|++
T Consensus 266 ~~~~~-~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 266 LTFPD-DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCC-cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 11111 1245889999999999999988 999998855
No 107
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.7e-41 Score=333.78 Aligned_cols=254 Identities=22% Similarity=0.294 Sum_probs=197.0
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
..|++++.||+|+||+||+|++..+++.||||++.... ....+..|+.++..+.| ++++.+..++.+.+..++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADN-EWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCC-CCeeeeEEEEecCCEEEEE
Confidence 36899999999999999999999999999999886532 22347889999999876 5677777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +..+.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 80 MDYIPGGDMMSLLIR-MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccc
Confidence 9999 8899998875 4568999999999999999999999999999999999999 478899999999986542111
Q ss_pred CCCcc----------------------------------------cccCCCCcccccCccccchhcCCCCCCcchHHHHH
Q 014544 161 TNRHI----------------------------------------PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLG 200 (423)
Q Consensus 161 ~~~~~----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlG 200 (423)
..... .........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00000 00011245799999999999998999999999999
Q ss_pred HHHHHHHhCCCCCCCchhhhhHHHHHHHHh--hccCCchHHhhccChHHHHHHHHHHH--cCCCCCCCChHHHHH
Q 014544 201 YVLLYFLRGSLPWQGLKAATKKQKYDKICE--KKVSTPIEVLCKSHPAEFASYFHYCQ--SLTFDQRPDYGFLKR 271 (423)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~l~~li~~cl--~~dP~~RPt~~~l~~ 271 (423)
|++|||++|..||....... ....+.. .....+. ...+++++.+||.+|+ ..++..||++++|+.
T Consensus 236 ~il~elltG~~Pf~~~~~~~---~~~~i~~~~~~~~~~~---~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTE---TQLKVINWENTLHIPP---QVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHH---HHHHHHccccccCCCC---CCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999999998754322 2222222 1112111 1235789999999855 445556999998865
No 108
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-42 Score=304.26 Aligned_cols=268 Identities=19% Similarity=0.212 Sum_probs=207.1
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEE----EeeeeCC
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIK----WYGVDGE 76 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~----~~~~~~~ 76 (423)
.|.+++|+|.+.||+|||+-||+++...+++.||+|.+.... ..+..++|++..+++++++.+..+. .-.....
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 366899999999999999999999999999999999665443 4456899999999999855554441 1122345
Q ss_pred eeEEEEecc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCCCceEEeccCCCCeEEEeec
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR---RKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYIIDF 150 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LHs~g--iiHrDLKp~NILl~~~~~~~~vkL~DF 150 (423)
..||+++|+ .|+|.+.+..+. ..+++.+++.|+.+|++||++||+.. ++||||||.|||++ +.+.++|.||
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~ 173 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDL 173 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEec
Confidence 689999999 899999987543 35999999999999999999999998 99999999999996 6799999999
Q ss_pred cceeeccCCCCC--CcccccCCCCcccccCccccchhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHH
Q 014544 151 GLAKKYRDPTTN--RHIPYRENKNLTGTARYASCNTHLG---IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKY 225 (423)
Q Consensus 151 Gla~~~~~~~~~--~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~ 225 (423)
|.+....-.-.. .............|..|.|||.+.- ...+.++|||||||+||.|+.|.-||...-.. -....
T Consensus 174 GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~-GgSla 252 (302)
T KOG2345|consen 174 GSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ-GGSLA 252 (302)
T ss_pred cCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc-CCeEE
Confidence 998764322111 1111223334567899999999874 44689999999999999999999999642110 00111
Q ss_pred HHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 226 DKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 226 ~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
..+....+..|... .+++.+.++|+.||+.||.+||++.+|+..++++.
T Consensus 253 LAv~n~q~s~P~~~---~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 253 LAVQNAQISIPNSS---RYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred EeeeccccccCCCC---CccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 12333344444332 36899999999999999999999999999988763
No 109
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=324.48 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=218.1
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
|.+=|.+.+.||+|.|.+|-+|++.-+|+.||||++.+... ...+..|++.|+.++| ++|+.++.........||
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH-pNiVRLYEViDTQTKlyL 94 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH-PNIVRLYEVIDTQTKLYL 94 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC-cCeeeeeehhcccceEEE
Confidence 55779999999999999999999999999999999876543 3358999999999987 556666666667888999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+|+- +|+|.|++.+....+.+..+..++.||+.|+.|+|+..+|||||||+||++- ..-|.|||+|||++..+...
T Consensus 95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeeccccccCCCc
Confidence 99999 8899999998888899999999999999999999999999999999999885 57899999999999776544
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCC-CcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQS-RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s-~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
. .-...+|+..|-|||++.|..|+ +++||||||||||-|++|++||+..++. +.+-.|+.-++..|..
T Consensus 173 ~--------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---ETLTmImDCKYtvPsh 241 (864)
T KOG4717|consen 173 K--------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---ETLTMIMDCKYTVPSH 241 (864)
T ss_pred c--------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---hhhhhhhcccccCchh
Confidence 3 23478999999999999999986 6889999999999999999999976554 5666788888888855
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. +.+.++||..||..||.+|.+.++|..
T Consensus 242 v-----S~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 242 V-----SKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred h-----hHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 5 889999999999999999999999865
No 110
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9e-41 Score=314.91 Aligned_cols=257 Identities=20% Similarity=0.275 Sum_probs=202.3
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
|.+...++|++.+.||+|+||.||+|++..+++.||+|+..... ....+.+|+.++..+.|+ ++..+..++...+..
T Consensus 3 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~-~ii~~~~~~~~~~~~ 81 (267)
T cd06646 3 LRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHC-NIVAYFGSYLSREKL 81 (267)
T ss_pred cccCchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCC-CeeeeeEEEEeCCEE
Confidence 34556788999999999999999999999999999999886543 233477899999999875 455565666677889
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
++||||+ +++|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||++ +..+.++|+|||++....
T Consensus 82 ~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06646 82 WICMEYCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKIT 157 (267)
T ss_pred EEEEeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeec
Confidence 9999999 6789888764 4578999999999999999999999999999999999999 477889999999998764
Q ss_pred CCCCCCcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
.... ......|+..|+|||.+. ...++.++|||||||++|||++|..||....... ....+......
T Consensus 158 ~~~~-------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~ 227 (267)
T cd06646 158 ATIA-------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMSKSNFQ 227 (267)
T ss_pred cccc-------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh---hheeeecCCCC
Confidence 3221 112456889999999985 3447889999999999999999999997543221 11111122222
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
.+.......++..+.++|.+||..+|++||++++|++.
T Consensus 228 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 228 PPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred CCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 22222223467899999999999999999999998763
No 111
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=9.8e-41 Score=324.18 Aligned_cols=240 Identities=23% Similarity=0.329 Sum_probs=192.9
Q ss_pred eceeeecCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 12 GRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++.||+|+||.||+|++. .+++.||||++.... ....+..|+.+++.+.| +++..+..++...+..++||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~~~~~~~~~~~~~lv~ 79 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKH-PFIVDLIYAFQTGGKLYLIL 79 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCC-CchhceeeEEecCCeEEEEE
Confidence 368999999999999874 468899999876421 22346789999999987 55556666666778899999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+.+.. .+.+.+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 80 EYLSGGELFMHLER-EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred eCCCCchHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCC
Confidence 999 7899888865 4568899999999999999999999999999999999999 5788999999999875433221
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ..+..+.......+
T Consensus 156 -------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~---~~~~~~~~~~~~~~----- 220 (323)
T cd05584 156 -------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK---KTIDKILKGKLNLP----- 220 (323)
T ss_pred -------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH---HHHHHHHcCCCCCC-----
Confidence 112457899999999999988999999999999999999999999875432 33444444433332
Q ss_pred ccChHHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
..+++.+.++|.+||..+|++|| +++++++
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 34588999999999999999999 6666644
No 112
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.6e-40 Score=326.90 Aligned_cols=253 Identities=20% Similarity=0.234 Sum_probs=194.1
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee-----eC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DG 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~ 75 (423)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++.+..+..+.. ..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4589999999999999999999999899999999886532 22356789999999987555544443322 22
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...++||||+.++|.+.+. ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 95 ~~~~lv~e~~~~~l~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLART 168 (355)
T ss_pred ceeEEEhhhhcccHHHHHh---hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCccccc
Confidence 3579999999888887764 358999999999999999999999999999999999999 4788999999999986
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH------
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC------ 229 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~------ 229 (423)
...... .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+..............
T Consensus 169 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 169 AGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240 (355)
T ss_pred CCCccc--------cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 543221 124578999999999999999999999999999999999999998754322211111100
Q ss_pred -------------hhccC-----Cc----------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 -------------EKKVS-----TP----------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 -------------~~~~~-----~~----------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..... .+ ........+..+++||.+||..||++||++.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00000 00 00011123567899999999999999999999876
No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.3e-41 Score=329.52 Aligned_cols=246 Identities=22% Similarity=0.295 Sum_probs=192.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
..+|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|+++++.++| +++..+..+.......++||
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNH-PNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCC-CCcceeeeEeccCCeEEEEE
Confidence 3578899999999999999999999999999998865432 2457899999999986 55666666667788899999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+. ....+..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 152 e~~~~~~L~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 152 EFMDGGSLEGT-----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred ecCCCCccccc-----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceecccccc
Confidence 999 7777542 335678889999999999999999999999999999999 4788999999999987643321
Q ss_pred CCcccccCCCCcccccCccccchhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
......||..|+|||++.. ...+.++|||||||++|||++|+.||......+.......+.... .
T Consensus 224 -------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~-- 293 (353)
T PLN00034 224 -------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ-P-- 293 (353)
T ss_pred -------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccC-C--
Confidence 1124578999999998743 234578999999999999999999997433222222222221111 1
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......++.++.+||.+||..||++||++.+|++
T Consensus 294 -~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 294 -PEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1122355889999999999999999999999876
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-40 Score=328.72 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=194.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee-----eC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DG 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~ 75 (423)
+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.|++.+..+..+.. ..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999999999999999886532 23457789999999987555544433322 22
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...|+||||++++|.+.+. ..++...+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.
T Consensus 102 ~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~ 175 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLART 175 (364)
T ss_pred CeEEEEEeCCCCCHHHHHH---hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCCccc
Confidence 4579999999989888774 358899999999999999999999999999999999999 4788999999999976
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
...... .....+|..|+|||++.+..++.++|||||||++|+|++|+.||.+.+.... +.++.......
T Consensus 176 ~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~ 244 (364)
T cd07875 176 AGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ---WNKVIEQLGTP 244 (364)
T ss_pred cCCCCc--------ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCC
Confidence 543221 1245789999999999999999999999999999999999999987544322 22221110000
Q ss_pred c-------------------------hHH------------hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 P-------------------------IEV------------LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~-------------------------~~~------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. ... .....+..+++||.+||..||.+||+++++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000 00112457899999999999999999998865
No 115
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=4.9e-41 Score=333.20 Aligned_cols=253 Identities=23% Similarity=0.306 Sum_probs=197.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++++.||+|+||.||+|.+..+++.||||++.... ....+.+|++++..+.| ++++.+..++.+....|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDS-PWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCC-CCcceEEEEEEcCCeeEEE
Confidence 47999999999999999999999999999999875432 22347789999999876 5677777777888899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 80 MEFLPGGDLMTMLIK-YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeeccccccccccc
Confidence 9999 8999998875 4579999999999999999999999999999999999999 478899999999997432211
Q ss_pred CCCc-------ccc---------------------------------cCCCCcccccCccccchhcCCCCCCcchHHHHH
Q 014544 161 TNRH-------IPY---------------------------------RENKNLTGTARYASCNTHLGIEQSRRDDLESLG 200 (423)
Q Consensus 161 ~~~~-------~~~---------------------------------~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlG 200 (423)
.... ... ......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 0000 000 000135799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchhhhhHHHHHHHHhh--ccCCchHHhhccChHHHHHHHHHHHcCCCCCC---CChHHHHH
Q 014544 201 YVLLYFLRGSLPWQGLKAATKKQKYDKICEK--KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQR---PDYGFLKR 271 (423)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~~l~~ 271 (423)
|++|||++|..||.+.... ..+..+... ....+. ...++.++.+||.+||. +|.+| +++.+++.
T Consensus 236 vil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p~---~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 236 AIMFECLIGWPPFCSENSH---ETYRKIINWRETLYFPD---DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred hhhhhhhcCCCCCCCCCHH---HHHHHHHccCCccCCCC---CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 9999999999999865433 233333321 122111 12357899999999997 77765 58777754
No 116
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.5e-40 Score=311.56 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=200.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
..+|++.+.||+|+||.||+|.. .+..||+|..........+.+|+.+++.+.|.+.+..+..+.......+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46899999999999999999976 4778999998876666678999999999987554444444445566789999999
Q ss_pred -CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 86 -GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 86 -~~sL~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+++|.+++..... .+++..++.++.||+.||+|||++|++||||||+||++ ++++.+||+|||+++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~-- 157 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceeccccCC--
Confidence 7899999875433 48899999999999999999999999999999999999 4788999999999876543221
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
...++..|+|||.+.+..++.++|||||||++|+|++ |+.||....... ....+.. .... ....
T Consensus 158 --------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~---~~~~~~~-~~~~---~~~~ 222 (256)
T cd05082 158 --------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPRVEK-GYKM---DAPD 222 (256)
T ss_pred --------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhc-CCCC---CCCC
Confidence 2344568999999998889999999999999999997 999997643322 2222211 1111 1224
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.+|+.+.+++.+||..+|++||++.++++.|++
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 568999999999999999999999999998875
No 117
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=2.3e-40 Score=317.53 Aligned_cols=258 Identities=18% Similarity=0.235 Sum_probs=205.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCc--eEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNE--IVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~--~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..++. .+++|.++... ....+.+|+.++.++.+|+++..+..+.......+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 579999999999999999999877664 46888776422 2245788999999997677888887777788889999
Q ss_pred Eecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeE
Q 014544 82 LDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 145 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~v 145 (423)
|||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCCeE
Confidence 9999 789999986432 248899999999999999999999999999999999999 478899
Q ss_pred EEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHH
Q 014544 146 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQK 224 (423)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (423)
||+|||++........ ......+..|+|||.+.+..++.++|||||||++|||++ |..||.+..... .
T Consensus 159 kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~---~ 227 (297)
T cd05089 159 KIADFGLSRGEEVYVK--------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE---L 227 (297)
T ss_pred EECCcCCCccccceec--------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---H
Confidence 9999999864321111 112233567999999998889999999999999999997 999998754432 2
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCC
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGY 282 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 282 (423)
+..+... ...+ ....++..+.+|+.+||..+|.+||++++|++.|+.++.....
T Consensus 228 ~~~~~~~-~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 228 YEKLPQG-YRME---KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHHhcC-CCCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 2223221 1111 1134588999999999999999999999999999999876654
No 118
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7e-41 Score=326.34 Aligned_cols=250 Identities=22% Similarity=0.251 Sum_probs=197.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||+|++.... ....+..|..++..+.| +++..+..++.+.+..|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDC-QWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999876421 22236677777777655 6777777778888999999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++......+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCC
Confidence 9999 899999998766789999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...... +.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~---~~~~~i~~~~~~~ 227 (331)
T cd05624 157 TV------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYGKIMNHEERF 227 (331)
T ss_pred ce------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH---HHHHHHHcCCCcc
Confidence 21 1123579999999999876 45788999999999999999999999865432 3344444332222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCC--CCChHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFL 269 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~~l 269 (423)
+.+.....++.++.++|.+||...+.+ |++++++
T Consensus 228 ~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~ 263 (331)
T cd05624 228 QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDF 263 (331)
T ss_pred cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHH
Confidence 222223456889999999999865543 3455554
No 119
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.6e-41 Score=332.43 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=196.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
..|++++.||+|+||+||+|++..+++.||||++.... ....+.+|+++++.+.| +++..+...+.+.+..++|
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h-~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADN-EWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCC-CcCCeEEEEEEeCCEEEEE
Confidence 36999999999999999999999999999999876432 22357789999999976 5666777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 80 MDYIPGGDMMSLLIR-MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EeCCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccc
Confidence 9999 8899998865 4568999999999999999999999999999999999999 478899999999986432110
Q ss_pred CCCc----------------------------------------ccccCCCCcccccCccccchhcCCCCCCcchHHHHH
Q 014544 161 TNRH----------------------------------------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLG 200 (423)
Q Consensus 161 ~~~~----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlG 200 (423)
.... ..-.......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0000 000001235799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC---hHHHH
Q 014544 201 YVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLK 270 (423)
Q Consensus 201 vil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~~l~ 270 (423)
|++|||++|+.||.+.... +....+.........+ ....+++++.++|.+|+ .+|.+|++ +++++
T Consensus 236 vil~elltG~~Pf~~~~~~---~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 303 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPL---ETQMKVINWQTSLHIP-PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIK 303 (382)
T ss_pred HHHHHHHhCCCCCCCCCHH---HHHHHHHccCCCcCCC-CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHh
Confidence 9999999999999875433 2222333211111111 11345788999998876 59999997 66554
No 120
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4e-40 Score=316.42 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=201.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|+||.||+|++..+++.||+|.+.... ....+.+|+.+++.++| +++..+..++......++|||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~nI~~~~~~~~~~~~~~lv~e 84 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-ANIVTLHDIIHTEKSLTLVFE 84 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCC-CCcceEEEEEecCCeEEEEEe
Confidence 57999999999999999999999999999999876432 22357789999999987 556667777778889999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|+.++|.+++......+++..+..++.||+.||+|||+.||+||||||+|||+ +.++.++|+|||++........
T Consensus 85 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~~~-- 159 (301)
T cd07873 85 YLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTK-- 159 (301)
T ss_pred ccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCCCC--
Confidence 99989999988766779999999999999999999999999999999999999 4788999999999976433221
Q ss_pred cccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV--------- 233 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 233 (423)
......+++.|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+..+.....
T Consensus 160 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (301)
T cd07873 160 -----TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 234 (301)
T ss_pred -----cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc
Confidence 11234578899999998764 478899999999999999999999987554322222222111000
Q ss_pred -------CCc------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 -------STP------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 -------~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+ .......+++.+++||.+||..||.+||+++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 235 NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 11222356888999999999999999999999866
No 121
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-40 Score=325.14 Aligned_cols=252 Identities=22% Similarity=0.278 Sum_probs=199.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||++++..+++.||+|++.... ....+..|..++..+.| +++..+..++.+....++|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDN-QWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCC-CCEeeEEEEEecCCEEEEE
Confidence 47999999999999999999999999999999875321 22236678888877755 6677777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++......+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..+....
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence 9999 899999998766779999999999999999999999999999999999999 478899999999997654322
Q ss_pred CCCcccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... +.+..+.......
T Consensus 157 ~~------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~---~~~~~i~~~~~~~ 227 (332)
T cd05623 157 TV------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---ETYGKIMNHKERF 227 (332)
T ss_pred cc------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH---HHHHHHhCCCccc
Confidence 21 112357999999999986 345789999999999999999999999875433 3444444433333
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCC--CCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~~l~~ 271 (423)
+.+..+..++.++.+||.+|+..++.+ |++++++++
T Consensus 228 ~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 228 QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 333333456899999999999765554 567777643
No 122
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.7e-40 Score=315.89 Aligned_cols=241 Identities=21% Similarity=0.282 Sum_probs=190.3
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||+|+||+||+|.+..+++.||+|++.... ....+..|+++++.+.| +++..+..++......++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHS-RFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCC-CcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 699999999999999999999999876432 12346789999999965 56666666667778899999999 889
Q ss_pred HHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 89 LEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 89 L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++..+......
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~--- 153 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSK--- 153 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCcc---
Confidence 9877643 23468999999999999999999999999999999999999 47889999999999876543221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh-HHHHHHHHhhccCCchHHhhccC
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-KQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......+..... .....+
T Consensus 154 ----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 224 (280)
T cd05608 154 ----TKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-----TYPDKF 224 (280)
T ss_pred ----ccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-----CCcccC
Confidence 2245789999999999999999999999999999999999999976432211 111222221111 122456
Q ss_pred hHHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
+..+.+++.+||+.||++|| +++++++
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 88999999999999999999 4555544
No 123
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=5.4e-41 Score=330.86 Aligned_cols=268 Identities=22% Similarity=0.324 Sum_probs=204.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+.|++.+.||+|+||.||+|++..+++.||||++... .....+..|+.++..+.| ++++.+...+.+....++|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADG-AWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEEEE
Confidence 4799999999999999999999999999999988642 223457789999998876 5566666667788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 80 ~E~~~gg~L~~~l~~-~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 80 MEFLPGGDMMTLLMK-KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EeCCCCccHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCccccccc
Confidence 9999 8899998875 4569999999999999999999999999999999999999 478999999999987553221
Q ss_pred CCCcc----------------------------cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q 014544 161 TNRHI----------------------------PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 212 (423)
Q Consensus 161 ~~~~~----------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~P 212 (423)
..... ........+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 10000 00001245799999999999999999999999999999999999999
Q ss_pred CCCchhhhhHHHHHHHHhhc--cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceec
Q 014544 213 WQGLKAATKKQKYDKICEKK--VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 290 (423)
Q Consensus 213 f~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw 290 (423)
|.+.... ..+..+.... ...+.. ..+++++.++|.+|+ .||.+|++...+.+. ..+.|....+|
T Consensus 236 f~~~~~~---~~~~~i~~~~~~~~~p~~---~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei-------~~hp~f~~~~~ 301 (360)
T cd05627 236 FCSETPQ---ETYRKVMNWKETLVFPPE---VPISEKAKDLILRFC-TDSENRIGSNGVEEI-------KSHPFFEGVDW 301 (360)
T ss_pred CCCCCHH---HHHHHHHcCCCceecCCC---CCCCHHHHHHHHHhc-cChhhcCCCCCHHHH-------hcCCCCCCCCH
Confidence 9875443 3333333221 111211 124788999999977 499999975333222 23456666788
Q ss_pred eec
Q 014544 291 TIL 293 (423)
Q Consensus 291 ~~~ 293 (423)
..+
T Consensus 302 ~~~ 304 (360)
T cd05627 302 GHI 304 (360)
T ss_pred HHH
Confidence 654
No 124
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.8e-40 Score=337.25 Aligned_cols=250 Identities=20% Similarity=0.216 Sum_probs=202.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC-CceEEEEEecCCCCc--hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT-NEIVAVKIENSGTKH--PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~-~~~vaiKi~~~~~~~--~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
...|.+.+.||+|+||.||+|....+ ++.||+|.+...... ..+..|+.++..++| ++++.+..++...+..||||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~H-pniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDH-FGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCC-CCEeEEEEEEEECCEEEEEE
Confidence 34599999999999999999998877 778999976543322 246779999999976 56777777778889999999
Q ss_pred ecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 83 DLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 83 e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.+..
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCceecCC
Confidence 999 89999887532 3458999999999999999999999999999999999999 4788999999999987654
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.... +.+..+.......
T Consensus 222 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~---~~~~~~~~~~~~~--- 290 (478)
T PTZ00267 222 SVSL-----DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR---EIMQQVLYGKYDP--- 290 (478)
T ss_pred cccc-----ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCCCC---
Confidence 3211 1223567999999999999999999999999999999999999999864432 3333333332221
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....++.++.++|..||..+|++||++++++.
T Consensus 291 -~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 -FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 12345789999999999999999999998864
No 125
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.8e-40 Score=328.65 Aligned_cols=259 Identities=20% Similarity=0.253 Sum_probs=198.0
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-----ee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE-----DN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~-----~~ 78 (423)
+|++.+.||+|+||.||+|.+..+++.||||.+.... ....+.+|+++++.++|++ +..+..+..... ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN-VLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCC-cCCHhheecCCCccccceE
Confidence 4789999999999999999999999999999875432 2245788999999998755 444444443333 68
Q ss_pred EEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 79 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
++||||++++|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 80 ~lv~e~~~~~l~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 80 YVVTELMQSDLHKIIVS-PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEEeeccccCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeeccc
Confidence 99999999899887754 4579999999999999999999999999999999999999 4788999999999987543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh-------
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE------- 230 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~------- 230 (423)
.... ......++..|+|||.+.+.. ++.++|||||||++|||++|+.||.+.+.......+.....
T Consensus 156 ~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~ 229 (372)
T cd07853 156 DESK------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAM 229 (372)
T ss_pred Cccc------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence 3221 112346789999999998754 78999999999999999999999987654432222211111
Q ss_pred -------------hccCCc-hH---HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 231 -------------KKVSTP-IE---VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 231 -------------~~~~~~-~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.....+ .. ......++++.+||.+||..||.+||++.+++. +.++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~--hp~~~~ 293 (372)
T cd07853 230 RSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA--HPYLDE 293 (372)
T ss_pred HHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc--CHhhCC
Confidence 011111 00 112335788999999999999999999999865 455543
No 126
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.2e-40 Score=309.58 Aligned_cols=255 Identities=24% Similarity=0.342 Sum_probs=202.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||.+.... ....+..|+++++.++| +++..+..++.+.+..+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNH-PNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCC-cceeeeeeeEEECCeEEEE
Confidence 68999999999999999999999999999999765322 12347889999999987 5555666666677889999
Q ss_pred Eecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 82 LDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||+++ .++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccccceecc
Confidence 9999 77998887532 34589999999999999999999999999999999999994 67889999999988764
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
..... .....+++.|+|||.+.+..++.++||||||+++|+|++|..||..... ........+..... .+.
T Consensus 158 ~~~~~-------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~ 228 (267)
T cd08228 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLFSLCQKIEQCDY-PPL 228 (267)
T ss_pred chhHH-------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc-cHHHHHHHHhcCCC-CCC
Confidence 33211 1234688899999999988899999999999999999999999975332 11222222222111 111
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
.....+..+.++|.+||..+|++||++.++++.|+.+
T Consensus 229 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 229 --PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred --ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1123478899999999999999999999999988764
No 127
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-40 Score=325.48 Aligned_cols=253 Identities=21% Similarity=0.305 Sum_probs=195.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEee-----ee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYG-----VD 74 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~-----~~ 74 (423)
.+.++|++.+.||.|+||.||+|.+..+++.||||++.... ....+.+|+++++.++|++.+..+..+. ..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 35679999999999999999999999999999999876532 2234678999999998755444333222 12
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....+++|++++++|.+++. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~ 166 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVK--CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLAR 166 (343)
T ss_pred cCcEEEEeecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCccce
Confidence 24578999999999988775 4569999999999999999999999999999999999999 478899999999998
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc-
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK- 232 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~- 232 (423)
...... ....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+.......
T Consensus 167 ~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (343)
T cd07878 167 QADDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPS 236 (343)
T ss_pred ecCCCc----------CCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 754322 24578999999999987 468999999999999999999999998654332222211111000
Q ss_pred ----------------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 ----------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ----------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
............++.+.+||.+||..||.+||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 237 PEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000011122344667899999999999999999999875
No 128
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.1e-40 Score=314.39 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=204.0
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
-.++|.+.+.||+|+||.||+|.+.. +++.||||++...... ..+.+|+++++.+.| +++..+..++....
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~ 81 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQH-ENIVKFYGVCTEGD 81 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCC-CCchheeeEEecCC
Confidence 35679999999999999999998753 3578999988765433 468899999999987 45666666677778
Q ss_pred eeEEEEecc-CCCHHHHHHHhc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR-------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~-------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
..+++|||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||+ +.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~ 158 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD 158 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence 899999999 899999986532 347889999999999999999999999999999999999 478
Q ss_pred CeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhh
Q 014544 143 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 221 (423)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (423)
+.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.+.....
T Consensus 159 ~~~kl~d~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~- 232 (280)
T cd05049 159 LVVKIGDFGMSRDVYTTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE- 232 (280)
T ss_pred CeEEECCcccceecccCcce-----ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-
Confidence 99999999999765332211 11223456788999999999999999999999999999998 999998654432
Q ss_pred HHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 222 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
....+.......+ ...+|..+.+++.+||..||++||++.+|++.|+
T Consensus 233 --~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 233 --VIECITQGRLLQR----PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --HHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 2333332222221 1345889999999999999999999999998875
No 129
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.6e-40 Score=309.69 Aligned_cols=255 Identities=23% Similarity=0.374 Sum_probs=202.5
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+..++|++.++||+|+||.||+|++..+. .||+|++..... ...+.+|+.+++.+.| +++..+..+. .....++||
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~~-~~i~~~~~~~-~~~~~~lv~ 79 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLRH-EKLVQLYAVV-SEEPIYIVT 79 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCCC-CCcceEEEEE-CCCCcEEEE
Confidence 45688999999999999999999986654 599998875433 4568899999999986 4455554443 345679999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..++.++.|++.||+|||+.|++||||||+||+++ +++.++|+|||+++.+....
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCceeeccccc
Confidence 999 78999998753 34589999999999999999999999999999999999994 78899999999998764332
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||...+..++.++|||||||++|+|++ |..||.+.... +.+..+.. ....+.
T Consensus 157 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~~~~~-~~~~~~-- 224 (262)
T cd05071 157 YT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLDQVER-GYRMPC-- 224 (262)
T ss_pred cc------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHHHHhc-CCCCCC--
Confidence 11 1123356778999999998889999999999999999999 89999765433 22222222 111121
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
...+|..+.+++.+||+.+|++||+++++.+.|+++|
T Consensus 225 -~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 225 -PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred -ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 2345889999999999999999999999999999876
No 130
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-40 Score=316.27 Aligned_cols=263 Identities=20% Similarity=0.311 Sum_probs=207.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC-------CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-------TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~-------~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
+..++|.+.+.||+|+||.||+|++.. +...||+|++..... ...+..|+.++..+..++++..+..++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 345789999999999999999998743 234699998875432 2347789999999966677888877777
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEe
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 137 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~ 137 (423)
.....++||||+ +++|.+++.... ..+++.+++.++.||+.||+|||++|++||||||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill- 173 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV- 173 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE-
Confidence 888999999999 789999987532 248899999999999999999999999999999999999
Q ss_pred ccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCc
Q 014544 138 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 216 (423)
Q Consensus 138 ~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~ 216 (423)
+.++.+||+|||+++......... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.
T Consensus 174 --~~~~~~kL~dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~ 246 (307)
T cd05098 174 --TEDNVMKIADFGLARDIHHIDYYK-----KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 246 (307)
T ss_pred --cCCCcEEECCCcccccccccchhh-----ccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcC
Confidence 477899999999987654322111 1112234578999999999889999999999999999998 89999764
Q ss_pred hhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 217 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
... +....+ ....... .....+.++.+++.+||..+|++||++.+|++.|++++...+
T Consensus 247 ~~~---~~~~~~-~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~ 304 (307)
T cd05098 247 PVE---ELFKLL-KEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS 304 (307)
T ss_pred CHH---HHHHHH-HcCCCCC---CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence 332 222222 2221111 223458899999999999999999999999999999987643
No 131
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-40 Score=328.50 Aligned_cols=251 Identities=21% Similarity=0.276 Sum_probs=198.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+.+++.+.| +++..+..+..+....+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~h-p~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCC-CCEeeEEEEEEcCCEEE
Confidence 4578999999999999999999999999999999875421 22346788888888876 56666667777888999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+|.....
T Consensus 120 lv~Ey~~gg~L~~~l~~--~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 120 MVMEYMPGGDLVNLMSN--YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceeccc
Confidence 999999 8999998864 468999999999999999999999999999999999999 5789999999999987643
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
.... ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.... ..+..+......
T Consensus 195 ~~~~------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~---~~~~~i~~~~~~ 265 (370)
T cd05621 195 TGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV---GTYSKIMDHKNS 265 (370)
T ss_pred CCce------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH---HHHHHHHhCCcc
Confidence 2211 112557999999999997643 788999999999999999999999875432 334444433221
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCC--CCChHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQ--RPDYGFLKR 271 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~~l~~ 271 (423)
...+. ...++..+++++..||..++.+ |++++++++
T Consensus 266 ~~~p~-~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 266 LNFPE-DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred cCCCC-cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 11111 1235788999999999855543 889888866
No 132
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4e-41 Score=326.13 Aligned_cols=237 Identities=24% Similarity=0.358 Sum_probs=193.7
Q ss_pred eceeeecCceeEEEEEEc---CCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
++.||+|+||.||++++. .+++.||+|++.... ....+..|++++..+.| +++..+..++......|+||||
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNH-PFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCC-CCcccEEEEEEcCCEEEEEEcC
Confidence 367999999999999864 578899999886432 23346789999999986 5566676777788899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 80 LRGGDLFTRLSK-EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred CCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCC--
Confidence 9 8899888864 4569999999999999999999999999999999999999 4788999999999876543321
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||.+.... +.+..+.......+ ..
T Consensus 154 -----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~~~i~~~~~~~p-----~~ 220 (318)
T cd05582 154 -----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK---ETMTMILKAKLGMP-----QF 220 (318)
T ss_pred -----ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH---HHHHHHHcCCCCCC-----CC
Confidence 122457899999999999988999999999999999999999999865432 33444444443332 34
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGF 268 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~ 268 (423)
+++.+.++|..||+.||++||++.+
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 5889999999999999999999776
No 133
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=301.89 Aligned_cols=265 Identities=21% Similarity=0.228 Sum_probs=223.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC------C----chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT------K----HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~------~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
-.+|.-.+.||.|..+.|-++.++.+++.+|+|++.... . .+....|+.+|+++.+|++|..+..+....
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 357888899999999999999999999999999765321 1 123567999999999999999999988889
Q ss_pred CeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
...++|+|+| .|.|.|++.. .-.++++....|++|+.+|++|||.++||||||||+|||+ |++.++||+|||+|+
T Consensus 96 sF~FlVFdl~prGELFDyLts-~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGFa~ 171 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTS-KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGFAC 171 (411)
T ss_pred chhhhhhhhcccchHHHHhhh-heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccceee
Confidence 9999999999 8999999975 3469999999999999999999999999999999999999 688999999999999
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCC------CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI------EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (423)
.+...... ...+|||.|+|||.+... .|+...|+||+|+|||-|+.|.+||..-+ ..-.+..|
T Consensus 172 ~l~~GekL--------relCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk---QmlMLR~I 240 (411)
T KOG0599|consen 172 QLEPGEKL--------RELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK---QMLMLRMI 240 (411)
T ss_pred ccCCchhH--------HHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH---HHHHHHHH
Confidence 88765432 378999999999998742 47889999999999999999999998643 23456678
Q ss_pred HhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH--HHHHHHHhcCCCCCc
Q 014544 229 CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR--LFHDLFSREGYDFDF 286 (423)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~--~L~~~~~~~~~~~~~ 286 (423)
+++++.+..+. +..++...++||.+||+.||.+|.|+++.+. .|.++.......+..
T Consensus 241 meGkyqF~spe-Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP 299 (411)
T KOG0599|consen 241 MEGKYQFRSPE-WADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSP 299 (411)
T ss_pred HhcccccCCcc-hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCC
Confidence 88888776554 4677889999999999999999999999876 455555555544443
No 134
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=5.3e-40 Score=313.27 Aligned_cols=244 Identities=22% Similarity=0.302 Sum_probs=194.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|+..+.||+|+||+||+|.+..+++.||+|++.... ....+.+|+++++.++| +++..+..++...+..+++|
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNS-QFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCC-cCceeEEEEEecCCEEEEEE
Confidence 4788999999999999999999999999999876432 12346789999999977 45555666666778899999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||++ ++.+.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCC
Confidence 999 78888877643 3469999999999999999999999999999999999999 467899999999997654322
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....|+..|+|||.+.+..++.++|||||||++|+|++|..||.+.......+.+... ........
T Consensus 157 ~--------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~----~~~~~~~~ 224 (285)
T cd05632 157 S--------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR----VLETEEVY 224 (285)
T ss_pred c--------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh----hhcccccc
Confidence 1 12457899999999999989999999999999999999999999875433222222111 11111122
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~ 267 (423)
...++.++.+|+..||+.||++||++.
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~ 251 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQ 251 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCc
Confidence 345688999999999999999999943
No 135
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.4e-40 Score=316.66 Aligned_cols=260 Identities=19% Similarity=0.229 Sum_probs=205.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCce--EEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEI--VAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~--vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+--++|++.+.||+|+||.||+|.+..++.. +++|.+.... ....+.+|++++..+.+|++++.+..++......
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 3346899999999999999999998877754 5677655322 2235778999999997678888888888888899
Q ss_pred EEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 79 VLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCC
Confidence 9999999 889999986432 257899999999999999999999999999999999999 478
Q ss_pred CeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhh
Q 014544 143 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 221 (423)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (423)
+.+||+|||++....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.....
T Consensus 161 ~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~- 231 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE- 231 (303)
T ss_pred CcEEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH-
Confidence 899999999986422111 1112234668999999988889999999999999999998 999998654432
Q ss_pred HHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 222 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
....+. ...... .....++.+.+|+.+||+.+|++||++++++..|..++....
T Consensus 232 --~~~~~~-~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 232 --LYEKLP-QGYRLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred --HHHHHh-cCCcCC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 222221 111111 112357899999999999999999999999999998876554
No 136
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.5e-40 Score=308.97 Aligned_cols=250 Identities=27% Similarity=0.438 Sum_probs=201.4
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchh----HHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ----LLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~----~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
|++++.||+|+||.||+|.+..+++.||+|++........ ..+|+.+++.+.| +++..+..+.......+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRH-PNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTB-TTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccc-cccccccccccccccccccccc
Confidence 8999999999999999999999999999999887654333 3458999999954 6677777777788999999999
Q ss_pred cCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 LGP-SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~~~-sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+.+ +|.+++. ....+++..++.++.||+.||.+||++||+|+||||+|||+ +.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~-- 153 (260)
T PF00069_consen 80 CPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNE-- 153 (260)
T ss_dssp ETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTS--
T ss_pred ccccccccccc-ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccc--
Confidence 955 9999988 35679999999999999999999999999999999999999 5889999999999986522111
Q ss_pred cccccCCCCcccccCccccchhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||++. +..++.++||||||+++|+|++|..||...........+.+........... ...
T Consensus 154 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 227 (260)
T PF00069_consen 154 -----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ-QSR 227 (260)
T ss_dssp -----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-SHT
T ss_pred -----ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-ccc
Confidence 123567899999999998 8889999999999999999999999999763333333333332221111110 001
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+.++.++|..||+.||++||++.++++
T Consensus 228 ~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 228 EKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp TSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12479999999999999999999998865
No 137
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6e-40 Score=313.23 Aligned_cols=261 Identities=23% Similarity=0.326 Sum_probs=208.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
|-..+|.+.+.||+|+||.||+|.+. .++..||+|.+..... ...+.+|+.++..+.| +++..+..++....
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~ 80 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQH-EHIVKFYGVCVEGD 80 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCC-CCcceEEEEEecCC
Confidence 44678999999999999999999863 3456699998765432 3358899999999986 66777777777888
Q ss_pred eeEEEEecc-CCCHHHHHHHhc------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN 143 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~ 143 (423)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||+ ++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence 999999999 889999886432 248999999999999999999999999999999999999 4788
Q ss_pred eEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhH
Q 014544 144 QVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKK 222 (423)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~ 222 (423)
.++|+|||+++........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||......
T Consensus 158 ~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--- 229 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--- 229 (288)
T ss_pred cEEeccCCccccccCCcee-----ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999865432211 11223445788999999999889999999999999999998 99999875433
Q ss_pred HHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 223 QKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 223 ~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
..+..+....... .....+.++.+|+.+||+.||.+||++.++...|+++.+..
T Consensus 230 ~~~~~i~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 230 EVIECITQGRVLQ----RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred HHHHHHHcCCcCC----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 2333333332211 12345889999999999999999999999999999987653
No 138
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8.5e-40 Score=308.26 Aligned_cols=255 Identities=16% Similarity=0.280 Sum_probs=204.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC---CceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
.++|++.+.||+|+||.||+|.+... ...||||++...... ..+.+|+.++..++| +++..+..+.......+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDH-PNIIRLEGVVTKSRPVM 81 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCC-CCcceEeEEEecCCceE
Confidence 46899999999999999999998643 457999987654332 347889999999986 56666766667778899
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
++|||+ +++|.+++......+++..++.++.|++.||.|||++||+||||||+|||+ +.++.++|+|||+++....
T Consensus 82 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 82 IITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhcccc
Confidence 999999 889999987766679999999999999999999999999999999999999 4788999999999987752
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
..... ......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... +....+.. ....+.
T Consensus 159 ~~~~~-----~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~~-~~~~~~ 229 (266)
T cd05033 159 SEATY-----TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAVED-GYRLPP 229 (266)
T ss_pred cccce-----eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHHHc-CCCCCC
Confidence 22111 1112345678999999998889999999999999999998 99999765433 22222222 122222
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
. ...|..+.+++.+||+.+|++||++++|++.|+++
T Consensus 230 ~---~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 230 P---MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred C---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 34588999999999999999999999999999875
No 139
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.1e-40 Score=326.64 Aligned_cols=251 Identities=23% Similarity=0.310 Sum_probs=197.7
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+|+.+++.+.| +++..+..........
T Consensus 40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~h-p~iv~~~~~~~~~~~~ 118 (371)
T cd05622 40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-PWVVQLFYAFQDDRYL 118 (371)
T ss_pred cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCC-CCCCeEEEEEEcCCEE
Confidence 44689999999999999999999999999999999875321 22336678888888766 6666776777788899
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
++||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++...
T Consensus 119 ~lv~Ey~~gg~L~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~ 193 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSN--YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMN 193 (371)
T ss_pred EEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcC
Confidence 9999999 8899998864 458999999999999999999999999999999999999 478899999999998764
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
..... ......||+.|+|||++.+.. ++.++|||||||++|||++|..||.+.+.. ..+.++.....
T Consensus 194 ~~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~---~~~~~i~~~~~ 264 (371)
T cd05622 194 KEGMV------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV---GTYSKIMNHKN 264 (371)
T ss_pred cCCcc------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCC
Confidence 33211 122557999999999997643 789999999999999999999999874432 34444443322
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCC---CCChHHHHH
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQ---RPDYGFLKR 271 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~---RPt~~~l~~ 271 (423)
....+. ...++..++++|..||. +|.. |+++++|++
T Consensus 265 ~~~~~~-~~~~s~~~~~li~~~L~-~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 265 SLTFPD-DNDISKEAKNLICAFLT-DREVRLGRNGVEEIKR 303 (371)
T ss_pred cccCCC-cCCCCHHHHHHHHHHcC-ChhhhcCCCCHHHHhc
Confidence 211111 13468899999999998 4544 667777755
No 140
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.7e-40 Score=307.20 Aligned_cols=249 Identities=19% Similarity=0.263 Sum_probs=199.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
.+|++.+.||+|+||.||+|.+.. +..+|+|.+.... ....+.+|+.+++.++| +++..+..++......+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRA-QIKVAIKAINEGAMSEEDFIEEAKVMMKLSH-PKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEecc-CceEEEEecccCCccHHHHHHHHHHHHHCCC-CCceeEEEEEccCCCEEEEEEcC
Confidence 579999999999999999998764 4579999876543 34568899999999986 55666666677778899999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+++......+++..++.++.|++.||+|||++||+||||||+||++ ++++.+||+|||+++........
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~~~-- 156 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDEYT-- 156 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCcee--
Confidence 889999887655678999999999999999999999999999999999999 47889999999998765432211
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
......++..|+|||.+.+..++.++||||||+++|+|++ |+.||...... +.+..+..... ... ...
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i~~~~~-~~~---~~~ 225 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMISRGFR-LYR---PKL 225 (256)
T ss_pred ----ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHCCCC-CCC---CCC
Confidence 1113345678999999998889999999999999999999 99999865433 22333322211 111 123
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.+..+.+++.+||..+|++||++++|++.|
T Consensus 226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 226 ASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 478899999999999999999999998865
No 141
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=330.83 Aligned_cols=243 Identities=22% Similarity=0.314 Sum_probs=206.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|.-++.||.|+||.||-|++..+.+.||||.+.... ..+.+++|++.|+.|.| ++...+..|+......|+||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~H-PntieYkgCyLre~TaWLVM 105 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRH-PNTIEYKGCYLREHTAWLVM 105 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccC-CCcccccceeeccchHHHHH
Confidence 3566788999999999999999999999999876543 34568999999999998 45556777777888899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|||-|+-.|++.-.++++.+.++..|+.+.+.||.|||+.+.||||||..|||++ +.+.|||+|||.|.....
T Consensus 106 EYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 106 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS---EPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred HHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec---CCCeeeeccccchhhcCc----
Confidence 9999999999988888999999999999999999999999999999999999995 899999999999876543
Q ss_pred CcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 163 RHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
...++|||.|||||++. .+.|+-++|||||||++.||...++|+..+++.....- |....-+...
T Consensus 179 -------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH---IAQNesPtLq-- 246 (948)
T KOG0577|consen 179 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNESPTLQ-- 246 (948)
T ss_pred -------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH---HHhcCCCCCC--
Confidence 23789999999999987 34589999999999999999999999998877643322 3222222111
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...++..|+.|+..||.+-|.+||+.+++++
T Consensus 247 -s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 247 -SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 2445889999999999999999999998865
No 142
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-39 Score=315.46 Aligned_cols=256 Identities=18% Similarity=0.215 Sum_probs=189.8
Q ss_pred eceeeecCceeEEEEEEc--CCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEee-eeCCeeEEEEeccCCC
Q 014544 12 GRKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYG-VDGEDNVLVLDLLGPS 88 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~--~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~-~~~~~~~lv~e~~~~s 88 (423)
+++||+|+||+||+|+++ .+++.||+|.+........+.+|+.+++.++|++.+..+..+. ......+++|||++++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD 85 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence 568999999999999976 3678899999877666667889999999998865555444443 2345689999999999
Q ss_pred HHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc-CCCCeEEEeeccceeeccCC
Q 014544 89 LEDLFVYCR--------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG-RKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 89 L~~~l~~~~--------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~-~~~~~vkL~DFGla~~~~~~ 159 (423)
|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+++.....
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07868 86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCC
Confidence 998876421 248899999999999999999999999999999999999532 34578999999999876543
Q ss_pred CCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhh------hHHHHHHHHhhc
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT------KKQKYDKICEKK 232 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~------~~~~~~~i~~~~ 232 (423)
... ........||+.|+|||++.+. .++.++|||||||++|+|++|+.||....... ....+..+....
T Consensus 166 ~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07868 166 LKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 241 (317)
T ss_pred Ccc----ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence 211 1122356789999999999874 58999999999999999999999997532110 001111111100
Q ss_pred cCCc---------------------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VSTP---------------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~~---------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.... .+......+..+.+||.+||..||.+|||++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000 00000112456889999999999999999999865
No 143
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.1e-40 Score=324.20 Aligned_cols=236 Identities=24% Similarity=0.294 Sum_probs=188.5
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHH-HHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKV-YKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~-l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||+||+|++..+++.||||++.... ....+..|..+ ++.+.| +++..+..++...+..++||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-p~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKH-PFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCC-CCCccEEEEEecCCEEEEEEcCCC
Confidence 46999999999999999999999999876432 22334555554 444554 66777777777888999999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|...+.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~---- 151 (325)
T cd05604 80 GGELFFHLQR-ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSD---- 151 (325)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCC----
Confidence 7888877764 5679999999999999999999999999999999999999 4788999999999875332211
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.. +.+..+.......+ ...+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~---~~~~~~~~~~~~~~-----~~~~ 220 (325)
T cd05604 152 ---TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA---EMYDNILHKPLVLR-----PGAS 220 (325)
T ss_pred ---CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH---HHHHHHHcCCccCC-----CCCC
Confidence 122557999999999999999999999999999999999999999865432 33344443332222 3457
Q ss_pred HHHHHHHHHHHcCCCCCCCChHH
Q 014544 246 AEFASYFHYCQSLTFDQRPDYGF 268 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~~ 268 (423)
..+.++|.+||..+|.+||++.+
T Consensus 221 ~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 221 LTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHHHhccCHHhcCCCCC
Confidence 88999999999999999998753
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.6e-40 Score=322.11 Aligned_cols=260 Identities=22% Similarity=0.324 Sum_probs=201.9
Q ss_pred cCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEE-eeeeCC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKW-YGVDGE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~-~~~~~~ 76 (423)
.++|++.+.||+|+||.||+|.+. .+++.||||+++.... ...+.+|+.++..+.+++++..+.. +.....
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 468999999999999999999853 4577899999875433 2347789999999977666666644 444556
Q ss_pred eeEEEEecc-CCCHHHHHHHhc----------------------------------------------------------
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR---------------------------------------------------------- 97 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~---------------------------------------------------------- 97 (423)
..+++|||+ +++|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 789999999 899999886421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccC
Q 014544 98 --------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRE 169 (423)
Q Consensus 98 --------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (423)
..+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++........ ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~-----~~ 237 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDY-----VR 237 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcch-----hh
Confidence 236788889999999999999999999999999999999 47889999999999865332211 11
Q ss_pred CCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHH
Q 014544 170 NKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEF 248 (423)
Q Consensus 170 ~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 248 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++ |..||....... . ...........+.+ ...++++
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~-~~~~~~~~~~~~~~---~~~~~~~ 311 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E-FCRRLKEGTRMRAP---DYTTPEM 311 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH--H-HHHHHhccCCCCCC---CCCCHHH
Confidence 123345678999999999899999999999999999997 999997643321 1 11111111111111 2347789
Q ss_pred HHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 249 ASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 249 ~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.+++..||+.+|++||++.+|++.|+.++..
T Consensus 312 ~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 312 YQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998764
No 145
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-39 Score=306.51 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=204.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+..++|++.+.||+|+||.||+|.+.. ++.||||.+.... ....+.+|+.+++.++| +++..+..++......+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~-~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNN-TTPVAVKTLKPGTMDPKDFLAEAQIMKKLRH-PKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecC-CeEEEEEeeCCCcccHHHHHHHHHHHHHCCC-CCccceeEEEecCCCeeeee
Confidence 456889999999999999999998754 5679999876543 34568899999999986 55666766777788899999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++ .++.++|+|||+++......
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKEDI 157 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEEEccCCc
Confidence 999 899999987543 4689999999999999999999999999999999999994 78899999999998875332
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
... ......+..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.... ..+..+. .....+.
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~-~~~~~~~-- 225 (261)
T cd05068 158 YEA------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA---EVLQQVD-QGYRMPC-- 225 (261)
T ss_pred ccc------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHH-cCCCCCC--
Confidence 111 112233468999999999889999999999999999999 99999875433 2222222 2222221
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
....+..+.+++.+||+.+|++||++++|...|++
T Consensus 226 -~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 -PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 13458899999999999999999999999999875
No 146
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2e-40 Score=321.72 Aligned_cols=235 Identities=26% Similarity=0.342 Sum_probs=188.4
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHH-HHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAK-VYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~-~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||.||+|++..+++.||+|++.... ....+..|.. +++.+.| +++..+..++.+.+..++||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h-~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKH-PFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCC-CCccceeeEEEcCCEEEEEEcCCC
Confidence 47999999999999999999999999876432 2223455554 4555655 66667777777888999999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|...+.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 80 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~---- 151 (321)
T cd05603 80 GGELFFHLQR-ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEE---- 151 (321)
T ss_pred CCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCC----
Confidence 7888877764 5678999999999999999999999999999999999999 5788999999999875432221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+..++.++|||||||++|||++|..||.+.+. .+.+..+.......+ ...+
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~~~~~~~-----~~~~ 220 (321)
T cd05603 152 ---TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV---SQMYDNILHKPLQLP-----GGKT 220 (321)
T ss_pred ---ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH---HHHHHHHhcCCCCCC-----CCCC
Confidence 12245789999999999998999999999999999999999999987543 234444444433333 3457
Q ss_pred HHHHHHHHHHHcCCCCCCCChH
Q 014544 246 AEFASYFHYCQSLTFDQRPDYG 267 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~ 267 (423)
..+.++|..||+.+|.+||++.
T Consensus 221 ~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 221 VAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHHHccCCHhhcCCCC
Confidence 8899999999999999999864
No 147
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=4.6e-40 Score=312.46 Aligned_cols=240 Identities=20% Similarity=0.259 Sum_probs=190.4
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||+|+||.||++++..+++.||+|.+.... ....+..|+++++.+.| +++..+..++......++||||+ +++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~h-p~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNS-PFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCC-CcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999875422 22345679999999976 55666666667788899999999 889
Q ss_pred HHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 89 LEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 89 L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.++|+|||++........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~------ 150 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKT------ 150 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCce------
Confidence 98887543 3358999999999999999999999999999999999999 4788999999999987654321
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-hhHHHHHHHHhhccCCchHHhhccChH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-TKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ...+............ ....++.
T Consensus 151 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 224 (277)
T cd05607 151 --ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF----EHQNFTE 224 (277)
T ss_pred --eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc----ccccCCH
Confidence 11346899999999999988999999999999999999999999764322 1112222222222111 1235688
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGFLK 270 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~l~ 270 (423)
++.++|.+||+.||++||++.++.
T Consensus 225 ~~~~li~~~L~~~P~~R~~~~~~~ 248 (277)
T cd05607 225 ESKDICRLFLAKKPEDRLGSREKN 248 (277)
T ss_pred HHHHHHHHHhccCHhhCCCCccch
Confidence 999999999999999999997764
No 148
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.1e-40 Score=308.76 Aligned_cols=254 Identities=22% Similarity=0.358 Sum_probs=203.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
|-.++|++.++||+|+||.||+|.+. ++..||+|.+.... ..+.+.+|+.+++.++| +++..+..+.......+++|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQH-DKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCC-CCeeeEEEEEcCCCCcEEEE
Confidence 44578999999999999999999865 45679999876533 34568899999999986 45555666666778899999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..++.++.|++.||+|||+.+++||||||+||++ +..+.++|+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCCCc
Confidence 999 88999988653 3568999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+.. ....+.
T Consensus 158 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~-~~~~~~-- 225 (261)
T cd05072 158 YT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSALQR-GYRMPR-- 225 (261)
T ss_pred ee------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHHHc-CCCCCC--
Confidence 11 1113345678999999998889999999999999999998 999998654332 2222222 222221
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
...+|.++.+++.+||..+|++||++++|.+.|++
T Consensus 226 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 -MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 13458899999999999999999999999999875
No 149
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=9e-40 Score=305.47 Aligned_cols=246 Identities=21% Similarity=0.331 Sum_probs=195.1
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
+.||+|+||.||+|++..+++.||+|....... ...+.+|+++++.+.| +++..+..++......++||||+ +++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSH-PNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCC-CCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 479999999999999998999999998664332 3458899999999976 55666766777788899999999 889
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++......+++..++.++.|++.||.|||++||+||||||+|||+ +.++.+||+|||++..........
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~----- 151 (252)
T cd05084 80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYAS----- 151 (252)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccc-----
Confidence 999887655568999999999999999999999999999999999999 477889999999987644321110
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
.......+..|+|||.+.+..++.++|||||||++|||++ |..||.......... ........+. ....|..
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~ 224 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE----AIEQGVRLPC---PELCPDA 224 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH----HHHcCCCCCC---cccCCHH
Confidence 0111123457999999998889999999999999999998 999997654332211 1122222221 2345889
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+.+++.+||..+|++||++.+|.+.|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999988775
No 150
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=6.2e-40 Score=311.26 Aligned_cols=258 Identities=20% Similarity=0.292 Sum_probs=202.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+-.++|++.+.||+|+||.||+|.+.. ++..||+|....... ...+.+|+.+++.++| +++..+..++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~ 81 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNH-QNIVRLIGVSFER 81 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEccC
Confidence 456789999999999999999999976 678899998764432 2347889999999986 4666666666777
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEe
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
...+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||+++++||||||+|||++.......+||+
T Consensus 82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence 7889999999 899999987543 248999999999999999999999999999999999999633334579999
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 227 (423)
|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||.+..... ....
T Consensus 162 dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~---~~~~ 233 (277)
T cd05036 162 DFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE---VMEF 233 (277)
T ss_pred cCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHH
Confidence 99999876332211 01112234568999999998899999999999999999997 999998754332 2222
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+... ... .....+|..+.+++.+||+.+|++||++.+|++.|.
T Consensus 234 ~~~~-~~~---~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGG-GRL---DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcC-CcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 2211 111 122456889999999999999999999999998875
No 151
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-39 Score=313.76 Aligned_cols=259 Identities=21% Similarity=0.308 Sum_probs=205.1
Q ss_pred cccCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+..++|.+.+.||+|+||.||+|.+. .++..||||+++.... .+.+.+|+.+++.+.+|+++..+..++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 34568999999999999999999863 3455799998765432 234788999999996567777777777788
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
+..+++|||+ +++|.+++.... ..+++.+++.++.||+.||.|||+++|+|+||||+|||+ +..+.++|+|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCccc
Confidence 8899999999 789999987533 238999999999999999999999999999999999999 47789999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+......... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... .+.+.....
T Consensus 189 ~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~---~~~~~~~~~ 260 (302)
T cd05055 189 RDIMNDSNYV-----VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS---KFYKLIKEG 260 (302)
T ss_pred ccccCCCcee-----ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH---HHHHHHHcC
Confidence 8654332110 1123356788999999999899999999999999999998 999998654322 122222222
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
.... .....++++.+++.+||..+|++||++.+|++.|.++
T Consensus 261 ~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 YRMA---QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CcCC---CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 2211 1234578999999999999999999999999999875
No 152
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=347.46 Aligned_cols=259 Identities=20% Similarity=0.309 Sum_probs=212.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCc-----eEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNE-----IVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~-----~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
....++.+.||+|.||+||.|....... .||||.++..... .+|.+|+.+|..+.|++ |..+.....+...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpN-iv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPN-IVSLIGVCLDSGP 769 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcc-eeeEEEeecCCCC
Confidence 4567889999999999999999874322 3999987766543 35899999999999855 4455455555888
Q ss_pred eEEEEecc-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYC------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 150 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DF 150 (423)
.+|++||| +|+|..++... ...++..+.+.++.|||.|++||+++++|||||..+|+|++ ....|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD---ERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec---ccCcEEEccc
Confidence 99999999 99999999987 56799999999999999999999999999999999999994 7799999999
Q ss_pred cceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHH
Q 014544 151 GLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKIC 229 (423)
Q Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~ 229 (423)
|+|+.+..... |+......-..+|||||.+....++.|+|||||||+|||+++ |..||.+.+..+....+ ..
T Consensus 847 GlArDiy~~~y-----yr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~--~~ 919 (1025)
T KOG1095|consen 847 GLARDIYDKDY-----YRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDV--LE 919 (1025)
T ss_pred chhHhhhhchh-----eeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHH--Hh
Confidence 99995544433 223333344579999999999999999999999999999999 99999987665433322 22
Q ss_pred hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 230 EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
+.++..| ..+|+.+.++|.+||+.+|++||+|..|++.+..++...
T Consensus 920 ggRL~~P-----~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 920 GGRLDPP-----SYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred CCccCCC-----CCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 3344444 345999999999999999999999999999888877643
No 153
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=5.8e-40 Score=311.37 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=200.5
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+..++|++.+.||+|+||.||+|.+.. ++..||||++..... ...+.+|+.+++.++| +++..+..+....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~-~~iv~~~~~~~~~ 81 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNC-HHVVRLLGVVSQG 81 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCeeeEEEEEcCC
Confidence 567899999999999999999998652 356799998764332 2347789999999876 5566666666777
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeE
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 145 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~v 145 (423)
...++||||+ +++|.+++.... ..+++..++.++.|++.||.|||+.|++||||||+|||++ +++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCCE
Confidence 8899999999 889999886532 2357788999999999999999999999999999999994 78899
Q ss_pred EEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHH
Q 014544 146 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQK 224 (423)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (423)
+|+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... ..
T Consensus 159 ~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~---~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE---QV 230 (277)
T ss_pred EECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HH
Confidence 99999998765433221 11123355788999999999889999999999999999999 79999875432 22
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+..+....... .....+..+.+++.+||+.+|++||++.++++.|+
T Consensus 231 ~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 231 LRFVMEGGLLD----KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHcCCcCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 22222222211 12445889999999999999999999999988775
No 154
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-40 Score=331.78 Aligned_cols=255 Identities=22% Similarity=0.240 Sum_probs=198.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+.+..|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+++++.|+| ++|..+..++......++|||
T Consensus 166 ~~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~H-pnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 166 VAGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSH-PAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCC-CCCCcEEEEEEECCEEEEEEE
Confidence 34668999999999999999999999999999999532 2346789999999987 556666667777888999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
++.++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.........
T Consensus 241 ~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 241 KYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceecccccccc
Confidence 99999999887656679999999999999999999999999999999999999 477899999999998764332111
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-----hhHHHHHHHHhhccC---C
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-----TKKQKYDKICEKKVS---T 235 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-----~~~~~~~~i~~~~~~---~ 235 (423)
......||..|+|||++.+..++.++|||||||+||||++|..|+...... ...+....+...... .
T Consensus 318 -----~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~ 392 (461)
T PHA03211 318 -----FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEF 392 (461)
T ss_pred -----cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccC
Confidence 112457999999999999999999999999999999999987665332110 011111111111100 0
Q ss_pred c--------------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 P--------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~--------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+ .-.....++..+.+||.+||+.||.+||++.+|++
T Consensus 393 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 393 PQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred CCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0 00000133567899999999999999999999976
No 155
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-39 Score=308.82 Aligned_cols=253 Identities=21% Similarity=0.230 Sum_probs=197.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.+.| +++..+..+..++...++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH-PNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCC-CCEeeeEEEEeeCCeEEEEEe
Confidence 5899999999999999999999899999999876432 22457889999999986 666677777778889999999
Q ss_pred ccCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LLGPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~~~sL~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 80 FLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred cCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCCcc
Confidence 99889988886433 568999999999999999999999999999999999999 4788999999999976543221
Q ss_pred CCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh----------
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE---------- 230 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~---------- 230 (423)
......+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.+...............
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (285)
T cd07861 157 -------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV 229 (285)
T ss_pred -------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcc
Confidence 11234668899999998764 478999999999999999999999986443221111111000
Q ss_pred -----------hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 -----------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 -----------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.............+++++.++|.+||..||++||++.+|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 230 TSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000111122346889999999999999999999998865
No 156
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.3e-40 Score=322.92 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=194.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
...|++.+.||+|+||.||+|++..+++.||+|+.... ....|+.+++.++| +++..+..++......++|||++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNH-PSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCC-CCCcChhheEEeCCeeEEEEEcc
Confidence 45799999999999999999999999999999985432 34679999999987 55666666677788899999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
.++|.+++......+++..++.|+.||+.||.|||++||+||||||+|||+ +..+.+||+|||+++.......
T Consensus 140 ~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~~---- 212 (357)
T PHA03209 140 SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAPA---- 212 (357)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCcc----
Confidence 999999988767789999999999999999999999999999999999999 5788999999999875332211
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCC-CCchhh------hhHHHHHHHHhhccCCch-
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPW-QGLKAA------TKKQKYDKICEKKVSTPI- 237 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf-~~~~~~------~~~~~~~~i~~~~~~~~~- 237 (423)
.....||..|+|||++.+..++.++|||||||++|||+++..|+ ...... .....+..+.......+.
T Consensus 213 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 288 (357)
T PHA03209 213 ----FLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEE 288 (357)
T ss_pred ----cccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhh
Confidence 12457899999999999999999999999999999999865554 321110 000111111111000000
Q ss_pred ----------------------------HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 238 ----------------------------EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 238 ----------------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......++..+.+||.+||+.||.+||++.++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 289 FPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred cCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 0001234667888999999999999999999876
No 157
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=9.8e-41 Score=325.06 Aligned_cols=234 Identities=22% Similarity=0.298 Sum_probs=187.5
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
||+|+||+||+|++..+++.||||++.... .......|..++..+. +++++..+...+......++||||+ +
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999875422 1123455666666654 6678888888888888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+.+.. ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~-~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~----- 151 (330)
T cd05586 81 GELFWHLQK-EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNK----- 151 (330)
T ss_pred ChHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCC-----
Confidence 899888764 5679999999999999999999999999999999999999 4788999999999875432221
Q ss_pred ccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 167 YRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+... .+.+..+.......+. ..++
T Consensus 152 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~---~~~~~~i~~~~~~~~~----~~~~ 222 (330)
T cd05586 152 --TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT---QQMYRNIAFGKVRFPK----NVLS 222 (330)
T ss_pred --CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH---HHHHHHHHcCCCCCCC----ccCC
Confidence 12255799999999999765 489999999999999999999999986433 2334444444333332 2357
Q ss_pred HHHHHHHHHHHcCCCCCCCCh
Q 014544 246 AEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~ 266 (423)
+++.++|.+||..||.+||++
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCC
Confidence 899999999999999999954
No 158
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7e-40 Score=313.86 Aligned_cols=260 Identities=19% Similarity=0.296 Sum_probs=199.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCC--------------ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTN--------------EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNI 68 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~--------------~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i 68 (423)
.++|++.+.||+|+||.||+|++..++ ..||+|++..... ...+.+|++++..++| +++..+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h-~~i~~~ 82 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKN-PNIIRL 82 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCC-CCcCeE
Confidence 468999999999999999999875432 3589998875432 2357889999999987 566677
Q ss_pred EEeeeeCCeeEEEEecc-CCCHHHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEE
Q 014544 69 KWYGVDGEDNVLVLDLL-GPSLEDLFVYCR-----------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 136 (423)
Q Consensus 69 ~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~-----------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl 136 (423)
..++......++||||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+|||+
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill 162 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV 162 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence 66777788899999999 889999886421 136888999999999999999999999999999999999
Q ss_pred eccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh--CCCCCC
Q 014544 137 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--GSLPWQ 214 (423)
Q Consensus 137 ~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~ 214 (423)
+ +++.+||+|||++......... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 163 ~---~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~ 234 (295)
T cd05097 163 G---NHYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYS 234 (295)
T ss_pred c---CCCcEEecccccccccccCcce-----eccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCc
Confidence 4 6788999999999765432211 11223345778999999998889999999999999999988 778887
Q ss_pred CchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 215 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
..............................|+.+.+|+.+||..+|++||++++|++.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 235 LLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 654433222221111111110001112345889999999999999999999999998875
No 159
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-39 Score=313.55 Aligned_cols=261 Identities=19% Similarity=0.304 Sum_probs=207.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEc-------CCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV-------DTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~-------~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
+...+|++.+.||+|+||.||+|++. ..+..||+|+..... ....+.+|+.+++.+.+++++..+..+..
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45678999999999999999999853 234579999876532 23458899999999965677877777777
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEe
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 137 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~ 137 (423)
.....+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~ 171 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT 171 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc
Confidence 788899999999 789999987532 2478889999999999999999999999999999999994
Q ss_pred ccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCc
Q 014544 138 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 216 (423)
Q Consensus 138 ~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~ 216 (423)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 172 ---~~~~~kl~D~g~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 172 ---ENNVMKIADFGLARDVNNIDYYK-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred ---CCCcEEECCCccceecccccccc-----cccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 77899999999998764432211 1123345678999999999889999999999999999998 88999765
Q ss_pred hhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 217 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
... +....+... .... ....++..+.+++.+||..+|++||++.+|++.|++++.-
T Consensus 244 ~~~---~~~~~~~~~-~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 PVE---ELFKLLKEG-HRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CHH---HHHHHHHcC-CcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 433 222222221 1111 1234588999999999999999999999999999998764
No 160
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.2e-39 Score=307.95 Aligned_cols=259 Identities=17% Similarity=0.206 Sum_probs=201.0
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCc----eEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~----~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
-.++|++.+.||+|+||+||+|.+..+++ .|++|........ ..+..|+..+..+.|+ ++..+..++. ...
T Consensus 5 ~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~-~iv~~~~~~~-~~~ 82 (279)
T cd05111 5 KETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHA-YIVRLLGICP-GAS 82 (279)
T ss_pred CHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCC-CcceEEEEEC-CCc
Confidence 35789999999999999999999987666 4777776543322 2355666677777764 4555554443 445
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++++||+ +++|.+++......+++..++.++.||+.||.|||++|++||||||+|||+ +.++.+||+|||+++..
T Consensus 83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL 159 (279)
T ss_pred cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence 67889988 899999998766789999999999999999999999999999999999999 47889999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... +..+.......
T Consensus 160 ~~~~~~~-----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~----~~~~~~~~~~~ 230 (279)
T cd05111 160 YPDDKKY-----FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE----VPDLLEKGERL 230 (279)
T ss_pred cCCCccc-----ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH----HHHHHHCCCcC
Confidence 4332111 1123456778999999998889999999999999999998 999998754332 22222322222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
+... ..+..+.+++.+||..+|++||++.++.+.|..+..+.
T Consensus 231 ~~~~---~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 231 AQPQ---ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 2222 23778999999999999999999999999998877543
No 161
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1e-39 Score=311.45 Aligned_cols=248 Identities=20% Similarity=0.270 Sum_probs=195.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|++.+.||+|+||.||+|.+..+++.||||.+..... ...+..|+.+++.++|+. +..+...+.+.+..++||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~-i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF-VVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCC-eeeeeEEEecCCEEEEEE
Confidence 47889999999999999999999999999998754321 234678999999998754 445555556778899999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||++ +..+.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCc
Confidence 999 889988885433 358999999999999999999999999999999999999 478899999999987654322
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||................... ....
T Consensus 157 ~--------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~----~~~~ 224 (285)
T cd05630 157 T--------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV----QEEY 224 (285)
T ss_pred c--------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh----hhhc
Confidence 1 113478999999999999899999999999999999999999998643321112222211111 1122
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCC-----hHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPD-----YGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~~l~~ 271 (423)
...+++++.+|+.+||+.||++||+ ++++++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 225 SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3456889999999999999999999 666654
No 162
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=7.8e-40 Score=313.18 Aligned_cols=260 Identities=19% Similarity=0.298 Sum_probs=200.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCC----------------ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTN----------------EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIP 66 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~----------------~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~ 66 (423)
.++|++.+.||+|+||.||+|.+...+ ..||+|++..... ...+.+|++++..+.| +++.
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSD-PNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCC-CCEe
Confidence 468999999999999999999876533 4589998876542 3457889999999987 4555
Q ss_pred eEEEeeeeCCeeEEEEecc-CCCHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceE
Q 014544 67 NIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 135 (423)
Q Consensus 67 ~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NIL 135 (423)
.+..++......+++||++ +++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil 162 (296)
T cd05051 83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL 162 (296)
T ss_pred EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence 6666666778899999999 789999887543 26899999999999999999999999999999999999
Q ss_pred EeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh--CCCCC
Q 014544 136 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--GSLPW 213 (423)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf 213 (423)
++ ..+.++|+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 163 VG---KNYTIKIADFGMSRNLYSSDYY-----RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred ec---CCCceEEccccceeecccCcce-----eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 94 6789999999999865433211 11224456788999999998889999999999999999998 78888
Q ss_pred CCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 214 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
...............................|.++.+++.+||+.||++||++.+|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 235 EHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 7654332222211111100011111112345789999999999999999999999988775
No 163
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.8e-40 Score=311.83 Aligned_cols=253 Identities=19% Similarity=0.276 Sum_probs=199.9
Q ss_pred CceEEeceeeecCceeEEEEEEc----CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHV----DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~----~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
..|++.+.||+|+||.||+|.+. .++..|++|.+...... ..+.+|+.+++.+.| +++..+..+.......+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHH-PNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCC-CCeeeEEEEEecCCceE
Confidence 57899999999999999999863 35578999987653332 347889999999976 55666666677778899
Q ss_pred EEEecc-CCCHHHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 80 LVLDLL-GPSLEDLFVYCR----------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~----------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||+ +.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---GEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---cCC
Confidence 999999 789999885321 247889999999999999999999999999999999999 477
Q ss_pred CeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhh
Q 014544 143 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATK 221 (423)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~ 221 (423)
+.+||+|||+++......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYR-----VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred CcEEeccccccccccCCccee-----cccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 889999999998764332111 1223455778999999998889999999999999999998 9999987543222
Q ss_pred HHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 222 KQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 222 ~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.+ .+.. ....+ ....+++.+.+++.+||+.+|++||++.+|.+.|..
T Consensus 236 ~~---~~~~-~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IE---MVRK-RQLLP---CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HH---HHHc-CCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22 2222 21111 234568999999999999999999999999988763
No 164
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-43 Score=314.99 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=209.5
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
-|.++++||+|+||.||+|.++.+|+.||||....+...+++.+|+.++++... ++++.++.-......+||||||| .
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S-~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKS-KYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCC-chhhhhhhhhccCCceEeehhhcCC
Confidence 467889999999999999999999999999999888888999999999999886 44555544444667899999999 7
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
|+..+++...++.+++.++..+++..+.||+|||...-||||||..|||+ +.+|..||+|||.|-.+.+...++
T Consensus 113 GSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTMAKR--- 186 (502)
T KOG0574|consen 113 GSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTMAKR--- 186 (502)
T ss_pred CcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhHHhh---
Confidence 99999999888999999999999999999999999999999999999999 589999999999998877655432
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc-cCCchHHhhccCh
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK-VSTPIEVLCKSHP 245 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~ 245 (423)
....||+.|||||++....|+.++||||||++..||..|++||.+..+.. .|.... .++|....+..++
T Consensus 187 ----NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR------AIFMIPT~PPPTF~KPE~WS 256 (502)
T KOG0574|consen 187 ----NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR------AIFMIPTKPPPTFKKPEEWS 256 (502)
T ss_pred ----CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc------eeEeccCCCCCCCCChHhhh
Confidence 37799999999999999999999999999999999999999998765432 111111 1122222223458
Q ss_pred HHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 246 AEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+|.+|++.||.++|++|-++-+|.+
T Consensus 257 ~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 257 SEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 89999999999999999999887755
No 165
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.5e-39 Score=310.85 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=208.2
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCCc--hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH--PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~~--~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
-.++|.+.+.||+|+||.||+|.+.. ++..+++|.+...... ..+.+|+.++..+.| +++..+..++.....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~ 81 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQH-EHIVKFYGVCGDGDP 81 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCC-CCcceEEEEEccCCc
Confidence 35689999999999999999998643 4556899987655432 458899999999976 667777777778888
Q ss_pred eEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
.++||||+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||+ +.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---cc
Confidence 99999999 899999986432 348899999999999999999999999999999999999 47
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhh
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAAT 220 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~ 220 (423)
++.++|+|||++......... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 233 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYY-----RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 233 (291)
T ss_pred CCcEEECCCCcccccCCCcee-----ecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 889999999999765433211 11224456789999999999899999999999999999999 999997654432
Q ss_pred hHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 221 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.+..+....... .....|..+.+++.+||..+|++||++.+|++.|+++.+..
T Consensus 234 ---~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 234 ---VIECITQGRVLE----RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred ---HHHHHhCCCCCC----CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 222232222211 12345889999999999999999999999999999987643
No 166
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-39 Score=310.34 Aligned_cols=258 Identities=24% Similarity=0.317 Sum_probs=196.1
Q ss_pred Cce-EEeceeeecCceeEEEEEE----cCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeee--CC
Q 014544 7 VKY-KLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVD--GE 76 (423)
Q Consensus 7 ~~y-~i~~~Lg~G~fg~Vy~a~~----~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~ 76 (423)
++| ++.+.||+|+||+||++.. ..++..||+|++..... ...+.+|+++++.++|+ ++..+..++.. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~ 81 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHE-NIVKYKGCCSEQGGK 81 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCC-CEeeEEEEEecCCCc
Confidence 455 9999999999999988754 34677899998875432 34578899999999864 45555444332 34
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+++|||+ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.++|+|||+++.
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~--~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~ 156 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPK--HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA 156 (283)
T ss_pred eEEEEecCCCCCCHHHHHHH--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeecccccc
Confidence 578999999 8899998864 4599999999999999999999999999999999999994 778999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh-----------HHH
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-----------KQK 224 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~-----------~~~ 224 (423)
....... +.......++..|+|||.+.+..++.++|||||||++|+|++|..||........ ...
T Consensus 157 ~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 157 VPEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cCCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 6543211 1111233456779999999988899999999999999999999999865321100 000
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
+..........+ ....+|.++.+++.+||+.+|++||++++|++.|+++.
T Consensus 233 ~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLP---CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCC---CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 111111111111 12345889999999999999999999999999998763
No 167
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-39 Score=325.12 Aligned_cols=258 Identities=22% Similarity=0.300 Sum_probs=203.9
Q ss_pred cCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
.++|.+.+.||+|+||.||+|++. .+++.||||+++..... ..+.+|++++..+..|+++..+..++.....
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 457889999999999999999964 34567999998754332 3578899999999855777777777777788
Q ss_pred eEEEEecc-CCCHHHHHHHhc-----------------------------------------------------------
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR----------------------------------------------------------- 97 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~----------------------------------------------------------- 97 (423)
.++||||+ +|+|.+++....
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 99999999 899999886432
Q ss_pred --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc
Q 014544 98 --------------------------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 139 (423)
Q Consensus 98 --------------------------------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~ 139 (423)
..+++..++.++.||+.||.|||+++|+||||||+|||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~-- 273 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC-- 273 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe--
Confidence 1367778899999999999999999999999999999994
Q ss_pred CCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchh
Q 014544 140 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 218 (423)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~ 218 (423)
+.+.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 274 -~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 274 -EGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred -CCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 6789999999999865432211 01123456889999999998889999999999999999998 8999976443
Q ss_pred hhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 219 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
.. ............+. ...++.++.+|+.+||..+|.+||++++|++.|+.++
T Consensus 348 ~~---~~~~~~~~~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NE---QFYNAIKRGYRMAK---PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hH---HHHHHHHcCCCCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 22 12222222222211 1345789999999999999999999999999999875
No 168
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.5e-39 Score=305.13 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=203.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
++|++.+.||.|+||.||+|.+..+++.+++|++.... ....+.+|+.+++.++| +++..+..+.......+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH-PNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC-CChhceEEEEEeCCEEEEEEeC
Confidence 68999999999999999999999889999999877543 34568899999999977 5555666677788899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..+..++.|++.||.|||++||+|+||+|+||++ ++++.++|+|||++........
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~-- 156 (262)
T cd06613 82 CGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIA-- 156 (262)
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhhhh--
Confidence 9 678988887655789999999999999999999999999999999999999 4788999999999876543221
Q ss_pred cccccCCCCcccccCccccchhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||........ ...+....+..+....
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~ 228 (262)
T cd06613 157 -----KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA---LFLISKSNFPPPKLKD 228 (262)
T ss_pred -----ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhccCCCccccc
Confidence 11245788899999999877 789999999999999999999999987543322 2222222222222122
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...++.++.+++.+||..+|.+||++++|+.
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 2345788999999999999999999998864
No 169
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=8e-40 Score=311.23 Aligned_cols=251 Identities=22% Similarity=0.264 Sum_probs=196.9
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|++..+|+.||+|.+..... ...+.+|+.+++.++| +++..+..+..+....++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCC-CCeeeHHHHhccCCceEEEEe
Confidence 58999999999999999999999999999998764322 2357789999999987 455556556667788999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|++++|.+++......+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++.+.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 80 YCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCC--
Confidence 99989999887666779999999999999999999999999999999999999 4788999999999976543221
Q ss_pred cccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC-------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST------- 235 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~------- 235 (423)
......++..|+|||.+.+.. ++.++|||||||++|+|++|..||...... .+.+..+.......
T Consensus 155 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd07839 155 -----CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEESWPG 227 (284)
T ss_pred -----CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH--HHHHHHHHHHhCCCChHHhHH
Confidence 112346788999999987754 789999999999999999999886432221 12222221110000
Q ss_pred -----------------chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 -----------------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 -----------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
........+++++.++|.+||..||.+|||+++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 001122346789999999999999999999998865
No 170
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.4e-39 Score=310.97 Aligned_cols=256 Identities=18% Similarity=0.297 Sum_probs=202.0
Q ss_pred ceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
+|++.+.||+|+||.||+|.+.. ....+++|.+..... ...+.+|+.+++.+.| +++..+..++...+..+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~ 79 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNH-PHVIKLYGACSQDGPLL 79 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCC-CCEeeEEEEEecCCCcE
Confidence 58899999999999999998753 235689998765443 2357889999999987 45555666666778899
Q ss_pred EEEecc-CCCHHHHHHHhc-----------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceE
Q 014544 80 LVLDLL-GPSLEDLFVYCR-----------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 135 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~-----------------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NIL 135 (423)
++|||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+|||
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nil 159 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVL 159 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEE
Confidence 999999 799999876421 24788999999999999999999999999999999999
Q ss_pred EeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCC
Q 014544 136 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQ 214 (423)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~ 214 (423)
+ ++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus 160 l---~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 160 V---AEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred E---cCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 9 47889999999999865432211 11123345678999999998889999999999999999998 999998
Q ss_pred CchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 215 GLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
+..... +..........+. ...++.++.+++..||+.+|++||++.+|++.|++++.+
T Consensus 232 ~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 232 GIAPER----LFNLLKTGYRMER---PENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred CCCHHH----HHHHHhCCCCCCC---CCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 754332 2222222222221 234588999999999999999999999999999998864
No 171
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.6e-39 Score=308.61 Aligned_cols=261 Identities=21% Similarity=0.310 Sum_probs=205.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
+-.++|++.+.||+|+||.||+|.+.. ++..|++|++..... ...+.+|+.+++.+.|.+.+..+..+.....
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 457899999999999999999999875 357899998765433 2347789999999977555554444444567
Q ss_pred eeEEEEecc-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEe
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR-------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
..+++++|+ +++|.+++.... ..+++..++.++.||+.||+|||+++++||||||+||+++ +++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEEC
Confidence 789999999 789999886532 3589999999999999999999999999999999999994 77899999
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 227 (423)
|||+++.+....... ......++..|+|||.+.+..++.++|||||||++||+++ |+.||....... ...
T Consensus 160 d~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~- 230 (280)
T cd05043 160 DNALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE---MAA- 230 (280)
T ss_pred CCCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH---HHH-
Confidence 999998654332111 1113345778999999999889999999999999999999 999998754432 221
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
........+. ...+|+++.+++.+||..+|++||++.++++.|.++.++
T Consensus 231 ~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 231 YLKDGYRLAQ---PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHcCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 2222222221 123588999999999999999999999999999988754
No 172
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=2.3e-39 Score=307.54 Aligned_cols=263 Identities=19% Similarity=0.272 Sum_probs=207.8
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCCCc----eEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~----~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
|..+..++|++.+.||+|+||.||+|.+..++. .||+|....... ...+.+|+.++..+.|+ ++..+..++.
T Consensus 1 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~ 79 (279)
T cd05057 1 LRILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHP-HVVRLLGICL 79 (279)
T ss_pred CcccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCC-CcceEEEEEe
Confidence 345668899999999999999999999876654 589998765543 23577899999999875 4545544444
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
. ...+++|||+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 80 ~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~ 155 (279)
T cd05057 80 S-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGL 155 (279)
T ss_pred c-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcc
Confidence 4 7889999999 899999988766679999999999999999999999999999999999999 4788999999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhh
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
++......... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||.+.......+ .+. .
T Consensus 156 ~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~---~~~-~ 226 (279)
T cd05057 156 AKLLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD---LLE-K 226 (279)
T ss_pred cccccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---HHh-C
Confidence 98765332211 0112234578999999988889999999999999999998 999998765433222 222 2
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
....+.+ ...+..+.+++.+||..+|.+||++.+|++.|.++++..
T Consensus 227 ~~~~~~~---~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 227 GERLPQP---PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CCCCCCC---CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 2222222 224678999999999999999999999999999987644
No 173
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-39 Score=306.05 Aligned_cols=250 Identities=17% Similarity=0.266 Sum_probs=200.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
.++|++.+.||+|+||.||+|.+.. +..||||.+.... ....+.+|+.++..+.| +++..+..++......+++|||
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLSH-EKLVQLYGVCTKQRPIYIVTEY 80 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCCC-CCeeeEEEEEccCCCcEEEEEc
Confidence 4679999999999999999998754 4459999776543 34568899999999986 5677777777777888999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..++.++.||+.||.|||++|++|+||||+|||+ +.++.+||+|||+++........
T Consensus 81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~~~- 156 (256)
T cd05113 81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDEYT- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCcee-
Confidence 9 789999887655579999999999999999999999999999999999999 47789999999998865433211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+...... +. ..
T Consensus 157 -----~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~~~~~-~~---~~ 224 (256)
T cd05113 157 -----SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKVSQGLRL-YR---PH 224 (256)
T ss_pred -----ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHHhcCCCC-CC---CC
Confidence 1113345678999999998889999999999999999998 999998654332 22233322211 11 12
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
..+..+.+++.+||..+|++||++.+|+..|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 3478999999999999999999999998765
No 174
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.3e-39 Score=311.35 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=204.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+-.++|++.+.||+|+||.||+|.+... ...||+|+....... ..+.+|+.++..+..++++..+..++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 3457899999999999999999998643 367999987754332 34778999999996557777777777777
Q ss_pred CeeEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYC---------------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 139 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~ 139 (423)
...+++|||+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~-- 166 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT-- 166 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc--
Confidence 8899999999 88999998642 24589999999999999999999999999999999999994
Q ss_pred CCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchh
Q 014544 140 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKA 218 (423)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~ 218 (423)
+++.+||+|||+++.+....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+...
T Consensus 167 -~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 240 (293)
T cd05053 167 -EDHVMKIADFGLARDIHHIDYYR-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 240 (293)
T ss_pred -CCCeEEeCcccccccccccccee-----ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH
Confidence 78899999999998765432211 1112345678999999998889999999999999999997 9999986543
Q ss_pred hhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 219 ATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
.. .+..+.. ..... .....+..+.+|+.+||..+|++||++.+|++.|++++
T Consensus 241 ~~---~~~~~~~-~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 EE---LFKLLKE-GYRME---KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HH---HHHHHHc-CCcCC---CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 22 2222222 11111 12344789999999999999999999999999998764
No 175
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-39 Score=307.29 Aligned_cols=251 Identities=19% Similarity=0.314 Sum_probs=198.3
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeee------CCe
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVD------GED 77 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~------~~~ 77 (423)
..+.|++.+.||+|+||.||+|.+..+++.||+|+..... ....+..|+.++..+.+++++..+..++.. ...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 83 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 83 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence 4578999999999999999999999999999999876543 334588899999999766777666555443 245
Q ss_pred eEEEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 78 NVLVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
.+++|||+ +++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+||++ ++++.++|+|||++..
T Consensus 84 ~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 84 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQ 160 (272)
T ss_pred EEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCCcee
Confidence 79999999 78999988753 3468999999999999999999999999999999999999 4788999999999986
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
...... ......|+..|+|||++. +..++.++|||||||++|||++|..||.......... .+..
T Consensus 161 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~---~~~~ 230 (272)
T cd06637 161 LDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF---LIPR 230 (272)
T ss_pred cccccc-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH---HHhc
Confidence 543221 123457899999999986 3357889999999999999999999997644322111 1111
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.... ......++..+.+||.+||..+|.+||+++++++
T Consensus 231 ~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPAP---RLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCCC---CCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 1111 1112345789999999999999999999998865
No 176
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-40 Score=320.43 Aligned_cols=259 Identities=21% Similarity=0.338 Sum_probs=219.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.....+||-|.||+||.|.|++..-.||||.++.+.. ..+|+.|+.+|+.+.|+ +++.+...+..+..+|||+|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHp-NLVqLLGVCT~EpPFYIiTEfM~ 346 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHP-NLVQLLGVCTHEPPFYIITEFMC 346 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCc-cHHHHhhhhccCCCeEEEEeccc
Confidence 34567789999999999999999999999999887764 45699999999999874 4555656666777899999999
Q ss_pred CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 ~~sL~~~l~~~~~~-l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
.|+|.+++..+++. ++.-..+.++.||..|++||..+++|||||..+|+|++ .+..||++|||+++.+..++...|
T Consensus 347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDTYTAH 423 (1157)
T KOG4278|consen 347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDTYTAH 423 (1157)
T ss_pred CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCceecc
Confidence 99999999988754 67777888999999999999999999999999999996 788999999999999887765443
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
....-...|.|||.+.-..++.|+|||+|||+|||+.| |.-||.+.+-..... ++++.+....+ .+
T Consensus 424 ------AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~----LLEkgyRM~~P---eG 490 (1157)
T KOG4278|consen 424 ------AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG----LLEKGYRMDGP---EG 490 (1157)
T ss_pred ------cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH----HHhccccccCC---CC
Confidence 23445678999999999999999999999999999998 999999976543333 34444444433 34
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCC
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYD 283 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~ 283 (423)
+|+.+.+||+.||+++|.+||+|.+|.+.|+.+|....++
T Consensus 491 CPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis 530 (1157)
T KOG4278|consen 491 CPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS 530 (1157)
T ss_pred CCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence 5999999999999999999999999999999999876554
No 177
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=328.05 Aligned_cols=249 Identities=17% Similarity=0.311 Sum_probs=204.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+-|+|+..||.|+||.||+|..+.++-..|-|++.... ....++-|++||..+.| +++..+...+...+.++|..||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdH-P~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDH-PVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCC-hHHHHHHHHHhccCceEEEEee
Confidence 35788999999999999999999888888889876543 34468899999999986 5555554444456789999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
| ||....++....+.+++.++..+++|++.||.|||+++|||||||..|||++ -+|.|+|+|||.+........
T Consensus 111 C~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T---ldGdirLADFGVSAKn~~t~q-- 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT---LDGDIRLADFGVSAKNKSTRQ-- 185 (1187)
T ss_pred cCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE---ecCcEeeecccccccchhHHh--
Confidence 9 7778888888899999999999999999999999999999999999999996 789999999999876543322
Q ss_pred cccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 164 HIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
....++|||+|||||+.. ..+|+.++||||||++|.||..+.+|....+... .+.+|.. -.+|.-
T Consensus 186 -----kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR---VllKiaK--SePPTL 255 (1187)
T KOG0579|consen 186 -----KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR---VLLKIAK--SEPPTL 255 (1187)
T ss_pred -----hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH---HHHHHhh--cCCCcc
Confidence 234789999999999875 5579999999999999999999999998876653 3333322 222322
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+..++..|.+|+..||.+||..||++.+|++
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 333566889999999999999999999999864
No 178
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.4e-39 Score=305.71 Aligned_cols=248 Identities=19% Similarity=0.294 Sum_probs=193.1
Q ss_pred eeeecCceeEEEEEEc--CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CC
Q 014544 14 KIGSGSFGEIFLASHV--DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GP 87 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~--~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~ 87 (423)
.||+|+||.||+|.+. ..+..||+|++..... .+.+.+|+.+++.++|++.+. +..+. .....++||||+ ++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~-~~~~~-~~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVR-MIGVC-EAEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEE-EEEEE-cCCCeEEEEEeCCCC
Confidence 4899999999999875 4455799998875533 234789999999998755444 43333 345789999999 88
Q ss_pred CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 88 SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 88 sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
+|.+++......+++..++.++.||+.||.|||++|++||||||+|||+ +.++.+||+|||++..........
T Consensus 80 ~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~---- 152 (257)
T cd05115 80 PLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYY---- 152 (257)
T ss_pred CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccce----
Confidence 9999887656679999999999999999999999999999999999999 478899999999998654332211
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
.......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+....+.. ..+.. ....+ .....++
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~---~~~~~-~~~~~---~~~~~~~ 225 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVM---SFIEQ-GKRLD---CPAECPP 225 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHH---HHHHC-CCCCC---CCCCCCH
Confidence 11112234578999999998889999999999999999996 99999876544322 22222 11111 1234588
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
++.++|.+||..+|++||++.+|.+.|+.++
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 9999999999999999999999999998764
No 179
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=7.8e-40 Score=308.51 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=199.4
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
..++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+|+.+++.++| +++..+..+....+..+++|
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h-~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKH-SNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCC-CCeeeEEEEEEeCCEEEEEE
Confidence 34689999999999999999999999999999998765432 2346789999999876 55666666667788999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+++.. .+.+++.+++.++.|++.||.|||++|++|+||||+||++ +..+.++|+|||++........
T Consensus 86 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 86 EFCGGGSLQDIYHV-TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred eccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCccc
Confidence 999 7799998764 4579999999999999999999999999999999999999 4788999999999876643221
Q ss_pred CCcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
......|+..|+|||.+. +..++.++|||||||++|+|++|..||....... ............+..
T Consensus 162 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~ 231 (267)
T cd06645 162 -------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR---ALFLMTKSNFQPPKL 231 (267)
T ss_pred -------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh---hHHhhhccCCCCCcc
Confidence 123457899999999985 4458899999999999999999999997543221 111111222222211
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+.++|.+||..+|++||++++|++
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 111245788999999999999999999998864
No 180
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.6e-39 Score=304.22 Aligned_cols=246 Identities=23% Similarity=0.279 Sum_probs=201.0
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+|++.+.||.|+||.||++.+..+++.||+|.++... ..+.+..|+.+++.++| +++..+..++......+++|||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 79 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKH-PNIVAFKESFEADGHLYIVMEY 79 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCC-CCcceEEEEEEECCEEEEEEee
Confidence 5899999999999999999999999999999875432 33457789999999887 5566677677788899999999
Q ss_pred c-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 85 L-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 85 ~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||++ ++++.++|+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeeccccc-
Confidence 9 78999888643 3458999999999999999999999999999999999999 4788999999999987644322
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......|+..|+|||++.+..++.++||||||+++|+|++|..||...... ..+..+...... + ...
T Consensus 156 ------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-~---~~~ 222 (255)
T cd08219 156 ------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK---NLILKVCQGSYK-P---LPS 222 (255)
T ss_pred ------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH---HHHHHHhcCCCC-C---CCc
Confidence 112456889999999999988999999999999999999999999864332 222233222222 1 123
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++..+.++|.+||..||++||++.+|+.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 45788999999999999999999999875
No 181
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-39 Score=306.44 Aligned_cols=252 Identities=21% Similarity=0.368 Sum_probs=196.6
Q ss_pred eEEeceeeecCceeEEEEEEcCC---CceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-----
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE----- 76 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~----- 76 (423)
|++++.||+|+||.||+|.+..+ +..||||++..... ...+..|+..++.+.|++ +..+..+.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPN-VMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCC-eeeEEeeeccCCccccC
Confidence 67899999999999999997653 47799998875432 235788999999998754 444444333322
Q ss_pred -eeEEEEecc-CCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEee
Q 014544 77 -DNVLVLDLL-GPSLEDLFVYCR-----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 77 -~~~lv~e~~-~~sL~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
..+++|||+ +++|..++.... ..+++..++.++.|++.||.|||++|++||||||+||++ ++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEECC
Confidence 378999999 889998885431 358999999999999999999999999999999999999 4788999999
Q ss_pred ccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHH
Q 014544 150 FGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (423)
||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... +.+..+
T Consensus 157 fg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYL 228 (273)
T ss_pred ccceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH
Confidence 9999876543321 11122345678999999998889999999999999999999 99999875443 223333
Q ss_pred HhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 229 CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
.... ... ....++..+.+++.+||+.||++||++.+|++.|+++
T Consensus 229 ~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 RHGN-RLK---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HcCC-CCC---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2221 111 2245688999999999999999999999999999876
No 182
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.3e-39 Score=305.34 Aligned_cols=250 Identities=20% Similarity=0.297 Sum_probs=199.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..+|++.+.||+|+||.||+|.+. ++..+|+|++.... ....+.+|+++++.+.| +++..+..++......++||||
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSH-PNLVQLYGVCTKQRPIFIVTEY 80 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCC-CCEEEEEEEEcCCCceEEEEec
Confidence 457899999999999999999876 46679999876543 33468889999999976 5566666667777889999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+||++ +.++.+||+|||+++...+....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~~~- 156 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQYT- 156 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccccccc-
Confidence 9 889999987655678999999999999999999999999999999999999 47889999999999865432211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||.+.+..++.++|||||||++|+|++ |+.||....... ....+.. ....+. ..
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~-~~~~~~---~~ 224 (256)
T cd05059 157 -----SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVESVSA-GYRLYR---PK 224 (256)
T ss_pred -----ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHHHHHc-CCcCCC---CC
Confidence 1112234567999999999899999999999999999999 899998654432 2222221 111111 13
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
..|.++.+++.+||..+|++||++.+|++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 225 LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 4588999999999999999999999998865
No 183
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.9e-40 Score=313.39 Aligned_cols=254 Identities=18% Similarity=0.216 Sum_probs=200.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
..+|++.+.||+|+||.||+|.+..+ ++.||||++...... ..+..|+.++..++| +++..+..+......
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h-~~iv~~~~~~~~~~~ 82 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH-PNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCC-CCcCeEEEEEcCCCc
Confidence 45688999999999999999987543 578999998755432 347788888888886 556666666677778
Q ss_pred eEEEEecc-CCCHHHHHHHh---------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 78 NVLVLDLL-GPSLEDLFVYC---------------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
.++++||+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||+. +
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---D 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---C
Confidence 99999999 78898887531 13478889999999999999999999999999999999994 6
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhh
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAAT 220 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~ 220 (423)
++.+||+|||+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |..||.+....
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~- 233 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYY-----KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ- 233 (283)
T ss_pred CCceEecccccccccccchhe-----eeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-
Confidence 788999999998865433211 11223456789999999998889999999999999999998 88999875443
Q ss_pred hHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 221 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
+.+..+...... .....+|..+.+++..||+.+|++||++++|+..|+.
T Consensus 234 --~~~~~i~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 234 --DVIEMIRNRQVL----PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred --HHHHHHHcCCcC----CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 333333333221 1224568999999999999999999999999998874
No 184
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.2e-39 Score=302.99 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=203.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||+|.++... ....+.+|+++++.+.| +++..+..++...+..+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~-~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDH-PNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCC-CCeeeeeeeeecCCeEEEE
Confidence 58999999999999999999999899999999765321 23457899999999976 4555566666677889999
Q ss_pred Eecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 82 LDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|||+ +++|.+++... ...+++..++.++.|++.||.|||+.||+||||+|+||++ +.++.++|+|||++..+.
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence 9999 78999988643 3458999999999999999999999999999999999999 478899999999988654
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
..... .....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ........+..... .+.
T Consensus 158 ~~~~~-------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~-~~~ 228 (267)
T cd08224 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEKCDY-PPL 228 (267)
T ss_pred CCCcc-------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc-cHHHHHhhhhcCCC-CCC
Confidence 43221 1234688899999999988899999999999999999999999965331 11122222222211 111
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+ ...++..+.++|.+||..+|++||++.+|++.|+++
T Consensus 229 ~--~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 229 P--ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred C--hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 1 124578999999999999999999999999998865
No 185
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.8e-39 Score=305.01 Aligned_cols=254 Identities=21% Similarity=0.363 Sum_probs=202.3
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+|..+.|+++++||+|+||.||+|... +++.||+|.+..... ...+.+|+.+++.++|. ++..+..+. .....+++
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~-~~~~~~~v 78 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHP-RLVRLYAVV-TQEPIYII 78 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCc-CeeeEEEEE-ccCCcEEE
Confidence 467889999999999999999999865 467899998775443 44688999999999874 454454443 34568999
Q ss_pred Eecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||+ +++|.+++... ...+++..++.++.|++.||+|||+.|++||||||+||++ ++++.++|+|||++......
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCCC
Confidence 9999 88999988643 3468999999999999999999999999999999999999 47889999999999876532
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||.+........ .+ ......+
T Consensus 156 ~~~------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~---~~-~~~~~~~-- 223 (260)
T cd05067 156 EYT------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQ---NL-ERGYRMP-- 223 (260)
T ss_pred Ccc------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHH---HH-HcCCCCC--
Confidence 211 1123345778999999998889999999999999999999 999998755432222 22 2222222
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.....|.++.+++.+||..+|++||++++|...|++
T Consensus 224 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 -RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 123458899999999999999999999999998874
No 186
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.1e-39 Score=310.08 Aligned_cols=257 Identities=21% Similarity=0.341 Sum_probs=200.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..+++.||||.++.... ...+..|..++.+..+++++..+..+.......+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 479999999999999999999999999999998765432 23466677766666666777777777777888999999
Q ss_pred ccCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 84 LLGPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+.++|.+++... ...+++..++.++.||+.||.|||++ +++||||||+|||+ +.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecccccccccc
Confidence 9999998888642 34589999999999999999999997 99999999999999 57889999999999865432
Q ss_pred CCCCcccccCCCCcccccCccccchhcC----CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG----IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.. .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... ..+.+..+..... .
T Consensus 158 ~~--------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~-~ 226 (283)
T cd06617 158 VA--------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT--PFQQLKQVVEEPS-P 226 (283)
T ss_pred cc--------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc--CHHHHHHHHhcCC-C
Confidence 21 113467889999999865 4468899999999999999999999975322 1122222222111 1
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
.. ....+|.++.++|.+||..+|++||++++|+. +.++....
T Consensus 227 ~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~~ 268 (283)
T cd06617 227 QL--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ--HPFFELHL 268 (283)
T ss_pred CC--CccccCHHHHHHHHHHccCChhhCcCHHHHhc--Cchhhhcc
Confidence 11 11245889999999999999999999999966 45554443
No 187
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.7e-39 Score=311.37 Aligned_cols=257 Identities=20% Similarity=0.317 Sum_probs=198.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcC----------------CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVD----------------TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIP 66 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~----------------~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~ 66 (423)
.++|++.+.||+|+||.||+|.+.. +...||+|++..... ...+.+|+.+++.++| +++.
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~-~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKD-PNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCcc
Confidence 4689999999999999999986532 344699998875432 2457899999999976 5666
Q ss_pred eEEEeeeeCCeeEEEEecc-CCCHHHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceE
Q 014544 67 NIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCR----------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFL 135 (423)
Q Consensus 67 ~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NIL 135 (423)
.+..++......+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil 162 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL 162 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence 7777777788899999999 789999887532 23678899999999999999999999999999999999
Q ss_pred EeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh--CCCCC
Q 014544 136 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--GSLPW 213 (423)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf 213 (423)
++ .++.++|+|||+++.+...... .......++..|+|||...+..++.++|||||||++|||++ |..||
T Consensus 163 i~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 163 VG---KNYTIKIADFGMSRNLYSGDYY-----RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred Ec---CCCCEEeccCcccccccCCcce-----eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 94 6889999999999865432211 11122344678999999988889999999999999999998 78999
Q ss_pred CCchhhhhHHHHHHHHhh---ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 214 QGLKAATKKQKYDKICEK---KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
.................. ....+. ...+|+.+.+|+..||+.||.+||++.+|.+.|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 235 SQLSDEQVIENTGEFFRDQGRQVYLPK---PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred cccChHHHHHHHHHHHhhccccccCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 765443222221111111 111111 1335789999999999999999999999998875
No 188
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=3.6e-39 Score=308.41 Aligned_cols=256 Identities=20% Similarity=0.247 Sum_probs=198.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe-----
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGED----- 77 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~----- 77 (423)
++|++.+.||+|+||.||+|.+..+++.||||...... ....+.+|+.++..+.+++++..+..++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 47999999999999999999999999999999866443 224578899999999887788777766655444
Q ss_pred eEEEEeccCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 78 NVLVLDLLGPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 78 ~~lv~e~~~~sL~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
.|++|||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++ ...+.+||+|||++
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~--~~~~~~kl~dfg~~ 158 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD--KQKGLLKIADLGLG 158 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe--cCCCeEEEeecccc
Confidence 79999999889999886532 3589999999999999999999999999999999999995 23789999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+.+..... ......+++.|+|||.+.+ ..++.++|||||||++|+|++|..||.+.........+.......
T Consensus 159 ~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 231 (295)
T cd07837 159 RAFSIPVK-------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTP 231 (295)
T ss_pred eecCCCcc-------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 86543221 1123356889999998875 457899999999999999999999998754432222111110000
Q ss_pred --------------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 --------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 --------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...........++.++.++|.+||..||.+||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000111122456889999999999999999999998864
No 189
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.5e-40 Score=307.29 Aligned_cols=248 Identities=25% Similarity=0.434 Sum_probs=194.1
Q ss_pred EEeceeeecCceeEEEEEEc----CCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 10 KLGRKIGSGSFGEIFLASHV----DTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~----~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++.+.||.|.||.||+|.+. ..+..|+||+++.... ...+.+|++.+..++| +++..+..+....+..++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRH-PNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSB-TTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccc-cccccccccccccccccccc
Confidence 57899999999999999997 3456799999966443 3468999999999955 66777777777777899999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..++.|+.||+.||.|||+++++|+||+++|||++ .++.+||+|||++.......
T Consensus 81 e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD---SNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp E--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE---TTTEEEEESTTTGEETTTSS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccc
Confidence 999 68999999876 56799999999999999999999999999999999999994 78899999999998763222
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ...........|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+..... .+
T Consensus 158 ~~-----~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~---~~~~~~~~~~-~~--- 225 (259)
T PF07714_consen 158 KY-----KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE---IIEKLKQGQR-LP--- 225 (259)
T ss_dssp SE-----EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH---HHHHHHTTEE-TT---
T ss_pred cc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccc-ce---
Confidence 11 11224456789999999998889999999999999999999 789998764433 2333322222 11
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
....+|..+.++|..||..+|++||++.+|++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1234589999999999999999999999998865
No 190
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.6e-39 Score=341.58 Aligned_cols=263 Identities=27% Similarity=0.374 Sum_probs=205.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+|++++..+.| +++..+..++.+.+..+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~H-PNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIH-PGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCC-cCcCeEEEEEeeCCEEEEE
Confidence 689999999999999999999999999999998865422 2357889999999987 5566666667778899999
Q ss_pred Eecc-CCCHHHHHHHh----------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeec
Q 014544 82 LDLL-GPSLEDLFVYC----------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDF 150 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~----------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DF 150 (423)
|||+ +++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.++|+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEec
Confidence 9999 88999988642 1235677889999999999999999999999999999999 47889999999
Q ss_pred cceeeccCCCCCC-----------cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh
Q 014544 151 GLAKKYRDPTTNR-----------HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 219 (423)
Q Consensus 151 Gla~~~~~~~~~~-----------~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ 219 (423)
|+++......... ...........||+.|+|||.+.+..++.++|||||||++|||++|..||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 9998763211100 00011223467999999999999999999999999999999999999999864322
Q ss_pred hhHHHHHHHHhhccCCchHH-hhccChHHHHHHHHHHHcCCCCCCC-ChHHHHHHHHHHHHh
Q 014544 220 TKKQKYDKICEKKVSTPIEV-LCKSHPAEFASYFHYCQSLTFDQRP-DYGFLKRLFHDLFSR 279 (423)
Q Consensus 220 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RP-t~~~l~~~L~~~~~~ 279 (423)
... . ......+... ....+|+.+.+++.+||..||++|| +++++.+.|+.++..
T Consensus 238 ki~--~----~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KIS--Y----RDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhh--h----hhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111 1 1111111111 1235688999999999999999996 668888888887754
No 191
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2e-39 Score=306.02 Aligned_cols=257 Identities=18% Similarity=0.281 Sum_probs=204.7
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCC---ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTN---EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~---~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+..... ...+.+|+.++..++| +++..+..++...+..
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDH-PNIIHLEGVVTKSKPV 80 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCC-CCcceEEEEEecCCcc
Confidence 3578999999999999999999986443 3699998765432 2357889999999976 5676777777778889
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
+++|||+ +++|.+++......+++.+++.++.|++.||.|||++|++||||||+|||+ +.++.++|+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence 9999999 789999988666678999999999999999999999999999999999999 478899999999998765
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....... ......++..|+|||.+.+..++.++|||||||++|++++ |..||.+..... .+..+.. ....+
T Consensus 158 ~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~~-~~~~~ 229 (267)
T cd05066 158 DDPEAAY----TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIEE-GYRLP 229 (267)
T ss_pred cccceee----ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHhC-CCcCC
Confidence 4322110 1112234568999999998889999999999999999886 999998754432 2222222 22222
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
. ...+|+.+.+++.+||+.+|.+||++.++++.|+++
T Consensus 230 ~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 A---PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred C---CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 2 134588999999999999999999999999998865
No 192
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.6e-40 Score=307.84 Aligned_cols=251 Identities=22% Similarity=0.340 Sum_probs=204.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..+|++.+.||.|+||.||+|.+.. ++.+++|++..... ...+..|+.+++.++| +++..+..++......++|||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRH-KHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCC-cchhheeeeEecCCCeEEEEe
Confidence 3579999999999999999999987 88899998876543 4568889999999976 566666667778888999999
Q ss_pred cc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchhhcCCccc
Confidence 99 78999998753 34589999999999999999999999999999999999994 788999999999976643321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.+.... +.+..+.. ....+.
T Consensus 160 ~-------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~---~~~~~~~~-~~~~~~--- 225 (261)
T cd05148 160 L-------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH---EVYDQITA-GYRMPC--- 225 (261)
T ss_pred c-------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHHh-CCcCCC---
Confidence 1 113345678999999998889999999999999999998 89999875433 23333322 222222
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
....|+.+.++|.+||..+|.+||++.+|.+.|+.
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 23458899999999999999999999999999875
No 193
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.6e-39 Score=314.55 Aligned_cols=263 Identities=19% Similarity=0.307 Sum_probs=207.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCC-------CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT-------NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~-------~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
+...+|++++.||+|+||.||+|++... ...||+|++..... ...+.+|+.+++.+..++++..+..++.
T Consensus 9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 4456899999999999999999986432 23689998775432 2457889999999965677777777777
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEe
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMG 137 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~ 137 (423)
.....+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 778899999999 889999986422 2478899999999999999999999999999999999994
Q ss_pred ccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCc
Q 014544 138 LGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGL 216 (423)
Q Consensus 138 ~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~ 216 (423)
.++.+||+|||+++......... ......++..|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus 169 ---~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 240 (334)
T cd05100 169 ---EDNVMKIADFGLARDVHNIDYYK-----KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 240 (334)
T ss_pred ---CCCcEEECCcccceecccccccc-----cccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC
Confidence 77899999999998764322111 1112344568999999999999999999999999999998 89999875
Q ss_pred hhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 217 KAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 217 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
.... .+..+.. ....+ .....+.++.+++.+||..+|++||++.+|++.|+.++....
T Consensus 241 ~~~~---~~~~~~~-~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~~ 298 (334)
T cd05100 241 PVEE---LFKLLKE-GHRMD---KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVTS 298 (334)
T ss_pred CHHH---HHHHHHc-CCCCC---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhcC
Confidence 4332 2222222 11111 123457899999999999999999999999999999986554
No 194
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.6e-39 Score=305.33 Aligned_cols=253 Identities=23% Similarity=0.386 Sum_probs=199.5
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+..++|++.+.||+|+||.||+|.+. .+..||+|.+.... ....+.+|+.+++.++|.+.+. +..+. .....+++|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~-~~~~~-~~~~~~lv~ 79 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQ-LYAVV-SEEPIYIVT 79 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEE-EEeEE-CCCCcEEEE
Confidence 56788999999999999999999875 45669999877543 3456889999999998755444 43333 345678999
Q ss_pred ecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++ +++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeeeeccCcc
Confidence 999 78999988653 34589999999999999999999999999999999999994 67899999999998764432
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+..... ....+. .....+.
T Consensus 157 ~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~~-~~~~~~~-- 224 (260)
T cd05070 157 YT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VLEQVE-RGYRMPC-- 224 (260)
T ss_pred cc------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH-cCCCCCC--
Confidence 11 1112345678999999998889999999999999999999 999998754432 222222 1222221
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
....|..+.+++.+||..+|++||++++|.+.|++
T Consensus 225 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 225 -PQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 23458899999999999999999999999988874
No 195
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.3e-39 Score=301.86 Aligned_cols=246 Identities=25% Similarity=0.305 Sum_probs=201.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|.+..+++.|++|.+... .....+..|+++++.++| +++..+..++......++|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDS-SYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCC-CCeehheeeeccCCEEEEEEE
Confidence 488999999999999999999999999999987643 233457889999999986 555556666667788999999
Q ss_pred cc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++... ...++...++.++.|++.||.|||++|++|+||||+||+++ .++.++|+|||+++.+.....
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccceeccCccc
Confidence 99 88999998764 45789999999999999999999999999999999999994 778999999999987654322
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+....... ..
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~----~~ 222 (256)
T cd08529 157 F-------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKIIRGVFPP----VS 222 (256)
T ss_pred h-------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHcCCCCC----Cc
Confidence 1 12456889999999999988999999999999999999999999865432 2333333322221 11
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++..+.+++.+||+.+|++||++.+|++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 245889999999999999999999998865
No 196
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.3e-39 Score=305.83 Aligned_cols=258 Identities=18% Similarity=0.296 Sum_probs=203.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCc---eEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNE---IVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~---~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
.+.|++.+.||+|+||.||+|.+..+++ .||||++..... ...+..|+.+++.+.| +++..+..+.......+
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH-PNIIHLEGVVTKSRPVM 81 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCC-cCcceEEEEECCCCceE
Confidence 4679999999999999999999876654 599998875432 3358889999999976 55666777777788899
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+||||+ +++|.+++....+.+++..++.++.|++.||.|||++|++||||||+||++ +.++.++|+|||++.....
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 82 IITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCcccccccc
Confidence 999999 779999887666679999999999999999999999999999999999999 4788999999999876543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
...... +........+..|+|||.+.+..++.++|||||||++|||++ |..||........ ...+. .....+.
T Consensus 159 ~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~---~~~i~-~~~~~~~ 232 (269)
T cd05065 159 DTSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV---INAIE-QDYRLPP 232 (269)
T ss_pred Cccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH---HHHHH-cCCcCCC
Confidence 322110 111111122457999999999899999999999999999886 9999987544322 22222 2222222
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
. ..+|..+.+++.+||..+|++||++++|+..|+.+
T Consensus 233 ~---~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 233 P---MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred c---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 34588999999999999999999999999988865
No 197
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.7e-39 Score=305.00 Aligned_cols=258 Identities=18% Similarity=0.271 Sum_probs=204.7
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCc---eEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNE---IVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~---~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
|..++|+..+.||+|+||.||+|++..++. .+|+|.+..... ...+..|++++..+.|+ ++..+..++...+.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~ 80 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHH-NIIRLEGVVTKFKP 80 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCC-CeeEEEEEEccCCC
Confidence 456789999999999999999999876554 699998765432 34578899999999764 56667777777788
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++||||+ +++|.+++......+++..+..++.|++.||+|||+.|++||||||+||++ +.++.+||+|||++...
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVL 157 (268)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceec
Confidence 99999999 789999887656779999999999999999999999999999999999999 47889999999999866
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
........ .......+..|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.. ....
T Consensus 158 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~---~~~~~i~~-~~~~ 229 (268)
T cd05063 158 EDDPEGTY----TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH---EVMKAIND-GFRL 229 (268)
T ss_pred ccccccce----eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH---HHHHHHhc-CCCC
Confidence 43322110 0112223467999999998889999999999999999997 99999765432 22222222 2222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+.. ...|..+.+++.+||..+|++||++.+|++.|+++
T Consensus 230 ~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 PAP---MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 221 24588999999999999999999999999999875
No 198
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.6e-39 Score=304.01 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=199.8
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+..++|++.+.||+|+||.||+|.+..+. .||+|++.... ....+.+|+++++.+.|++.++.+. +. .....+++|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~-~~~~~~~v~ 79 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYA-VV-SEEPIYIVT 79 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEE-EE-cCCCcEEEE
Confidence 45678999999999999999999886544 59999876543 3346889999999998866555443 33 345678999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||++ ++++.++|+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCCc
Confidence 999 679999987533 348999999999999999999999999999999999999 478899999999998764332
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+..... ....+.. ....+
T Consensus 157 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~-~~~~~--- 223 (260)
T cd05069 157 YT------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVER-GYRMP--- 223 (260)
T ss_pred cc------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc-CCCCC---
Confidence 11 1123346778999999998889999999999999999999 999998754432 2222222 22221
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.....|..+.+++.+||..+|++||++++|.+.|++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 123468899999999999999999999999998874
No 199
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.8e-39 Score=307.57 Aligned_cols=256 Identities=20% Similarity=0.297 Sum_probs=203.0
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
++..++|++.+.||+|+||.||+|.+... +..||+|....... ...+.+|+.++..+.| +++..+..+...
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~ 80 (277)
T cd05032 2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNC-HHVVRLLGVVST 80 (277)
T ss_pred ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCC-CceeEEEEEEcC
Confidence 35568999999999999999999998643 37899998765432 2347789999998876 566677777777
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCe
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQ 144 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~ 144 (423)
....++||||+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~ 157 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLT 157 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCC
Confidence 88899999999 789999986422 236788999999999999999999999999999999999 47889
Q ss_pred EEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHH
Q 014544 145 VYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQ 223 (423)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~ 223 (423)
+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.....
T Consensus 158 ~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--- 229 (277)
T cd05032 158 VKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--- 229 (277)
T ss_pred EEECCcccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---
Confidence 999999999865443211 12224456789999999998889999999999999999998 999998654332
Q ss_pred HHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 224 KYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 224 ~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
....+.... ..+ .....+..+.+++.+||..+|++||++.+|++.|+
T Consensus 230 ~~~~~~~~~-~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 230 VLKFVIDGG-HLD---LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHhcCC-CCC---CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 222222211 111 12334889999999999999999999999998875
No 200
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.6e-39 Score=306.26 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=203.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||||.+.... ....+.+|+.+++.+.| +++..+..++...+..+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH-PNVIKYYASFIEDNELNIV 80 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccC-CchhhhhheeEeCCeEEEE
Confidence 57899999999999999999999899999999765422 22357789999999976 5566666666677889999
Q ss_pred Eecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 82 LDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|||+ +++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||++ +.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhccc
Confidence 9999 78999988642 3458999999999999999999999999999999999999 478899999999987664
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
..... .....++..|+|||.+.+..++.++||||||+++|+|++|..||.+... ........+...... +.
T Consensus 158 ~~~~~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~-~~ 228 (267)
T cd08229 158 SKTTA-------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM-NLYSLCKKIEQCDYP-PL 228 (267)
T ss_pred cCCcc-------cccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc-hHHHHhhhhhcCCCC-CC
Confidence 33221 1245688999999999988899999999999999999999999976432 112222222211111 11
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
.....+..+.+++.+||..+|++||++.+|++.+.++
T Consensus 229 --~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 229 --PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred --CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1124578999999999999999999999999988865
No 201
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.8e-39 Score=310.44 Aligned_cols=252 Identities=17% Similarity=0.290 Sum_probs=199.6
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
..++.|++.+.||.|+||.||+|++..+++.|++|++..... ...+.+|+.+++.+.| +++..+..++......++|
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNH-PYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCC-CcEeeeEEEEEeCCeEEEE
Confidence 346789999999999999999999999999999998865432 3357789999999986 5566666666677889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|..++......+++..++.++.||+.||.|||++|++||||||+||++ +.++.++|+|||++.......
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceeccccc
Confidence 9999 778877776656679999999999999999999999999999999999999 468899999999987643322
Q ss_pred CCCcccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
. ......++..|+|||.+. ...++.++|||||||++|+|++|..||...... ..+.++.... .
T Consensus 165 ~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~--~ 232 (292)
T cd06644 165 Q-------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSE--P 232 (292)
T ss_pred c-------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH---HHHHHHhcCC--C
Confidence 1 122456889999999985 344688999999999999999999999764432 2222222211 1
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+.......++.++.++|.+||..+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111122345788999999999999999999998865
No 202
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.4e-39 Score=305.49 Aligned_cols=251 Identities=22% Similarity=0.248 Sum_probs=197.2
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeC--CeeEEEEe
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDNVLVLD 83 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~~lv~e 83 (423)
|++.+.||+|+||.||+|.+..+++.||+|++.... ......+|+.++..+.+++++..+..++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 788999999999999999999999999999876532 2223457888888887667777777666666 78999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|+.++|.+.+......+++..++.++.||+.||+|||++|++||||||+||+++ . +.+||+|||+++........
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~~~- 155 (282)
T cd07831 81 LMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKPPY- 155 (282)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCCCc-
Confidence 998899998876556799999999999999999999999999999999999994 5 99999999999876433221
Q ss_pred cccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc----------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK---------- 232 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~---------- 232 (423)
....++..|+|||.+.+ ..++.++|||||||++|||++|..||.+.+..+............
T Consensus 156 -------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 156 -------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred -------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcc
Confidence 13457889999997654 457889999999999999999999998754432222221111000
Q ss_pred -----cC------CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 -----VS------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 -----~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.. .....+...++.++.++|.+||..+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00 0111223456889999999999999999999998865
No 203
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2.8e-39 Score=305.38 Aligned_cols=253 Identities=19% Similarity=0.322 Sum_probs=194.5
Q ss_pred eEEeceeeecCceeEEEEEEcCCCc--eEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee-----eCCe
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNE--IVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DGED 77 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~--~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~~~ 77 (423)
|.+++.||+|+||.||+|.+..++. .||+|.++... ....+..|+++++.++|.+.+..+..+.. ....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 4578999999999999999877665 58999876542 23347889999999987544444333322 1234
Q ss_pred eEEEEecc-CCCHHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecc
Q 014544 78 NVLVLDLL-GPSLEDLFVYC-----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 151 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~-----~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFG 151 (423)
.+++|||+ +++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECCCC
Confidence 68999999 78998887532 2348899999999999999999999999999999999999 478899999999
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHh
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
+++........ .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+.... +.+..+..
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDYY-----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYDYLRQ 229 (272)
T ss_pred cccccCcccce-----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHc
Confidence 99876443211 11223356778999999999899999999999999999999 89999875433 22233322
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
... .+ ....++..+.++|.+||..+|++||++++|++.|+++
T Consensus 230 ~~~-~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNR-LK---QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC-CC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 211 11 1234578999999999999999999999999998875
No 204
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.7e-39 Score=307.76 Aligned_cols=258 Identities=21% Similarity=0.312 Sum_probs=201.9
Q ss_pred cccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+..++|++.+.||+|+||.||+|.++. .+..||+|.+...... ..+.+|+.+++.+.| +++..+..+....
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~ 81 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC-HHVVRLLGVVSKG 81 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCC-CCeeeEEEEEcCC
Confidence 456899999999999999999997652 3457999987654322 236778889998876 5677777667777
Q ss_pred CeeEEEEecc-CCCHHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeE
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCR---------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQV 145 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~v 145 (423)
...++||||+ +++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++ .++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcE
Confidence 8899999999 899999997532 2356778999999999999999999999999999999994 78899
Q ss_pred EEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHH
Q 014544 146 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQK 224 (423)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~ 224 (423)
+|+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||.+.... +.
T Consensus 159 ~L~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~---~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE---QV 230 (288)
T ss_pred EECcCCccccccccccc-----cccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH---HH
Confidence 99999999865432211 11223345678999999998889999999999999999998 89999875433 22
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
...+....... .....++.+.+++.+||+.+|++||++.++++.|++.+
T Consensus 231 ~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 231 LKFVMDGGYLD----QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHcCCCCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 22222221111 12345789999999999999999999999998888764
No 205
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=8.4e-39 Score=304.21 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=198.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+.| +++..+..+.......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKH-PNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCC-CCEeeeeeEEeeCCEEEEEE
Confidence 47999999999999999999999899999999875432 22346789999999987 45656666667788899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+.+++.+.+......+++..++.++.||+.||.|||+.|++||||||+||++ +.++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07847 80 EYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDD 156 (286)
T ss_pred eccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCccc
Confidence 999666555555445679999999999999999999999999999999999999 47789999999999876543321
Q ss_pred CcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc---------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--------- 232 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (423)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+....+............
T Consensus 157 -------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 157 -------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcc
Confidence 123467889999999876 457899999999999999999999998755433222222111100
Q ss_pred --------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 --------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 --------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+.......++..+.+|+.+||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 001112233456889999999999999999999998864
No 206
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.6e-39 Score=310.00 Aligned_cols=261 Identities=20% Similarity=0.314 Sum_probs=205.8
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC-------CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD-------TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~-------~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
-..+|.+.+.||+|+||.||+|++.. ....||+|++...... ..+..|+++++.+.+++++..+..++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 35689999999999999999998642 3456999987754332 3477899999999766778777777777
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEec
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL 138 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~ 138 (423)
....+++|||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~- 168 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT- 168 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc-
Confidence 78899999999 889999987532 3488999999999999999999999999999999999994
Q ss_pred cCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCch
Q 014544 139 GRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLK 217 (423)
Q Consensus 139 ~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~ 217 (423)
.++.+||+|||+++......... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||.+..
T Consensus 169 --~~~~~kL~Dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 169 --EDNVMKIADFGLARGVHDIDYYK-----KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred --CCCcEEEcccccccccccccccc-----ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 77899999999998664322111 1112234567999999999889999999999999999999 899998754
Q ss_pred hhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 218 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
... .+..+.... ... ....++.++.+++.+||..+|++||++.+|++.|.++....
T Consensus 242 ~~~---~~~~~~~~~-~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 242 VEE---LFKLLREGH-RMD---KPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHH---HHHHHHcCC-CCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 332 222222211 111 12345789999999999999999999999999999987644
No 207
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.9e-39 Score=303.46 Aligned_cols=250 Identities=21% Similarity=0.327 Sum_probs=204.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
.++|++.+.||+|+||.||+|.+..+++.|++|.+........+.+|+++++.++| +++..+..++......++++||+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDS-PYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCC-CcEeeeeeeeecCCcEEEEEecC
Confidence 36899999999999999999999988999999988766556779999999999965 55666666667778999999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+++......+++..++.++.|++.||.|||+.|++||||+|+||++ +.++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~~--- 154 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTMA--- 154 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCcc---
Confidence 789999987667789999999999999999999999999999999999999 4788999999999987654321
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||......... ..+.. ...+.......+
T Consensus 155 ----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~---~~~~~--~~~~~~~~~~~~ 225 (256)
T cd06612 155 ----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI---FMIPN--KPPPTLSDPEKW 225 (256)
T ss_pred ----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh---hhhcc--CCCCCCCchhhc
Confidence 112445788999999999989999999999999999999999999865432211 11111 111111112235
Q ss_pred hHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+..+.++|.+||+.+|++||++.+|+.
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 788999999999999999999998865
No 208
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.4e-39 Score=302.69 Aligned_cols=246 Identities=22% Similarity=0.330 Sum_probs=192.3
Q ss_pred eeeecCceeEEEEEE--cCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 14 KIGSGSFGEIFLASH--VDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~--~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
.||+|+||.||+|.+ ..++..||+|+++..... +.+..|+.++..+.|. ++..+..+. ..+..++||||+ +
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~-~~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNP-YIVRMIGIC-EAESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCC-CcceEEEEE-cCCCcEEEEecCCC
Confidence 689999999999975 356788999988754432 3578889999999774 455554444 345678999999 6
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. ...+++..++.++.||+.||+|||++||+||||||.|||+ +.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~--- 152 (257)
T cd05116 80 GPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYY--- 152 (257)
T ss_pred CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCee---
Confidence 889988864 4579999999999999999999999999999999999999 467899999999998764432210
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ....+.... ..+ ....+|
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~i~~~~-~~~---~~~~~~ 224 (257)
T cd05116 153 -KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNE---VTQMIESGE-RME---CPQRCP 224 (257)
T ss_pred -eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHCCC-CCC---CCCCCC
Confidence 11112344678999999988889999999999999999998 999998754432 222222221 111 223568
Q ss_pred HHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 246 AEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+++.++|.+||+.||++||++++|...|+++
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 9999999999999999999999999998864
No 209
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=4.9e-39 Score=302.10 Aligned_cols=250 Identities=25% Similarity=0.333 Sum_probs=200.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
+.|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.+.| +++..+..+....+..+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQH-ERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCC-CCeeeeEEEEccCCeEE
Confidence 579999999999999999999999999999998754321 2347789999999976 55666767777778999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+++||+ +++|.+++.. ...++...+..++.|++.||.|||+.||+||||+|+||++ +.++.++|+|||+++....
T Consensus 81 ~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 81 IFMEYMPGGSVKDQLKA-YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEEECCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceeccc
Confidence 999999 7899988875 4568999999999999999999999999999999999999 4778999999999976543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+..+.......
T Consensus 157 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~--- 226 (263)
T cd06625 157 ICSSGT----GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM---AAIFKIATQPTNP--- 226 (263)
T ss_pred cccccc----cccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH---HHHHHHhccCCCC---
Confidence 221110 012456788999999999988999999999999999999999999764332 2222222221111
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+.++|.+||..+|.+||++.+|+.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 259 (263)
T cd06625 227 QLPSHVSPDARNFLRRTFVENAKKRPSAEELLR 259 (263)
T ss_pred CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhh
Confidence 223456889999999999999999999999875
No 210
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3e-39 Score=306.95 Aligned_cols=244 Identities=22% Similarity=0.312 Sum_probs=193.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|++++..+.| +++..+..++...+..++|||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDS-PYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCC-CCeeeEEEEEEECCEEEEEEe
Confidence 368899999999999999999999999999998765422 2357789999999976 556666666677788999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|..+ ..+++..+..++.|++.||.|||+.||+|+||||+|||+ +.++.++|+|||++........
T Consensus 80 ~~~~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~~~- 150 (279)
T cd06619 80 FMDGGSLDVY-----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNSIA- 150 (279)
T ss_pred cCCCCChHHh-----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceecccccc-
Confidence 99 6666433 347889999999999999999999999999999999999 4788999999999986643321
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh----HHHHHHHHhhccCCchH
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK----KQKYDKICEKKVSTPIE 238 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~----~~~~~~i~~~~~~~~~~ 238 (423)
....|+..|+|||.+.+..++.++|||||||++|+|++|+.||........ ......+.... +..
T Consensus 151 --------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~ 219 (279)
T cd06619 151 --------KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED---PPV 219 (279)
T ss_pred --------cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC---CCC
Confidence 245789999999999998999999999999999999999999975332111 11111111111 111
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......++++.++|.+||..+|++||+++++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 112335788999999999999999999999866
No 211
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.5e-39 Score=301.30 Aligned_cols=247 Identities=19% Similarity=0.247 Sum_probs=197.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.|++.+.||.|++|.||+|.+..+++.||+|.+.... ....+..|+++++.++|.+.+..+..+.......+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4899999999999999999999889999999876433 223477899999999875544433333334456799999
Q ss_pred cc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+.+... ...+++.+++.++.|++.||.+||++|++||||||+||+++ ..+.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEEecccCC
Confidence 99 78999888753 34589999999999999999999999999999999999994 788999999999987644322
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......+++.|+|||++.+..++.++|||||||++|+|++|+.||...+.. .....+....... ..
T Consensus 158 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~----~~ 223 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN---SLVYRIIEGKLPP----MP 223 (257)
T ss_pred -------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHhcCCCC----Cc
Confidence 122456889999999999999999999999999999999999999764332 2222233322211 22
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...++++.+++.+||+.+|++||++.++++
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 224 KDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred cccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 456889999999999999999999998865
No 212
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.2e-39 Score=308.20 Aligned_cols=248 Identities=23% Similarity=0.332 Sum_probs=199.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..+|++.+.||+|+||.||+|.+..+++.|++|.+.... ....+.+|+.+++.+.| +++..+..++......++|||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h-~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCC-CCEeeEEEEEEeCCEEEEeec
Confidence 468999999999999999999999899999999876543 23457889999998876 455566666667889999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++. ...+++.++..++.|++.||.|||++||+||||||+|||+ +.++.++|+|||++.........
T Consensus 98 ~~~~~~L~~~~~--~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~ 172 (296)
T cd06654 98 YLAGGSLTDVVT--ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 172 (296)
T ss_pred ccCCCCHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhccccccc
Confidence 99 889999875 3468999999999999999999999999999999999999 47789999999998765432211
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....+++.|+|||.+.+..++.++|||||||++|+|++|+.||....... ..+. +.... .+......
T Consensus 173 -------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~--~~~~-~~~~~--~~~~~~~~ 240 (296)
T cd06654 173 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR--ALYL-IATNG--TPELQNPE 240 (296)
T ss_pred -------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH--hHHH-HhcCC--CCCCCCcc
Confidence 123468899999999998889999999999999999999999997654321 1111 11111 11111123
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++..+.++|.+||..+|++||++.+|++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 46788999999999999999999999976
No 213
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.9e-39 Score=307.32 Aligned_cols=249 Identities=17% Similarity=0.294 Sum_probs=197.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+.|++.+.||+|+||.||+|.+..++..+++|.+..... ...+.+|+++++.+.| +++..+..++......++||||
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDH-PNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCC-CCeeeEEEEEeeCCEEEEEEEe
Confidence 347899999999999999999999999999998765432 3357789999999986 5565666666778889999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|..++......+++..+..++.||+.||.|||+.|++||||||+|||+ +.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~-- 158 (282)
T cd06643 84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQ-- 158 (282)
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccccccc--
Confidence 9 778877776556679999999999999999999999999999999999999 4788999999999876543221
Q ss_pred cccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 164 HIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
......++..|+|||.+. +..++.++|||||||++|+|++|+.||...... +.+..+...... ..
T Consensus 159 -----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~~~~~~~~~--~~ 228 (282)
T cd06643 159 -----RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM---RVLLKIAKSEPP--TL 228 (282)
T ss_pred -----ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH---HHHHHHhhcCCC--CC
Confidence 122456899999999984 445788999999999999999999999865432 222222222111 11
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++.++.++|.+||+.+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112345889999999999999999999988754
No 214
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=9.9e-39 Score=307.92 Aligned_cols=264 Identities=19% Similarity=0.219 Sum_probs=202.8
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeee--eCCeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGV--DGEDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~--~~~~~~ 79 (423)
..+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|.+.+ .+..+.. ..+..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIV-ELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCc-ceEEEEecCCCCeEE
Confidence 4689999999999999999999999999999998764332 22456899999999885544 4444433 235689
Q ss_pred EEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 80 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 80 lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+||||++++|.+++......+++..++.++.||+.||.|||+.|++||||||+||++ +..+.+||+|||++......
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeecCCc
Confidence 999999889999988766779999999999999999999999999999999999999 47889999999999876543
Q ss_pred CCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc------
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK------ 232 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~------ 232 (423)
... .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.+.......+.......
T Consensus 162 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07845 162 AKP-------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234 (309)
T ss_pred cCC-------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence 211 112345788999999876 457899999999999999999999998755443322222211100
Q ss_pred ----------cCC------chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCC
Q 014544 233 ----------VST------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGY 282 (423)
Q Consensus 233 ----------~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 282 (423)
... .........++.+.++|.+||..||++||++++++. +.+|.+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~--h~~f~~~~~ 298 (309)
T cd07845 235 GFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE--SSYFKEKPL 298 (309)
T ss_pred hhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc--ChhhccCCC
Confidence 000 001111234788999999999999999999999975 566655443
No 215
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.2e-39 Score=309.94 Aligned_cols=257 Identities=20% Similarity=0.311 Sum_probs=200.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..++..||+|.+..... ..++.+|++++..++| +++..+..++...+..+++||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e 79 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNS-PYIVGFYGAFYSDGEISICME 79 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCC-CCCCeEEEEEeeCCEEEEEee
Confidence 479999999999999999999999999999998765432 2347889999999976 566667667778889999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++.. .+.+++..+..++.|++.||.|||+ .+++||||||+|||++ .++.++|+|||++.......
T Consensus 80 y~~~~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 80 HMDGGSLDQVLKK-AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred ccCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCCcccccccc-
Confidence 99 7899998875 3678999999999999999999998 5999999999999994 67889999999987653321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH--------------
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK-------------- 227 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~-------------- 227 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...........+..
T Consensus 155 --------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 155 --------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred --------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccc
Confidence 1245789999999999988899999999999999999999999975432211111100
Q ss_pred ---------------HHhhccCCchHHh-hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 228 ---------------ICEKKVSTPIEVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 228 ---------------i~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
..........+.. ...++.++++|+.+||..+|++||++.+|++ +.++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~--~~~~~~ 292 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK--HPFIKR 292 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhc--Chhhhh
Confidence 0000000000000 0125778999999999999999999999966 455544
No 216
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.9e-39 Score=301.37 Aligned_cols=254 Identities=24% Similarity=0.398 Sum_probs=204.6
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+..++|++.+.||.|+||.||+|.+.. ++.||||.+.... ....+.+|+.+++.+.| +++..+..++......+++|
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~-~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNG-TTKVAVKTLKPGTMSPEAFLQEAQIMKKLRH-DKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcC-CceEEEEEecCCccCHHHHHHHHHHHhhCCC-CCEeeeeeeeecCCceEEEE
Confidence 567899999999999999999999754 5779999877543 34568899999999986 55666666667778899999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++ +++.++|+|||++..+....
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccceeccchh
Confidence 999 789999887533 4689999999999999999999999999999999999994 78999999999998765321
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......++..|+|||.+.+..++.++|||||||++|+|++ |+.||.+.... ..+..+.. ....+.+
T Consensus 158 ~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~---~~~~~~~~-~~~~~~~- 226 (261)
T cd05034 158 YT------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR---EVLEQVER-GYRMPRP- 226 (261)
T ss_pred hh------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHc-CCCCCCC-
Confidence 11 1112334678999999999889999999999999999998 99999875433 22333322 2222211
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
...|.++.+++.+||..+|++||++++|.+.|+.
T Consensus 227 --~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 227 --PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 2348899999999999999999999999988874
No 217
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.1e-39 Score=300.20 Aligned_cols=245 Identities=26% Similarity=0.383 Sum_probs=200.8
Q ss_pred ceeeecCceeEEEEEEcCC---CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||.||+|.+... +..|++|++..... ...+.+|++.+..+.| +++..+..+.......+++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGH-PNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCC-CChheeeeeecCCCceEEEEEecc
Confidence 4789999999999999865 88899999876554 3568899999999984 66666666666788899999999
Q ss_pred CCCHHHHHHHh--------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 86 GPSLEDLFVYC--------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 86 ~~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
+++|.+++... ...+++..++.++.||+.||+|||++|++||||||+||++ +.++.++|+|||.+....
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccccc
Confidence 99999999865 4679999999999999999999999999999999999999 477999999999998765
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
.... +.......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+.. ....+
T Consensus 157 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~~-~~~~~ 227 (262)
T cd00192 157 DDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE---VLEYLRK-GYRLP 227 (262)
T ss_pred cccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHHc-CCCCC
Confidence 4432 112234567889999999998889999999999999999999 699998764432 2222222 11111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
....+|.++.+++.+||..+|.+||++.+|++.|
T Consensus 228 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 228 ---KPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred ---CCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1234488999999999999999999999998876
No 218
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=5.5e-39 Score=305.33 Aligned_cols=255 Identities=23% Similarity=0.330 Sum_probs=201.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEc-----CCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHV-----DTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~-----~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
+...+|.+.++||+|+||.||+|... .++..+|+|.+..... ...+.+|++++..++| +++..+..++....
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~ 80 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQH-QHIVRFYGVCTEGR 80 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCC-CCCceEEEEEecCC
Confidence 45678999999999999999999753 3466799997764432 3458899999999976 56666767777788
Q ss_pred eeEEEEecc-CCCHHHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR--------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~--------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||+|||++|++||||||+|||++ +
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~ 157 (280)
T cd05092 81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---Q 157 (280)
T ss_pred ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---C
Confidence 899999999 889999987532 2488999999999999999999999999999999999994 7
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhh
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAAT 220 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~ 220 (423)
++.+||+|||+++....... +.......+++.|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 158 ~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~ 232 (280)
T cd05092 158 GLVVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE 232 (280)
T ss_pred CCCEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH
Confidence 88999999999976543221 111223345788999999999899999999999999999998 999997654332
Q ss_pred hHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 221 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
.+..+..... .. ....+|+.+.+++.+||+.||++||++++|.+.|+
T Consensus 233 ---~~~~~~~~~~-~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 233 ---AIECITQGRE-LE---RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---HHHHHHcCcc-CC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 2222222111 11 11345889999999999999999999999998775
No 219
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8e-39 Score=304.67 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=196.6
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeee-----eCCee
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DGEDN 78 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~~~~ 78 (423)
..++|++.+.||+|+||.||+|.+..+++.||+|+..... ....+..|+.++..+..|+++..+..++. .+...
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 3578999999999999999999999999999999876533 23457889999999965566666655442 34568
Q ss_pred EEEEecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 79 VLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
++||||+ +++|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+||+++ .++.++|+|||+++
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~ 172 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFGVSA 172 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCCcee
Confidence 9999999 8899888753 234688999999999999999999999999999999999994 67889999999998
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcC-----CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-----IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC 229 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (423)
....... ......|+..|+|||.+.. ..++.++|||||||++|+|++|+.||....... .+..+.
T Consensus 173 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~---~~~~~~ 242 (286)
T cd06638 173 QLTSTRL-------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR---ALFKIP 242 (286)
T ss_pred ecccCCC-------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH---HHhhcc
Confidence 7643221 1124468999999999853 447889999999999999999999998654321 111111
Q ss_pred hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.. ..+.......++..+.++|.+||+.+|++||++.+|++
T Consensus 243 ~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 282 (286)
T cd06638 243 RN--PPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQ 282 (286)
T ss_pred cc--CCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 11 11111112334778999999999999999999999876
No 220
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.4e-39 Score=306.78 Aligned_cols=251 Identities=18% Similarity=0.323 Sum_probs=198.9
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeee------eCCe
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGV------DGED 77 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~------~~~~ 77 (423)
-.+.|++.+.||.|+||.||+|.+..+++.||+|+..... ....+..|+.++..+.+++++..+..++. ....
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~ 93 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ 93 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence 3578999999999999999999999999999999876543 33467889999999976777777765543 2457
Q ss_pred eEEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
.+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||+.||+|+||||+||++ ++++.++|+|||++..
T Consensus 94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQ 170 (282)
T ss_pred EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcchhh
Confidence 89999999 679999887533 458889999999999999999999999999999999999 4788899999999876
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
...... ......|+..|+|||.+. +..++.++|||||||++|||++|..||....... .+..+..
T Consensus 171 ~~~~~~-------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~---~~~~~~~ 240 (282)
T cd06636 171 LDRTVG-------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPR 240 (282)
T ss_pred hhcccc-------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHh---hhhhHhh
Confidence 543221 122457899999999986 3457889999999999999999999997654322 1111111
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. .+.......++.++.++|.+||..||.+||++.+|++
T Consensus 241 ~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 241 N---PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred C---CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1 1111222456889999999999999999999998864
No 221
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=8.2e-39 Score=307.78 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=203.8
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCc----eEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~----~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
..+-.++|++.+.||+|+||.||+|.+..++. .||+|++...... ..+.+|+.++..+.| +++..+..++..
T Consensus 2 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h-~niv~~~~~~~~ 80 (303)
T cd05110 2 RILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH-PHLVRLLGVCLS 80 (303)
T ss_pred cccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCcccEEEEEcC
Confidence 34557889999999999999999999887775 4788987654332 247789999999976 445455444433
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
...++++||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~ 156 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLA 156 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEcccccc
Confidence 3467899999 789999987656678999999999999999999999999999999999999 46788999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+......... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... +..+....
T Consensus 157 ~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~----~~~~~~~~ 227 (303)
T cd05110 157 RLLEGDEKEY-----NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----IPDLLEKG 227 (303)
T ss_pred ccccCccccc-----ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH----HHHHHHCC
Confidence 8764332210 1112345778999999999899999999999999999997 999998754322 22222222
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
...+.. ...+..+.+++..||..+|++||++++|++.|+.+....
T Consensus 228 ~~~~~~---~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 228 ERLPQP---PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 222222 234788999999999999999999999999999876543
No 222
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3e-39 Score=306.85 Aligned_cols=249 Identities=19% Similarity=0.318 Sum_probs=200.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
++|++.+.||.|+||.||+|.+..++..||+|+..... ....+..|+++++.++| +++..+...+......++||||
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKH-PNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCC-CceeEEEEEEecCCeEEEEeec
Confidence 57999999999999999999998889999999876543 23357789999999985 6677777777788899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..++.++.|++.||.|||++||+|+||||+||++ +.++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~-- 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKSTLQ-- 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccccc--
Confidence 9 779998887766779999999999999999999999999999999999999 4788999999999876543221
Q ss_pred cccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 164 HIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
......+++.|+|||.+. +..++.++|||||||++|+|++|+.||...... +.+..+..... +..
T Consensus 159 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~--~~~ 228 (280)
T cd06611 159 -----KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM---RVLLKILKSEP--PTL 228 (280)
T ss_pred -----ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH---HHHHHHhcCCC--CCc
Confidence 122456899999999985 344678999999999999999999999875432 22222222111 111
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++.++.++|..||..+|++||+++++++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 112345789999999999999999999999865
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9.5e-39 Score=300.95 Aligned_cols=251 Identities=25% Similarity=0.369 Sum_probs=200.7
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-----------hhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----------PQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-----------~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
+|.+.+.||.|+||.||+|.+..+++.||+|.+...... ..+.+|+.+++.+.| +++..+..++....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH-ENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCC-CCeeeEEEEEEeCC
Confidence 588999999999999999999888999999977643221 346789999999976 56666777777888
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+++|||+ +++|.+++.. .+.+++..+..++.|++.||+|||++|++||||+|+||++ ++++.++|+|||+++.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNN-YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKK 155 (267)
T ss_pred ccEEEEEecCCCCHHHHHHh-ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCcc
Confidence 999999999 7899998875 4568999999999999999999999999999999999999 4788999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
......... .........|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+..+....
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~--- 228 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL---QAIFKIGENA--- 228 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH---HHHHHHhccC---
Confidence 753221110 011122456889999999999888999999999999999999999999875432 2222222211
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.......++..+.++|.+||+.+|.+||++.+|++
T Consensus 229 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 229 -SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 11222456889999999999999999999998865
No 224
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.8e-39 Score=304.03 Aligned_cols=247 Identities=19% Similarity=0.242 Sum_probs=195.3
Q ss_pred ceeeecCceeEEEEEEcCCCc--eEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNE--IVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~--~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|++..++. .+++|...... ....+.+|++++..+.+|+++..+..++......+++|||+ +
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999987775 46888776432 23457889999999977788888877777888899999999 8
Q ss_pred CCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecc
Q 014544 87 PSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 151 (423)
Q Consensus 87 ~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFG 151 (423)
++|.+++.... ..+++..++.++.|++.||+|||++|++||||||+|||+ +.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECCCC
Confidence 89999986532 247899999999999999999999999999999999999 478899999999
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHh
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
++....... .......+..|+|||.+.+..++.++|||||||++|||++ |..||.+..... .+..+..
T Consensus 158 l~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~~~ 226 (270)
T cd05047 158 LSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYEKLPQ 226 (270)
T ss_pred Cccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH---HHHHHhC
Confidence 986322111 1112234567999999998889999999999999999997 999997654322 2222211
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
..... .....+.++.+++.+||..+|.+||++.+++..|++++
T Consensus 227 -~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -GYRLE---KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -CCCCC---CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11111 11235788999999999999999999999999998875
No 225
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-38 Score=308.22 Aligned_cols=256 Identities=19% Similarity=0.237 Sum_probs=188.0
Q ss_pred eceeeecCceeEEEEEEcC--CCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEee-eeCCeeEEEEeccCCC
Q 014544 12 GRKIGSGSFGEIFLASHVD--TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYG-VDGEDNVLVLDLLGPS 88 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~--~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~-~~~~~~~lv~e~~~~s 88 (423)
+.+||+|+||.||+|++.. ++..||+|.+........+.+|+++++.++|++.+..+..+. ......+++|||++++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~ 85 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHD 85 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCCc
Confidence 4689999999999999764 567899998877666667889999999998865444444333 3456789999999999
Q ss_pred HHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc-CCCCeEEEeeccceeeccCC
Q 014544 89 LEDLFVYCR--------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG-RKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 89 L~~~l~~~~--------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~-~~~~~vkL~DFGla~~~~~~ 159 (423)
|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+++.....
T Consensus 86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~ 165 (317)
T cd07867 86 LWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 165 (317)
T ss_pred HHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCC
Confidence 988875321 248899999999999999999999999999999999999432 35678999999999876543
Q ss_pred CCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh------HHHHHHHHhhc
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK------KQKYDKICEKK 232 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~------~~~~~~i~~~~ 232 (423)
... ........||+.|+|||++.+. .++.++|||||||++|||+||+.||........ ...+..+....
T Consensus 166 ~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 166 LKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred ccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 221 1122355789999999999874 589999999999999999999999975321100 00011110000
Q ss_pred c----------------------------CCc-----hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 V----------------------------STP-----IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~----------------------------~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. ... ........+..+.+||.+||..||.+|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 0 000 00001122456889999999999999999998864
No 226
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9.4e-39 Score=300.14 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=192.9
Q ss_pred ceeeecCceeEEEEEEcC---CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~---~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||.||+|.+.. ....||||.+..... ...+.+|+.+++.++|++.+..+..+.......+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998753 345799998754332 2357789999999887555554443444556688999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++......+++..++.++.||+.||.|||+.+++||||||+|||+ ++.+.+||+|||+++.........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~~-- 155 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYYS-- 155 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCccee--
Confidence 899999987655667888899999999999999999999999999999999 477899999999998654322111
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
........++..|+|||.+.+..++.++|||||||++|||++ |.+||...... .....+.... ..+. ....
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~---~~~~ 227 (262)
T cd05058 156 -VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLLQGR-RLLQ---PEYC 227 (262)
T ss_pred -ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHhcCC-CCCC---CCcC
Confidence 011123456778999999998889999999999999999999 56677654332 2222222211 1111 1234
Q ss_pred hHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
|..+.+++..||..+|++||++.+|+..|++++.
T Consensus 228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 7899999999999999999999999999998864
No 227
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.2e-39 Score=307.89 Aligned_cols=252 Identities=20% Similarity=0.294 Sum_probs=198.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.+|+..+.||+|+||.||++.+..+++.||||.+.... ....+.+|+.++.++..++++..+..+.......+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 46778899999999999999999999999999876543 233578899999999756777777777777888999999
Q ss_pred ccCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 84 LLGPSLEDLFVY----CRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 84 ~~~~sL~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
|++.++.++... ....+++..+..++.|++.||+|||+. +|+||||||+|||++ ..+.++|+|||+++.+..
T Consensus 84 ~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEeecchhHHhcc
Confidence 998888776542 235699999999999999999999975 999999999999994 678999999999976543
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.... ....|+..|+|||.+.+. .++.++|||||||++|+|++|+.||.... ...+.+.++.......
T Consensus 161 ~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~ 230 (288)
T cd06616 161 SIAK--------TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVKGDPPI 230 (288)
T ss_pred CCcc--------ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcCCCCCc
Confidence 3211 134678899999999876 68999999999999999999999997643 1122222222211111
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
........++.++.+||.+||+.+|++||++++|+.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111346889999999999999999999999966
No 228
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.4e-38 Score=303.95 Aligned_cols=254 Identities=21% Similarity=0.266 Sum_probs=197.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+++++.++| +++..+..++.+.+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKH-ANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCC-cceeeEEEEEecCCeEEEEEe
Confidence 689999999999999999999998899999998764332 2346789999999976 566677777778889999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|+.++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~-- 158 (291)
T cd07844 84 YLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVPSK-- 158 (291)
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCCCc--
Confidence 99889999887766678999999999999999999999999999999999999 4788999999999875432211
Q ss_pred cccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-hhHHHHHHHHhhc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-TKKQKYDKICEKK--------- 232 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~~~--------- 232 (423)
......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.... +....+.+.....
T Consensus 159 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 159 -----TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred -----cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhh
Confidence 1113356889999999876 45889999999999999999999999764421 1111111110000
Q ss_pred -------------cCCchHHhhccCh--HHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 -------------VSTPIEVLCKSHP--AEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 -------------~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+.......+. ..+.+++.+||..+|++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0001111112233 78899999999999999999998764
No 229
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=7.3e-39 Score=304.76 Aligned_cols=260 Identities=24% Similarity=0.268 Sum_probs=197.6
Q ss_pred cCceEEeceeeecCceeEEEEEE----cCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEee--eeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYG--VDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~----~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~--~~~~~ 77 (423)
...|++.+.||+|+||.||+|.. ..+++.||||.+..... ...+.+|++++..++|+ ++..+..+. .....
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~ 81 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHD-NIVKYKGVCYSAGRRN 81 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCC-CeeEEEEEEccCCCCc
Confidence 46899999999999999999984 35688899998765443 23578999999999874 455554433 33456
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++||||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++..
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTKVL 158 (284)
T ss_pred eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccccc
Confidence 89999999 899999987655679999999999999999999999999999999999999 47889999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh------------HHH
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK------------KQK 224 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~------------~~~ 224 (423)
....... .......++..|+|||.+.+..++.++|||||||++|||++|..|+........ ...
T Consensus 159 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 159 PQDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred cCCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHH
Confidence 4432210 011122345569999999988899999999999999999998877653221100 000
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+..+.......+ ....++.++.+|+.+||..+|++||++.+|++.|+.+
T Consensus 235 ~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 235 LIELLKNNGRLP---APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHhcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 111111111111 1234578999999999999999999999999998764
No 230
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=9.9e-39 Score=301.41 Aligned_cols=251 Identities=21% Similarity=0.327 Sum_probs=198.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeee------CCee
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVD------GEDN 78 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~------~~~~ 78 (423)
.++|++.+.||+|+||.||+|.+..+++.|++|++..... ...+.+|+.+++.+..++++..+..++.. ....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 4789999999999999999999998899999998775543 35688999999999766777777666544 3358
Q ss_pred EEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 79 VLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
+++|||+ +++|.+++... ...+++..+..++.|++.||.|||++|++|+||+|+||+++ .++.++|+|||++.
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~~~~ 161 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGVSA 161 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCccce
Confidence 9999999 77999888653 35799999999999999999999999999999999999994 78899999999987
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC 229 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (423)
........ .....|+..|+|||.+... .++.++|||||||+||+|++|..||...... ..+..+.
T Consensus 162 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~ 231 (275)
T cd06608 162 QLDSTLGR-------RNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM---RALFKIP 231 (275)
T ss_pred ecccchhh-------hcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH---HHHHHhh
Confidence 65433221 2245688999999988642 3678999999999999999999999764332 2222222
Q ss_pred hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...... . .....++..+.++|.+||..||++||++++|++
T Consensus 232 ~~~~~~-~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 232 RNPPPT-L-KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ccCCCC-C-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 211111 0 111235789999999999999999999999865
No 231
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.3e-39 Score=299.30 Aligned_cols=249 Identities=23% Similarity=0.320 Sum_probs=201.5
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+-.++|++.+.||.|+||.||+|.. .++.||||.+..... ..++.+|+.++..++|. ++..+..+..+....++||
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHP-NLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchhHHHHHHHHHHHHHhcCCc-ceeeeEEEEcCCCCeEEEE
Confidence 3467899999999999999999987 478899998876654 45688999999999874 4555555566678899999
Q ss_pred ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||+ +++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+||++ +.++.++|+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEccccccccccccc
Confidence 999 689999887543 268999999999999999999999999999999999999 478899999999998763322
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
. ....+..|+|||.+.+..++.++||||||+++|+|++ |..||....... ....+ .......
T Consensus 157 ~----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~-~~~~~~~--- 219 (256)
T cd05039 157 D----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VVPHV-EKGYRME--- 219 (256)
T ss_pred c----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH-hcCCCCC---
Confidence 1 2234567999999998889999999999999999997 999998654322 22222 2221111
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.....|+.+.++|.+||..+|++||++++|+..|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 123458999999999999999999999999998864
No 232
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=303.50 Aligned_cols=262 Identities=21% Similarity=0.313 Sum_probs=213.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+.-++|..++.||+|.||.|.+++.+.+++.+|||++++... ...-+.|-++|+..+| +.+..+.+.++..+..
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~H-PFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRH-PFLTSLKYSFQTQDRL 243 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccC-cHHHHhhhhhccCceE
Confidence 445789999999999999999999999999999999876542 2235678888888776 4455566677888999
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|+||||. ||.|.-.+.. .+.|++.....+...|+.||.|||+++||+||||.+|.|+ |.+|++||+|||+++.-.
T Consensus 244 CFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhcc
Confidence 9999999 8888777765 4569999999999999999999999999999999999999 699999999999998654
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.... ..+.++|||.|+|||++....|++++|+|.+||++|||++|++||...+ ....+..|+...+..|
T Consensus 320 ~~g~-------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d---h~kLFeLIl~ed~kFP- 388 (516)
T KOG0690|consen 320 KYGD-------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD---HEKLFELILMEDLKFP- 388 (516)
T ss_pred cccc-------eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccc---hhHHHHHHHhhhccCC-
Confidence 3332 3458999999999999999999999999999999999999999998643 3345555666666665
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCC--hHHHHHHHHHHHHhcCCCCCcceecee
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPD--YGFLKRLFHDLFSREGYDFDFVFDWTI 292 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt--~~~l~~~L~~~~~~~~~~~~~~~dw~~ 292 (423)
..++++.+.|+..+|.+||.+|.. .++..+..+ +.|....||+.
T Consensus 389 ----r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~-------h~FF~~v~W~~ 434 (516)
T KOG0690|consen 389 ----RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR-------HRFFASVDWEA 434 (516)
T ss_pred ----ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh-------hhhhccCCHHH
Confidence 455899999999999999999962 233333222 33445567754
No 233
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.1e-39 Score=300.33 Aligned_cols=246 Identities=21% Similarity=0.273 Sum_probs=197.4
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..++|++.+.||+|+||.||++.. +++.||+|+.........+.+|+.++..++|++.++ +..+... +..+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~-~~~~~~~-~~~~~v~e~ 79 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVR-LLGVILH-NGLYIVMEL 79 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCe-EEEEEcC-CCcEEEEEC
Confidence 346899999999999999999874 678899999877666667899999999998755444 4444433 457999999
Q ss_pred c-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 85 L-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 85 ~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
+ +++|.+++.... ..+++..++.++.|++.||.|||+.|++||||||+||++ +.++.+||+|||++........
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~~~- 155 (254)
T cd05083 80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMGVD- 155 (254)
T ss_pred CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceeccccCC-
Confidence 9 789999987543 358999999999999999999999999999999999999 4778999999999876433211
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
....+..|+|||.+.+..++.++|||||||++|+|++ |+.||........ ...+ ....... ..
T Consensus 156 ---------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~~~~-~~~~~~~---~~ 219 (254)
T cd05083 156 ---------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---KECV-EKGYRME---PP 219 (254)
T ss_pred ---------CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---HHHH-hCCCCCC---CC
Confidence 2234567999999998889999999999999999997 9999987544322 2222 2222211 12
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
..+|..+.+++.+||+.+|++||++++|+..|+
T Consensus 220 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 220 EGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 456889999999999999999999999998875
No 234
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.3e-38 Score=302.53 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=196.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..+++.||||++...... ..+.+|+.+++.+.| +++..+..++......++|||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH-ANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCC-CCEeEEEEEEecCCeEEEEEe
Confidence 6899999999999999999999989999999987654322 256789999999986 556677777778888999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|++++|.+.+......+++..+..++.||+.||.|||+.||+|+||||+|||+ +.++.++|+|||+++........
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~~~- 159 (291)
T cd07870 84 YMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIPSQT- 159 (291)
T ss_pred cccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCCCCC-
Confidence 99989988876555668899999999999999999999999999999999999 47889999999998764332211
Q ss_pred cccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV--------- 233 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~--------- 233 (423)
.....++..|+|||.+.+. .++.++|||||||++|+|++|..||.+.... .+.+.++.....
T Consensus 160 ------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07870 160 ------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDV--FEQLEKIWTVLGVPTEDTWPG 231 (291)
T ss_pred ------CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhH--HHHHHHHHHHcCCCChhhhhh
Confidence 1234578999999998764 4788999999999999999999999865432 122221111000
Q ss_pred ----------------CCchHHhhc--cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 ----------------STPIEVLCK--SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 ----------------~~~~~~~~~--~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......... ..+..+.+++.+||..||.+||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000111111 12568999999999999999999998754
No 235
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.9e-38 Score=301.73 Aligned_cols=254 Identities=22% Similarity=0.286 Sum_probs=202.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.| +++..+..+.......++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQH-PYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCC-CCCcceeeEEecCCeeEEEec
Confidence 5899999999999999999999899999999876543 23468899999999985 566667667777889999999
Q ss_pred ccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 84 LLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 84 ~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
|++++|.+++......+++..++.++.||+.||.|||+.|++|+||||+||+++ ..+.++|+|||++........
T Consensus 80 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 80 YMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred ccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeecccccCCCC--
Confidence 999999999877667799999999999999999999999999999999999994 688999999999987654321
Q ss_pred cccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh-----------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK----------- 231 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~----------- 231 (423)
+......++..|+|||.+.+.. ++.++|||||||++|+|++|..||.+................
T Consensus 155 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 155 ----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccC
Confidence 1122456899999999987544 689999999999999999998888765433222111111100
Q ss_pred -----------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 -----------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 -----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+........+..+.++|.+||..+|++||++++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0001122233456789999999999999999999998865
No 236
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-38 Score=304.90 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=201.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
.+|++.+.||.|+||.||+|.+..+++.|+||.+.... ....+.+|+.+++.++|+ ++..+..+....+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNP-NIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCC-ceeeeeeeEecCceEEEEEEe
Confidence 56999999999999999999999999999999776433 334578899999999874 455566666678899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|..++.. ..+++..++.++.|++.||.|||++|++||||||+||++ +.++.++|+|||++.........
T Consensus 98 ~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~~~~~- 171 (296)
T cd06655 98 LAGGSLTDVVTE--TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITPEQSK- 171 (296)
T ss_pred cCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccccccc-
Confidence 9 8889888763 468999999999999999999999999999999999999 47889999999998765433211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||.+....... ..+.... .+.......
T Consensus 172 ------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~---~~~~~~~--~~~~~~~~~ 240 (296)
T cd06655 172 ------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL---YLIATNG--TPELQNPEK 240 (296)
T ss_pred ------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHhcC--CcccCCccc
Confidence 12446889999999999888999999999999999999999999875432221 1121111 111112245
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
+++.+.++|.+||..+|.+||++.+|+. ++++.
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~--~~~~~ 273 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQ--HPFLK 273 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhh--ChHhh
Confidence 6889999999999999999999999965 45543
No 237
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.1e-38 Score=311.46 Aligned_cols=257 Identities=21% Similarity=0.230 Sum_probs=196.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeee-----eCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~~ 76 (423)
++++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|++ +..+..+.. ...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHEN-IIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCC-cCchhheeecccccccc
Confidence 5689999999999999999999999999999999876422 2334778999999998755 444433322 223
Q ss_pred eeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 77 DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
..+++|||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+|||+ +..+.+||+|||++...
T Consensus 82 ~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 82 DVYIVQELMETDLYKLIK--TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLARIA 156 (336)
T ss_pred eEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECcccceeec
Confidence 579999999989988775 4579999999999999999999999999999999999999 47889999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh-----
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE----- 230 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~----- 230 (423)
........ ......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+..+..
T Consensus 157 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 157 DPEHDHTG----FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred cccccccC----CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 44322111 1224578999999998765 4689999999999999999999999976433221111111110
Q ss_pred ------------------hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 ------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+........++++.++|.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~ 291 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALA 291 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00111122233456788999999999999999999999877
No 238
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.6e-38 Score=298.68 Aligned_cols=254 Identities=22% Similarity=0.372 Sum_probs=200.6
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.+..++|++.+.||+|+||.||+|.+.. +..+|+|.+..... ...+.+|+.+++.+.|.+ +..+..+... ...+++
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~-~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~-~~~~~v 78 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNK-HTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDK-LVKLHAVVTK-EPIYII 78 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecC-CccEEEEecCCChhHHHHHHHHHHHHHhcCCCC-cceEEEEEcC-CCeEEE
Confidence 3678899999999999999999998654 55699998765432 346889999999998754 4445444444 678999
Q ss_pred Eecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||+ +++|.+++... ...+++..++.++.|++.||.|||+.|++||||||+||++ +..+.+||+|||++..+...
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeeccCC
Confidence 9999 78999998753 3457889999999999999999999999999999999999 47889999999999876432
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
... ......++..|+|||.+.+..++.++|||||||++|++++ |..||.+.+...... .+. .....+
T Consensus 156 ~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~---~~~-~~~~~~-- 223 (260)
T cd05073 156 EYT------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR---ALE-RGYRMP-- 223 (260)
T ss_pred Ccc------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHH---HHh-CCCCCC--
Confidence 211 1122345678999999998889999999999999999999 999998754432222 221 222222
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
.....|.++.+++.+||..+|++||++.+|.+.|+.
T Consensus 224 -~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 -RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 124568899999999999999999999999998875
No 239
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=343.06 Aligned_cols=263 Identities=25% Similarity=0.343 Sum_probs=217.1
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+-..+|+|++.||+|+||+|.+++++.+++.||+|++++.. ...-|..|-.+|..-. ..-|..+++.+.+..+.
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYL 150 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccce
Confidence 44578999999999999999999999999999999987632 2223556666665433 46677778888999999
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|+||||+ ||+|..++.... .+++..+..++..|+.||.-||+.|+|||||||+|||+ |..|++||+|||.+..+.
T Consensus 151 YlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~ 226 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMD 226 (1317)
T ss_pred EEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcC
Confidence 9999999 999999998766 89999999999999999999999999999999999999 699999999999998887
Q ss_pred CCCCCCcccccCCCCcccccCccccchhc----C-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh-
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHL----G-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK- 231 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~- 231 (423)
.+.... ....+|||.|.|||++. + +.|++.+|+||+||++|||+.|..||... ...+.|.+|+..
T Consensus 227 ~dG~V~------s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad---slveTY~KIm~hk 297 (1317)
T KOG0612|consen 227 ADGTVR------SSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD---SLVETYGKIMNHK 297 (1317)
T ss_pred CCCcEE------eccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH---HHHHHHHHHhchh
Confidence 665543 33679999999999996 3 46899999999999999999999999864 445777778776
Q ss_pred -ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC---hHHHHHHHHHHHHhcCCCCCcceeceecc
Q 014544 232 -KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLKRLFHDLFSREGYDFDFVFDWTILK 294 (423)
Q Consensus 232 -~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~~l~~~L~~~~~~~~~~~~~~~dw~~~~ 294 (423)
.+.+|... .++.+.++||...+. +|+.|.. ++++. .+.|....||..++
T Consensus 298 ~~l~FP~~~---~VSeeakdLI~~ll~-~~e~RLgrngiedik----------~HpFF~g~~W~~iR 350 (1317)
T KOG0612|consen 298 ESLSFPDET---DVSEEAKDLIEALLC-DREVRLGRNGIEDIK----------NHPFFEGIDWDNIR 350 (1317)
T ss_pred hhcCCCccc---ccCHHHHHHHHHHhc-ChhhhcccccHHHHH----------hCccccCCChhhhh
Confidence 45555222 369999999999885 7888877 66653 35677777896543
No 240
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=4.7e-39 Score=306.31 Aligned_cols=259 Identities=23% Similarity=0.270 Sum_probs=197.1
Q ss_pred CceEEeceeeecCceeEEEEEE----cCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeee--CCe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASH----VDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVD--GED 77 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~----~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~~ 77 (423)
.-|++.+.||+|+||.||+|++ ..++..||+|.+..... ...+.+|+.+++.+.|++ +..+..++.. ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~ 82 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN-IVKYKGICTEDGGNG 82 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCC-eeeeeeEEecCCCCc
Confidence 4579999999999999999985 35678899998764432 235788999999998754 4444444433 356
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.++||||+ +++|.+++......+++..++.++.||+.||+|||++|++||||||+|||++ .++.++|+|||+++.+
T Consensus 83 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 83 IKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAI 159 (284)
T ss_pred eEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCcccccc
Confidence 89999999 8999999876555689999999999999999999999999999999999994 6789999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-----------hhHHHH
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-----------TKKQKY 225 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-----------~~~~~~ 225 (423)
....... .......++..|+|||.+.+..++.++|||||||++|+|+++..|+...... ......
T Consensus 160 ~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEYY----TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccce----eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 5432211 1122456778899999999888999999999999999999987765321100 000111
Q ss_pred HHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 226 DKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 226 ~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
..........+ ....++..+.+|+.+||+.+|++||++++|++.|+++
T Consensus 236 ~~~~~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 11111111111 1234688999999999999999999999999999876
No 241
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.2e-39 Score=305.15 Aligned_cols=256 Identities=17% Similarity=0.251 Sum_probs=200.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||+|+||.||+|.+..+++.||+|.+..... ...+.+|+.++..+.| +++..+..++......++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e 79 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVS-PYIVDFYGAFFIEGAVYMCME 79 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCC-CcHHhhhhheecCCeEEEEEe
Confidence 478999999999999999999998999999998765322 3457889999999976 555556556667788999999
Q ss_pred cc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 84 LL-GPSLEDLFVYC--RRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~-~~sL~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+ +++|..++... ...+++..+..++.||+.||.|||+ .||+||||||+||+++ ..+.++|+|||++..+...
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 80 YMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred ecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecCCcccccCC
Confidence 99 77888877643 2368999999999999999999997 5999999999999994 6889999999998765432
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCC------CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIE------QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
.. ....++..|+|||.+.+.. ++.++|||||||++|+|++|+.||...........+..+.....
T Consensus 157 ~~---------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 227 (286)
T cd06622 157 LA---------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP 227 (286)
T ss_pred cc---------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence 21 2346788999999986543 58899999999999999999999976443322222222222211
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
......++.++.++|.+||..+|++||++++|+. ..++....
T Consensus 228 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~--~~~~~~~~ 269 (286)
T cd06622 228 ----PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE--HPWLVKYK 269 (286)
T ss_pred ----CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc--Chhhhhcc
Confidence 1122345889999999999999999999999976 55555444
No 242
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.5e-38 Score=303.90 Aligned_cols=235 Identities=25% Similarity=0.379 Sum_probs=197.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.+.| +++..+..++......++|
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRH-PFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCC-CCccceeeEEEcCCeEEEE
Confidence 47999999999999999999999999999999876432 23457889999999985 6676777777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+|+||+|+|||+ +.++.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~~ 155 (290)
T cd05580 80 MEYVPGGELFSHLRK-SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGRT 155 (290)
T ss_pred EecCCCCCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCCC
Confidence 9999 9999998875 4679999999999999999999999999999999999999 478899999999998764431
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
....+++.|+|||.+.+..++.++||||||+++|+|++|..||..... ......+.......+
T Consensus 156 ----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~---- 218 (290)
T cd05580 156 ----------YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEKILEGKVRFP---- 218 (290)
T ss_pred ----------CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcCCccCC----
Confidence 245688999999999988899999999999999999999999976542 233333433333222
Q ss_pred hccChHHHHHHHHHHHcCCCCCCC
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRP 264 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RP 264 (423)
..++..++++|.+||..+|.+|+
T Consensus 219 -~~~~~~l~~li~~~l~~~p~~R~ 241 (290)
T cd05580 219 -SFFSPDAKDLIRNLLQVDLTKRL 241 (290)
T ss_pred -ccCCHHHHHHHHHHccCCHHHcc
Confidence 34588999999999999999998
No 243
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.4e-39 Score=311.08 Aligned_cols=254 Identities=18% Similarity=0.217 Sum_probs=191.8
Q ss_pred Eeceeeec--CceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 11 LGRKIGSG--SFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 11 i~~~Lg~G--~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+++.||+| +|++||+++++.+++.||||.+..... ...+.+|+.+++.++| +++..+..++...+..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h-pniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNH-PNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCC-CCeeeEEEEEEECCEEEEEEec
Confidence 57889999 789999999999999999998875432 2346779999998876 5666677777788899999999
Q ss_pred c-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 85 L-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 85 ~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
+ +++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++.++|+||+.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchhhcccccccc
Confidence 9 78999998653 34589999999999999999999999999999999999994 7789999999876544322111
Q ss_pred CcccccCCCCcccccCccccchhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC-----
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST----- 235 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~----- 235 (423)
............++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ...........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM---LLEKLNGTVPCLLDTT 234 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH---HHHHhcCCcccccccc
Confidence 1000011123456788999999976 4589999999999999999999999986443211 11111110000
Q ss_pred --c----------------------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 --P----------------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 --~----------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+ .......+++.+.+||.+||+.||++||++++|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 00011234678999999999999999999999976
No 244
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.1e-38 Score=300.64 Aligned_cols=254 Identities=21% Similarity=0.305 Sum_probs=199.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
+|+..+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++| +++..+..+..+.+..+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNH-PHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCC-CceehhhceeccCCeEE
Confidence 5889999999999999999999999999999876433 13457889999999987 45555556666778899
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
+||||+ +++|.+++.. .+.+++..++.++.||+.||.|||++|++|+||+|+||+++ .....++|+|||++.....
T Consensus 80 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 80 LFVEWMAGGSVSHLLSK-YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEEeccCCCcHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccccccccccc
Confidence 999999 7899998875 45789999999999999999999999999999999999994 2234799999999987654
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
....... ......++..|+|||.+.+..++.++|||||||++|+|++|..||..............+...... .
T Consensus 157 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~ 230 (268)
T cd06630 157 KGTGAGE---FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTA---P 230 (268)
T ss_pred ccccCCc---cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCC---C
Confidence 3221110 122456889999999999888999999999999999999999999754332222222222111111 1
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+++++.+++.+||..+|++||++.+|+.
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 222345789999999999999999999999864
No 245
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.8e-38 Score=297.59 Aligned_cols=247 Identities=23% Similarity=0.302 Sum_probs=193.8
Q ss_pred ceeeecCceeEEEEEEcCCC---ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVDTN---EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~---~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
++||+|+||.||+|.+...+ ..||+|.+..... ...+..|+.+++.+.|. ++..+..+. ..+..+++|||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~-~iv~~~~~~-~~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHP-CIVRLIGVC-KGEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCC-CeeeEEEEE-cCCceEEEEEeCC
Confidence 47999999999999886554 7899998775543 34578899999999874 454554443 345689999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+|||+ +.++.+||+|||+++........
T Consensus 79 ~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 79 LGPLLKYLKK-RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CCcHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcc---
Confidence 7899999875 3479999999999999999999999999999999999999 47889999999999876543221
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
+.......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+... ...+ ....+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~---~~~~~~~~-~~~~---~~~~~ 223 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE---VIAMLESG-ERLP---RPEEC 223 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH---HHHHHHcC-CcCC---CCCCC
Confidence 111122234568999999998889999999999999999998 999998754432 22222221 1111 12345
Q ss_pred hHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+..+.++|.+||..+|++||++.+|.+.|+.+
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 88999999999999999999999999998865
No 246
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=314.95 Aligned_cols=256 Identities=22% Similarity=0.317 Sum_probs=199.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-eeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE-DNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~-~~~lv~e 83 (423)
+.|.-...||+|+||.||+|...+ +..||||.+..... ..+|..|+.++..++| +|+..+..|+.+.+ ..+||+|
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H-~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQGEREFLNEVEILSRLRH-PNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcchhHHHHHHHHHhcCCC-cCcccEEEEEecCCceEEEEEE
Confidence 456677899999999999999755 48899998776654 4669999999999995 66777777777777 5999999
Q ss_pred cc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 84 LL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRG---FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LHs~g---iiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
|+ .|+|.+.+..... .++|..++.|+.++|.||+|||... ||||||||+|||+ |.+..+||+|||+|+....
T Consensus 153 ym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred ccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcccCCc
Confidence 99 8999999986555 8999999999999999999999854 9999999999999 6899999999999966543
Q ss_pred -CCCCCcccccCCCCc-ccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhh---hHH---------H
Q 014544 159 -PTTNRHIPYRENKNL-TGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT---KKQ---------K 224 (423)
Q Consensus 159 -~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~---~~~---------~ 224 (423)
.... ... .||..|+|||.+.....+.|+||||||++|.||++|+.|........ ... .
T Consensus 230 ~~~~~--------~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~ 301 (361)
T KOG1187|consen 230 GDTSV--------STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGK 301 (361)
T ss_pred cccce--------eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcc
Confidence 2211 112 79999999999998889999999999999999999998886432111 111 1
Q ss_pred HHHHHhhccC-CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 225 YDKICEKKVS-TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 225 ~~~i~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
+..+++..+. ...... ..-..+..+...|++.+|.+||++.++++.|+.+.
T Consensus 302 ~~eiiD~~l~~~~~~~~--~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 302 LREIVDPRLKEGEYPDE--KEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred hhheeCCCccCCCCChH--HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 1222222211 000000 01224778888999999999999999988886554
No 247
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3e-38 Score=298.32 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=203.0
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCC---CceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
+-..+|.+.+.||+|+||.||+|.+... ...|+||....... .+.+.+|+.+++.+.|.+ +..+..+.. ...
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~-i~~~~~~~~-~~~ 80 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPH-IVKLIGVIT-ENP 80 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCc-hhceeEEEc-CCC
Confidence 4467899999999999999999987644 34689998765442 335888999999998754 544544443 355
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++|||+ +++|.+++......+++..++.++.||+.||+|||+.|++||||||+|||++ ..+.++|+|||+++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSRYL 157 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceeeec
Confidence 78999999 8899999976556799999999999999999999999999999999999994 6789999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
...... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.+..... ....+.... ..
T Consensus 158 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~---~~~~~~~~~-~~ 227 (270)
T cd05056 158 EDESYY------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND---VIGRIENGE-RL 227 (270)
T ss_pred ccccce------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHHcCC-cC
Confidence 543211 1112334568999999988889999999999999999986 999998765432 222222211 11
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
+ ....+|..+.++|.+||..+|++||++.++++.|+++..+
T Consensus 228 ~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 228 P---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 1 1245688999999999999999999999999999988654
No 248
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.2e-38 Score=303.52 Aligned_cols=253 Identities=21% Similarity=0.265 Sum_probs=197.7
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-------hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-------PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-------~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|+++++.++| +++..+..++.+....++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH-PNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCC-CCChhhhheeecCCEEEE
Confidence 589999999999999999999988999999987654322 346779999999986 555556566666888999
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||||++++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||+ +.++.++|+|||+++......
T Consensus 80 v~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 80 VFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred EEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCCC
Confidence 99999999999987543469999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh--------
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK-------- 231 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-------- 231 (423)
.. .....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+................
T Consensus 157 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 157 RK-------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred cc-------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 21 123356788999999865 45789999999999999999998888765433222221111000
Q ss_pred ------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 ------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+........+..+.++|..||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0011112223445788999999999999999999999976
No 249
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-40 Score=294.34 Aligned_cols=266 Identities=21% Similarity=0.344 Sum_probs=213.5
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCch---hHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP---QLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~---~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+.+++..||.|+.|+||+++.+.+|...|||.+......+ +++..+.++..-..++.|+.-..|+......+|.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 4456788999999999999999999999999887665443 4667777777666678888888888899999999999
Q ss_pred cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+...+..++....+.+++..+-.+...++.||.||-. +||||||+||+|||+ |..|.+||||||++-.+.+....
T Consensus 173 Ms~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdSkAh- 248 (391)
T KOG0983|consen 173 MSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDSKAH- 248 (391)
T ss_pred HHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeeccccc-
Confidence 9988999998888889999999999999999999986 589999999999999 68999999999999887765533
Q ss_pred cccccCCCCcccccCccccchhcCC---CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI---EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~---~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
....|.+.|||||.+.-. .|+.++||||||++++||.||..||.+.+ ...+.+.++.+... |.-..
T Consensus 249 -------trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~--tdFe~ltkvln~eP--P~L~~ 317 (391)
T KOG0983|consen 249 -------TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK--TDFEVLTKVLNEEP--PLLPG 317 (391)
T ss_pred -------ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC--ccHHHHHHHHhcCC--CCCCc
Confidence 355789999999998743 58999999999999999999999999854 23344555555222 21111
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceec
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 290 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw 290 (423)
-..+++.|.+|+..||.+|+.+||.+.+|++ +.++....-...++-+|
T Consensus 318 ~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~--h~Fi~~ye~a~~dVa~W 365 (391)
T KOG0983|consen 318 HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE--HPFIKRYETAEVDVASW 365 (391)
T ss_pred ccCcCHHHHHHHHHHhhcCcccCcchHHHhc--CcceeecchhhccHHHH
Confidence 2347899999999999999999999999876 34433332222334455
No 250
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-38 Score=303.98 Aligned_cols=251 Identities=18% Similarity=0.301 Sum_probs=199.7
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
-.++|++.+.||+|+||+||+|.+..+++.||+|+...... ...+.+|++++..++| +++..+..+.......++|
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRS-PYIVSFYGAFLNENNICMC 81 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCC-CCcceEeeeEecCCEEEEE
Confidence 35789999999999999999999999999999998764432 3457899999999975 6666677777777899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||+ +++|.+++.. .+.+++..+..++.|++.||.|||+ .+++||||||+||++ ++++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 82 MEFMDCGSLDRIYKK-GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred EecCCCCCHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh
Confidence 9999 7888887765 4568999999999999999999997 699999999999999 47889999999998755332
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-----h---hHHHHHHHHhh
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-----T---KKQKYDKICEK 231 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-----~---~~~~~~~i~~~ 231 (423)
.. ....|+..|+|||++.+..++.++|||||||++|+|++|..||...... . ....+..+...
T Consensus 158 ~~---------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd06620 158 IA---------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE 228 (284)
T ss_pred cc---------CccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc
Confidence 21 1457899999999998888999999999999999999999999864331 0 11112222111
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
..... ....+|..+.+|+.+||..||++||+++++++.
T Consensus 229 ~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 229 PPPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred cCCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11110 011257889999999999999999999998764
No 251
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.6e-38 Score=312.49 Aligned_cols=254 Identities=21% Similarity=0.262 Sum_probs=195.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee-----e
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----D 74 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~ 74 (423)
.+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.++|.+.+..+..+.. +
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 45789999999999999999999999999999999876432 22356789999999987554444443322 2
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....|+||||+.++|.+.+.. .++...+..++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQM---DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 166 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCccce
Confidence 235799999999899888753 38999999999999999999999999999999999999 478899999999998
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh---
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK--- 231 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 231 (423)
....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.......+......
T Consensus 167 ~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 167 TAGTSFM--------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred eCCCCCC--------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 7643321 12346789999999999999999999999999999999999999865432211111110000
Q ss_pred ----------------ccC---CchHHh-------------hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 ----------------KVS---TPIEVL-------------CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ----------------~~~---~~~~~~-------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
... .+.... ....+..+.++|.+||..||++||++.+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 000000 1134667899999999999999999999965
No 252
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.2e-38 Score=301.59 Aligned_cols=251 Identities=19% Similarity=0.288 Sum_probs=196.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeC-----CeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDG-----EDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~-----~~~~ 79 (423)
.++|++.+.||+|+||.||+|.+..+++.+|+|++.... ....+..|+.++..+.+++++..+..++... ...+
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 478999999999999999999999999999999886543 2345778999999996667777765554432 4589
Q ss_pred EEEecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 80 LVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
+||||+ +++|.+++.. ....+++..++.++.|++.||+|||++|++||||||+||++ +.++.+||+|||++..
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVDFGVSAQ 177 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEeecccchh
Confidence 999999 8899988753 24568999999999999999999999999999999999999 4778899999999886
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
....... .....|+..|+|||.+... .++.++|||||||++|+|++|+.||...... ..+..+..
T Consensus 178 ~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~---~~~~~~~~ 247 (291)
T cd06639 178 LTSTRLR-------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV---KTLFKIPR 247 (291)
T ss_pred ccccccc-------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH---HHHHHHhc
Confidence 5432211 1234688999999998643 2688999999999999999999999865432 22222222
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..... ......++..+.++|.+||+.+|++||++.+|++
T Consensus 248 ~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 248 NPPPT--LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCCC--CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11110 0111234678999999999999999999999865
No 253
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1e-38 Score=303.07 Aligned_cols=260 Identities=23% Similarity=0.305 Sum_probs=203.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcC----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeee--CC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVD----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVD--GE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~ 76 (423)
...|++.+.||+|+||.||+|.+.. ++..||||++..... ...+.+|+++++.+.| +++..+..++.. ..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~-~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDH-ENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCC-CChheEEeeeecCCCC
Confidence 4578899999999999999998653 478899998876554 4568899999999976 455566555544 55
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+++|||+ +++|.+++......+++..++.++.||+.||+|||++|++|+||||+||++ +.++.++|+|||++..
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAKV 158 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccccccc
Confidence 789999999 889999998655579999999999999999999999999999999999999 4779999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhh-----------hHHH
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT-----------KKQK 224 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~-----------~~~~ 224 (423)
....... +.......++..|+|||.+.+..++.++|||||||++|||++|..||....... ....
T Consensus 159 ~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05038 159 LPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234 (284)
T ss_pred cccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHH
Confidence 6533221 111112345667999999998889999999999999999999999987532211 0111
Q ss_pred HHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 225 YDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 225 ~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
+..........+. ...+|.++.+++.+||..+|++||++.+|++.|+.+
T Consensus 235 ~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 LLELLKEGERLPR---PPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHcCCcCCC---CccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2222222222221 134478999999999999999999999999998865
No 254
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.7e-38 Score=293.82 Aligned_cols=247 Identities=24% Similarity=0.301 Sum_probs=203.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||.|+||.||.+++..+++.|++|.+.... ....+.+|+.+++.++| +++..+..++.+....+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQH-PNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCC-CCeeEEEeEEecCCeEEEEEE
Confidence 5999999999999999999999999999999765432 23457889999999976 567677777777889999999
Q ss_pred cc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++ .++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceEEcccccc
Confidence 99 88999988754 34689999999999999999999999999999999999994 778899999999987654332
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. .....++..|+|||.+.+..++.++|||||||++|+|++|..||...... +....+........ .
T Consensus 157 ~-------~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~----~ 222 (256)
T cd08221 157 M-------AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL---NLVVKIVQGNYTPV----V 222 (256)
T ss_pred c-------ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHcCCCCCC----c
Confidence 1 12456899999999999888999999999999999999999999764332 33333433332221 1
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
..++.++.+++.+||..+|++||+++++++.
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 4558899999999999999999999998764
No 255
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.5e-38 Score=295.94 Aligned_cols=246 Identities=21% Similarity=0.276 Sum_probs=199.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|.+..+++.+|||.+.... ....+..|+++++.++| +++..+..........++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSH-PNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCC-CchhheeeeEecCCEEEEEEe
Confidence 6999999999999999999999999999999876542 23457889999999986 455556556667788999999
Q ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++.... ..+++..++.++.|++.||.|||++|++|+||+|+||+++ ++.+.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCcc
Confidence 99 789999987543 4589999999999999999999999999999999999995 3456789999999987654322
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
.....++..|+|||.+.+..++.++||||||+++|+|++|..||...... .....+...... ...
T Consensus 158 --------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~ 222 (256)
T cd08220 158 --------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP---ALVLKIMSGTFA----PIS 222 (256)
T ss_pred --------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH---HHHHHHHhcCCC----CCC
Confidence 12456889999999999888999999999999999999999999765432 222223222211 122
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++.++.+++.+||..+|++||++.+|+.
T Consensus 223 ~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 223 DRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 346889999999999999999999999865
No 256
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.3e-38 Score=301.42 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=195.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.+.| +++..+..++......++||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH-ENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCC-cchhhHHHhcccCCeEEEEE
Confidence 479999999999999999999998899999998654332 3357789999999976 55666666667788899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+.+.+.+.+......+++..++.++.||+.||.|||+.|++|+||+|+||++ ++++.++|+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~~ 156 (286)
T cd07846 80 EFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEV 156 (286)
T ss_pred ecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCccc
Confidence 999554444444334569999999999999999999999999999999999999 47889999999999876443221
Q ss_pred CcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh----------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK---------- 231 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 231 (423)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.||......+....+......
T Consensus 157 -------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 157 -------YTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred -------cCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhc
Confidence 1234678999999998764 4788999999999999999999999764432221111111000
Q ss_pred -------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 -------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 -------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+.......++..+.+++.+||..+|++||++.+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0001111223466889999999999999999999998865
No 257
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.3e-38 Score=305.10 Aligned_cols=255 Identities=21% Similarity=0.307 Sum_probs=202.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.+|++.+.||+|+||.||+|.+..+++.||||.+...... ..+..|++++..+.| ++++.+...+......+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDH-PFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCC-CCchhheeeeecCCEEEEE
Confidence 4799999999999999999999999999999987754322 347889999999986 5666676777778889999
Q ss_pred Eecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|||+ +++|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||++ +.++.++|+|||++......
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhccccc
Confidence 9999 88999988753 3568999999999999999999999999999999999999 46789999999998765332
Q ss_pred CCCCcc----------------------cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCch
Q 014544 160 TTNRHI----------------------PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 217 (423)
Q Consensus 160 ~~~~~~----------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~ 217 (423)
...... .-.......||..|+|||++.+..++.++|||||||++|+|++|+.||.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 111000 0001124578999999999999889999999999999999999999998654
Q ss_pred hhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC----hHHHHH
Q 014544 218 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD----YGFLKR 271 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt----~~~l~~ 271 (423)
.. ..+..+.......+.. ..++..+.++|.+||..+|++||+ +++|+.
T Consensus 237 ~~---~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD---ETFSNILKKEVTFPGS---PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH---HHHHHHhcCCccCCCc---cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 32 3333343333332221 125889999999999999999999 666644
No 258
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-38 Score=304.79 Aligned_cols=270 Identities=21% Similarity=0.327 Sum_probs=210.4
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+..++|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|+.++..+..+++++.+..++.+....++
T Consensus 12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 445789999999999999999999998899999998865432 23456777777777767788888888888889999
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+|||+++++.+++......+++..+..++.||+.||.|||+ .||+||||+|+||++ +.++.+||+|||++..+...
T Consensus 92 v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 92 CMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred EeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhccCC
Confidence 99999989999887766789999999999999999999997 599999999999999 47889999999998765432
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCC----CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIE----QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
... ....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||...... .+.+..+.......
T Consensus 169 ~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~ 238 (296)
T cd06618 169 KAK--------TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE--FEVLTKILQEEPPS 238 (296)
T ss_pred Ccc--------cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH--HHHHHHHhcCCCCC
Confidence 211 1335788999999997654 788999999999999999999999753221 22233333222111
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceec
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 290 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw 290 (423)
. + ....++.++.+|+.+||..||++||+++++++ ..++.......+...+|
T Consensus 239 ~-~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~~~~~~~~~~~ 289 (296)
T cd06618 239 L-P-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ--HPFIRRYETAEVDVAGW 289 (296)
T ss_pred C-C-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhc--ChhhhccchhHHHHHHH
Confidence 1 0 11235789999999999999999999999976 45555555444444444
No 259
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-38 Score=305.03 Aligned_cols=248 Identities=23% Similarity=0.321 Sum_probs=199.1
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..+|++.+.||+|+||.||+|.+..+++.||+|.+.... ....+.+|+.+++.+.| +++..+..++......++|||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e 96 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN-PNIVNYLDSYLVGDELWVVME 96 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCEEEEeec
Confidence 478999999999999999999999899999999876533 23457789999988876 556666666677888999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++.. ..+++..+..++.|++.||.|||+.|++||||||+|||+ +.++.++|+|||++.........
T Consensus 97 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred ccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEccCCccC
Confidence 99 8899998763 468999999999999999999999999999999999999 47889999999999765433221
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....+++.|+|||.+.+..++.++|||||||++|+|++|..||....... ....+... ..+......
T Consensus 172 -------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~---~~~~~~~~--~~~~~~~~~ 239 (297)
T cd06656 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR---ALYLIATN--GTPELQNPE 239 (297)
T ss_pred -------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch---heeeeccC--CCCCCCCcc
Confidence 124468899999999999889999999999999999999999997643321 11111111 111111123
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++..+.+++.+||..+|++||++++|++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 45788999999999999999999999876
No 260
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.5e-38 Score=301.78 Aligned_cols=254 Identities=21% Similarity=0.313 Sum_probs=201.1
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
-.++|++.+.||+|+||.||+|.+.. ++..||+|++..... ...+.+|+.++..+.| +++..+..++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h-~~iv~~~~~~~~~~ 81 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDH-PNIVKLLGVCAVGK 81 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCC-CchheEEEEEcCCC
Confidence 35789999999999999999998753 577899998875433 3457889999999976 56666766777778
Q ss_pred eeEEEEecc-CCCHHHHHHHhc---------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCce
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR---------------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNF 134 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~---------------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NI 134 (423)
..+++|||+ +++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni 161 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC 161 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence 899999999 789999986421 2478889999999999999999999999999999999
Q ss_pred EEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCC
Q 014544 135 LMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPW 213 (423)
Q Consensus 135 Ll~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf 213 (423)
|+ +.++.++|+|||++......... ........+..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus 162 l~---~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~ 233 (288)
T cd05050 162 LV---GENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPY 233 (288)
T ss_pred Ee---cCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 99 47889999999998765433211 11123345678999999998899999999999999999997 88999
Q ss_pred CCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 214 QGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
.+.... +....+...... + .....|.++.+++.+||+.+|++||++.+|++.|+
T Consensus 234 ~~~~~~---~~~~~~~~~~~~-~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 234 YGMAHE---EVIYYVRDGNVL-S---CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCHH---HHHHHHhcCCCC-C---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 765433 222333222221 1 12345889999999999999999999999998876
No 261
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.1e-38 Score=307.28 Aligned_cols=252 Identities=23% Similarity=0.260 Sum_probs=198.0
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+.++|++.+.||.|+||.||+|.+..+++.||||.+... .....+..|++++..+.|++.+.....+.......++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 578899999999999999999999999999999976532 2234578899999999875544433444444667899
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
+|||++++|.+++. ...++...+..++.||+.||.|||++||+||||+|+|||+ +..+.++|+|||++.......
T Consensus 88 v~e~~~~~L~~~~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~~~ 162 (328)
T cd07856 88 VTELLGTDLHRLLT--SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDPQM 162 (328)
T ss_pred EeehhccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCCCc
Confidence 99999999988876 3468889999999999999999999999999999999999 478899999999987543211
Q ss_pred CCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH----------
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC---------- 229 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~---------- 229 (423)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+.+..
T Consensus 163 ----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 163 ----------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred ----------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 13467889999998876 568999999999999999999999997654322111111110
Q ss_pred -------------hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 -------------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 -------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......+.......+++.+.++|.+||+.+|++||++++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111122333444567889999999999999999999999866
No 262
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.9e-38 Score=303.29 Aligned_cols=258 Identities=20% Similarity=0.294 Sum_probs=201.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.|+||.+.... ....+.+|+++++.++| ++++.+...+......++|
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAEN-PFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCC-CCeeeeEEEEecCCEEEEE
Confidence 47999999999999999999999999999999876543 12346789999998876 5666666667777889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ +++|.+++.. .+.+++..+..++.|++.||.|||++|++||||||+||++ +..+.++|+|||+++......
T Consensus 80 ~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 80 MEYVEGGDCATLLKN-IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCc
Confidence 9999 7899998865 4568999999999999999999999999999999999999 478899999999987422111
Q ss_pred CCCc--------ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 161 TNRH--------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 161 ~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
.... ..........++..|+|||.+.+..++.++|||||||++|||++|..||.+.... +.+..+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~---~~~~~~~~~~ 232 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISDD 232 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHhcc
Confidence 1000 0000112346788999999999888999999999999999999999999865432 3333333332
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
...+... ..+|.++.++|.+||+.+|++||+...+.++++
T Consensus 233 ~~~~~~~--~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 233 IEWPEGD--EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred cCCCCcc--ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 2222211 246889999999999999999999776666554
No 263
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-38 Score=303.92 Aligned_cols=263 Identities=24% Similarity=0.265 Sum_probs=198.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeee-------e
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGV-------D 74 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~-------~ 74 (423)
-++|++.+.||+|+||.||+|.+..+++.||||++..... ...+.+|+++++.++|++.+..+..+.. .
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4799999999999999999999999999999997754322 2356889999999987554444333222 2
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....++||||++++|...+......+++..+..++.||+.||.|||++||+||||||+|||+ ++++.++|+|||+++
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCccch
Confidence 33579999999889988887656679999999999999999999999999999999999999 578899999999998
Q ss_pred eccCCCCCCcc----cccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH
Q 014544 155 KYRDPTTNRHI----PYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC 229 (423)
Q Consensus 155 ~~~~~~~~~~~----~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (423)
........... .........+++.|+|||.+.+. .++.++|||||||++|+|++|+.||.+.......+.+....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 66443221110 01112345678899999988754 47899999999999999999999998755543333322221
Q ss_pred hhc----------------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 EKK----------------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 ~~~----------------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
... ...........+++.+.++|.+||..||.+||++.+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 110 001111122334578899999999999999999988764
No 264
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=4.5e-38 Score=293.49 Aligned_cols=244 Identities=20% Similarity=0.304 Sum_probs=193.0
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
+.||+|+||.||+|... ++..||+|++..... ...+.+|+++++.+.| +++..+..++......++||||+ +++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDH-PNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCC-CCcCeEEEEEecCCccEEEEECCCCCc
Confidence 46899999999999864 578899998765433 2347789999999976 55666666667778899999999 899
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++......+++..++.++.|++.||.|||++|++||||||+||++ +.++.+||+|||++.........
T Consensus 79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~------ 149 (250)
T cd05085 79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYS------ 149 (250)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccc------
Confidence 999887655678999999999999999999999999999999999999 47889999999998754332211
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
......++..|+|||.+.+..++.++||||||+++|++++ |..||.+........ .+. ..... .....+|..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~---~~~-~~~~~---~~~~~~~~~ 222 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQARE---QVE-KGYRM---SCPQKCPDD 222 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHH---HHH-cCCCC---CCCCCCCHH
Confidence 1112244677999999998889999999999999999998 999998754332222 221 11111 112345889
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+.+++.+||..+|++||++.+|.+.|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999999988764
No 265
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.7e-38 Score=299.27 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=203.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.+.| +++..+..+..+....++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRS-PYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCC-CCeeeeeEEEEECCeEEEEEE
Confidence 479999999999999999999999999999998765432 2357889999999986 455556666677789999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++.. ..+++..++.++.|++.||.|||+++++||||+|+||++ ++++.++|+|||+++........
T Consensus 80 ~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~~ 154 (274)
T cd06609 80 YCGGGSCLDLLKP--GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSK 154 (274)
T ss_pred eeCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeecccccc
Confidence 99 7899998874 378999999999999999999999999999999999999 47889999999999887644221
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||...... .....+..... .... ..
T Consensus 155 -------~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---~~~~~~~~~~~-~~~~--~~ 221 (274)
T cd06609 155 -------RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---RVLFLIPKNNP-PSLE--GN 221 (274)
T ss_pred -------cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---HHHHHhhhcCC-CCCc--cc
Confidence 22456888999999999988999999999999999999999999765432 22222222211 1111 11
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.++..+.+++.+||..+|++||+++++++ +.++.+
T Consensus 222 ~~~~~~~~~l~~~l~~~p~~Rpt~~~il~--~~~~~~ 256 (274)
T cd06609 222 KFSKPFKDFVSLCLNKDPKERPSAKELLK--HKFIKK 256 (274)
T ss_pred ccCHHHHHHHHHHhhCChhhCcCHHHHhh--ChhhcC
Confidence 26889999999999999999999999966 455543
No 266
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.3e-38 Score=299.14 Aligned_cols=261 Identities=21% Similarity=0.260 Sum_probs=200.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|++.+.||+|++|.||+|.+..+++.||||.+..... ...+.+|+++++.+.| +++..+..++......++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-GNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccC-CCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999998999999998754322 2457889999999976 66777777777888999999
Q ss_pred eccCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLLGPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||++++|.+.+..... .+++..+..++.||+.||+|||++|++||||+|+||+++ ...+.+||+|||++........
T Consensus 81 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~--~~~~~~kl~dfg~~~~~~~~~~ 158 (294)
T PLN00009 81 EYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVR 158 (294)
T ss_pred ecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE--CCCCEEEEcccccccccCCCcc
Confidence 9998899888764332 368889999999999999999999999999999999995 2456899999999976543211
Q ss_pred CCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc--------
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK-------- 232 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~-------- 232 (423)
......+++.|+|||.+.+. .++.++|||||||++|+|++|..||...................
T Consensus 159 -------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 159 -------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGV 231 (294)
T ss_pred -------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccc
Confidence 11234678899999998764 57899999999999999999999998654332211111110000
Q ss_pred -------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 233 -------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 233 -------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
...........+++.+.+++.+||+.+|++||+++++++ ..+|..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~--~~~~~~ 289 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE--HEYFKD 289 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc--CchHhH
Confidence 001111123456788999999999999999999999876 444443
No 267
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=6e-38 Score=298.20 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=199.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+|++.+.||.|++|.||+|++..+++.||||++.... ....+.+|+.+++.++| +++..+..++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~ 79 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKH-ENIVRLHDVIHTENKLMLVFEY 79 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcC-CCEeeeeeeEeeCCcEEEEEec
Confidence 5899999999999999999999999999999876543 23457789999999976 6677777777788899999999
Q ss_pred cCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 85 LGPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 85 ~~~sL~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
+.++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||++ ++++.++|+|||++........
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 80 MDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred CCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCCcc-
Confidence 9889999886543 458999999999999999999999999999999999999 4788999999999976543221
Q ss_pred CcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC-------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS------- 234 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~------- 234 (423)
......++..|++||.+.+. .++.++|||||||++|+|++|+.||.+...................
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGIS 229 (284)
T ss_pred ------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHh
Confidence 11234568899999998764 4789999999999999999999999875443222221111100000
Q ss_pred --------------CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 235 --------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 235 --------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..........+..+.++|..||+.||.+||++.+|++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011122345788999999999999999999998864
No 268
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.6e-38 Score=299.41 Aligned_cols=255 Identities=22% Similarity=0.300 Sum_probs=200.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
++|++.+.||+|+||.||+|.+..+++.||||+++... ....+.+|+++++.+.| +++..+..++...+..+++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH-ENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCC-CCeeehhheEEECCEEEEEE
Confidence 47999999999999999999999999999999876432 23568899999999986 55666666667788899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+++++.+.+......+++..++.++.||+.||.|||++|++|+||+|+||++ ++++.+||+|||++.........
T Consensus 80 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~~ 156 (288)
T cd07833 80 EYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPAS 156 (288)
T ss_pred ecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCccc
Confidence 999777777666556679999999999999999999999999999999999999 47899999999999876544321
Q ss_pred CcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh----------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK---------- 231 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~---------- 231 (423)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||.+....+...........
T Consensus 157 ------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 157 ------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcc
Confidence 11245678899999999888 7899999999999999999999999865433221111111100
Q ss_pred --------ccCC---c--hH-HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 --------KVST---P--IE-VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 --------~~~~---~--~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.... + .. .....++.++.++|.+||..+|++||++++|+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 0 01 111234888999999999999999999998864
No 269
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.3e-38 Score=295.55 Aligned_cols=247 Identities=23% Similarity=0.314 Sum_probs=195.0
Q ss_pred ceeeecCceeEEEEEEcC-CCc--eEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 13 RKIGSGSFGEIFLASHVD-TNE--IVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~-~~~--~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
+.||+|+||.||+|.+.. .++ .||||.+..... ...+.+|+.++..++|++ +..+..+... ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHEN-LIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCC-ccceeEEEcC-CeEEEEEEecC
Confidence 468999999999999865 333 599998876544 345788999999998754 5555444445 7889999999
Q ss_pred CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 ~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+.+.... ..+++..++.++.|++.||+|||++|++||||||+||+++ .++.+||+|||+++.+......
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~~~~~~~~~~-- 153 (257)
T cd05040 79 LGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDH-- 153 (257)
T ss_pred CCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEeccccccccccccccc--
Confidence 899999987644 5689999999999999999999999999999999999994 6799999999999876543221
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
+.......++..|+|||.+.+..++.++|||||||++|+|++ |..||........ ...+.......+ ....
T Consensus 154 --~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~~~~~~~~~---~~~~ 225 (257)
T cd05040 154 --YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI---LKKIDKEGERLE---RPEA 225 (257)
T ss_pred --eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHHHhcCCcCC---CCcc
Confidence 112224457788999999998899999999999999999998 9999976544332 222222111111 1234
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
.|..+.+++..||..+|++||++.+|++.|.
T Consensus 226 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 5889999999999999999999999998774
No 270
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.6e-38 Score=297.80 Aligned_cols=250 Identities=22% Similarity=0.287 Sum_probs=188.9
Q ss_pred ceeeecCceeEEEEEEc--CCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHV--DTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~--~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|.+. .++..+|+|.++..... ..+.+|+.+++.++|+ ++..+..++.+....++||||+ +
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~-~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHS-NLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCC-CEeeEEEEEcCCCCcEEEEECCCC
Confidence 46899999999999865 34567999987654322 3577899999999874 4555666666777889999999 7
Q ss_pred CCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 87 PSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 87 ~sL~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
++|.+++.... ..+++..++.++.|++.||+|||++|++||||||+||+++ ..+.+||+|||+++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~~~~~~~~~~- 155 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGLSHNKYKEDY- 155 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccccccccCcce-
Confidence 89999886432 2456778889999999999999999999999999999994 678999999999875432221
Q ss_pred CcccccCCCCcccccCccccchhcCC-------CCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-------EQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
+.......++..|+|||++.+. .++.++|||||||++|||++ |+.||.......... ..+......
T Consensus 156 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~--~~~~~~~~~ 229 (269)
T cd05087 156 ----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT--YTVREQQLK 229 (269)
T ss_pred ----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH--HHhhcccCC
Confidence 1112244678899999998643 35789999999999999996 999998654432211 122222333
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
.+.+......+..+.++|..|| .+|++||++++|+..|.
T Consensus 230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 3333333456788999999999 68999999999987763
No 271
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.7e-38 Score=299.04 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=196.9
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.|++.+.||.|+||.||+|++..+++.||||.+..... ...+..|+++++.++| +++..+..+..+....++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCC-CCCcchhhhcccCCcEEEEee
Confidence 48999999999999999999999999999998764332 2457889999999987 556666666677888999999
Q ss_pred ccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LLGPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+.++|.+++... ...+++..++.++.||+.||+|||++|++||||+|+||++ +.++.+||+|||++........
T Consensus 80 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 80 FLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred ccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCcc-
Confidence 9988898888653 3568999999999999999999999999999999999999 5788999999999876543221
Q ss_pred CcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc---------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--------- 232 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (423)
......++..|+|||.+.+.. ++.++|||||||++|+|+||+.||.+.................
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 112335688999999887654 6889999999999999999999997654322211111110000
Q ss_pred ------------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 ------------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...........+++++.++|.+||+.||++||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 001112223346788999999999999999999998864
No 272
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3e-38 Score=302.02 Aligned_cols=254 Identities=22% Similarity=0.257 Sum_probs=198.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeC--CeeEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDNVL 80 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~~l 80 (423)
++|++.+.||.|+||.||+|.+..+++.||||.++..... ..+.+|+.++..+.| +++..+..+.... ...++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h-~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH-PNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCC-CCEEEEEEEEEecCCCcEEE
Confidence 5799999999999999999999989999999987644322 235789999999986 5566665555555 88999
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||||+.++|.+++......+++..++.++.||+.||+|||++|++|+||||+|||+ +..+.++|+|||++.......
T Consensus 84 v~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 84 VMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeeccCCc
Confidence 99999889999987656679999999999999999999999999999999999999 478899999999998765432
Q ss_pred CCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC-----
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS----- 234 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~----- 234 (423)
.. .....++..|+|||.+.+.. ++.++||||||+++|+|++|..||...........+...+.....
T Consensus 161 ~~-------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (293)
T cd07843 161 KP-------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG 233 (293)
T ss_pred cc-------cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence 11 12345788999999987654 689999999999999999999999875543322222211110000
Q ss_pred --------------C---ch-HHhhcc-ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 235 --------------T---PI-EVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 235 --------------~---~~-~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. .. ..+... +++.+.++|.+||+.+|++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0 00 001111 4778999999999999999999999865
No 273
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-39 Score=315.01 Aligned_cols=256 Identities=22% Similarity=0.326 Sum_probs=209.5
Q ss_pred eEEeceeeecCceeEEEEEEcCC--C--ceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDT--N--EIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~--~--~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.++.++||.|-||.||.|.+... | --||||..+.+. ..+.|+.|+-+|+.+.|+++|..|.. + .....|||
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv-~-~e~P~Wiv 468 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGV-C-VEQPMWIV 468 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeee-e-eccceeEE
Confidence 34567899999999999998633 2 248999877654 34569999999999998554444433 3 34578999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||++ -|.|..++......++......++.||+.||.|||++++|||||..+|||++ ....|||+|||+++.+.+..
T Consensus 469 mEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs---Sp~CVKLaDFGLSR~~ed~~ 545 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS---SPQCVKLADFGLSRYLEDDA 545 (974)
T ss_pred EecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec---Ccceeeecccchhhhccccc
Confidence 9999 8999999998788899999999999999999999999999999999999995 77899999999999887765
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
... .....-...|||||.+.-..++.++|||-|||++||++. |..||++.++.+....+ +..-+.|.+
T Consensus 546 yYk------aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i----EnGeRlP~P- 614 (974)
T KOG4257|consen 546 YYK------ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI----ENGERLPCP- 614 (974)
T ss_pred hhh------ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe----cCCCCCCCC-
Confidence 422 223345678999999999999999999999999999887 99999998776543332 223333433
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCC
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGY 282 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 282 (423)
+.+|+.+..|+.+||.++|.+||++.+|...|.+++..+..
T Consensus 615 --~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qeek~ 655 (974)
T KOG4257|consen 615 --PNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEKI 655 (974)
T ss_pred --CCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhhh
Confidence 44599999999999999999999999999999999986544
No 274
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.3e-38 Score=293.13 Aligned_cols=245 Identities=22% Similarity=0.341 Sum_probs=195.8
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
++||.|+||.||+|.+.. ++.||+|+...... ...+..|+++++.+.| +++..+..++......++||||+ +++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDH-PNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 479999999999999877 89999998765443 2457889999999986 56666777777888899999999 889
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++......+++..++.++.|++.||.|||+++++||||||+|||+ +.++.++|+|||++..........
T Consensus 79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~----- 150 (251)
T cd05041 79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTV----- 150 (251)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCccee-----
Confidence 999887655678999999999999999999999999999999999999 478899999999997654221110
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
......++..|+|||.+.+..++.++|||||||++|+|++ |..||........... + ......+. ....|.+
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~---~-~~~~~~~~---~~~~~~~ 223 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER---I-ESGYRMPA---PQLCPEE 223 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH---H-hcCCCCCC---CccCCHH
Confidence 0112234567999999998889999999999999999999 8999987544322222 1 11111111 2345889
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+.+++.+||..+|.+||++++|++.|+
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 999999999999999999999998875
No 275
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.5e-38 Score=302.51 Aligned_cols=247 Identities=22% Similarity=0.304 Sum_probs=198.8
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
....+|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.++| +++..+..++...+..
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~~~~~~~~~~~~ 90 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRH-PNTIEYKGCYLREHTA 90 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCC-CCEEEEEEEEEeCCeE
Confidence 345679999999999999999999988899999998754321 2347789999999976 5666666677788889
Q ss_pred EEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 79 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
++||||+.+++.+++......+++..+..++.||+.||.|||+.||+||||+|+||++ ++++.++|+|||++.....
T Consensus 91 ~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 91 WLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSP 167 (307)
T ss_pred EEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCC
Confidence 9999999999999887666779999999999999999999999999999999999999 4788999999999875432
Q ss_pred CCCCCcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
. ....++..|+|||++. ...++.++||||||+++|||++|+.||.+...... ...+.......
T Consensus 168 ~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~---~~~~~~~~~~~ 233 (307)
T cd06607 168 A-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIAQNDSPT 233 (307)
T ss_pred C-----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH---HHHHhcCCCCC
Confidence 2 1346788999999875 34578899999999999999999999986543221 11121111111
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+.++|.+||..+|++||++.+|+.
T Consensus 234 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 234 ---LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred ---CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111234788999999999999999999999965
No 276
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.2e-38 Score=296.01 Aligned_cols=255 Identities=21% Similarity=0.275 Sum_probs=202.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|+||+||+|.+..++..+++|++.... ....+.+|+++++.+.| +++..+.......+..+++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~iv~e 79 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNH-PNVVKYYTSFVVGDELWLVMP 79 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCC-CCEEEEEEEEeeCCEEEEEEe
Confidence 47999999999999999999998889999999886543 23457899999999876 456566666677889999999
Q ss_pred cc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 84 LL-GPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
++ +++|.+++.... ..+++..+..++.|++.||.|||+.|++||||+|+||++ ++++.++|+|||++..+....
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 80 YLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred ccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhccCc
Confidence 99 889999987532 468999999999999999999999999999999999999 467899999999998776543
Q ss_pred CCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC-CchH
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS-TPIE 238 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~ 238 (423)
.... .......|+..|+|||.+... .++.++|+|||||++|+|++|+.||...... +.+.+....... .+..
T Consensus 157 ~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~ 230 (267)
T cd06610 157 DRTR---KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM---KVLMLTLQNDPPSLETG 230 (267)
T ss_pred cccc---cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh---hhHHHHhcCCCCCcCCc
Confidence 2210 112345789999999998877 6899999999999999999999999865432 222222222111 1111
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+.+++..||..||++||++++|++
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 112356789999999999999999999998865
No 277
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.5e-38 Score=301.72 Aligned_cols=259 Identities=20% Similarity=0.255 Sum_probs=196.0
Q ss_pred ceEEeceeeecCceeEEEEEEcC--CCceEEEEEecC-----CCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeC--Cee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVD--TNEIVAVKIENS-----GTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~--~~~~vaiKi~~~-----~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~ 78 (423)
+|++.+.||+|+||.||+|.+.. +++.||||++.. ......+.+|+.++..++| +++..+..++.+. ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH-ENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCC-CCccceEEEEeCCCCceE
Confidence 58999999999999999999988 889999998876 2334567889999999987 4555565555555 789
Q ss_pred EEEEeccCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEec-cCCCCeEEEeeccce
Q 014544 79 VLVLDLLGPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL-GRKANQVYIIDFGLA 153 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~-~~~~~~vkL~DFGla 153 (423)
++||||++++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++. ++..+.+||+|||++
T Consensus 80 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 80 YLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999999889988876432 25899999999999999999999999999999999999952 112789999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhh------hHHHHH
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT------KKQKYD 226 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~------~~~~~~ 226 (423)
......... ........++..|+|||.+.+. .++.++|||||||++|+|++|..||.+..... ....+.
T Consensus 160 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 160 RLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred cccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 876443221 1122345788999999988764 57899999999999999999999998644321 001111
Q ss_pred HHHhhc--------------------------cCCc---h-HHhh--ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 227 KICEKK--------------------------VSTP---I-EVLC--KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 227 ~i~~~~--------------------------~~~~---~-~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++... ...+ . .... ...+..+.+++.+||..||++||++.+++.
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111100 0000 0 0000 145678999999999999999999998864
No 278
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7e-38 Score=293.20 Aligned_cols=250 Identities=20% Similarity=0.308 Sum_probs=199.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..+|++.+.||+|+||.||+|.+.. +..+|+|++.... ....+..|+++++.+.|+ ++..+..++......+++|||
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLE-KRKVAIKTIREGAMSEEDFIEEAQVMMKLSHP-KLVQLYGVCTERSPICLVFEF 80 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeC-CCeEEEEECCCCCCCHHHHHHHHHHHHhCCCC-CeeeEEEEEccCCceEEEEEc
Confidence 3579999999999999999998854 6679999876543 345688999999999874 555666666677789999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..++.++.|++.||+|||+.|++||||||+||+++ .++.++|+|||+++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~~~~~~~~~- 156 (256)
T cd05112 81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTRFVLDDQYT- 156 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCcceeecccCccc-
Confidence 9 7899998876566789999999999999999999999999999999999994 7789999999999865432211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .....+... ..... ..
T Consensus 157 -----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~~-~~~~~---~~ 224 (256)
T cd05112 157 -----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---EVVETINAG-FRLYK---PR 224 (256)
T ss_pred -----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---HHHHHHhCC-CCCCC---CC
Confidence 1123345678999999998889999999999999999998 99999764332 222222211 11111 12
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
..+..+.+|+.+||..+|++||+++++++.|
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 3478999999999999999999999998865
No 279
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-38 Score=326.81 Aligned_cols=264 Identities=20% Similarity=0.235 Sum_probs=190.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCC-ceEEEE------------------Eec-CCCCchhHHHHHHHHHHHcCCC
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN-EIVAVK------------------IEN-SGTKHPQLLYEAKVYKILQGGS 63 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~-~~vaiK------------------i~~-~~~~~~~~~~E~~~l~~l~~~~ 63 (423)
.+.++|++++.||+|+||+||+|..+... ..+++| ... .......+.+|+.++..++| +
T Consensus 145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~H-p 223 (501)
T PHA03210 145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNH-E 223 (501)
T ss_pred hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCC-C
Confidence 34578999999999999999998765322 112222 111 11122347889999999987 5
Q ss_pred CCCeEEEeeeeCCeeEEEEeccCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc
Q 014544 64 GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYC----RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG 139 (423)
Q Consensus 64 ~i~~i~~~~~~~~~~~lv~e~~~~sL~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~ 139 (423)
++..+..++...+..|+++++++++|.+++... ........+..|+.||+.||.|||++|||||||||+|||+
T Consensus 224 nIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl--- 300 (501)
T PHA03210 224 NILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL--- 300 (501)
T ss_pred CcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---
Confidence 566677777788889999999998988877532 1224567788999999999999999999999999999999
Q ss_pred CCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh
Q 014544 140 RKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 219 (423)
Q Consensus 140 ~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ 219 (423)
+.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||+||||++|..++......
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 47889999999999876543221 112467999999999999999999999999999999999987654322211
Q ss_pred hhHHHHHHHHhh------ccCC-------------------chHH--hhccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 220 TKKQKYDKICEK------KVST-------------------PIEV--LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 220 ~~~~~~~~i~~~------~~~~-------------------~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
.....+.++... .+.. .... ....++..+.++|.+||..||.+||++.+++.
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~- 453 (501)
T PHA03210 375 KPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA- 453 (501)
T ss_pred CHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh-
Confidence 111222221110 0000 0001 11235678889999999999999999999966
Q ss_pred HHHHHHh
Q 014544 273 FHDLFSR 279 (423)
Q Consensus 273 L~~~~~~ 279 (423)
+.+|..
T Consensus 454 -hp~f~~ 459 (501)
T PHA03210 454 -LPLFSA 459 (501)
T ss_pred -Chhhhc
Confidence 455543
No 280
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.8e-38 Score=296.78 Aligned_cols=249 Identities=18% Similarity=0.244 Sum_probs=187.3
Q ss_pred ceeeecCceeEEEEEEcC--CCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVD--TNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~--~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|.... ....+++|.+..... ...+.+|+.+++.+.| +++..+...+......++||||+ +
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h-~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNH-PNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCC-CCcceEEEEECCCCceEEEEEeCCC
Confidence 468999999999997543 345688897654332 2346789999998876 55666666666778899999999 7
Q ss_pred CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 87 PSLEDLFVYCRR----KFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 87 ~sL~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||++.........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccchhe
Confidence 899999875432 24678889999999999999999999999999999999 47889999999998654322110
Q ss_pred CcccccCCCCcccccCccccchhcC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLG-------IEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||......... ...+......
T Consensus 157 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~--~~~~~~~~~~ 229 (269)
T cd05042 157 -----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVL--KQVVREQDIK 229 (269)
T ss_pred -----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHH--HHHhhccCcc
Confidence 01123345778999998753 356889999999999999999 88999865433211 1112233333
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.+.+.....++..+.+++..|| .||++||++++|.+.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 230 LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 3334445567899999999999 5999999999998876
No 281
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=300.99 Aligned_cols=287 Identities=43% Similarity=0.682 Sum_probs=237.5
Q ss_pred ccC-ceEEeceeeecCceeEEEEEEcCCC-ceEEEEEecCCCCc--hhHHHHHHHHHHHc---CCCCCCeEEEee-eeCC
Q 014544 5 IGV-KYKLGRKIGSGSFGEIFLASHVDTN-EIVAVKIENSGTKH--PQLLYEAKVYKILQ---GGSGIPNIKWYG-VDGE 76 (423)
Q Consensus 5 i~~-~y~i~~~Lg~G~fg~Vy~a~~~~~~-~~vaiKi~~~~~~~--~~~~~E~~~l~~l~---~~~~i~~i~~~~-~~~~ 76 (423)
... +|++.+.||+|+||.||+|.+..++ ..+|+|+....... ..+..|..++..+. +..+++.+...+ ....
T Consensus 15 ~~~~~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~ 94 (322)
T KOG1164|consen 15 KVNTRYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED 94 (322)
T ss_pred ccccceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc
Confidence 344 8999999999999999999987764 67999987764332 26899999999998 456899999999 5788
Q ss_pred eeEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC--CCCeEEEeeccce
Q 014544 77 DNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR--KANQVYIIDFGLA 153 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~--~~~~vkL~DFGla 153 (423)
..||||+++|.+|.++..... +.++..+++.|+.|++.+|++||+.|++||||||+|++++... ....++|.|||+|
T Consensus 95 ~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 95 FNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 899999999999999987555 7899999999999999999999999999999999999997543 1267999999999
Q ss_pred e--eccCCCCCCcccccC-CCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 154 K--KYRDPTTNRHIPYRE-NKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 154 ~--~~~~~~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
+ .+.........+.+. ...+.||.+|++++++.+.+.+++.|+||+++++.+|+.|.+||.+.........+.....
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 9 433332221233334 3467799999999999999999999999999999999999999988766555555544444
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceecc
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILK 294 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~~ 294 (423)
...... .+...|.++.+++..+-..+..++|++..+...|.+.+...+...+.+|||+...
T Consensus 255 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~~~ 315 (322)
T KOG1164|consen 255 KLLTDR---FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEVKL 315 (322)
T ss_pred hhcccc---ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccccc
Confidence 333322 3344578999999999999999999999999999999999999999999998654
No 282
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=7.1e-39 Score=300.81 Aligned_cols=240 Identities=18% Similarity=0.243 Sum_probs=184.6
Q ss_pred ceeeecCceeEEEEEEcCCCc-------eEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 13 RKIGSGSFGEIFLASHVDTNE-------IVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~-------~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+.||.|+||.||+|.+...+. .|++|+...... .+.+..|+.+++.+.| +++..+..++......++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h-~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSH-KHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCC-CChhheeeEEEeCCCcEEEEe
Confidence 469999999999999865443 388887654332 2457788889888876 556666666677788999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC-----CCeEEEeeccceeecc
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-----ANQVYIIDFGLAKKYR 157 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~-----~~~vkL~DFGla~~~~ 157 (423)
|+ +++|.+++......+++..++.++.||+.||+|||++||+||||||+|||++.++. ...++|+|||++....
T Consensus 80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 99 78999988765567899999999999999999999999999999999999962211 1247999999986543
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhC-CCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRG-SLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.. ....++..|+|||.+.+. .++.++|||||||++|+|++| ..||......... .+.......
T Consensus 160 ~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~----~~~~~~~~~ 224 (258)
T cd05078 160 PK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL----QFYEDRHQL 224 (258)
T ss_pred Cc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH----HHHHccccC
Confidence 21 234678899999999874 579999999999999999998 4666554332211 122222222
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
+ ...+.++.++|.+||+.+|++||++++|++.|
T Consensus 225 ~-----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 225 P-----APKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred C-----CCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 2 22357899999999999999999999998865
No 283
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.8e-38 Score=298.93 Aligned_cols=240 Identities=25% Similarity=0.338 Sum_probs=183.8
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
.||+|+||.||+|.+..+++.||||++..... .....+|..++..+. +++++..+..+....+..++||||+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999999999999999998764321 122345554444443 3455666666666778899999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++........
T Consensus 81 ~~~L~~~i~~-~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~~---- 152 (279)
T cd05633 81 GGDLHYHLSQ-HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKP---- 152 (279)
T ss_pred CCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccCc----
Confidence 7889887764 4569999999999999999999999999999999999999 5788999999999876543221
Q ss_pred cccCCCCcccccCccccchhc-CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 166 PYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
....|+..|+|||.+. +..++.++|||||||++|+|++|..||.......... .... ....+ ..+...+
T Consensus 153 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~~---~~~~~-~~~~~~~ 222 (279)
T cd05633 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRM---TLTVN-VELPDSF 222 (279)
T ss_pred -----cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHHH---hhcCC-cCCcccc
Confidence 1346899999999987 4568999999999999999999999997644322221 1111 11111 1123456
Q ss_pred hHHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
+.++.++|.+||..||++|| +++++++
T Consensus 223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 88999999999999999999 4776644
No 284
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=7.6e-38 Score=294.64 Aligned_cols=252 Identities=19% Similarity=0.281 Sum_probs=197.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--------chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--------HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
+|++.+.||.|+||+||+|.. .+++.+|||.+..... ...+.+|+.+++.++| +++..+..++.+....+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKH-VNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCC-CCEeeEeeEeecCCeEE
Confidence 588999999999999999986 4688899998764331 1347789999999986 55666766677778999
Q ss_pred EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 80 LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
++|||+ +++|.+++.. ...+++..+..++.|++.||+|||+.||+|+||+|+||++ ++.+.++|+|||++.....
T Consensus 79 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 79 IFMEFVPGGSISSILNR-FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EEEecCCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhh
Confidence 999999 8899998865 3568999999999999999999999999999999999999 5788999999999876532
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
...... .........|+..|+|||.+.+..++.++|||||||++|+|++|..||........ ...+... ....+
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~~~~~~~--~~~~~ 228 (265)
T cd06631 155 VGLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA---MFYIGAH--RGLMP 228 (265)
T ss_pred cccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH---HHHhhhc--cCCCC
Confidence 211100 00112245689999999999998899999999999999999999999986543221 1111111 11112
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++.++.++|.+||..+|++||++.+++.
T Consensus 229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 233556889999999999999999999998864
No 285
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=7.5e-38 Score=301.14 Aligned_cols=259 Identities=24% Similarity=0.287 Sum_probs=194.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeee-------C
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVD-------G 75 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~-------~ 75 (423)
++|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+++++.+.|++.++.+..+... .
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 579999999999999999999999999999998754322 22356899999999876555444433221 2
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...++||||++++|.+++......+++.+++.++.||+.||+|||++|++|+||||+||++ +..+.+||+|||++..
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~ 168 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGLARA 168 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEECcCCCccc
Confidence 3469999999999999887655579999999999999999999999999999999999999 4788999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc-
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV- 233 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~- 233 (423)
+........ .......++..|+|||.+.+.. ++.++||||||+++|+|++|..||.+.........+..+.....
T Consensus 169 ~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (310)
T cd07865 169 FSLSKNSKP---NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP 245 (310)
T ss_pred ccCCcccCC---CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 654332110 0112346788999999987654 78899999999999999999999987554333232222221100
Q ss_pred ---------------CCch-------HHh-hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 ---------------STPI-------EVL-CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 ---------------~~~~-------~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+. ..+ ....+..+.++|.+||..||++||+++++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000 000 0012456789999999999999999998864
No 286
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.9e-38 Score=297.58 Aligned_cols=240 Identities=15% Similarity=0.184 Sum_probs=182.7
Q ss_pred ceeeecCceeEEEEEEcCC------------CceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 13 RKIGSGSFGEIFLASHVDT------------NEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~------------~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+.||+|+||.||+|+.... ...|++|++..... ...+..|+.++..+.| +++..+..++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~h-p~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSH-KHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCC-CCEeeEEEEEecCCCC
Confidence 4689999999999985421 23588998765432 2346778888888876 5676777777777888
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC----CCCeEEEeeccce
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR----KANQVYIIDFGLA 153 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~----~~~~vkL~DFGla 153 (423)
+++|||+ +++|..++......+++..++.++.||+.||+|||++||+||||||+|||++... ....++|+|||++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999 6777777765556799999999999999999999999999999999999995211 1123899999998
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhc-CCCCCCcchHHHHHHHHHHHH-hCCCCCCCchhhhhHHHHHHHHhh
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-GIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~s~~sDVwSlGvil~ell-tG~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......... .....
T Consensus 160 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~----~~~~~ 224 (262)
T cd05077 160 ITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE----RFYEG 224 (262)
T ss_pred ccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH----HHHhc
Confidence 654321 1346788999999887 466899999999999999998 589998764332211 11121
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.... ....+.++.+||.+||+.||.+||++.+|++.|
T Consensus 225 ~~~~-----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QCML-----VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred CccC-----CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111 122357899999999999999999999998765
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=6.6e-38 Score=292.99 Aligned_cols=248 Identities=25% Similarity=0.387 Sum_probs=199.3
Q ss_pred eEEeceeeecCceeEEEEEEcCCC----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTN----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~----~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+++.+.||.|+||.||+|.+...+ ..||+|++..... ...+..|+.++..+.| +++..+..++.+....+++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~i 79 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDH-PNIVKLLGVCTEEEPLMIV 79 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCC-CchheEEEEEcCCCeeEEE
Confidence 467899999999999999998766 8899999876553 4468889999999954 6677776667777889999
Q ss_pred Eecc-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~-l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
||++ +++|.+++...... +++..+..++.||+.||+|||+.|++|+||||+||++ +.++.++|+|||++......
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceecccc
Confidence 9999 88999998764444 9999999999999999999999999999999999999 47789999999999876554
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.... .....++..|+|||.+.+..++.++|||||||++|+|++ |..||...... ..+..+..... .+
T Consensus 157 ~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~~~~~~-~~-- 224 (258)
T smart00219 157 DYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEYLKKGYR-LP-- 224 (258)
T ss_pred cccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhcCCC-CC--
Confidence 2211 112236789999999988889999999999999999998 88999764433 22222222221 11
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.....|.++.+++.+||..+|++||++.++++.|
T Consensus 225 -~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 -KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1133588999999999999999999999998753
No 288
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=9.6e-39 Score=300.43 Aligned_cols=248 Identities=21% Similarity=0.327 Sum_probs=200.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|+||.||+|.+..+++.||+|.+..... ...+.+|+++++.+.| +++..+..++......++++|
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNS-PYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCC-CchhhhheeeecCCEEEEEEE
Confidence 468899999999999999999999999999998765532 3457889999999985 556666666667789999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++......+++..+..++.|++.||.|||+ .|++|+||||+||+++ ..+.++|+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred ecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeecccchhhHHHHh
Confidence 99 589999988655789999999999999999999999 9999999999999994 688999999999876543221
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchh--hhhHHHHHHHHhhccCCchHH
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA--ATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~~~~~ 239 (423)
....++..|+|||.+.+..++.++|||||||++|+|++|..||..... .........+..... ..
T Consensus 157 ---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~ 223 (265)
T cd06605 157 ---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP----PR 223 (265)
T ss_pred ---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC----CC
Confidence 125688899999999998999999999999999999999999976421 111122222222211 11
Q ss_pred hhcc-ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~-~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+... ++.++.++|.+||..+|++||++.+|+.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 1111 5889999999999999999999999865
No 289
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.3e-38 Score=297.95 Aligned_cols=253 Identities=19% Similarity=0.306 Sum_probs=201.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcC-----CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVD-----TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~-----~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
..+|++.+.||.|+||.||+|+.+. ..+.|++|........ ..+.+|+++++.+.| +++..+..++.+...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~ 82 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSH-KNVVRLLGLCREAEP 82 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCC-cceeeeEEEECCCCc
Confidence 3689999999999999999999764 3467999987654433 458899999999976 556667777777788
Q ss_pred eEEEEecc-CCCHHHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEe
Q 014544 78 NVLVLDLL-GPSLEDLFVYCR--------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~--------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
.++||||+ +++|.+++.... ..+++..++.++.||+.||+|||+.||+||||||+|||++ ..+.++|+
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEEc
Confidence 99999999 789999987533 1589999999999999999999999999999999999994 78899999
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 227 (423)
|||++........ .......++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ..+..
T Consensus 160 ~~~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~~ 230 (275)
T cd05046 160 LLSLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLNR 230 (275)
T ss_pred ccccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHHH
Confidence 9999875432211 11224456788999999998889999999999999999998 88999764432 22333
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+.......+. ...+|..+.+++.+||..+|++||++.+++..|.
T Consensus 231 ~~~~~~~~~~---~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 231 LQAGKLELPV---PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHcCCcCCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 3222222221 1345889999999999999999999999988764
No 290
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=293.80 Aligned_cols=255 Identities=19% Similarity=0.212 Sum_probs=212.0
Q ss_pred ccCceEEe-ceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeee----eCCeeE
Q 014544 5 IGVKYKLG-RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGV----DGEDNV 79 (423)
Q Consensus 5 i~~~y~i~-~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~----~~~~~~ 79 (423)
+-.+|.+. ++||-|-.|.|-.+.++.+++.+|+|++... +...+|+++.-....|++|+.|...+. ......
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL 135 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS---PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL 135 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC---HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence 34567766 5789999999999999999999999988643 456789998888888888887754433 345678
Q ss_pred EEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 80 LVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
+|||++ ||.|...+...+ ..|++.++..|+.||..|+.|||+.+|.||||||+|+|++....+..+||+|||+|+...
T Consensus 136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~ 215 (400)
T KOG0604|consen 136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ 215 (400)
T ss_pred eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence 999999 999999998654 359999999999999999999999999999999999999877778899999999998765
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhh-hHHHHHHHHhhccCCc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT-KKQKYDKICEKKVSTP 236 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~i~~~~~~~~ 236 (423)
.... -.+.+-|+.|.|||++....|+...|+||+||++|.|++|-+||....... ....-.+|..+.+.+|
T Consensus 216 ~~~~--------L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP 287 (400)
T KOG0604|consen 216 EPGD--------LMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP 287 (400)
T ss_pred CCcc--------ccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence 4332 225678999999999999999999999999999999999999997654322 1233345667777777
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++ +..+++..+++|+.+|..+|.+|.+++++..
T Consensus 288 ~pE-Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 288 EPE-WSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred Chh-HhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 554 4677899999999999999999999988865
No 291
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.8e-38 Score=298.28 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=203.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
...|+..+.||.|+||.||+|.+..++..||||++..... ...+.+|+.+++.+.| ++++.+..++.+....++||
T Consensus 3 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 3 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCC-CCEeeEEEEEEECCEEEEEE
Confidence 3568899999999999999999998899999998765432 3357789999999876 56667777777888999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+++. ...+++..+..++.|++.||+|||+.+++|+||+|+||+++ .++.++|+|||++........
T Consensus 82 e~~~~~~L~~~i~--~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 82 EYLGGGSALDLLR--AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred ecCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccceeccCCcc
Confidence 999 889998876 35689999999999999999999999999999999999994 778999999999977643321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
......++..|+|||.+.+..++.++|||||||++|||++|..||.......... .+.. ... +...
T Consensus 157 -------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~---~~~~-~~~---~~~~ 222 (277)
T cd06640 157 -------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF---LIPK-NNP---PTLT 222 (277)
T ss_pred -------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh---hhhc-CCC---CCCc
Confidence 1123467889999999998889999999999999999999999998754332111 1111 111 1122
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
..+|..+.+++.+||..+|++||++++++. ..++...+
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~--~~~~~~~~ 260 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLK--HKFIVKNA 260 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHh--ChHhhhcc
Confidence 345788999999999999999999999966 34444433
No 292
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.4e-38 Score=294.58 Aligned_cols=246 Identities=21% Similarity=0.230 Sum_probs=201.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||++++..+++.||+|.+.... ....+.+|+.+++.++| +++..+..+....+..++|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH-PNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCC-CCeeeeEeeecCCCeEEEEEe
Confidence 6999999999999999999999999999999876432 23468889999999987 556667777778889999999
Q ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+.+.... ..+++..++.++.|++.||.|||++|++|+||+|+|||+ +.++.++|+|||++........
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcchh
Confidence 99 889999887533 358999999999999999999999999999999999999 4778999999999987644321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. .....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+..+....... ..
T Consensus 157 ~-------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~----~~ 222 (256)
T cd08218 157 L-------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK---NLVLKIIRGSYPP----VS 222 (256)
T ss_pred h-------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH---HHHHHHhcCCCCC----Cc
Confidence 1 12346788999999999988999999999999999999999999754332 3333333322211 12
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++.++.++|.+||+.+|++||++.+|++
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 355889999999999999999999999876
No 293
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.8e-37 Score=295.02 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=196.2
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCe-----
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQ--GGSGIPNIKWYGVDGED----- 77 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~----- 77 (423)
|++.+.||+|+||.||+|++..+++.||||++...... ..+.+|+.+++.+. .++++..+..++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 78999999999999999999888999999988643322 24667888888875 24666666666665555
Q ss_pred eEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++||++.++|.+++.... ..+++..++.++.|++.||.|||+.+++|+||+|+||++ +.++.++|+|||++..+
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLARIY 157 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcceec
Confidence 89999999889999887543 358999999999999999999999999999999999999 46799999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh------
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE------ 230 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~------ 230 (423)
...... ....++..|+|||.+.+..++.++|||||||++|+|++|..||.+....+....+.....
T Consensus 158 ~~~~~~--------~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 158 SFEMAL--------TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEE 229 (287)
T ss_pred cCCccc--------ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHh
Confidence 443221 133578899999999998999999999999999999999999987554322222211100
Q ss_pred -------------hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 -------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 -------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+.......+++.+.++|.+||+.||++||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00011112222345678899999999999999999998864
No 294
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.9e-38 Score=295.12 Aligned_cols=236 Identities=18% Similarity=0.256 Sum_probs=185.3
Q ss_pred ceeeecCceeEEEEEEcCCC----------ceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 13 RKIGSGSFGEIFLASHVDTN----------EIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~----------~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+.||+|+||.||+|.+..++ ..|++|+...... ...+.+|+.+++.+.| +++..+..++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH-KHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCC-cchhheeeEEec-CCcEEE
Confidence 47899999999999998766 3588887665443 5668899999999986 455555544444 678999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC-------eEEEeeccce
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN-------QVYIIDFGLA 153 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~-------~vkL~DFGla 153 (423)
|||+ +++|.+++......+++..++.++.||+.||.|||++||+||||||+|||++ ..+ .+||+|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~---~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVA---RYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEe---cCccccCCceeEEeCCCCcc
Confidence 9999 8899998876555799999999999999999999999999999999999995 333 7999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCC--CCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHh
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
...... ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...........+ .
T Consensus 156 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~----~ 220 (259)
T cd05037 156 ITVLSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY----Q 220 (259)
T ss_pred cccccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH----h
Confidence 765431 133567789999999877 78999999999999999999 68888765432222211 1
Q ss_pred hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 231 KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 231 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.....+.. ....+.++|.+||..+|++||++.+|++.|
T Consensus 221 ~~~~~~~~-----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 DQHRLPMP-----DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred cCCCCCCC-----CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111111 136899999999999999999999998865
No 295
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.9e-38 Score=306.20 Aligned_cols=259 Identities=20% Similarity=0.225 Sum_probs=195.9
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeee--------
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVD-------- 74 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~-------- 74 (423)
++++|++.+.||.|+||.||+|.+..+++.||+|.+.... ....+.+|+++++.++|++.+..+..+...
T Consensus 3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence 4689999999999999999999999999999999875543 234578899999999875544433332221
Q ss_pred -----CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEee
Q 014544 75 -----GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 75 -----~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
....++||||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++ ..++.++|+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~kl~d 158 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLE--QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVLKIGD 158 (342)
T ss_pred ccccccceEEEEeecccccHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceEEECC
Confidence 23578999999888888775 35699999999999999999999999999999999999995 3456899999
Q ss_pred ccceeeccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH
Q 014544 150 FGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i 228 (423)
||+++.......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.............
T Consensus 159 fg~~~~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 159 FGLARIVDPHYSHKG----YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred cccceecCCcccccc----ccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 999986543221110 1123357889999998764 55889999999999999999999999765433221111100
Q ss_pred -------------------H---hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 229 -------------------C---EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 229 -------------------~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. ......+.......++.++.+||.+||..||.+||++++|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 0 011112222333456789999999999999999999999865
No 296
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-39 Score=319.03 Aligned_cols=243 Identities=22% Similarity=0.285 Sum_probs=198.8
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHH
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLE 90 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~--~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~ 90 (423)
.||+|.||+||-|++..+...+|||-+... ...+-+..|+.+.+.|+|.+++..+.. ...+..+-|.||-. ||+|.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-VSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-cCCCCeEEEEeecCCCCcHH
Confidence 589999999999999999999999965433 233458899999999998655444444 44556778999998 99999
Q ss_pred HHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 91 DLFVYCRRKF--SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 91 ~~l~~~~~~l--~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
+++...-+++ .+.++-.+..||++||.|||.+.|||||||-+|+|++ .-.|.+||+|||.++.+..-..
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTsKRLAginP------- 731 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTSKRLAGINP------- 731 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccchhhccCCc-------
Confidence 9998766677 8899999999999999999999999999999999996 4578999999999998765432
Q ss_pred CCCCcccccCccccchhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 169 ENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
...++.||..|||||++..++ |+.++|||||||++.||.||++||..+... ...+.++...+..+|++. .++.
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp--qAAMFkVGmyKvHP~iPe---elsa 806 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP--QAAMFKVGMYKVHPPIPE---ELSA 806 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh--hHhhhhhcceecCCCCcH---HHHH
Confidence 235789999999999998654 899999999999999999999999875433 223334434444444443 3488
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+.+.||.+|+..+|.+||++.+|+.
T Consensus 807 eak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 807 EAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHcCCCcccCccHHHhcc
Confidence 9999999999999999999998854
No 297
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.5e-38 Score=306.24 Aligned_cols=265 Identities=20% Similarity=0.286 Sum_probs=202.7
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEee----eeCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYG----VDGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~----~~~~ 76 (423)
++++|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+.| ++++.+..++ ....
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~~ 81 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKH-DNIIAIRDILRPPGADFK 81 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCC-CCccCHHHhccccCCCCc
Confidence 4689999999999999999999999999999999876532 23457789999999986 4455443322 2345
Q ss_pred eeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 77 DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
..++||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++...
T Consensus 82 ~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 82 DVYVVMDLMESDLHHIIHS-DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGL 157 (334)
T ss_pred eEEEEEehhhhhHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceee
Confidence 6899999998888888764 4569999999999999999999999999999999999999 47899999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH-------
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI------- 228 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i------- 228 (423)
........ .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+...
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 158 SSSPTEHK---YFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred cccCcCCC---cccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 44322110 11124578899999999876 45889999999999999999999999765432211111110
Q ss_pred ----------------HhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 229 ----------------CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 229 ----------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.......+...+....+.++.++|.+||+.+|++||++++++. ..++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~--~~~~~~ 299 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ--HPFLAQ 299 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh--Chhhhh
Confidence 1111122223344567899999999999999999999998866 455543
No 298
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=6.6e-38 Score=296.98 Aligned_cols=252 Identities=20% Similarity=0.308 Sum_probs=199.7
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+. .++++..+..++......+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 5889999999999999999999999999999876532 2345788999999997 2455666666667788899999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+++.. ..+++..++.++.|++.||.|||+.||+|+||+|+||+++ ..+.++|+|||++........
T Consensus 82 e~~~~~~L~~~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKA--GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCceeecCCCcc
Confidence 999 8899888753 4789999999999999999999999999999999999994 688999999999987654432
Q ss_pred CCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. .....|+..|+|||.+.+ ..++.++|||||||++|+|++|..||.+..... ....+.. . .+....
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~---~~~~~~~-~--~~~~~~ 223 (277)
T cd06917 157 K-------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR---AMMLIPK-S--KPPRLE 223 (277)
T ss_pred c-------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh---hhhcccc-C--CCCCCC
Confidence 1 124468899999999875 447899999999999999999999998653321 1111111 1 111111
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
...++.++.+++..||..||++||++.+++. ..++.+
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~--~~~~~~ 260 (277)
T cd06917 224 DNGYSKLLREFVAACLDEEPKERLSAEELLK--SKWIKA 260 (277)
T ss_pred cccCCHHHHHHHHHHcCCCcccCcCHHHHhh--ChHhhc
Confidence 1236889999999999999999999999976 455543
No 299
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=8.5e-38 Score=294.73 Aligned_cols=249 Identities=24% Similarity=0.336 Sum_probs=192.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCCCCeEEEeeee--CCe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSGIPNIKWYGVD--GED 77 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~~ 77 (423)
..|++.+.||+|+||.||+|.+..++..|++|.+..... ...+.+|+.+++.++|++ +..+..+... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~-i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHER-IVQYYGCLRDRAEKT 80 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCC-eeeEEEEEEcCCCCE
Confidence 479999999999999999999999999999998754321 124778999999998644 4444444332 456
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++|||+ +++|.+++.. ...+++..++.++.||+.||+|||+.+|+||||||+||++ +.++.++|+|||+++..
T Consensus 81 ~~l~~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKA-YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEEeCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccc
Confidence 78999999 7899988865 3468999999999999999999999999999999999999 47889999999999765
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... +.+.........
T Consensus 157 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~---~~~~~~~~~~~~-- 227 (266)
T cd06651 157 QTICMSG----TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM---AAIFKIATQPTN-- 227 (266)
T ss_pred ccccccC----CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH---HHHHHHhcCCCC--
Confidence 4321110 0112346889999999999988999999999999999999999999865332 222222111111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+...+++.+.+++ .||..+|++||++++|++
T Consensus 228 -~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 -PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 112234477889998 688899999999999865
No 300
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=292.15 Aligned_cols=262 Identities=23% Similarity=0.298 Sum_probs=217.5
Q ss_pred ceEEe-ceeeecCceeEEEEEEcCCCceEEEEEecCCCCc--hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 8 KYKLG-RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH--PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 8 ~y~i~-~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~--~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
-|++. +.||+|+|+.|--+....++..||||++.+...+ .++.+|++++...++|.+|..+..++.+...+|||||-
T Consensus 78 ~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 78 MYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 34444 6789999999999999999999999998877544 45899999999999999999998899999999999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ ||+|...+.+ ++.|++.++..+..+|+.||.|||.+||.||||||+|||....+.-.-||||||.++.-........
T Consensus 158 m~GGplLshI~~-~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 158 MRGGPLLSHIQK-RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred ccCchHHHHHHH-hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 9 9999998876 5679999999999999999999999999999999999999755555679999999876543322222
Q ss_pred cccccCCCCcccccCccccchhc---CC--CCCCcchHHHHHHHHHHHHhCCCCCCCchhh------------hhHHHHH
Q 014544 164 HIPYRENKNLTGTARYASCNTHL---GI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAA------------TKKQKYD 226 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~---~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~------------~~~~~~~ 226 (423)
......-.+.+|+..|||||+.. +. .|+.+.|+||||+|||.|+.|.+||.+.-.. -....+.
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFE 316 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHH
Confidence 11111233678999999999864 32 3899999999999999999999999874321 2456677
Q ss_pred HHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 227 KICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 227 ~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.|.++++.+|... +..++.+.++++..+|..++.+|.++.+++.
T Consensus 317 sIQEGkYeFPdkd-WahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 317 SIQEGKYEFPDKD-WAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHhccCCcCChhh-hHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 8888899888554 5678999999999999999999998887755
No 301
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.7e-37 Score=291.42 Aligned_cols=249 Identities=26% Similarity=0.362 Sum_probs=205.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
++|++.+.||.|++|.||+|.+..+++.|+||++..... ...+..|+..+..++| +++..+..+.......+++||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCES-PYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCC-CCeeeEEEEEccCCeEEEEEE
Confidence 468999999999999999999999999999998876543 4568899999999985 566667767777789999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++... ..+++..++.++.||+.||.|||+ +|++||||+|+||++ +.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 80 YMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred ecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCCC
Confidence 99 69999998753 679999999999999999999999 999999999999999 4788999999999987654332
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. .....++..|+|||.+.+..++.++||||||+++|+|++|..||.........+....+..... ....
T Consensus 156 ~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 224 (264)
T cd06623 156 Q-------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP----PSLP 224 (264)
T ss_pred c-------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC----CCCC
Confidence 1 1234678999999999998899999999999999999999999987542222333333332221 1122
Q ss_pred cc-ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~-~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.. ++..+.++|..||..+|++||++.+|++
T Consensus 225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 33 6889999999999999999999999977
No 302
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=7.3e-38 Score=305.78 Aligned_cols=255 Identities=21% Similarity=0.245 Sum_probs=196.7
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeC-----
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDG----- 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~----- 75 (423)
+.++|.+.+.||+|+||.||+|++..+++.||||.+... .....+.+|+.+++.++|.+ +..+..+....
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-i~~~~~~~~~~~~~~~ 81 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHEN-VIAIKDIMPPPHREAF 81 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCC-ccchHHheeccccccc
Confidence 568999999999999999999999999999999987542 12335678999999998754 44443332221
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...+++|||++++|.+++.. ...+++..+..++.||+.||.|||+++++||||||+|||+ +.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 82 NDVYIVYELMDTDLHQIIRS-SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLART 157 (337)
T ss_pred CcEEEEEeCCCCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCccccc
Confidence 35799999999999888764 4579999999999999999999999999999999999999 4778999999999986
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh---
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK--- 231 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 231 (423)
...... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+..............
T Consensus 158 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 158 TSEKGD-------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred cCCCcc-------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 643321 1124467889999999875 45889999999999999999999999764332211111111100
Q ss_pred --------------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 --------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 --------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+.......+++++.++|.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~ 290 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALA 290 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHc
Confidence 0111122233467889999999999999999999999876
No 303
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.9e-38 Score=303.70 Aligned_cols=247 Identities=19% Similarity=0.305 Sum_probs=194.9
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..|.....||+|+||.||++.+..++..||||.+.... ....+.+|+.+++.++| +++..+..++...+..++||||
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h-~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHH-ENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCC-CcHHHHHHheecCCeEEEEEeC
Confidence 44566788999999999999998889999999875433 23457889999999876 4555555555677889999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||++ +.++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~~~~-- 173 (292)
T cd06658 101 LEGGALTDIVT--HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSKEVP-- 173 (292)
T ss_pred CCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhcccccc--
Confidence 9 778888765 3468999999999999999999999999999999999999 4778999999999876543221
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||........ +..+.. ...... .....
T Consensus 174 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~~~~-~~~~~~-~~~~~ 243 (292)
T cd06658 174 -----KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA---MRRIRD-NLPPRV-KDSHK 243 (292)
T ss_pred -----cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHh-cCCCcc-ccccc
Confidence 11245688999999999988899999999999999999999999986543322 222211 111111 11124
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+..+.+++..||..+|.+||+++++++
T Consensus 244 ~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 244 VSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 5788999999999999999999999876
No 304
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=9.4e-38 Score=292.89 Aligned_cols=246 Identities=24% Similarity=0.308 Sum_probs=197.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEee--eeCCeeEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYG--VDGEDNVLV 81 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~--~~~~~~~lv 81 (423)
+|++.+.||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.+.|++ +..+..+. ......+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~-i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPN-IVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCc-cceeeeeeecCCCCEEEEE
Confidence 58999999999999999999999999999998764332 234778999999998754 44443333 244567999
Q ss_pred Eecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH-----hCCccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 82 LDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVH-----SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH-----s~giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
|||+ +++|.+++... ...+++..++.++.||+.||.||| +.+++|+||||+||+++ .++.+||+|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEecccc
Confidence 9999 88999998754 456899999999999999999999 89999999999999994 789999999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+......... .....++..|+|||.+.+..++.++||||||+++|+|++|..||...... .....+....
T Consensus 157 ~~~~~~~~~~-------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~ 226 (265)
T cd08217 157 AKILGHDSSF-------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIKEGK 226 (265)
T ss_pred cccccCCccc-------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHhcCC
Confidence 9876543321 12446899999999999988999999999999999999999999875422 2222222222
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. ......++..+.+++.+||..+|++||++++|++
T Consensus 227 ~----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 227 F----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred C----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 1 1223456889999999999999999999999875
No 305
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.2e-37 Score=291.66 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=192.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-------chhHHHHHHHHHHHcCCCCCCeEEEeeee--CCe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-------HPQLLYEAKVYKILQGGSGIPNIKWYGVD--GED 77 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~~ 77 (423)
.+|++.+.||+|+||.||+|.+..+++.||||.+..... ...+.+|+.+++.+.|+ ++..+..+..+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHE-RIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCC-CeeeEEeEeccCCCce
Confidence 579999999999999999999999999999998753221 12467899999999764 45555444433 346
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++|||+ +++|.+++.. ...+++..++.++.|++.||+|||++||+|+||||+|||+ +.++.++|+|||+++..
T Consensus 81 ~~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKS-YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEEecCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCcccccc
Confidence 78999999 7899998865 3568999999999999999999999999999999999999 47889999999999865
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+..+......
T Consensus 157 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~-- 227 (265)
T cd06652 157 QTICLSG----TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM---AAIFKIATQPTN-- 227 (265)
T ss_pred ccccccc----cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH---HHHHHHhcCCCC--
Confidence 4321110 1122456889999999999888999999999999999999999999865332 222222211111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......++..+.++|.+||. +|.+||++++|++
T Consensus 228 -~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 -PVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred -CCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 11223346789999999994 9999999998865
No 306
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.7e-37 Score=300.63 Aligned_cols=248 Identities=23% Similarity=0.310 Sum_probs=199.1
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
....|+..+.||+|+||.||+|++..++..||+|++..... ...+..|+++++.++| +++..+..++......+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKH-PNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCC-CCEEEEEEEEeeCCeEE
Confidence 34568899999999999999999998999999998764321 2357789999999976 55666666677788899
Q ss_pred EEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 80 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 80 lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+||||+.++|.+++......+++..+..++.||+.||.|||++||+||||+|+||++ +.++.++|+|||++......
T Consensus 102 lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 102 LVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA 178 (317)
T ss_pred EEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc
Confidence 999999889998887666779999999999999999999999999999999999999 47889999999998654321
Q ss_pred CCCCcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....++..|+|||.+. +..++.++|||||||++|+|++|..||...... ..+..+........
T Consensus 179 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~~~~~~~~~~~ 244 (317)
T cd06635 179 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHIAQNESPTL 244 (317)
T ss_pred -----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHHhccCCCC
Confidence 2346888999999974 445889999999999999999999999765332 22222222221111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
....++..+.+++.+||+.+|.+||++.+|++..
T Consensus 245 ---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 245 ---QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ---CCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 1123578899999999999999999999997743
No 307
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.1e-37 Score=291.63 Aligned_cols=245 Identities=25% Similarity=0.356 Sum_probs=198.0
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+|+..+.||+|+||.||+|.+..+++.|++|.+.... ....+.+|+.+++.++| +++..+..+.......++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQH-PNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCC-CCchheeeeEecCCeEEE
Confidence 5888999999999999999998889999999876433 23457889999999976 556666667777788999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+|||+ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||+|+||++ +.++.+||+|||++......
T Consensus 80 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 80 FLELVPGGSLAKLLKK-YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEEecCCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceecccc
Confidence 99999 7899988865 3468999999999999999999999999999999999999 47889999999998875443
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.. .....++..|+|||.+.... ++.++|+|||||++|+|++|..||...... .....+.... ...
T Consensus 156 ~~--------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~---~~~~~~~~~~---~~~ 221 (258)
T cd06632 156 SF--------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV---AAVFKIGRSK---ELP 221 (258)
T ss_pred cc--------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH---HHHHHHHhcc---cCC
Confidence 21 12456889999999998776 899999999999999999999999765422 2222221111 111
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+++.+.+++.+||..+|++||++++++.
T Consensus 222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 223455789999999999999999999998865
No 308
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8.1e-38 Score=305.37 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=201.3
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeee--eC
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGV--DG 75 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~--~~ 75 (423)
+..+.++|++.+.||+|+||.||+|.+..+++.||||.+... .....+.+|+.++..+.+++++..+..++. +.
T Consensus 2 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~ 81 (337)
T cd07852 2 DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND 81 (337)
T ss_pred CchhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC
Confidence 556789999999999999999999999988999999976432 223447789999999944455655555443 34
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...++||||+.++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++..
T Consensus 82 ~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 82 KDIYLVFEYMETDLHAVIRA--NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARS 156 (337)
T ss_pred ceEEEEecccccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhc
Confidence 46899999998899888764 378899999999999999999999999999999999999 4788999999999987
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH-----
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC----- 229 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~----- 229 (423)
......... ........|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.........+....
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 234 (337)
T cd07852 157 LSELEENPE--NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSA 234 (337)
T ss_pred ccccccccc--CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 654332110 011224568999999998865 457899999999999999999999997654332222111110
Q ss_pred ------------------hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 ------------------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......+.....+.++.++.++|.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 001111222333457889999999999999999999999876
No 309
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.4e-37 Score=293.96 Aligned_cols=251 Identities=26% Similarity=0.388 Sum_probs=198.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC------------chhHHHHHHHHHHHcCCCCCCeEEEeeeeC
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK------------HPQLLYEAKVYKILQGGSGIPNIKWYGVDG 75 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~------------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~ 75 (423)
+|.+.+.||.|+||.||+|.+..+++.||||.++.... .+.+..|+.++..+.| ++++.+..++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH-LNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCC-CCcceEEEEeccC
Confidence 68999999999999999999988899999997653211 1246779999999976 5566676777788
Q ss_pred CeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
+..++||||+ +++|.+++... ..++...+..++.||+.||.|||++|++||||+|+||++ +.++.++|+|||+++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~ 156 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISK 156 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeeccccc
Confidence 8999999999 88999988754 578999999999999999999999999999999999999 478899999999997
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
......... ......++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...... +.+..+....
T Consensus 157 ~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~ 228 (272)
T cd06629 157 KSDDIYDND-----QNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI---AAMFKLGNKR 228 (272)
T ss_pred ccccccccc-----ccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH---HHHHHhhccc
Confidence 654321111 112456889999999988655 789999999999999999999999754332 2222222221
Q ss_pred cCC-chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VST-PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
... ........++..+.++|.+||..+|++||++++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111 112233456889999999999999999999998865
No 310
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.1e-37 Score=301.82 Aligned_cols=257 Identities=19% Similarity=0.270 Sum_probs=196.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCC--CceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee----eCCe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDT--NEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV----DGED 77 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~--~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~----~~~~ 77 (423)
+|++.+.||+|+||.||+|++..+ +..||||.+.... ....+.+|+.+++.+.++++++.+..+.. ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 589999999999999999999877 8899999876432 23457889999999976677776654432 2345
Q ss_pred eEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 78 NVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 78 ~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
.+++|++++++|.+.+.. ...+++..++.++.||+.||+|||++||+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 81 ~~~~~e~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 81 LYLYEELMEADLHQIIRS-GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGFS 156 (332)
T ss_pred EEEEEecccCCHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceecc
Confidence 789999999999988864 4579999999999999999999999999999999999999 478899999999998765
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH-------
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC------- 229 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~------- 229 (423)
....... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||................
T Consensus 157 ~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 233 (332)
T cd07857 157 ENPGENA---GFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233 (332)
T ss_pred ccccccc---ccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 4322110 11224578999999998876 468999999999999999999999997644222111111100
Q ss_pred ----------------hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 ----------------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 ----------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......+........+..+.+++.+||+.||.+||++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 234 LSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000111222333445788999999999999999999999854
No 311
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.7e-38 Score=295.96 Aligned_cols=249 Identities=20% Similarity=0.309 Sum_probs=191.6
Q ss_pred ceeeecCceeEEEEEEcCCC------ceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 13 RKIGSGSFGEIFLASHVDTN------EIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~------~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+.||+|+||.||+|++.... +.||||.+.... ....+.+|+.+++.+.| +++..+..++......+++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNH-PNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCC-CCeeeEeeeecCCCCeEEEEe
Confidence 46899999999999986543 679999765443 34467889999999987 455556666667778999999
Q ss_pred cc-CCCHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC--CCCeEEEeecccee
Q 014544 84 LL-GPSLEDLFVYC------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR--KANQVYIIDFGLAK 154 (423)
Q Consensus 84 ~~-~~sL~~~l~~~------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~--~~~~vkL~DFGla~ 154 (423)
|+ +++|.+++... ...+++..++.++.||+.||.|||+++++|+||||+|||++.++ ....++|+|||+++
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~ 159 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLAR 159 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccc
Confidence 99 88999998642 13478899999999999999999999999999999999995211 12289999999997
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
........ .......++..|+|||.+.+..++.++|||||||++|+|++ |..||....... ....+... .
T Consensus 160 ~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~---~~~~~~~~-~ 230 (269)
T cd05044 160 DIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE---VLQHVTAG-G 230 (269)
T ss_pred cccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH---HHHHHhcC-C
Confidence 65433211 11223355788999999999899999999999999999998 999997654332 22222111 1
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
... ....+|..+.++|.+||..+|.+||++++|.+.|+
T Consensus 231 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 RLQ---KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccC---CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 111 12345889999999999999999999999998875
No 312
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.8e-38 Score=297.60 Aligned_cols=239 Identities=17% Similarity=0.238 Sum_probs=183.9
Q ss_pred eeeecCceeEEEEEEcCC------------------------CceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCe
Q 014544 14 KIGSGSFGEIFLASHVDT------------------------NEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPN 67 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~------------------------~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~ 67 (423)
.||+|+||.||+|....+ ...|++|++..... ...+.+|+.+++.+.| ++++.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h-~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSH-IHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCC-CCeee
Confidence 699999999999985321 13588898764332 2346778888888876 66777
Q ss_pred EEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc----CCC
Q 014544 68 IKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG----RKA 142 (423)
Q Consensus 68 i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~----~~~ 142 (423)
+..++......++||||+ +++|..++....+.+++..++.++.||+.||+|||++||+||||||+|||++.. ...
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~ 160 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS 160 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence 777788888999999999 788888876656679999999999999999999999999999999999999521 122
Q ss_pred CeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHH-hCCCCCCCchhhh
Q 014544 143 NQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAAT 220 (423)
Q Consensus 143 ~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~ell-tG~~Pf~~~~~~~ 220 (423)
..+||+|||++....... ...++..|+|||.+.+ ..++.++|||||||++|||+ +|..||.......
T Consensus 161 ~~~kl~d~g~~~~~~~~~-----------~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 161 PFIKLSDPGVSFTALSRE-----------ERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ceeeecCCcccccccccc-----------ccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 358999999986542211 2356788999998875 55899999999999999985 6999998754332
Q ss_pred hHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 221 KKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
... ........+ ...++.+.++|.+||+.+|++||++.+|++.|
T Consensus 230 ~~~----~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KER----FYEKKHRLP-----EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHH----HHHhccCCC-----CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 221 222222222 12356899999999999999999999998765
No 313
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.4e-37 Score=298.37 Aligned_cols=259 Identities=22% Similarity=0.285 Sum_probs=200.4
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeC---
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDG--- 75 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--- 75 (423)
.+..++|++.+.||+|+||.||+|.+..+++.||||+++.... ...+.+|+.+++.++|+ ++..+..++.+.
T Consensus 3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~-~i~~~~~~~~~~~~~ 81 (302)
T cd07864 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHR-NIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCC-CeeeeeheecCcchh
Confidence 4556889999999999999999999999999999998865432 23467899999999875 444454443332
Q ss_pred -------CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEe
Q 014544 76 -------EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 76 -------~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
...++++||+++++.+++......+++..++.++.||+.||.|||+.||+||||||+||++ ++.+.+||+
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~ 158 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLA 158 (302)
T ss_pred hhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeC
Confidence 3789999999888888887555579999999999999999999999999999999999999 478899999
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (423)
|||++......... ......++..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+..
T Consensus 159 dfg~~~~~~~~~~~------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 159 DFGLARLYNSEESR------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred cccccccccCCccc------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99999876543211 11133567889999988754 478999999999999999999999986554433333333
Q ss_pred HHhhccC----------------------CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 228 ICEKKVS----------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 228 i~~~~~~----------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+..... ......+..+|..+.+++..||..+|++||++++|+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2221111 0111223456899999999999999999999998865
No 314
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=323.13 Aligned_cols=262 Identities=18% Similarity=0.290 Sum_probs=220.3
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCC---ceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTN---EIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~---~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
|-....+|.+.||.|.||+|++|+.+..+ ..||||.++..... ..|+.|+.||-++.| ++|..+.........
T Consensus 626 Id~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH-PNIIrLEGVVTks~P 704 (996)
T KOG0196|consen 626 IDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH-PNIIRLEGVVTKSKP 704 (996)
T ss_pred cChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC-CcEEEEEEEEecCce
Confidence 34456689999999999999999988655 46999999876433 359999999999997 556677777778888
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+||+||| +|+|..+|....+.|+..+..-+++.|+.|++||-+.|+|||||..+|||+ +.+-.+|++|||+++.+
T Consensus 705 vMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvl 781 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL 781 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeec
Confidence 99999999 999999999888899999999999999999999999999999999999999 58889999999999988
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
.++.... | ......-..+|.|||.+.-..++.+||||||||+|||.+. |+.||.++++.+.. +.++..+..
T Consensus 782 edd~~~~---y-tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI----kaIe~gyRL 853 (996)
T KOG0196|consen 782 EDDPEAA---Y-TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI----KAIEQGYRL 853 (996)
T ss_pred ccCCCcc---c-cccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH----HHHHhccCC
Confidence 6654211 1 1112233579999999999999999999999999999876 99999998775433 333455666
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
|.+..| |..+.+||..||++|-.+||.|.+|+..|++++...
T Consensus 854 PpPmDC---P~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 854 PPPMDC---PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred CCCCCC---cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 655555 999999999999999999999999999999998653
No 315
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.5e-37 Score=295.50 Aligned_cols=252 Identities=21% Similarity=0.240 Sum_probs=196.3
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
|++.+.||.|++|.||+|.+..++..||||++..... ...+.+|+++++.++| ++++.+..++.+....+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~-~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNH-PNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCC-CCccCHhheeccCCeEEEEEec
Confidence 6789999999999999999998999999998765432 2357889999999986 5566666666677899999999
Q ss_pred cCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 LGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
++++|.+++.... ..+++..++.++.|++.||+|||+++++||||+|+||+++ .++.++|+|||+++.......
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 80 LDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred cCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccccccCCCcc--
Confidence 9889999887533 3689999999999999999999999999999999999994 688999999999976533221
Q ss_pred cccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH-------------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC------------- 229 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~------------- 229 (423)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||...........+.+..
T Consensus 155 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 155 -----TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred -----ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 11233568899999988764 47899999999999999999999998654322111111100
Q ss_pred --------hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 230 --------EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 230 --------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..............++..+.++|.+||+.+|++||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000011122233556789999999999999999999998864
No 316
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=4e-38 Score=295.38 Aligned_cols=244 Identities=28% Similarity=0.351 Sum_probs=198.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++| +++..+..+.......++|+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNH-PFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCC-CChHHHHHhhcCCCeEEEEE
Confidence 5899999999999999999999899999999876432 23457889999999977 55656655666788899999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +++|.+.+... ..+++..+..++.||+.||.|||++|++|+||+|+||++ ++++.++|+|||++........
T Consensus 80 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~ 155 (258)
T cd05578 80 DLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTL 155 (258)
T ss_pred eCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCcc
Confidence 999 88999888753 579999999999999999999999999999999999999 4788999999999887654321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
.....|+..|+|||.+.+..++.++||||||+++|+|++|..||................... ....
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~~~ 222 (258)
T cd05578 156 --------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETAD-----VLYP 222 (258)
T ss_pred --------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccc-----ccCc
Confidence 124568889999999998889999999999999999999999998755422222222211111 2223
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCCh--HHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDY--GFL 269 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~--~~l 269 (423)
..+|..+.++|.+||..+|.+||++ +++
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l 252 (258)
T cd05578 223 ATWSTEAIDAINKLLERDPQKRLGDNLKDL 252 (258)
T ss_pred ccCcHHHHHHHHHHccCChhHcCCccHHHH
Confidence 4568999999999999999999999 544
No 317
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.8e-37 Score=294.70 Aligned_cols=252 Identities=21% Similarity=0.272 Sum_probs=194.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeee--eCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGV--DGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~--~~~~~~lv 81 (423)
++|+..+.||.|++|.||+|.+..+++.||+|++..... ...+.+|+++++.+.|++ +..+..++. .....++|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPY-IVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCC-eeeeeeEEEccCCCeEEEE
Confidence 479999999999999999999999999999998775433 345889999999998654 444443332 34568999
Q ss_pred Eecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 82 LDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|||+ +++|.+++.. ....+++..+..++.||+.||.|||+.|++|+||+|+||++ +..+.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeecccccccc
Confidence 9999 8899888753 23458999999999999999999999999999999999999 477889999999987554
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchh--hhhHHHHHHHHhhccCC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKA--ATKKQKYDKICEKKVST 235 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~~~ 235 (423)
.... ....++..|+|||.+.+..++.++|||||||++|+|++|..||..... ....+....+.......
T Consensus 157 ~~~~---------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd06621 157 NSLA---------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE 227 (287)
T ss_pred cccc---------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchh
Confidence 3221 134678899999999998999999999999999999999999986422 11112222222111110
Q ss_pred chHHh--hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 236 PIEVL--CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 236 ~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..... ...+++.+.++|.+||..+|++||++.+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 228 LKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 00000 0124678999999999999999999999876
No 318
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.4e-37 Score=291.88 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=192.1
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
.....||+|+||.||+|++..++..|++|....... ...+.+|+.+++.++| +++..+..++...+..++++||+ +
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKH-RNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCC-CCeeeeeeeeccCCEEEEEEecCCC
Confidence 344689999999999999998899999998765432 3458899999999987 55556666677788899999999 7
Q ss_pred CCHHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 87 PSLEDLFVYCRRKF--SLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 87 ~sL~~~l~~~~~~l--~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
++|.+++......+ +...+..++.||+.||.|||++||+||||||+||+++ ...+.++|+|||++........
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~--- 164 (268)
T cd06624 90 GSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINP--- 164 (268)
T ss_pred CCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCC---
Confidence 89999887544455 8889999999999999999999999999999999994 2367899999999876543221
Q ss_pred ccccCCCCcccccCccccchhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||.+.+.. ++.++||||||+++|+|++|..||........ ... ........ .....
T Consensus 165 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~-~~~-~~~~~~~~---~~~~~ 235 (268)
T cd06624 165 ----CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA-AMF-KVGMFKIH---PEIPE 235 (268)
T ss_pred ----ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh-hHh-hhhhhccC---CCCCc
Confidence 112346789999999987644 78899999999999999999999976432211 111 11100111 11223
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+++++.+++.+||..+|++||++.+|+.
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 45789999999999999999999999865
No 319
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.9e-37 Score=292.89 Aligned_cols=242 Identities=20% Similarity=0.294 Sum_probs=191.0
Q ss_pred CceEEecee--eecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKI--GSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~L--g~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
++|++.+.+ |+|+||.||++....+++.+|+|+....... ..|......+.+++++..+..++...+..++||||
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~ 90 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---AIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDY 90 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---hhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEc
Confidence 567777776 9999999999999999999999987654321 12344444455667888888777788899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC-eEEEeeccceeeccCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN-QVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~-~vkL~DFGla~~~~~~~~~ 162 (423)
+ +++|.+++... ..+++..++.++.||+.||.|||+.|++||||||+||++. .++ .++|+|||++.......
T Consensus 91 ~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~~~~-- 164 (267)
T PHA03390 91 IKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIGTPS-- 164 (267)
T ss_pred CCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecCCCc--
Confidence 9 89999998753 4799999999999999999999999999999999999995 555 89999999987654321
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh-HHHHHHHHhhccCCchHHhh
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-KQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~~~ 241 (423)
...++..|+|||++.+..++.++|||||||++|+|++|..||........ ...+.... ..+. ...
T Consensus 165 ---------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~-~~~ 230 (267)
T PHA03390 165 ---------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ----QKKL-PFI 230 (267)
T ss_pred ---------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh----cccC-Ccc
Confidence 34678999999999998899999999999999999999999985432211 11111111 1111 122
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCC-hHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPD-YGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt-~~~l~~ 271 (423)
+..++.+.++|.+||+.+|.+||+ ++++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 231 KNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 356899999999999999999995 587764
No 320
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.1e-37 Score=292.58 Aligned_cols=242 Identities=22% Similarity=0.349 Sum_probs=191.5
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||.|+||.||+|.+..+++.||||++..... ...+..|..++.....++++..+..++...+..+++|||+ +
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 579999999999999998999999998764321 1224455555555545677777777777888999999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
++|.+++.. ...+++..+..++.||+.||.|||+.|++||||+|+||++ +..+.++|+|||++......
T Consensus 82 ~~L~~~l~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~------- 150 (260)
T cd05611 82 GDCASLIKT-LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLEN------- 150 (260)
T ss_pred CCHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceecccc-------
Confidence 899998875 3568999999999999999999999999999999999999 47889999999998764321
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChH
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPA 246 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 246 (423)
....++..|+|||.+.+..++.++||||||+++|+|++|..||...... +.+..+.......+. .....++.
T Consensus 151 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~ 222 (260)
T cd05611 151 ----KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD---AVFDNILSRRINWPE-EVKEFCSP 222 (260)
T ss_pred ----ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH---HHHHHHHhcccCCCC-cccccCCH
Confidence 2346788999999999888999999999999999999999999765433 333333333322221 12235689
Q ss_pred HHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 247 EFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 247 ~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
++.++|.+||..+|++||++..+.+++
T Consensus 223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 223 EAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 999999999999999999876555544
No 321
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.3e-37 Score=295.44 Aligned_cols=252 Identities=23% Similarity=0.276 Sum_probs=200.9
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
|++.+.||.|++|.||+|.+..+++.+++|.+..... ...+..|+.+++.+.| +++..+..+.......+++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNH-PNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcC-CCcchHHHhhccCCCEEEEEec
Confidence 6788999999999999999988999999998765432 3457889999999985 5666666666677899999999
Q ss_pred cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 85 LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 85 ~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+.++|.+++......+++..++.++.||+.||.|||++||+|+||||+||++ +.++.++|+|||.+........
T Consensus 80 ~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~--- 153 (283)
T cd05118 80 MDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVR--- 153 (283)
T ss_pred cCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCcc---
Confidence 9889999888766689999999999999999999999999999999999999 4778999999999987755431
Q ss_pred ccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh------------
Q 014544 165 IPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK------------ 231 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------------ 231 (423)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...+..+...........
T Consensus 154 ----~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05118 154 ----PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL 229 (283)
T ss_pred ----cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh
Confidence 11234678899999999877 6899999999999999999999999765433222111111000
Q ss_pred ----------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 ----------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ----------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
............++.++.++|.+||..||.+||++.+|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0011112233456889999999999999999999998865
No 322
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.1e-38 Score=299.53 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=197.8
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+++++.+.| ++++.+..++......++|||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCC-CccHhhhcccccCCceEEEEE
Confidence 467888999999999999999988899999998764432 2357889999999876 556666666677888999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++. ...+++..+..++.||+.||.|||++|++|+||+|+||+++ .++.++|+|||++........
T Consensus 83 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 83 YLGGGSALDLLK--PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred ccCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccccccCcch-
Confidence 99 788888775 45689999999999999999999999999999999999994 778999999999976543221
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
......++..|+|||.+.+..++.++|||||||++|||++|..||......... ..+.... . .....
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~-~---~~~~~ 223 (277)
T cd06642 157 ------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVL---FLIPKNS-P---PTLEG 223 (277)
T ss_pred ------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHH---hhhhcCC-C---CCCCc
Confidence 112346788999999999988999999999999999999999999764432211 1111111 1 11223
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+..+.+++.+||..+|++||++.+|+.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 45788999999999999999999999977
No 323
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=301.23 Aligned_cols=266 Identities=21% Similarity=0.306 Sum_probs=211.3
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCC-----CCCeEEEeeeeC
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGS-----GIPNIKWYGVDG 75 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~-----~i~~i~~~~~~~ 75 (423)
++++.++|++.+.+|+|.||.|-.+.+..++..|||||++.-.. .+..+-|+++++++.+.. -+..+..++...
T Consensus 84 gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 84 GDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 56788999999999999999999999999999999999876543 344678999999995432 233345567778
Q ss_pred CeeEEEEeccCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC--------------
Q 014544 76 EDNVLVLDLLGPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR-------------- 140 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~-------------- 140 (423)
+..|||+|.+|.++.+++... -..++...+..++.|++++++|||+.+++|-||||+|||+..++
T Consensus 164 ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 164 GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence 899999999999999999753 34699999999999999999999999999999999999995221
Q ss_pred ---CCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCch
Q 014544 141 ---KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLK 217 (423)
Q Consensus 141 ---~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~ 217 (423)
....|+|+|||.|..-.+.. ...+.|..|.|||++.|-.++.++||||+||||+||++|...|+...
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe 313 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE 313 (415)
T ss_pred ccCCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC
Confidence 13468999999998755443 26688999999999999999999999999999999999999999877
Q ss_pred hhhhHHHHHHHHhhccCCchHHh----------------------------hc----------cChHHHHHHHHHHHcCC
Q 014544 218 AATKKQKYDKICEKKVSTPIEVL----------------------------CK----------SHPAEFASYFHYCQSLT 259 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~----------------------------~~----------~~~~~l~~li~~cl~~d 259 (423)
+.+....+++|++.....-+... |+ .--.++.+||+.||..|
T Consensus 314 n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD 393 (415)
T KOG0671|consen 314 NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD 393 (415)
T ss_pred cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC
Confidence 66655555555441110000000 00 00235899999999999
Q ss_pred CCCCCChHHHHHHHHHHHHh
Q 014544 260 FDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 260 P~~RPt~~~l~~~L~~~~~~ 279 (423)
|.+|+|+.|.+. +.+|..
T Consensus 394 P~~RiTl~EAL~--HpFF~~ 411 (415)
T KOG0671|consen 394 PARRITLREALS--HPFFAR 411 (415)
T ss_pred ccccccHHHHhc--CHHhhc
Confidence 999999998854 565543
No 324
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.2e-37 Score=291.49 Aligned_cols=247 Identities=23% Similarity=0.294 Sum_probs=198.5
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||.|+||.||+|.+..++..||+|.+... .....+.+|+.+++.++| +++..+..+.......++++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH-PNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCC-CChhhhhheeccCCeEEEEEe
Confidence 589999999999999999999999999999987643 234467899999999987 455556556667788999999
Q ss_pred cc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 84 LL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|+ +++|.+++.... ..+++..+..++.||+.||.|||+.+++|+||||+||+++ ++...++|+|||.+........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS--KNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc--CCCCeEEecccccchhccCCcc
Confidence 99 889999886533 3589999999999999999999999999999999999995 2334679999999987654321
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLC 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (423)
. .....|+..|+|||.+.+..++.++||||||+++|+|++|..||...... +....+...... ...
T Consensus 158 ~-------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~----~~~ 223 (257)
T cd08225 158 L-------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH---QLVLKICQGYFA----PIS 223 (257)
T ss_pred c-------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHhcccCC----CCC
Confidence 1 12346889999999999888999999999999999999999999764332 222223222221 122
Q ss_pred ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 242 KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 242 ~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..++.++.++|.+||..+|++||++.+|++
T Consensus 224 ~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 224 PNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 355789999999999999999999999865
No 325
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.7e-37 Score=292.84 Aligned_cols=250 Identities=20% Similarity=0.340 Sum_probs=198.0
Q ss_pred ceEEeceeeecCceeEEEEEEcC-CCceEEEEEecCCC------------CchhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGT------------KHPQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~-~~~~vaiKi~~~~~------------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
.|++.+.||+|+||.||+|.+.. +++.+|+|.+.... ....+..|+.++.....++++..+..++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48899999999999999999987 67889999765321 112356677777765455777777777778
Q ss_pred CCeeEEEEecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCCCeEEEee
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
....+++|||+ +++|.+++.. ....+++..++.++.|++.||.|||+ .|++|+||+|+|||+ +..+.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence 88999999999 7899988753 24468999999999999999999996 789999999999999 4788999999
Q ss_pred ccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHH
Q 014544 150 FGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIC 229 (423)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~ 229 (423)
||++........ .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+.
T Consensus 158 fg~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~---~~~~~~~ 226 (269)
T cd08528 158 FGLAKQKQPESK--------LTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML---SLATKIV 226 (269)
T ss_pred ccceeecccccc--------cccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH---HHHHHHh
Confidence 999987554321 12456889999999999888999999999999999999999999764332 2222232
Q ss_pred hhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 230 EKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
..... +.. ...+++.+.++|.+||+.||++||++.++...+.
T Consensus 227 ~~~~~-~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 EAVYE-PLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred hccCC-cCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 32222 111 1245789999999999999999999999988764
No 326
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.9e-38 Score=300.59 Aligned_cols=247 Identities=20% Similarity=0.306 Sum_probs=197.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..|.....||+|+||.||+|.+..+++.||||++.... ....+.+|+.++..+.| +++..+..++...+..+++|||
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH-QNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCC-CchhhhhhheeeCCeEEEEEec
Confidence 34566778999999999999998889999999875432 33457889999999876 5566666666678899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|..++. ...+++..++.++.||+.||.|||++|++||||||+||++ +.++.++|+|||++..+.....
T Consensus 100 ~~~~~L~~~~~--~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~~-- 172 (297)
T cd06659 100 LQGGALTDIVS--QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP-- 172 (297)
T ss_pred CCCCCHHHHHh--hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhcccccc--
Confidence 9 788888765 3568999999999999999999999999999999999999 4788999999999875543221
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... +.+..+.... .+.......
T Consensus 173 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~--~~~~~~~~~ 242 (297)
T cd06659 173 -----KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV---QAMKRLRDSP--PPKLKNAHK 242 (297)
T ss_pred -----cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhccC--CCCccccCC
Confidence 112457899999999999888999999999999999999999999764432 2222222211 111112245
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
++..+.++|.+||..+|++||++++|++
T Consensus 243 ~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 243 ISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 6789999999999999999999999877
No 327
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=3.1e-37 Score=286.68 Aligned_cols=247 Identities=25% Similarity=0.413 Sum_probs=201.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
.|++.+.||+|++|.||+|.+..+++.|++|++.... ....+.+|+++++.+.| +++..+..++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKH-PNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCC-CCEeEEEEEEecCCeEEEEEecC
Confidence 4889999999999999999998889999999987665 45668899999999985 66666766777778899999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+++......+++..+..++.|++.||.|||++|++||||+|+||+++ +++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccccccccccc---
Confidence 6999998876546799999999999999999999999999999999999994 688999999999877654321
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
.....++..|+|||.+.+..++.++||||||+++|+|++|..||........... ..... .+.......+
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~--~~~~~~~~~~ 223 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFK---IATNG--PPGLRNPEKW 223 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHH---HHhcC--CCCcCccccc
Confidence 1245788999999999988899999999999999999999999986533222211 11111 1111111223
Q ss_pred hHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+..+.++|.+||..||++||++.++++
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 788999999999999999999998864
No 328
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.9e-37 Score=301.18 Aligned_cols=266 Identities=20% Similarity=0.259 Sum_probs=200.9
Q ss_pred CCccccCceEE-eceeeecCceeEEEEEEcCCCceEEEEEecCCCCch----------------hHHHHHHHHHHHcCCC
Q 014544 1 MERIIGVKYKL-GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP----------------QLLYEAKVYKILQGGS 63 (423)
Q Consensus 1 m~~ii~~~y~i-~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~----------------~~~~E~~~l~~l~~~~ 63 (423)
|..-+.++|.. .+.||.|+||+||+|.+..+++.||||++....... .+.+|++++..+.| +
T Consensus 2 ~~~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~ 80 (335)
T PTZ00024 2 MSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH-E 80 (335)
T ss_pred CccccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC-c
Confidence 34456678864 577999999999999999899999999876433221 46789999999987 5
Q ss_pred CCCeEEEeeeeCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC
Q 014544 64 GIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN 143 (423)
Q Consensus 64 ~i~~i~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~ 143 (423)
++..+..++...+..+++|||+.++|.+++.. ...+++..+..++.||+.||+|||++||+||||+|+||++ +..+
T Consensus 81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~ 156 (335)
T PTZ00024 81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDR-KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKG 156 (335)
T ss_pred ceeeeeEEEecCCcEEEEEeccccCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCC
Confidence 56666666777889999999998899998864 4569999999999999999999999999999999999999 4788
Q ss_pred eEEEeeccceeeccCCCCCCcc-------cccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCC
Q 014544 144 QVYIIDFGLAKKYRDPTTNRHI-------PYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG 215 (423)
Q Consensus 144 ~vkL~DFGla~~~~~~~~~~~~-------~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~ 215 (423)
.++|+|||++............ .........++..|+|||.+.+.. ++.++|||||||++|+|++|..||.+
T Consensus 157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 236 (335)
T PTZ00024 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG 236 (335)
T ss_pred CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999999999876522111000 000111335688899999987654 68999999999999999999999987
Q ss_pred chhhhhHHHHHHHHhhcc--------------------CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 216 LKAATKKQKYDKICEKKV--------------------STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 216 ~~~~~~~~~~~~i~~~~~--------------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.........+........ ...........+..+.++|.+||..+|++||++++++.
T Consensus 237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 554322222111111000 00111222345788999999999999999999999865
No 329
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=314.54 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=204.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC-C--ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT-N--EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~-~--~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
.++.++.++||+|.||.|++|.|... | ..||||+++.+.. ...|++|+.+|.+|+| +++..++....+ ....
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H-~hliRLyGvVl~-qp~m 186 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH-PHLIRLYGVVLD-QPAM 186 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC-cceeEEeeeecc-chhh
Confidence 45667889999999999999999742 2 3599999887654 3569999999999998 444444443333 6788
Q ss_pred EEEecc-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 80 LVLDLL-GPSLEDLFVY-CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
||||++ .|+|.+.+.. ....|-......++.||+.||.||.++++|||||..+|+|+. ....|||+|||+.+.+.
T Consensus 187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRALG 263 (1039)
T ss_pred HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceeccC
Confidence 999999 9999999987 455688999999999999999999999999999999999994 67899999999999887
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
..... |.......-...|+|||.+.-..++.++|||+|||++|||++ |+.||.+.......+.++ .+...+
T Consensus 264 ~ned~----Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD----~~erLp 335 (1039)
T KOG0199|consen 264 ENEDM----YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID----AGERLP 335 (1039)
T ss_pred CCCcc----eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc----ccccCC
Confidence 65543 222334445678999999999999999999999999999999 999999987765444443 333334
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+.. +|+.+.+++..||..+|++||+|..|++
T Consensus 336 RPk~---csedIY~imk~cWah~paDRptFsair~ 367 (1039)
T KOG0199|consen 336 RPKY---CSEDIYQIMKNCWAHNPADRPTFSAIRE 367 (1039)
T ss_pred CCCC---ChHHHHHHHHHhccCCccccccHHHHHH
Confidence 3333 4999999999999999999999999974
No 330
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-39 Score=300.33 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=212.8
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCe
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQGGSGIPNIKWYGVDGED 77 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~ 77 (423)
+|-..+|.++..||.|+||.|.+|..+.+.+.+|||+++++... +--+.|-++|.....++.+..++.+++.-+.
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 45567899999999999999999999999999999998876432 2246788888877788888888999999999
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
+|+||||+ ||+|--.+++ -+++.+..+..++..|+-||-+||++|||+||||.+|||+ |..+.+||+|||+++.-
T Consensus 425 LyFVMEyvnGGDLMyhiQQ-~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQ-VGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKEN 500 (683)
T ss_pred eeeEEEEecCchhhhHHHH-hcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeeccccccc
Confidence 99999999 8888777765 5679999999999999999999999999999999999999 69999999999999864
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
.-... ...+++||+.|+|||++..++|+..+|+|||||+||||+.|+.||.+.+ ..+.+..|.+.....|
T Consensus 501 i~~~~-------TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD---E~elF~aI~ehnvsyP 570 (683)
T KOG0696|consen 501 IFDGV-------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED---EDELFQAIMEHNVSYP 570 (683)
T ss_pred ccCCc-------ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC---HHHHHHHHHHccCcCc
Confidence 33222 3458899999999999999999999999999999999999999999854 4477778888888777
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
+.++.+..+++...|.+.|.+|...
T Consensus 571 -----KslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 571 -----KSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred -----ccccHHHHHHHHHHhhcCCccccCC
Confidence 5568999999999999999999643
No 331
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-39 Score=302.79 Aligned_cols=247 Identities=21% Similarity=0.277 Sum_probs=204.6
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+-.+.|..-+.||+||||+||-++-+.||+.||+|.+.+. ....-.+.|..+|.++... .|+.+.+.+...+..
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~-FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSP-FIVSLAYAFETKDAL 260 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccC-cEEEEeeeecCCCce
Confidence 4457789999999999999999999999999999965543 2333468899999998864 666777777788999
Q ss_pred EEEEecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 79 VLVLDLL-GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
|+||..| ||+|.-.+-..+ ..|++..+..++.+|+.||++||..+||+|||||+|||+ |+.|+|.|+|+|+|..+
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEec
Confidence 9999999 888876665433 469999999999999999999999999999999999999 79999999999999988
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
...... ...+||..|||||++.+..|+...|+|||||++|||+.|+-||.........+.+++ +....
T Consensus 338 ~~g~~~--------~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdr----r~~~~ 405 (591)
T KOG0986|consen 338 PEGKPI--------RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDR----RTLED 405 (591)
T ss_pred CCCCcc--------ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHH----HHhcc
Confidence 765532 245899999999999999999999999999999999999999987554433333222 22222
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
...+...++++.++|.+.+|.+||.+|...
T Consensus 406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 334446779999999999999999999754
No 332
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.1e-37 Score=293.17 Aligned_cols=240 Identities=24% Similarity=0.296 Sum_probs=185.2
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-----~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
.||+|+||.||+|.+..+++.||||++...... .....|..+++.+. +++++..+..++...+..++||||+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999989999999987643211 12344555554443 3456666666677788899999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
+++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||||+||++ +.++.++|+|||++..+....
T Consensus 81 g~~L~~~l~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~----- 151 (278)
T cd05606 81 GGDLHYHLSQ-HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK----- 151 (278)
T ss_pred CCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-----
Confidence 8888887764 4579999999999999999999999999999999999999 477899999999987653321
Q ss_pred cccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 166 PYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
.....|+..|+|||.+.+. .++.++|||||||++|+|++|+.||..................... +...+
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 222 (278)
T cd05606 152 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE-----LPDSF 222 (278)
T ss_pred ----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC-----CCCcC
Confidence 1244789999999999754 6899999999999999999999999875332222222111111111 22345
Q ss_pred hHHHHHHHHHHHcCCCCCCC-----ChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRP-----DYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RP-----t~~~l~~ 271 (423)
+.++.+++.+||..+|.+|| ++.++++
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 88999999999999999999 8887754
No 333
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.4e-37 Score=290.67 Aligned_cols=240 Identities=21% Similarity=0.280 Sum_probs=192.4
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||.|+||.||+|++..+++.||+|++.... ....+.+|+++++.+.| +++..+..+..++...+++|||+ +++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNH-PFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCC-CCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 689999999999999889999999876433 23458889999999976 55656666667788899999998 889
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++.. ...++...+..++.||+.||.|||++|++|+||+|+||++ +.++.++|+|||++........
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~------- 148 (262)
T cd05572 80 LWTILRD-RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQK------- 148 (262)
T ss_pred HHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccc-------
Confidence 9998875 3468999999999999999999999999999999999999 4788999999999987654321
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEF 248 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 248 (423)
.....++..|+|||.+.+..++.++|+||||+++|+|++|..||..... +....+..+.........+ ...++++
T Consensus 149 -~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~ 223 (262)
T cd05572 149 -TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE-DPMEIYNDILKGNGKLEFP---NYIDKAA 223 (262)
T ss_pred -cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC-CHHHHHHHHhccCCCCCCC---cccCHHH
Confidence 1234678899999999888899999999999999999999999987542 1223333333211111111 2237899
Q ss_pred HHHHHHHHcCCCCCCCC-----hHHHHH
Q 014544 249 ASYFHYCQSLTFDQRPD-----YGFLKR 271 (423)
Q Consensus 249 ~~li~~cl~~dP~~RPt-----~~~l~~ 271 (423)
.++|.+||..+|++||+ ++++++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 99999999999999999 666654
No 334
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.5e-37 Score=287.63 Aligned_cols=252 Identities=27% Similarity=0.418 Sum_probs=199.1
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|+||.||+|.+..+++.|++|++..... ...+..|+.+++.++| +++..+..+....+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKH-PNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCC-CChhheeeeEecCCEEEEEEe
Confidence 69999999999999999999988899999998776543 3457889999999977 556666666777888999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++ ..+.+||+|||++.........
T Consensus 80 ~~~~~~L~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 80 YCSGGTLEELLEH-GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred cCCCCcHHHHHhh-cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEcccccccccCCCCCc
Confidence 99 7899998875 34589999999999999999999999999999999999994 6889999999999876544321
Q ss_pred CcccccCCCCcccccCccccchhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
... ......++..|+|||.+.+.. ++.++||||||+++|+|++|..||...... ......+.. ......+
T Consensus 156 ~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~--~~~~~~~~~-~~~~~~~- 228 (264)
T cd06626 156 MGE---EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--FQIMFHVGA-GHKPPIP- 228 (264)
T ss_pred ccc---cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch--HHHHHHHhc-CCCCCCC-
Confidence 110 012356789999999998766 889999999999999999999999765321 111111221 1111111
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+..+.++|..||+.+|.+||++.+|+.
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 229 DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11234788999999999999999999998854
No 335
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.7e-39 Score=314.12 Aligned_cols=253 Identities=21% Similarity=0.329 Sum_probs=207.6
Q ss_pred Cce-EEeceeeecCceeEEEEEEcCCCceEEE---E---EecCCCCchhHHHHHHHHHHHcCCCCCCeEEEe-eeeCCee
Q 014544 7 VKY-KLGRKIGSGSFGEIFLASHVDTNEIVAV---K---IENSGTKHPQLLYEAKVYKILQGGSGIPNIKWY-GVDGEDN 78 (423)
Q Consensus 7 ~~y-~i~~~Lg~G~fg~Vy~a~~~~~~~~vai---K---i~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~-~~~~~~~ 78 (423)
++| ++...||+|+|-+||+|.|..+|..||- | +.+.....++|..|+++|+.|+|.+++..+..+ .......
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence 344 6778999999999999999988887763 3 233444456799999999999986655554333 3344557
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~g--iiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
.+|+|++ .|+|..++++ .++++.+.+..|++||+.||.|||++. |||||||.+||||+ ...|.|||+|+|+|..
T Consensus 119 n~iTEL~TSGtLr~Y~kk-~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKK-HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATL 195 (632)
T ss_pred eeeeecccCCcHHHHHHH-hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHH
Confidence 8999999 9999999986 457999999999999999999999985 99999999999997 6789999999999998
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCC
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVST 235 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~ 235 (423)
...... ...+|||.|||||++. ..|+..+||||||++|+||+|+.+||.... ...+.|.++..+..+.
T Consensus 196 ~r~s~a---------ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~--n~AQIYKKV~SGiKP~ 263 (632)
T KOG0584|consen 196 LRKSHA---------KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT--NPAQIYKKVTSGIKPA 263 (632)
T ss_pred hhcccc---------ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC--CHHHHHHHHHcCCCHH
Confidence 876553 2579999999999998 679999999999999999999999998754 4468888887776554
Q ss_pred chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 236 PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 236 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.... --.+++++||.+||.. ..+||++.+|+. +.+|...
T Consensus 264 sl~k---V~dPevr~fIekCl~~-~~~R~sa~eLL~--d~Ff~~d 302 (632)
T KOG0584|consen 264 ALSK---VKDPEVREFIEKCLAT-KSERLSAKELLK--DPFFDED 302 (632)
T ss_pred Hhhc---cCCHHHHHHHHHHhcC-chhccCHHHHhh--Chhhccc
Confidence 4333 3378999999999999 999999999865 5555543
No 336
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=5e-37 Score=300.50 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=191.3
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeee------
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVD------ 74 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~------ 74 (423)
+.++|.+.+.||+|+||.||+|.+..+++.||||++.... ....+.+|+.+++.+.|.+.+ .+..++..
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~ 91 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVI-GLLDVFTSAVSGDE 91 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCcc-chhheecccccCCC
Confidence 4679999999999999999999999899999999876432 223478899999999875544 44333322
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....++||||+..+|..+. ...+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 92 ~~~~~lv~e~~~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~~~ 165 (342)
T cd07879 92 FQDFYLVMPYMQTDLQKIM---GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGLAR 165 (342)
T ss_pred CceEEEEecccccCHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCCCc
Confidence 2356999999987777654 3468999999999999999999999999999999999999 478899999999987
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh---
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE--- 230 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~--- 230 (423)
...... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.........+.....
T Consensus 166 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 166 HADAEM----------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred CCCCCC----------CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 543211 13467889999999876 4588999999999999999999999987543221111111000
Q ss_pred -----------------h---ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 -----------------K---KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 -----------------~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
. .............+..+.++|.+||+.||++||++++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 0001111222345778999999999999999999999965
No 337
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.7e-37 Score=297.18 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=201.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.++|++.+.||+|+||.||+|.+..++..||+|.+.... ....+.+|+.+++.+.| +++..+..++...+..++|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-p~i~~~~~~~~~~~~~~lv~e 96 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKH-PNIVNYLDSYLVGDELWVVME 96 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCC-CCeeehhheeeeCCcEEEEEe
Confidence 478999999999999999999998889999999875432 33457889999999876 566666666677888999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++.. ..+++..+..++.|++.||.|||++|++||||||+||+++ .++.++|+|||++.........
T Consensus 97 ~~~~~~L~~~~~~--~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~~~~~~~~~ 171 (293)
T cd06647 97 YLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCAQITPEQSK 171 (293)
T ss_pred cCCCCcHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCcceecccccccc
Confidence 99 8899988763 4588999999999999999999999999999999999994 6789999999998765433221
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....+++.|+|||.+.+..++.++|||||||++|+|++|+.||...+.... +..+... ..+......
T Consensus 172 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~---~~~~~~~--~~~~~~~~~ 239 (293)
T cd06647 172 -------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATN--GTPELQNPE 239 (293)
T ss_pred -------cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh---eeehhcC--CCCCCCCcc
Confidence 1234688999999999988899999999999999999999999976433211 1111111 111111123
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
.++..+.++|.+||..+|++||++++|+. ++++..
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~--h~~~~~ 274 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQ--HPFLKI 274 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc--CHHHhc
Confidence 35788999999999999999999999865 455543
No 338
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.7e-37 Score=299.78 Aligned_cols=249 Identities=21% Similarity=0.305 Sum_probs=194.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeC-----
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDG----- 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~----- 75 (423)
+.++|++.+.||+|+||.||+|.+..++..||||++..... ...+.+|+.+++.+.|++.+..+..+..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 56889999999999999999999999999999998754322 234778999999998755444333333222
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...++||||++++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++ ..+.++|+|||++..
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~~~ 167 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMK--HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ 167 (343)
T ss_pred ceEEEEEecCCCCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccccc
Confidence 2468999999999988876 35699999999999999999999999999999999999994 788999999999876
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
..... ....+++.|+|||.+.+ ..++.++|||||||++|+|++|..||.+...... +..++.....
T Consensus 168 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~---~~~~~~~~~~ 234 (343)
T cd07880 168 TDSEM----------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ---LMEIMKVTGT 234 (343)
T ss_pred cccCc----------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCC
Confidence 53321 13467889999999876 4588999999999999999999999986543221 1111111100
Q ss_pred --------------------------CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 235 --------------------------TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 235 --------------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.........+++.+.++|.+||..||++||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 235 PSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111223456788999999999999999999999875
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=4.1e-37 Score=292.35 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=195.8
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeC--CeeEEEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDNVLVL 82 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~~lv~ 82 (423)
|++.+.||.|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+.|. ++..+..+.... ...++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~-~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHP-NIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCC-CeeeheeeEecCCCCcEEEEe
Confidence 789999999999999999999889999999887553 223578899999999864 454554444444 7899999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
||+.++|.+++......+++..++.++.||+.||+|||++|++|+||||+|||+ ++++.++|+|||++.........
T Consensus 80 e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~~~ 156 (287)
T cd07840 80 EYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRNSA 156 (287)
T ss_pred ccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCCcc
Confidence 999889999887654679999999999999999999999999999999999999 47889999999999876554321
Q ss_pred CcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc--------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV-------- 233 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-------- 233 (423)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...........+...+....
T Consensus 157 ------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (287)
T cd07840 157 ------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVS 230 (287)
T ss_pred ------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccc
Confidence 11133567889999987754 578999999999999999999999986554322222211111000
Q ss_pred --------------CCchHHhhcc-ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 --------------STPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 --------------~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.......... ++..+.+++.+||..+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 231 KLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred cchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000111122 3788999999999999999999998865
No 340
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=7.5e-37 Score=295.60 Aligned_cols=244 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
..|...+.||+|+||.||+|++..+++.|++|++..... ...+..|+++++.++| +++..+..++.+....++|
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~iv~~~~~~~~~~~~~lv 99 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKH-PNTIEYKGCYLKEHTAWLV 99 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCC-CCCccEEEEEEeCCEEEEE
Confidence 457778889999999999999998999999998764322 2347789999999976 5666777777788899999
Q ss_pred EeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 82 LDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 82 ~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
|||+.+++.+++......+++.+++.++.||+.||.|||++|++|+||+|+||++ +.++.++|+|||++.....
T Consensus 100 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 100 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC---
Confidence 9999889999887666779999999999999999999999999999999999999 4778999999999854321
Q ss_pred CCcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
.....|+..|+|||.+. +..++.++|||||||++|+|++|..||......... ..+...... .
T Consensus 174 --------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~---~~~~~~~~~---~ 239 (313)
T cd06633 174 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQNDSP---T 239 (313)
T ss_pred --------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH---HHHHhcCCC---C
Confidence 12456889999999985 355888999999999999999999999875433222 222211111 1
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+.+++.+||+.+|.+||++.+++.
T Consensus 240 ~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 240 LQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 112345778999999999999999999998864
No 341
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.2e-37 Score=292.25 Aligned_cols=252 Identities=23% Similarity=0.319 Sum_probs=196.4
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
|++.+.||+|+||.||+|.+..+++.|+||.+..... .....+|+..+..+.+++++..+..++......++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 7889999999999999999988899999998765422 2235678888999984566666666666788999999999
Q ss_pred CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 GPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 ~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+.+.... ..+++..++.++.|++.||.|||++|++|+||+|+||++ ++.+.++|+|||++........
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~--- 154 (283)
T cd07830 81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP--- 154 (283)
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC---
Confidence 999999887643 468999999999999999999999999999999999999 4789999999999986644321
Q ss_pred ccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc-----------
Q 014544 165 IPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK----------- 232 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~----------- 232 (423)
.....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||......+............
T Consensus 155 -----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 -----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred -----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 123467889999998854 457899999999999999999999997654433222211111110
Q ss_pred -----------cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 -----------VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 -----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
............+..+.++|.+||..+|++||++++|+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 001111222233678999999999999999999998864
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4.6e-37 Score=296.39 Aligned_cols=246 Identities=20% Similarity=0.295 Sum_probs=196.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~ 79 (423)
....|+..+.||+|+||.||+|++..+++.||||.+.... ....+.+|+++++.+.|+ ++..+..+.......+
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-~i~~~~~~~~~~~~~~ 91 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHP-NTIQYRGCYLREHTAW 91 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCC-CcccEEEEEEcCCeeE
Confidence 3456888999999999999999999899999999875321 123467899999999764 5555656666778899
Q ss_pred EEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 80 LVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 80 lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+||||+.+++.+++......+++..+..++.|++.||.|||+++++||||||+|||+ +.++.++|+|||++......
T Consensus 92 lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecCc
Confidence 999999889988887666679999999999999999999999999999999999999 46789999999998765432
Q ss_pred CCCCcccccCCCCcccccCccccchhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG---IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.......... .+........
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~ 234 (308)
T cd06634 169 -----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---HIAQNESPAL 234 (308)
T ss_pred -----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH---HHhhcCCCCc
Confidence 13467889999999853 457889999999999999999999997754332211 2222111111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....++..+.++|.+||..+|++||++++++.
T Consensus 235 ---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~ 266 (308)
T cd06634 235 ---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (308)
T ss_pred ---CcccccHHHHHHHHHHhhCCcccCCCHHHHhh
Confidence 12345788999999999999999999998876
No 343
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.5e-37 Score=300.74 Aligned_cols=255 Identities=20% Similarity=0.248 Sum_probs=198.9
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeC-----Cee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDG-----EDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~-----~~~ 78 (423)
+|++.+.||.|+||.||+|++..+++.||||.+.... ....+.+|+.+++.++| +++..+..+.... ...
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRH-ENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCC-cchhhhhhhhcccCcccccce
Confidence 6999999999999999999998889999999876532 34568899999999986 4455554444333 368
Q ss_pred EEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 79 VLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.++|+|||++.....
T Consensus 80 ~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 80 YIVTELMETDLHKVIKS-PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEEecchhhhHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeecc
Confidence 99999998888888764 4479999999999999999999999999999999999999 4779999999999987655
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh------
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK------ 231 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------ 231 (423)
..... .......++..|+|||.+.+. .++.++|||||||++|+|++|..||.+.........+......
T Consensus 156 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 156 DEDEK----GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred ccccc----ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence 43110 012244678899999999988 7899999999999999999999999875543222221111100
Q ss_pred -----------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 -----------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 -----------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+.......++..+.++|.+||+.+|++||++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0011112223446889999999999999999999999875
No 344
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=9.1e-37 Score=299.06 Aligned_cols=259 Identities=21% Similarity=0.294 Sum_probs=196.2
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeee-----e
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGV-----D 74 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~ 74 (423)
.+.++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.++..++|.+.+..+..+.. .
T Consensus 14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccc
Confidence 35689999999999999999999999899999999876532 12457789999999987554444333322 1
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
....++++++++++|.+++. ...+++..++.++.||+.||+|||++||+||||||+||++ ++++.+||+|||+++
T Consensus 94 ~~~~~lv~~~~~~~L~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~~~ 168 (345)
T cd07877 94 FNDVYLVTHLMGADLNNIVK--CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLAR 168 (345)
T ss_pred cccEEEEehhcccCHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEecccccc
Confidence 23478999999999988775 3469999999999999999999999999999999999999 478899999999987
Q ss_pred eccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh---
Q 014544 155 KYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE--- 230 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~--- 230 (423)
...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+.....
T Consensus 169 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (345)
T cd07877 169 HTDDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 238 (345)
T ss_pred cccccc----------cccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 643221 23467889999999876 4688999999999999999999999976443221111111000
Q ss_pred --------------------hccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 231 --------------------KKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 231 --------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
..............++.+.++|..||..||.+||++.+++. +.+|.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~--h~~f~~ 305 (345)
T cd07877 239 AELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA--HAYFAQ 305 (345)
T ss_pred HHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc--Chhhhh
Confidence 00000111112235778999999999999999999998865 455543
No 345
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.4e-37 Score=292.95 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=206.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
...|++.+.||+|+||.||+|.+..++..|++|++..... ...+..|+++++.+.| +++..+..++......++++||
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKH-PNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCC-CCeeEEEEEEEECCEEEEEEec
Confidence 4678999999999999999999988899999998876543 4568899999999976 5676777777778899999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ +++|.+++......+++..++.++.|++.||.|||+.|++|+||+|+||++ +.++.++|+|||++.........
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~- 172 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTKEKSK- 172 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhccchhh-
Confidence 9 699999998654479999999999999999999999999999999999999 47889999999998765433211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||....... ....+...... +.. ....
T Consensus 173 ------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~---~~~~~~~~~~~-~~~-~~~~ 241 (286)
T cd06614 173 ------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR---ALFLITTKGIP-PLK-NPEK 241 (286)
T ss_pred ------hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhcCCC-CCc-chhh
Confidence 123457889999999998889999999999999999999999998654332 12222222111 111 1123
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
++..+.++|.+||+.+|.+||++.+|++ +.++.+
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~--~~~~~~ 275 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQ--HPFLKK 275 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhh--ChHhhc
Confidence 5889999999999999999999999965 444444
No 346
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=5.4e-37 Score=286.39 Aligned_cols=246 Identities=23% Similarity=0.313 Sum_probs=201.5
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||.|+||.||+|.+..++..|++|++.... ....+..|+++++.++| +++..+..........++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNH-PNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCC-CChhheEEEEecCCEEEEEEE
Confidence 5899999999999999999999889999999877543 33457889999999986 555566555666789999999
Q ss_pred cc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 84 LL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
++ +++|.+++... ...+++..++.++.|++.||.|||++|++|+||+|+||+++ ..+.++|+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCccceeecccC
Confidence 99 67999988764 36799999999999999999999999999999999999994 6789999999999876543
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ......|++.|+|||.+.+..++.++||||||+++|+|++|..||...... +.......... ..
T Consensus 157 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~----~~ 222 (258)
T cd08215 157 VD-------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL---ELALKILKGQY----PP 222 (258)
T ss_pred cc-------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH---HHHHHHhcCCC----CC
Confidence 31 112457889999999999888999999999999999999999999765422 22222222221 12
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+...++..+.+++.+||..+|++||++.++++
T Consensus 223 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22356889999999999999999999999865
No 347
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.5e-37 Score=292.84 Aligned_cols=253 Identities=28% Similarity=0.398 Sum_probs=204.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||+|+..... ....+..|++++..+..+++++.+..++...+..+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999876532 2345788999999998457777776666778889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||++ +++|.+++.. .+.+++..++.++.|++.||.|||+.|++|+||+|+||+++ .++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~-~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRK-YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCccccccCCcc
Confidence 9999 9999999875 44799999999999999999999999999999999999994 78899999999998765433
Q ss_pred CCCc-------------ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH
Q 014544 161 TNRH-------------IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 161 ~~~~-------------~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (423)
.... ..........++..|+|||.+.+..++.++||||||+++|++++|..||..... ...+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~ 233 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLTFQK 233 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHH
Confidence 2110 011233456788999999999988899999999999999999999999986542 233333
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCCh----HHHHH
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY----GFLKR 271 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~----~~l~~ 271 (423)
+.......+ ..+++.+.++|..||+.+|++||++ ++|+.
T Consensus 234 ~~~~~~~~~-----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 ILKLEYSFP-----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHhcCCCCC-----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 333333222 3458899999999999999999999 66643
No 348
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=8.5e-37 Score=288.44 Aligned_cols=248 Identities=19% Similarity=0.270 Sum_probs=184.0
Q ss_pred ceeeecCceeEEEEEEcCC--CceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 13 RKIGSGSFGEIFLASHVDT--NEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~--~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
+.||+|+||.||+|..... ...+++|.+.... ....+.+|+.+++.++| +++..+..++......++||||+ +
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQH-PNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCC-cchhheEEEecCCCccEEEEecCCC
Confidence 3699999999999975433 2346777665433 23468889999998876 55555655666778899999999 7
Q ss_pred CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 87 PSLEDLFVYCR---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 87 ~sL~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
++|.+++.... ..++...++.++.||+.||+|||+++++||||||+|||+ +.++.++|+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~-- 154 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDY-- 154 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchh--
Confidence 89999887532 346777889999999999999999999999999999999 4788999999999864322111
Q ss_pred cccccCCCCcccccCccccchhcC-------CCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhh-ccC
Q 014544 164 HIPYRENKNLTGTARYASCNTHLG-------IEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEK-KVS 234 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~-~~~ 234 (423)
........++..|+|||++.+ ..++.++|||||||++|||++ |..||...... +.+..+... ...
T Consensus 155 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~---~~~~~~~~~~~~~ 228 (268)
T cd05086 155 ---IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR---EVLNHVIKDQQVK 228 (268)
T ss_pred ---hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHhhcccc
Confidence 011224567889999999853 235789999999999999997 67888765433 222222222 222
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
.+.+.....+++.+.+++..|| .+|++||++++|++.|
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 2223333456888999999999 6899999999998876
No 349
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.1e-37 Score=292.18 Aligned_cols=246 Identities=21% Similarity=0.297 Sum_probs=197.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
.|.-.+.||+|++|.||+|.+..+++.|++|.+.... ....+.+|+.+++.+.| +++..+..+....+..++++||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h-~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQH-PNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCC-CChheEEEEEEcCCeEEEEEecc
Confidence 5666789999999999999998889999999875433 23347889999999876 56666666677788899999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+++.. ..+++..+..++.|++.||+|||++||+||||+|+||++ +.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 99 EGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCc---
Confidence 8899998875 568999999999999999999999999999999999999 4788999999998875543221
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccC
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSH 244 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 244 (423)
......|+..|+|||.+.+..++.++|||||||++|+|++|..||...... ..+..+..... +.......+
T Consensus 171 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~---~~~~~~~~~~~--~~~~~~~~~ 241 (285)
T cd06648 171 ----RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL---QAMKRIRDNLP--PKLKNLHKV 241 (285)
T ss_pred ----ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH---HHHHHHHhcCC--CCCcccccC
Confidence 112456889999999999888999999999999999999999999764332 22222222211 111111235
Q ss_pred hHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 245 PAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 245 ~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+..+.++|.+||..+|++||++.++++
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 789999999999999999999998865
No 350
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.6e-38 Score=308.36 Aligned_cols=244 Identities=24% Similarity=0.341 Sum_probs=208.7
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+.|.+.+.||+|.|+.|.+|++..++..||||++.+.... ..+.+|+++|+.|.| ++|..+..+.......|+||
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~H-PnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNH-PNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCC-cceeeeeeeeeecceeEEEE
Confidence 6799999999999999999999999999999988765432 337899999999987 55666766677788999999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ +|.+.+++... +.+.+.++..++.|+++|++|||+++|+|||||++|||+ +.+..+||+|||++..+.....
T Consensus 135 eya~~ge~~~yl~~~-gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~~~~~ 210 (596)
T KOG0586|consen 135 EYASGGELFDYLVKH-GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFDYGLM 210 (596)
T ss_pred EeccCchhHHHHHhc-ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeeccccc
Confidence 999 99999999874 456669999999999999999999999999999999999 5777899999999988874432
Q ss_pred CCcccccCCCCcccccCccccchhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
...++|++.|+|||++.|..| ++.+|+||+|++||-|+.|.+||.+..-. +.-.+.+..++..|...
T Consensus 211 --------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk---~Lr~rvl~gk~rIp~~m- 278 (596)
T KOG0586|consen 211 --------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK---ELRPRVLRGKYRIPFYM- 278 (596)
T ss_pred --------ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc---cccchheeeeeccccee-
Confidence 347899999999999999986 68999999999999999999999975432 33334555666666433
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+.+..++|.++|.++|.+|++.++|..
T Consensus 279 ----s~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 ----SCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred ----echhHHHHHHhhccCccccCCHHHhhh
Confidence 668999999999999999999999866
No 351
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.3e-37 Score=290.18 Aligned_cols=245 Identities=21% Similarity=0.295 Sum_probs=198.0
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.-|++.+.||.|+||.||+|.+..+++.||||+...... ...+.+|+.++..+.| +++..+..++......++|||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCC-CCEeEEEEEEEeCCeEEEEEE
Confidence 357889999999999999999988899999998764332 2357789999999876 556666666778888999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|+ +++|.+++. ...+++..+..++.|++.||.|||++|++|+||+|+||++ +.++.++|+|||++.........
T Consensus 83 ~~~~~~l~~~i~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~~ 157 (277)
T cd06641 83 YLGGGSALDLLE--PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIK 157 (277)
T ss_pred eCCCCcHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccchhh
Confidence 99 778888875 4568999999999999999999999999999999999999 47789999999998766432211
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||...... .....+.... ...+..
T Consensus 158 -------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~----~~~~~~ 223 (277)
T cd06641 158 -------RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM---KVLFLIPKNN----PPTLEG 223 (277)
T ss_pred -------hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH---HHHHHHhcCC----CCCCCc
Confidence 12346788999999999888899999999999999999999999765432 2222221111 112224
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++.++.+++.+||..+|.+||++.+++.
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 56889999999999999999999999987
No 352
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.5e-37 Score=289.89 Aligned_cols=251 Identities=20% Similarity=0.348 Sum_probs=192.7
Q ss_pred eEEeceeeecCceeEEEEEEcC---CCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCC-----
Q 014544 9 YKLGRKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGE----- 76 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~---~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~----- 76 (423)
|++.+.||+|+||.||+|.+.. +++.||||++..... .+++.+|+++++.+.| +++..+..++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDH-PNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCC-CCcceEEEEEccCCCCCcc
Confidence 6788999999999999998653 568899998765432 2347789999999986 45555555443221
Q ss_pred -eeEEEEecc-CCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEee
Q 014544 77 -DNVLVLDLL-GPSLEDLFVYCR-----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 77 -~~~lv~e~~-~~sL~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
..+++++|+ +++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+||++ +.++.+||+|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEECc
Confidence 246888888 788888765321 247899999999999999999999999999999999999 4788999999
Q ss_pred ccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHH
Q 014544 150 FGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 150 FGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (423)
||+++........ .......++..|++||.+.+..++.++|||||||++|+|++ |..||.+.... ..+..+
T Consensus 157 fg~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYY-----RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYL 228 (273)
T ss_pred ccccccccCCcce-----ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHH
Confidence 9999866432211 11123345678999999998889999999999999999999 89999865432 222222
Q ss_pred Hhhc-cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 229 CEKK-VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 229 ~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
.... ...+ ...+..+.+++.+||+.+|++||++.+|++.|+.+
T Consensus 229 ~~~~~~~~~-----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 229 IKGNRLKQP-----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HcCCcCCCC-----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2211 1111 24578999999999999999999999999998865
No 353
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=8.5e-37 Score=287.58 Aligned_cols=249 Identities=24% Similarity=0.335 Sum_probs=194.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCCCCeEEEeeee--CCe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSGIPNIKWYGVD--GED 77 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~--~~~ 77 (423)
.+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+++++.++|.+ +..+..+..+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~-i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDR-IVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCC-cceEEEEEEcCCCCE
Confidence 57999999999999999999999999999999864321 1235778999999998754 5455444433 356
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++|||+ +++|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||++ +.++.++|+|||+++..
T Consensus 81 ~~~v~e~~~~~~L~~~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKA-YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEEeCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcccccccc
Confidence 78999999 7899988865 3458999999999999999999999999999999999999 47789999999999875
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... .....+.. ...
T Consensus 157 ~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~---~~~ 226 (264)
T cd06653 157 QTICMSG----TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM---AAIFKIAT---QPT 226 (264)
T ss_pred ccccccC----ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH---HHHHHHHc---CCC
Confidence 4321110 0112456889999999999988999999999999999999999999865332 22222221 111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+..+..+++.+.++|.+||. +|..||++.+++.
T Consensus 227 ~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 223345668899999999999 5799999997754
No 354
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.1e-37 Score=302.07 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=194.3
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeC-----
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDG----- 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~----- 75 (423)
+.++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+|+.+++.+.|++.+.....+....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 5789999999999999999999999999999999876432 2234678999999997754444333222221
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...++|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++ .++.++|+|||++..
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~~~~ 167 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLARH 167 (343)
T ss_pred ccEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccccccc
Confidence 24899999999999998863 5699999999999999999999999999999999999994 788999999999976
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh---
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK--- 231 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--- 231 (423)
..... ....++..|+|||.+.+. .++.++|||||||++|+|++|+.||.+.........+......
T Consensus 168 ~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 168 TDDEM----------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred ccccc----------cCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 54321 234678899999998753 5789999999999999999999999865433222211111100
Q ss_pred --------------------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 --------------------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 --------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.............++.+.++|.+||..+|++||++.+|+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000111222345789999999999999999999999865
No 355
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=6.8e-37 Score=290.42 Aligned_cols=238 Identities=22% Similarity=0.278 Sum_probs=186.8
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||+|+||+||+|.+..+++.||+|++.... ....+..|+++++.++| +++..+..+....+..|+||||+ +++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSS-RFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCC-CCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 689999999999999999999999875422 22345789999999975 66666666666778899999999 789
Q ss_pred HHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 89 LEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 89 L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
|.+++.... ..+++..++.++.|++.||.|||++|++||||+|+||++ +.++.++|+|||++........
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~------ 150 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKK------ 150 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCc------
Confidence 998886533 369999999999999999999999999999999999999 4788999999999876543211
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
.....++..|+|||.+.+..++.++|||||||++|+|++|+.||...........+. ......+ ......+++.
T Consensus 151 --~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~ 224 (277)
T cd05577 151 --IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK---RRTLEMA-VEYPDKFSPE 224 (277)
T ss_pred --cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH---hcccccc-ccCCccCCHH
Confidence 124467889999999998889999999999999999999999997654321112111 1111111 1122345889
Q ss_pred HHHHHHHHHcCCCCCCCChHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGF 268 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~ 268 (423)
+.++|.+||+.+|++||++.+
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred HHHHHHHHccCChhHccCCCc
Confidence 999999999999999994433
No 356
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.7e-36 Score=282.77 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=201.9
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeC--CeeEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDNVLV 81 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~~lv 81 (423)
+|++.+.||+|++|.||+|.+..+++.|++|+...... ...+.+|+.+++.+.| +++..+....... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQH-PNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCC-CCEeeEEEEEecCCCCeEEEE
Confidence 58899999999999999999998899999998876543 4568899999999986 4555555555555 788999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
+|++ +++|.+++.... .+++..++.++.|++.||.|||+.|++|+||+|+||+++ ..+.++|+|||.+.......
T Consensus 80 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEEeccccc
Confidence 9999 899999987643 899999999999999999999999999999999999994 67899999999998876544
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
.. .......++..|+|||.+.+...+.++||||||+++|+|++|..||..... .......+..... ....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~---~~~~ 225 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKIGSSGE---PPEI 225 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhccccCC---CcCC
Confidence 21 011245788999999999988899999999999999999999999987541 1222222221111 1122
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....+..+.++|.+||..+|++||++.+++.
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 2345889999999999999999999999865
No 357
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.4e-37 Score=292.10 Aligned_cols=253 Identities=21% Similarity=0.313 Sum_probs=199.2
Q ss_pred ceEEeceeeecCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
+|++.+.||+|+||.||+|++. .+++.||||++.... ....+..|+.++..+.++++++.+..........
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4899999999999999999864 457889999876432 2234778999999998778888887777778889
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
++||||+ +++|.+.+.. ...+++..+..++.|++.||.|||+.|++||||||+||++ +.++.++|+|||+++.+.
T Consensus 81 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhh-cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECccccccc
Confidence 9999999 7899888764 4568999999999999999999999999999999999999 477899999999987654
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCC--CCCcchHHHHHHHHHHHHhCCCCCCCchhhhh-HHHHHHHHhhccC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIE--QSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-KQKYDKICEKKVS 234 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 234 (423)
..... ......|+..|+|||.+.+.. .+.++||||||+++|+|++|..||........ ......+......
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd05583 157 AEEEE------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP 230 (288)
T ss_pred ccccc------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC
Confidence 43221 112356889999999988765 78899999999999999999999964322111 1112222222221
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
. ...++..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 231 ~-----~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 231 F-----PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred C-----CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 1 23457899999999999999999999888776653
No 358
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.9e-36 Score=289.22 Aligned_cols=243 Identities=20% Similarity=0.330 Sum_probs=192.5
Q ss_pred ceEEeceeeecCceeEEEEEEc---CCCceEEEEEecCCC------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 8 KYKLGRKIGSGSFGEIFLASHV---DTNEIVAVKIENSGT------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
.|++.+.||.|+||.||+|++. .+++.||+|++.... ....+..|++++..+.+++++..+..++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4899999999999999999875 478899999876432 2245778999999998888888888777788889
Q ss_pred EEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 79 VLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 79 ~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
++||||+ +++|.+++.. ...+++..+..++.||+.||.|||+.|++||||+|+|||+ +.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~-~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceecc
Confidence 9999999 7899998875 4568999999999999999999999999999999999999 478899999999998754
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhh-HHHHHHHHhhccC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATK-KQKYDKICEKKVS 234 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 234 (423)
..... ......|+..|+|||.+.+. .++.++||||||+++|+|++|..||........ ......+......
T Consensus 157 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (290)
T cd05613 157 EDEVE------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP 230 (290)
T ss_pred ccccc------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCC
Confidence 33211 11245688999999998753 367899999999999999999999974322111 1112222221111
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCC
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 265 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 265 (423)
. ...+++.+.+++.+||..+|++||+
T Consensus 231 ~-----~~~~~~~~~~ll~~~l~~~p~~R~~ 256 (290)
T cd05613 231 Y-----PQEMSALAKDIIQRLLMKDPKKRLG 256 (290)
T ss_pred C-----CccCCHHHHHHHHHHhcCCHHHhcC
Confidence 1 2345789999999999999999983
No 359
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-38 Score=305.25 Aligned_cols=242 Identities=21% Similarity=0.325 Sum_probs=205.8
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccCCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLGPS 88 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~~s 88 (423)
+.||+|.||+||-|+++++|+.||||++.+- ....++..|+.||+.+.| +.|..+...++..+..++|||-+.|+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~H-PGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHH-PGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCC-CCeeEEEEeecCCceEEEEehhhcch
Confidence 6899999999999999999999999987653 234568999999999976 78889999999999999999999888
Q ss_pred HHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 89 LEDLFV-YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 89 L~~~l~-~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
..+.+. ...+++++.....++.||+.||.|||-++|+|+||||+|||+...+...++||||||+|+.+.+..-
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF------ 722 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF------ 722 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhh------
Confidence 777765 4467899999999999999999999999999999999999998766778999999999999876553
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
....+||+.|+|||++.+..|++.-|+||.|||+|--+.|..||....+ .. +.|....+-.|. .-++.++++
T Consensus 723 --RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd--In---dQIQNAaFMyPp-~PW~eis~~ 794 (888)
T KOG4236|consen 723 --RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED--IN---DQIQNAAFMYPP-NPWSEISPE 794 (888)
T ss_pred --hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc--hh---HHhhccccccCC-CchhhcCHH
Confidence 2478999999999999999999999999999999999999999975332 22 233333333332 234677899
Q ss_pred HHHHHHHHHcCCCCCCCChHHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGFL 269 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l 269 (423)
..+||..+|+..-.+|-+.+.-
T Consensus 795 AidlIn~LLqVkm~kRysvdk~ 816 (888)
T KOG4236|consen 795 AIDLINNLLQVKMRKRYSVDKS 816 (888)
T ss_pred HHHHHHHHHHHHHHHhcchHhh
Confidence 9999999999999999887654
No 360
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.4e-36 Score=288.21 Aligned_cols=252 Identities=21% Similarity=0.238 Sum_probs=198.7
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
|++.+.||+|+||.||+|+...+++.||+|++.... ....+..|+.+++.+.| +++..+..+.......++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~-~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKH-PNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCC-CCHHHHHhhhhcCCceEEEecC
Confidence 678899999999999999999999999999877542 23457789999999985 5566666666677899999999
Q ss_pred cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 85 LGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 85 ~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
++++|.+++......+++..++.++.|++.||.|||++||+||||+|+||++ ++++.++|+|||+++.......
T Consensus 80 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~--- 153 (282)
T cd07829 80 CDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLR--- 153 (282)
T ss_pred cCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCcc---
Confidence 9889999998754679999999999999999999999999999999999999 4788999999999987643321
Q ss_pred ccccCCCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh------------
Q 014544 165 IPYRENKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK------------ 231 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~------------ 231 (423)
......++..|+|||.+.+. .++.++|||||||++|||++|..||...........+......
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 154 ----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred ----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccc
Confidence 11234567889999999876 7899999999999999999999999875433222221111100
Q ss_pred ---------ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 ---------KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.............+..+.++|..||..+|++||++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0001111222345788999999999999999999998865
No 361
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.2e-36 Score=295.99 Aligned_cols=253 Identities=17% Similarity=0.193 Sum_probs=188.3
Q ss_pred eceeeec--CceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 12 GRKIGSG--SFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 12 ~~~Lg~G--~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
...||.| +||+||+|++..+++.||||+...... .+.+.+|+.+++.++| +++..+..++..+...+++|||+
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h-~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRH-PNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCC-CCcceEeeeEecCCceEEEEecc
Confidence 3456666 999999999999999999999775432 2346788888887876 66777777777888899999999
Q ss_pred -CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 86 -GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 86 -~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||+. .++.++++||+.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHhhhhccCccc
Confidence 78999988753 24589999999999999999999999999999999999994 77899999998765433222111
Q ss_pred cccccCCCCcccccCccccchhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc-----
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP----- 236 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~----- 236 (423)
...+.......++..|+|||++.+. .++.++|||||||++|+|++|+.||....... .+..........+
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ---MLLQKLKGPPYSPLDITT 235 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH---HHHHHhcCCCCCCccccc
Confidence 1111122233456789999999864 47899999999999999999999998653221 1111111000000
Q ss_pred -------------------------------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 -------------------------------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 -------------------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.......+++.+.+||.+||..||++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 00011234678999999999999999999999975
No 362
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.8e-36 Score=281.29 Aligned_cols=245 Identities=24% Similarity=0.361 Sum_probs=200.6
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||+|++|.||+|.+..+++.|++|.+..... ...+.+|++++..+.| +++..+..+.......+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKH-PNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCC-CCccEEEEEEEeCCEEEEEEe
Confidence 58999999999999999999998899999998776542 3457899999999976 456666666677788999999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
++ +++|.+++... ..+++..++.++.|++.||.|||++||+||||+|+||+++ .++.++|+|||++.........
T Consensus 80 ~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 80 YAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred cCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccceecCCCccc
Confidence 99 77999888753 6799999999999999999999999999999999999994 6789999999999876543321
Q ss_pred CcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhc
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCK 242 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (423)
.....++..|+|||.+.+..++.++||||||+++|+|++|..||...... ........... .....
T Consensus 156 -------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~----~~~~~ 221 (254)
T cd06627 156 -------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM---AALFRIVQDDH----PPLPE 221 (254)
T ss_pred -------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH---HHHHHHhccCC----CCCCC
Confidence 12456889999999998888899999999999999999999999865432 22222221111 11224
Q ss_pred cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 243 SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 243 ~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++..+.+++.+||..+|++||++.+++.
T Consensus 222 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 222 GISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 56889999999999999999999998864
No 363
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.4e-38 Score=284.51 Aligned_cols=266 Identities=22% Similarity=0.295 Sum_probs=203.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCc----eEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCee
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNE----IVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDN 78 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~----~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~ 78 (423)
..|++.+.||+|.||.||+|...+++. .+|||.++... ......+|+.+++.|+|++.+..+..+-......
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 468999999999999999997665433 68999877653 3445789999999999977776665555557889
Q ss_pred EEEEeccCCCHHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEec-cCCCCeEEEeeccce
Q 014544 79 VLVLDLLGPSLEDLFVYCR----RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL-GRKANQVYIIDFGLA 153 (423)
Q Consensus 79 ~lv~e~~~~sL~~~l~~~~----~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~-~~~~~~vkL~DFGla 153 (423)
++++||...+|..++...+ +.++...+..|+.||+.|+.|||++-|+||||||.|||+.. +...|.|||+|||+|
T Consensus 104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGla 183 (438)
T KOG0666|consen 104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLA 183 (438)
T ss_pred EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHH
Confidence 9999999999999997543 45899999999999999999999999999999999999952 123589999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhh------hHHHHH
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAAT------KKQKYD 226 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~------~~~~~~ 226 (423)
+.+.++.. |.......+-|..|.|||.+.|.. |+.+.||||.|||+.||+|-++.|.+..... ....+.
T Consensus 184 R~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 184 RLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred HHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99876643 223344678899999999999876 8999999999999999999988887633211 111222
Q ss_pred HHHhhccCCchHH---------------------------------hhccChHHHHHHHHHHHcCCCCCCCChHHHHHHH
Q 014544 227 KICEKKVSTPIEV---------------------------------LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLF 273 (423)
Q Consensus 227 ~i~~~~~~~~~~~---------------------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L 273 (423)
+|.+-. ..|... ..+.-++...+|+.++|.+||-+|.|+++.++
T Consensus 260 rIf~vL-G~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle-- 336 (438)
T KOG0666|consen 260 RIFEVL-GTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE-- 336 (438)
T ss_pred HHHHHc-CCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc--
Confidence 332211 111000 01122455789999999999999999988755
Q ss_pred HHHHHh
Q 014544 274 HDLFSR 279 (423)
Q Consensus 274 ~~~~~~ 279 (423)
+..|.+
T Consensus 337 h~yF~~ 342 (438)
T KOG0666|consen 337 HPYFTE 342 (438)
T ss_pred cccccc
Confidence 344443
No 364
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.9e-36 Score=290.01 Aligned_cols=251 Identities=20% Similarity=0.316 Sum_probs=198.1
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCCC--CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CC
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT--KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GP 87 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~--~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~ 87 (423)
....||+|+||.||++....+++.||||.+.... ....+.+|+.+++.+.| ++++.+..++...+..+++|||+ ++
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQH-ENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCC-cchhheeeEEEeCCEEEEEEecCCCC
Confidence 3467999999999999999999999999875433 23457889999999886 56666766777888999999999 77
Q ss_pred CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccc
Q 014544 88 SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPY 167 (423)
Q Consensus 88 sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~ 167 (423)
+|.+++. ...+++..+..++.|++.||+|||++|++|+||+|+||++ +.++.++|+|||++........
T Consensus 103 ~L~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~------ 171 (292)
T cd06657 103 ALTDIVT--HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVP------ 171 (292)
T ss_pred cHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceecccccc------
Confidence 8888764 4568999999999999999999999999999999999999 4778999999999876543221
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
......++..|+|||.+.+..++.++||||||+++|+|++|..||.+......... + ......... ....++..
T Consensus 172 -~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~---~-~~~~~~~~~-~~~~~~~~ 245 (292)
T cd06657 172 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---I-RDNLPPKLK-NLHKVSPS 245 (292)
T ss_pred -cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---H-HhhCCcccC-CcccCCHH
Confidence 11245688999999999888899999999999999999999999986443322221 1 111111111 11345788
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcC
Q 014544 248 FASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
+.+++.+||..+|.+||++.+|+. ++++.+.+
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~--~~~~~~~~ 277 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK--HPFLAKAG 277 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc--ChHHhccC
Confidence 999999999999999999999876 56655544
No 365
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.1e-36 Score=282.66 Aligned_cols=244 Identities=20% Similarity=0.297 Sum_probs=199.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+|++.+.||.|+||.||+|.+..+++.+|+|.+.... ....+.+|+++++.++| ++++.+..++.+....++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~-~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNH-PNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCC-CCchhhhhhhccCCEEEEEeh
Confidence 5899999999999999999999999999999876432 23356789999999985 567667666667789999999
Q ss_pred cc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 84 LL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|+ +++|.+++... ...+++..++.++.|++.||.|||+.|++|+||+|+||+++ ..+.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhccC
Confidence 99 88999887642 35689999999999999999999999999999999999995 6788999999999776543
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
.. ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||...+.. .....+.......
T Consensus 157 ~~---------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~---- 220 (256)
T cd08530 157 MA---------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ---DLRYKVQRGKYPP---- 220 (256)
T ss_pred Cc---------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCCCC----
Confidence 11 1345788999999999988999999999999999999999999875432 2222222222221
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
....++.++.+++.+||..+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 12245889999999999999999999998865
No 366
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=309.49 Aligned_cols=269 Identities=21% Similarity=0.296 Sum_probs=204.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecC---CCCchhHHHHHHHHHHHcCCCCCCeEEEeeee------CC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS---GTKHPQLLYEAKVYKILQGGSGIPNIKWYGVD------GE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~---~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~------~~ 76 (423)
..-|..-+.||+|+||.||+++++.+|+.||||.++. ....+...+|++++++|+| ++|+.+.....+ ..
T Consensus 12 ~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh-~NIVk~f~iee~~~~~~~~~ 90 (732)
T KOG4250|consen 12 NYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH-PNIVKLFDIEETKFLGLVTR 90 (732)
T ss_pred CcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc-hhhhhhcccCCccccCcccc
Confidence 3456778999999999999999999999999998876 3445567899999999995 555444333222 34
Q ss_pred eeEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC-CCCeEEEeeccc
Q 014544 77 DNVLVLDLL-GPSLEDLFVYC--RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR-KANQVYIIDFGL 152 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~-~~~~vkL~DFGl 152 (423)
..++||||| +|+|...+... ...+++.+++.++.+++.||.|||++||+||||||.||++-.+. .....||+|||.
T Consensus 91 ~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 91 LPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred cceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 568999999 99999999743 24599999999999999999999999999999999999985433 334679999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcC-CCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-hhHHHHHHHHh
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLG-IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-TKKQKYDKICE 230 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~ 230 (423)
|+.+.+... ..++.||..|.+||++.. ..|+..+|.|||||++|+++||.+||...... ...+....+..
T Consensus 171 Arel~d~s~--------~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~t 242 (732)
T KOG4250|consen 171 ARELDDNSL--------FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIIT 242 (732)
T ss_pred cccCCCCCe--------eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhc
Confidence 999887663 237899999999999994 78999999999999999999999999643222 11112212211
Q ss_pred hccC-----------Cc---------hHHhhccChHHHHHHHHHHHcCCCCCCC--ChHHHHHHHHHHHHhcCCC
Q 014544 231 KKVS-----------TP---------IEVLCKSHPAEFASYFHYCQSLTFDQRP--DYGFLKRLFHDLFSREGYD 283 (423)
Q Consensus 231 ~~~~-----------~~---------~~~~~~~~~~~l~~li~~cl~~dP~~RP--t~~~l~~~L~~~~~~~~~~ 283 (423)
++.. .| ...++..+-..+-..+..+|..+|.+|- .+.+....+.+++...-..
T Consensus 243 kkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~~vvh 317 (732)
T KOG4250|consen 243 KKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNLKVVH 317 (732)
T ss_pred cCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhhheeE
Confidence 1110 00 0112222234566778888999999999 8888888888888765543
No 367
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=300.63 Aligned_cols=262 Identities=18% Similarity=0.268 Sum_probs=210.5
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
-.....+.++||+|-||+|.+|.- .....||||+++.+.. ...|.+|+++|.+|+| ++|..+...+..++.++++
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkh-PNIveLvGVC~~DePicmI 613 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKH-PNIVELLGVCVQDDPLCMI 613 (807)
T ss_pred chhheehhhhhcCcccceeEEEEe-cCceEEEEeecCcccchhHHHHHHHHHHHHhccCC-CCeeEEEeeeecCCchHHH
Confidence 345678899999999999999985 3368899999886643 3459999999999976 5566666667778899999
Q ss_pred Eecc-CCCHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 82 LDLL-GPSLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~-l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+||+ .|+|..++...... +..+....|+.||+.|++||.+.++|||||.+.|+|+ +.++++||+|||+++.+...
T Consensus 614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCcccccccccC
Confidence 9999 99999999865433 3556677899999999999999999999999999999 58999999999999977655
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh--CCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR--GSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt--G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.. |+.....+-..+|||+|.+.-.+++.++|||+||+++||+++ ...||..+++....+.........-....
T Consensus 691 ~y-----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 691 DY-----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred Cc-----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCccee
Confidence 44 233445667899999999999999999999999999999876 88999887665444333333332222222
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
...+.-+|..+.++|..||..+-.+||+|++|...|.+.
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 223344589999999999999999999999998877653
No 368
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=299.59 Aligned_cols=265 Identities=22% Similarity=0.291 Sum_probs=212.3
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---------CchhHHHHHHHHHHHcCCCCCCeEEEeee
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---------KHPQLLYEAKVYKILQGGSGIPNIKWYGV 73 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~ 73 (423)
..+..+|-++..||+|||++||+|.+...++.||||+-.... ..+...+|.+|.+.|.|+.++..+.++..
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 457789999999999999999999999999999999844322 23346789999999999777766677778
Q ss_pred eCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--CccccccCCCceEEeccCCCCeEEEeecc
Q 014544 74 DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR--GFLHRDIKPDNFLMGLGRKANQVYIIDFG 151 (423)
Q Consensus 74 ~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~--giiHrDLKp~NILl~~~~~~~~vkL~DFG 151 (423)
+.+.+|-|+|||.|+-.|++.+..+.++++++..|+.||+.||.||... .|||-||||.|||+..+...|.+||+|||
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 9999999999996665566665677899999999999999999999976 59999999999999877788999999999
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhcCC----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHH
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~ 227 (423)
+++.+.+................||..|++||.+.-. ..+.++||||+|||+|.++.|+.||...........+..
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNT 698 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENT 698 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhc
Confidence 9999988776655555556678999999999998633 268899999999999999999999986433222222222
Q ss_pred HHhh-ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHH
Q 014544 228 ICEK-KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 270 (423)
Q Consensus 228 i~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 270 (423)
|+.. ...+|.. +-++.+.++||++||++.-++|.+..+|.
T Consensus 699 IlkAtEVqFP~K---PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 699 ILKATEVQFPPK---PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhcceeccCCCC---CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 2222 2222322 23478999999999999999998876663
No 369
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=334.46 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=202.5
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.-+|+-+..||.|.||.||.|.+.++|+..|+|-++... ..+.+.+|..++..+.| ++++.++......+..+|.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnH-pNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNH-PNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccC-ccccccCceeecHHHHHHH
Confidence 456778889999999999999999999999999655432 33457889999999987 5566666667788889999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||| +|+|.+++.. .+..++.....+..|++.||.|||++|||||||||+||++ +..|.+|++|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~-gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEH-GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHh-cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecCch
Confidence 9999 9999998874 5557777788899999999999999999999999999999 578899999999999887653
Q ss_pred CCCcccccCCCCcccccCccccchhcCCC---CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh-ccCCc
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIE---QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK-KVSTP 236 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~-~~~~~ 236 (423)
.. .+ ..-....||+.|||||++.|.. ...++||||||||..||+||+.||..++.. .+.+..+..+ +...|
T Consensus 1389 ~~--~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne--~aIMy~V~~gh~Pq~P 1463 (1509)
T KOG4645|consen 1389 QT--MP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE--WAIMYHVAAGHKPQIP 1463 (1509)
T ss_pred hc--CC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch--hHHHhHHhccCCCCCc
Confidence 21 11 2334678999999999998654 578999999999999999999999876542 2333333222 33333
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+++.+-++||.+||..||..|.++.+|++
T Consensus 1464 -----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1464 -----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred -----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 335889999999999999999988876654
No 370
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.4e-36 Score=284.97 Aligned_cols=249 Identities=24% Similarity=0.378 Sum_probs=194.5
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||.|+||.||+|++..+++.|++|++.... ....+.+|++++..+.| +++..+..........+++|||+ +++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQS-PYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCC-cchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999889999999876543 23457888999999986 55555655666778899999999 789
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC-cccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR-HIPY 167 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~-~~~~ 167 (423)
|.+++... +.+++..++.++.||+.||.|||++|++|+||+|+||++ +.++.++|+|||++.......... ....
T Consensus 80 L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 80 LASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCccccccccc
Confidence 99988753 479999999999999999999999999999999999999 478899999999987654321100 0000
Q ss_pred cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHH
Q 014544 168 RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAE 247 (423)
Q Consensus 168 ~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 247 (423)
.......++..|+|||.+.+..++.++||||||+++|+|++|..||...... +.+..+.......+.. ..++..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~ 229 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE---EIFQNILNGKIEWPED---VEVSDE 229 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHhcCCcCCCcc---ccCCHH
Confidence 1122456788999999999888999999999999999999999999765432 3333333333332221 124889
Q ss_pred HHHHHHHHHcCCCCCCCChHHHHHHHH
Q 014544 248 FASYFHYCQSLTFDQRPDYGFLKRLFH 274 (423)
Q Consensus 248 l~~li~~cl~~dP~~RPt~~~l~~~L~ 274 (423)
+.+++.+||+.+|++||++..+.++|+
T Consensus 230 ~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 230 AIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred HHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 999999999999999999966655544
No 371
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9.4e-37 Score=286.37 Aligned_cols=245 Identities=21% Similarity=0.266 Sum_probs=192.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
+|.+.+.||+|+||.||+|.+...+..+++|+.+... ....+..|+.+++.++| +++..+..+..+....++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDH-PAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCC-CcHHHHHHHHhcCCceEE
Confidence 6999999999999999999998777777777654311 22246678888998876 455555555566778999
Q ss_pred EEecc-CCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 81 VLDLL-GPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
+|||+ +++|.+++.. ....+++..++.++.|++.||.|||++|++|+||||+||+++ .+.++|+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence 99999 7899888764 235699999999999999999999999999999999999994 467999999999876
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
..... ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||..... ......+......
T Consensus 156 ~~~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~-- 223 (260)
T cd08222 156 MGSCD-------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF---LSVVLRIVEGPTP-- 223 (260)
T ss_pred CCCcc-------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHHHHHcCCCC--
Confidence 44322 12245678899999999888899999999999999999999999975332 2222222222111
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++.++.++|.+||..+|++||++.++++
T Consensus 224 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 --SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 122455889999999999999999999999865
No 372
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=306.26 Aligned_cols=265 Identities=21% Similarity=0.299 Sum_probs=214.3
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
.+++++..||-|+||.|-++........+|+|++++.. ..+.+..|-++|..... +.|+.++-.+.+..+.|+.
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s-~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRS-DFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCc-hHHHHHHHHhccchhhhhh
Confidence 45678889999999999999886655568999877543 23347788899988874 6676666666788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
||-| ||.|...+.. ++.|+..++..++..+++|++|||++|||+|||||+|+|+ +..|-+||.|||+|+.+....
T Consensus 499 mEaClGGElWTiLrd-Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRD-RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HHhhcCchhhhhhhh-cCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCC
Confidence 9999 9999999986 6679999999999999999999999999999999999999 689999999999999987654
Q ss_pred CCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHh
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVL 240 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 240 (423)
. ..+++||+.|.|||++.+...+.++|.||||+++|||++|.+||.+.+.. ..|..|+.+.-.. .+
T Consensus 575 K--------TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm---ktYn~ILkGid~i---~~ 640 (732)
T KOG0614|consen 575 K--------TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM---KTYNLILKGIDKI---EF 640 (732)
T ss_pred c--------eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH---HHHHHHHhhhhhh---hc
Confidence 3 34889999999999999999999999999999999999999999987665 4444444432211 12
Q ss_pred hccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceeccc
Q 014544 241 CKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY 295 (423)
Q Consensus 241 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~~~ 295 (423)
++.++....+||+++...+|.+|..+. ..-+.++ ..+.|...|||+.++.
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~--~~gI~DI---kkH~Wf~gfdweglr~ 690 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQ--KGGINDI---KKHRWFEGFDWEGLRS 690 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccc--cCChHHH---HhhhhhhcCChhhhhh
Confidence 255688899999999999999997631 1112222 3356777899988753
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1e-35 Score=314.42 Aligned_cols=143 Identities=23% Similarity=0.465 Sum_probs=125.2
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
++|++.+.||+|+||.||+|.+..+++.||||++..... ...+..|+.++..++| +++..+..++......|||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~h-p~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKS-PFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCC-CCcCeEEEEEEECCEEEEE
Confidence 689999999999999999999998999999999875432 2457788889988876 5566666777788899999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
|||+ +++|.+++.. .+.+++..++.|+.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~-~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI-YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCc
Confidence 9999 8999998865 4568999999999999999999999999999999999999 477899999999986
No 374
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-37 Score=303.49 Aligned_cols=242 Identities=21% Similarity=0.263 Sum_probs=202.0
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
+...|++...+|.|+|+.|-.+.+..+++..++|++... ..+..+|+.++....+++++..+.....+....|+|||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~ 397 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMEL 397 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeehh
Confidence 356899999999999999999999999999999998776 334567888888888889998888888899999999999
Q ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 85 L-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 85 ~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+ |+-+.+.+.. .+.+. .++..|+.+|+.|+.|||++|||||||||+|||+. ++.+.++|+|||.++.......
T Consensus 398 l~g~ell~ri~~-~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~~~-- 471 (612)
T KOG0603|consen 398 LDGGELLRRIRS-KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERSCD-- 471 (612)
T ss_pred ccccHHHHHHHh-cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchhhc--
Confidence 9 6666666553 22233 78888999999999999999999999999999994 3788999999999988765521
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
..+-|..|.|||++...+|+.++||||||++||+|++|..||...... .+.+.++....+. ..
T Consensus 472 --------tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~i~~~~~s-------~~ 534 (612)
T KOG0603|consen 472 --------TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTRIQMPKFS-------EC 534 (612)
T ss_pred --------ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHhhcCCccc-------cc
Confidence 336689999999999999999999999999999999999999864433 2333333332222 45
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+++..++||.+||+.||.+||+++++..
T Consensus 535 vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 535 VSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred cCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 6899999999999999999999999855
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=305.86 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=210.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeee-----eCCeeE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGV-----DGEDNV 79 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~~~~~ 79 (423)
...|+|.+.||.|.+|.||+++.+++++.+|+||...... .+++..|.++++.+.+|++++.+++++. .++.+|
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLW 97 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLW 97 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEE
Confidence 4679999999999999999999999999999999886654 4568889999999999999999877765 357789
Q ss_pred EEEecc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 80 LVLDLL-GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 80 lv~e~~-~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|||||| +|+.-|+.+.. ..++.++.+..|++.++.||.+||...+||||||-.|||++ ..+.|||+|||.+..+.
T Consensus 98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLD 174 (953)
T ss_pred EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---ccCcEEEeeeeeeeeee
Confidence 999999 89999998743 56799999999999999999999999999999999999996 89999999999998876
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
..... ...++||+.|||||++... .|+.++|+||||++..||.-|.+|+.++.+.. .+..| .+
T Consensus 175 sT~gr-------RnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~I--pR 242 (953)
T KOG0587|consen 175 STVGR-------RNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLI--PR 242 (953)
T ss_pred ccccc-------ccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccC--CC
Confidence 65432 3377999999999999754 36789999999999999999999999876542 22111 11
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
-++|.-.-++.++.+|.++|..||.+|.++||+..++++
T Consensus 243 NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 243 NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 122222224566899999999999999999999988754
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=256.61 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=205.6
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
.+|.-.++||+|.||+||+|+.+.+++.||+|..+.+... ...++|+-+++.|.|. +|..++..-......-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhk-nivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK-NIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhc-ceeehhhhhccCceeEEeH
Confidence 3677889999999999999999999999999987755433 3579999999999984 4555555555677889999
Q ss_pred eccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 83 DLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 83 e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|||..+|..++..+++.++.+.+..++.|++.||.|+|+++++||||||.|.|| +.++.+||+|||+|+.+.-+.
T Consensus 81 e~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv-- 155 (292)
T KOG0662|consen 81 EFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV-- 155 (292)
T ss_pred HHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce--
Confidence 999999999999999999999999999999999999999999999999999999 589999999999998775432
Q ss_pred CcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCc----
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTP---- 236 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~---- 236 (423)
+.....+-|..|.+|.++.|.. |+...|+||.|||+.|+.. |.+.|.+.+..+....+.+.........
T Consensus 156 -----rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 156 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred -----EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 3334567799999999999877 8999999999999999997 8888988665554444444333211111
Q ss_pred -----------------hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 -----------------IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 -----------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+.+.+...=+++++++|.-+|.+|.++++.++
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 01112223345689999999999999999987654
No 377
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=281.60 Aligned_cols=251 Identities=20% Similarity=0.295 Sum_probs=201.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
..+-+..||.|+||+|++..++.+|+..|||.++.... ..+++.|.+...+-..+++|+.++.....+...||.||+
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMEL 144 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMEL 144 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHH
Confidence 34456789999999999999999999999998776543 445888888877777777776666666678889999999
Q ss_pred cCCCHHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 85 LGPSLEDLFVY----CRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 85 ~~~sL~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
+..+|..++.. ....+++..+-.|.--.+.||.||-.. .||||||||+|||+ +..|.|||||||.+-.+.++
T Consensus 145 Md~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGqLv~S 221 (361)
T KOG1006|consen 145 MDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQLVDS 221 (361)
T ss_pred HhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHhHHHH
Confidence 99999888763 245689998999999999999999864 89999999999999 68999999999999776554
Q ss_pred CCCCcccccCCCCcccccCccccchhcC--CCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc-
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG--IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP- 236 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~- 236 (423)
-.. ..-.|...|||||.+.. ..|+.+|||||||++|||+.||+.||.+.+. ..+++..+..+..+..
T Consensus 222 iAk--------T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~ 291 (361)
T KOG1006|consen 222 IAK--------TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILL 291 (361)
T ss_pred HHh--------hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeec
Confidence 322 24478899999999973 3489999999999999999999999998654 3344444443332221
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.+..+-.++..+..+|..||.+|-..||.+.+|++
T Consensus 292 ~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 292 FDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 12233456889999999999999999999999876
No 378
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-36 Score=285.44 Aligned_cols=266 Identities=26% Similarity=0.314 Sum_probs=211.5
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHH--HcCCCCCCeEEEeee----e
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKI--LQGGSGIPNIKWYGV----D 74 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~--l~~~~~i~~i~~~~~----~ 74 (423)
++|.++++..+.+.||+|.||+||+|.| .|+.||||++... ++....+|.++++. |+|.+++-.| .... .
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr-dE~SWfrEtEIYqTvmLRHENILgFI-aaD~~~~gs 280 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR-DERSWFRETEIYQTVMLRHENILGFI-AADNKDNGS 280 (513)
T ss_pred hHHhhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc-chhhhhhHHHHHHHHHhccchhhhhh-hccccCCCc
Confidence 4678899999999999999999999999 5778999999764 45678889888876 4554433333 2221 1
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccccCCCceEEeccCCCCeE
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR--------GFLHRDIKPDNFLMGLGRKANQV 145 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~--------giiHrDLKp~NILl~~~~~~~~v 145 (423)
-...+||++|. .|+|.|++.. ..++.+..++++..+|.||+|||-. .|.|||||..|||+ ..++.+
T Consensus 281 ~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C 355 (513)
T KOG2052|consen 281 WTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTC 355 (513)
T ss_pred eEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcE
Confidence 23579999999 9999999984 6799999999999999999999953 49999999999999 589999
Q ss_pred EEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCC------CCCcchHHHHHHHHHHHHhC----------
Q 014544 146 YIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE------QSRRDDLESLGYVLLYFLRG---------- 209 (423)
Q Consensus 146 kL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~s~~sDVwSlGvil~elltG---------- 209 (423)
.|+|+|+|...........++ +...+||.+|||||++...- .-..+||||||.|+||++..
T Consensus 356 ~IADLGLAv~h~~~t~~idi~---~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 356 CIADLGLAVRHDSDTDTIDIP---PNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred EEeeceeeEEecccCCcccCC---CCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 999999999887765444443 33678999999999997432 12478999999999999863
Q ss_pred CCCCCCchhh--hhHHHHHHHHhhccCCchHHhhccCh--HHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 210 SLPWQGLKAA--TKKQKYDKICEKKVSTPIEVLCKSHP--AEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 210 ~~Pf~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
++||.+.-+. ...+...-++..++.++++..+...| ..+.++|+.||..||.-|-++--|.+.|.++.+
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 6888775433 23444445667777777777666555 468899999999999999999999999988763
No 379
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=9.3e-36 Score=287.62 Aligned_cols=259 Identities=19% Similarity=0.251 Sum_probs=187.7
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
.+++.+|. +|.||+++...+++.||||++.... ....+..|+++++.++|+ ++..+..++...+..+++|||+
T Consensus 5 ~i~~~~~~--~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~-~i~~~~~~~~~~~~~~~~~e~~ 81 (314)
T cd08216 5 LIGKCFED--LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHP-NILPYVTSFIVDSELYVVSPLM 81 (314)
T ss_pred hhhHhhcC--CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCc-chhhhhheeecCCeEEEEEecc
Confidence 34444444 4556666666689999999876542 234588999999999874 5555555666778899999999
Q ss_pred -CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 86 -GPSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 86 -~~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
+++|.+++... ...+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||.+..........
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~~~~~~~~~~ 158 (314)
T cd08216 82 AYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSVSMIKHGKRQ 158 (314)
T ss_pred CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccceeeccccccc
Confidence 78899988753 34689999999999999999999999999999999999994 67899999999987664332211
Q ss_pred cccccCCCCcccccCccccchhcCC--CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc---------
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGI--EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--------- 232 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~--~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--------- 232 (423)
...........++..|+|||.+.+. .++.++|||||||++|+|++|+.||....... .....+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~ 236 (314)
T cd08216 159 RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTY 236 (314)
T ss_pred cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCch
Confidence 1111122345678899999999763 48899999999999999999999998643321 1111111000
Q ss_pred ------cC-------C------chHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 233 ------VS-------T------PIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 233 ------~~-------~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
.. . ........++.++.+++..||..||++||+++++++ ..++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~--~p~~~ 299 (314)
T cd08216 237 PLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN--HSFFK 299 (314)
T ss_pred hhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc--CchHh
Confidence 00 0 000011223567899999999999999999999977 44443
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-38 Score=277.00 Aligned_cols=261 Identities=23% Similarity=0.255 Sum_probs=204.3
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeee-------
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGV------- 73 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~------- 73 (423)
..+.|+-..+||+|.||+||+|+.+.+++.||+|+.-.+ .-....++|+++|..|.|.+.+..+..+..
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 457788899999999999999999999999999843221 122347899999999998766555533321
Q ss_pred eCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 74 DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 74 ~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
+...+|+|+.+|..+|..++.....+++..++..++.+++.||.|+|...|+|||+||+|+|| +.++.+||+|||++
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFGla 171 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFGLA 171 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccccc
Confidence 334589999999999999998766789999999999999999999999999999999999999 48899999999999
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK 232 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~ 232 (423)
+.+.......... ....+-|..|.+||.+.|.. |+++.|||..|||+.||+||.+.|++.+.......+..++...
T Consensus 172 r~fs~~~n~~kpr---ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 172 RAFSTSKNVVKPR---YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred cceecccccCCCC---cccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 8876554333221 23556799999999998765 8999999999999999999999999876655445554444332
Q ss_pred cCCchHH--------------hh-----------c--cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 VSTPIEV--------------LC-----------K--SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 ~~~~~~~--------------~~-----------~--~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+. +. + .-.++..+|+..+|..||.+|+++++.+.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 1111000 00 0 01346789999999999999999998865
No 381
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.6e-36 Score=314.53 Aligned_cols=257 Identities=21% Similarity=0.253 Sum_probs=192.3
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeee---------
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGV--------- 73 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~--------- 73 (423)
..+|+.++.||+||||.||+|+.+-+|+.||||.+.... ....+.+|++++.+|+|++.+..+..+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 357889999999999999999999999999999776543 23348899999999998654311100000
Q ss_pred --------------------------------------------------------------------eC----------
Q 014544 74 --------------------------------------------------------------------DG---------- 75 (423)
Q Consensus 74 --------------------------------------------------------------------~~---------- 75 (423)
++
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 00
Q ss_pred -------------------------------CeeEEEEeccCCCHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHhCC
Q 014544 76 -------------------------------EDNVLVLDLLGPSLEDLFVYCRRKF-SLKTVLMLADQMIARIEYVHSRG 123 (423)
Q Consensus 76 -------------------------------~~~~lv~e~~~~sL~~~l~~~~~~l-~~~~~~~i~~qi~~aL~~LHs~g 123 (423)
...||-||||..++...+...+... ....++++++||++||.|+|++|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g 717 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG 717 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 1247889999777666665534333 47889999999999999999999
Q ss_pred ccccccCCCceEEeccCCCCeEEEeeccceeecc----C------CCCCCc-ccccCCCCcccccCccccchhcCCC---
Q 014544 124 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR----D------PTTNRH-IPYRENKNLTGTARYASCNTHLGIE--- 189 (423)
Q Consensus 124 iiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~----~------~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~--- 189 (423)
||||||||.||++ ++.+.|||+|||+|.... . ...... ..-......+||.-|+|||++.+..
T Consensus 718 iIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~ 794 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNK 794 (1351)
T ss_pred eeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccccc
Confidence 9999999999999 589999999999998722 0 000000 1111334678999999999998765
Q ss_pred CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHH
Q 014544 190 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFL 269 (423)
Q Consensus 190 ~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 269 (423)
|+.|+|+|||||||+||+. ||. +.++....+..+....++.+ ..+...--+.-+.+|+.|++.||++|||+.+|
T Consensus 795 Yn~KiDmYSLGIVlFEM~y---PF~--TsMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eL 868 (1351)
T KOG1035|consen 795 YNSKIDMYSLGIVLFEMLY---PFG--TSMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATEL 868 (1351)
T ss_pred ccchhhhHHHHHHHHHHhc---cCC--chHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHH
Confidence 9999999999999999994 675 44555666666655555555 22222223456889999999999999999998
Q ss_pred HH
Q 014544 270 KR 271 (423)
Q Consensus 270 ~~ 271 (423)
+.
T Consensus 869 L~ 870 (1351)
T KOG1035|consen 869 LN 870 (1351)
T ss_pred hh
Confidence 75
No 382
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.9e-35 Score=273.28 Aligned_cols=234 Identities=26% Similarity=0.376 Sum_probs=190.8
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
||.|+||.||+|.+..+++.||+|++..... ...+..|+.+++.+.| +++..+...+......+++||++ +++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINH-PFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCC-CcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 6899999999999988899999998765432 2357889999999986 55555656666788899999999 999
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccccc
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYR 168 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 168 (423)
|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++ ..+.++|+|||++........
T Consensus 80 L~~~l~~-~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~~~~~~~~------- 148 (250)
T cd05123 80 LFSHLSK-EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAKELSSEGS------- 148 (250)
T ss_pred HHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcceecccCCC-------
Confidence 9998875 34689999999999999999999999999999999999994 778999999999987654321
Q ss_pred CCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHH
Q 014544 169 ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEF 248 (423)
Q Consensus 169 ~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 248 (423)
......++..|+|||.+.+...+.++|+||||+++|+|++|..||..... .+.+..+.......+ ...+..+
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~l 220 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKILKDPLRFP-----EFLSPEA 220 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHHhcCCCCCC-----CCCCHHH
Confidence 11245678899999999988889999999999999999999999976433 233333333232222 3448899
Q ss_pred HHHHHHHHcCCCCCCCChHH
Q 014544 249 ASYFHYCQSLTFDQRPDYGF 268 (423)
Q Consensus 249 ~~li~~cl~~dP~~RPt~~~ 268 (423)
.+++.+||..||++||++.+
T Consensus 221 ~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 221 RDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHHHhcCCHhhCCCccc
Confidence 99999999999999999944
No 383
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=280.32 Aligned_cols=137 Identities=27% Similarity=0.521 Sum_probs=116.5
Q ss_pred CCcccc-CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-hhHHHHHHHHHHHcCCC-------CCCeEEEe
Q 014544 1 MERIIG-VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-PQLLYEAKVYKILQGGS-------GIPNIKWY 71 (423)
Q Consensus 1 m~~ii~-~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-~~~~~E~~~l~~l~~~~-------~i~~i~~~ 71 (423)
+++++. ++|.+.++||.|.|++||+|.+..+.+.||+||.+..... +..+.|+++|+.++... +|+.+...
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~ 150 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDH 150 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecc
Confidence 466776 9999999999999999999999999999999998876543 34789999999997543 33333332
Q ss_pred ----eeeCCeeEEEEeccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEe
Q 014544 72 ----GVDGEDNVLVLDLLGPSLEDLFVYCR-RKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMG 137 (423)
Q Consensus 72 ----~~~~~~~~lv~e~~~~sL~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~ 137 (423)
|..+.+.|||+|++|.+|+.++.+.. +.++...+..|++||+.||.|||.+ ||||-||||+|||+.
T Consensus 151 FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 151 FKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred ceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 34677899999999999999998764 5599999999999999999999975 999999999999994
No 384
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=275.61 Aligned_cols=269 Identities=20% Similarity=0.304 Sum_probs=219.4
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-----CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-++|.+++.||+|+|..|.+++.+++.+.||+|++++. ...+-.+.|-.+......++.++-++.++......++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46899999999999999999999999999999986643 3344477888888888877877778889999999999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|.||. ||+|--.+.. .++++++.+..+...|+.||.|||++|||+||||.+|+|+ |..+.+||+|+|+++.-..+
T Consensus 329 vieyv~ggdlmfhmqr-qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQR-QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEecCcceeeehhh-hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCCC
Confidence 99999 8887666554 6689999999999999999999999999999999999999 69999999999999875444
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCc-----hhhhhHHHHHHHHhhccC
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGL-----KAATKKQKYDKICEKKVS 234 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~-----~~~~~~~~~~~i~~~~~~ 234 (423)
.. ...+++||+.|.|||++.|.+|+..+|+|+||++++||+.|+-||.-. ...+....+.-|+++.+.
T Consensus 405 gd-------~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 405 GD-------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred Cc-------ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 33 345889999999999999999999999999999999999999999632 122344556667777777
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceeceecc
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILK 294 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~~~ 294 (423)
.|. .++.....+++.-|++||.+|....-- .-|.++ .++.|.-..||+.+.
T Consensus 478 ipr-----slsvkas~vlkgflnkdp~erlgc~~~-~g~~di---k~h~ffr~idwd~le 528 (593)
T KOG0695|consen 478 IPR-----SLSVKASHVLKGFLNKDPKERLGCRPQ-TGFSDI---KSHAFFRSIDWDLLE 528 (593)
T ss_pred ccc-----eeehhhHHHHHHhhcCCcHHhcCCCcc-cchhhh---hcchhhhhCCHHHHh
Confidence 763 446778889999999999999643210 022222 345555567998764
No 385
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=302.39 Aligned_cols=258 Identities=21% Similarity=0.306 Sum_probs=208.1
Q ss_pred CceEEeceeeecCceeEEEEEEcC-------CCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVD-------TNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~-------~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
.+..+.+.||+|.||.|++|.... ....||||.++..... +.+..|+++|+.+.+|+++..+..+.....
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 445677799999999999997541 1456999987765443 568999999999998899888888777788
Q ss_pred eeEEEEecc-CCCHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccC
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR---------------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGR 140 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~ 140 (423)
..++|+||+ .|+|.+++...+ ..++..+.+.++.||+.|++||+++.+|||||..+|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~--- 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT--- 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec---
Confidence 999999999 999999998766 3489999999999999999999999999999999999995
Q ss_pred CCCeEEEeeccceeeccCCCCCCcccccCCCCcc--cccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCch
Q 014544 141 KANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLT--GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLK 217 (423)
Q Consensus 141 ~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~--gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~ 217 (423)
.+..+||+|||+|+......... . .... -...|||||.+....|+.++|||||||+|||+++ |..||.+..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~-----~-~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~ 526 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYR-----T-KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP 526 (609)
T ss_pred CCCEEEEccccceeccCCCCceE-----e-cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC
Confidence 77899999999998654433211 1 1112 2456999999999999999999999999999999 999999854
Q ss_pred hhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHh
Q 014544 218 AATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSR 279 (423)
Q Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 279 (423)
... ..+. .+........+. .+++++.++|..||+.+|++||+|.++.+.|...+..
T Consensus 527 ~~~--~l~~-~l~~G~r~~~P~---~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 527 PTE--ELLE-FLKEGNRMEQPE---HCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred cHH--HHHH-HHhcCCCCCCCC---CCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 221 2222 223333333333 3389999999999999999999999999999997664
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=7.6e-35 Score=300.94 Aligned_cols=259 Identities=20% Similarity=0.232 Sum_probs=172.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCC----CceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEE----e-eeeCC
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDT----NEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKW----Y-GVDGE 76 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~----~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~----~-~~~~~ 76 (423)
.++|++.+.||+|+||.||+|++..+ +..||||.+......+....| . +....+......+.. . .....
T Consensus 131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e-~-l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE-R-VRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH-H-HHhhchhhHHHHHHhhhcccccccCC
Confidence 46899999999999999999999888 899999987643322221111 1 111111111111111 1 24566
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCC-------------------CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEE
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRK-------------------FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLM 136 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~-------------------l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl 136 (423)
..++||||+ +++|.+++...... .....+..++.||+.||.|||++||+||||||+|||+
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl 288 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF 288 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEE
Confidence 789999999 78898888643211 1234466899999999999999999999999999999
Q ss_pred eccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCC----------------------CCCcc
Q 014544 137 GLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE----------------------QSRRD 194 (423)
Q Consensus 137 ~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~s~~s 194 (423)
+ ++.+.+||+|||+|+.+...... ......+++.|+|||.+.... ++.++
T Consensus 289 ~--~~~~~~KL~DFGlA~~l~~~~~~------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 289 S--EGSGSFKIIDLGAAADLRVGINY------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred e--CCCCcEEEEeCCCcccccccccc------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 5 34578999999999865433221 123567899999999764322 34467
Q ss_pred hHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh--------------ccCCchHH---hhccChHHHHHHHHHHHc
Q 014544 195 DLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK--------------KVSTPIEV---LCKSHPAEFASYFHYCQS 257 (423)
Q Consensus 195 DVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~--------------~~~~~~~~---~~~~~~~~l~~li~~cl~ 257 (423)
|||||||+||||+++..|+.... ..+...... ........ ..........+||.+||.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~ 435 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNL-----IQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMR 435 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHH-----HHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHcc
Confidence 99999999999999887765311 111111110 00000000 001112345689999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHhcC
Q 014544 258 LTFDQRPDYGFLKRLFHDLFSREG 281 (423)
Q Consensus 258 ~dP~~RPt~~~l~~~L~~~~~~~~ 281 (423)
.||.+||++.++++ +.+|...+
T Consensus 436 ~dP~kR~ta~e~L~--Hpff~~~~ 457 (566)
T PLN03225 436 FKGRQRISAKAALA--HPYFDREG 457 (566)
T ss_pred CCcccCCCHHHHhC--CcCcCCCC
Confidence 99999999999976 56665544
No 387
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=5.1e-36 Score=287.85 Aligned_cols=208 Identities=23% Similarity=0.299 Sum_probs=178.2
Q ss_pred CCccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCC-----CCCCeEEEeeee
Q 014544 1 MERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGG-----SGIPNIKWYGVD 74 (423)
Q Consensus 1 m~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~-----~~i~~i~~~~~~ 74 (423)
++.++.++|.+....|+|-|++|-+|.+..-+..|||||+.... .+..-++|+++|++|+.. .|+..+.-.+..
T Consensus 426 igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 426 IGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 46789999999999999999999999999889999999988654 455678999999999753 223333333556
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRK--FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~--l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
.+++|||+|.+.-+|.++++..+.. |.+..+..++.|+..||..|-..||+|.||||+|||+. .....+||||||.
T Consensus 506 knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfGS 583 (752)
T KOG0670|consen 506 KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFGS 583 (752)
T ss_pred cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCcc
Confidence 7899999999999999999876654 88899999999999999999999999999999999996 4577899999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhh
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA 219 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~ 219 (423)
|....+.... .+.-+..|.|||++.|.+|+...|+||+||+||||.||+..|.|.+..
T Consensus 584 A~~~~eneit---------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN 641 (752)
T KOG0670|consen 584 ASFASENEIT---------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN 641 (752)
T ss_pred cccccccccc---------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence 9877654432 334577899999999999999999999999999999999999986554
No 388
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=8.1e-35 Score=270.04 Aligned_cols=220 Identities=17% Similarity=0.170 Sum_probs=173.6
Q ss_pred cCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHh
Q 014544 18 GSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYC 96 (423)
Q Consensus 18 G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~ 96 (423)
|.||.||+|++..+++.||+|.+.... ....|...+.... ++++..+..++...+..+++|||+ +++|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHC-VPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcC-CCceeehhhheecCCeEEEEEecCCCCCHHHHHHH-
Confidence 899999999999999999999886543 2334444443333 366667777777888999999999 7899998865
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccc
Q 014544 97 RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGT 176 (423)
Q Consensus 97 ~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt 176 (423)
...+++..+..++.|++.||.|||++||+||||||+||++ +.++.++|+|||.+........ ...++
T Consensus 79 ~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~~~----------~~~~~ 145 (237)
T cd05576 79 FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDSCD----------GEAVE 145 (237)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccccc----------cCCcC
Confidence 3469999999999999999999999999999999999999 4788899999998866543211 23456
Q ss_pred cCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHH
Q 014544 177 ARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQ 256 (423)
Q Consensus 177 ~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl 256 (423)
..|+|||.+.+..++.++|||||||++|||++|..||...... + ...... .+...+++.++++|.+||
T Consensus 146 ~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~--------~-~~~~~~---~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 146 NMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG--------I-NTHTTL---NIPEWVSEEARSLLQQLL 213 (237)
T ss_pred ccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh--------c-cccccc---CCcccCCHHHHHHHHHHc
Confidence 7899999998888999999999999999999999887642211 0 000000 112345788999999999
Q ss_pred cCCCCCCCChH
Q 014544 257 SLTFDQRPDYG 267 (423)
Q Consensus 257 ~~dP~~RPt~~ 267 (423)
+.||++||++.
T Consensus 214 ~~dp~~R~~~~ 224 (237)
T cd05576 214 QFNPTERLGAG 224 (237)
T ss_pred cCCHHHhcCCC
Confidence 99999999974
No 389
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=287.24 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=210.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCC----ceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTN----EIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~----~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
..+..++||+|+||+||+|.|.-.+ .+||||++..... ..+++.|+-+|..|.|.+.+..+ .+.... ...|
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLL-gvc~~s-~~ql 774 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLL-GVCMLS-TLQL 774 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHh-hhcccc-hHHH
Confidence 3456789999999999999987444 3699998776543 45689999999999985544444 333222 2778
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
|++|+ .|.|.++++..+..+-....+.|+.||++||.|||.++++||||-.+|||+ .....|||.|||+|+.+...
T Consensus 775 vtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCcc
Confidence 99999 999999999988899999999999999999999999999999999999999 47889999999999988765
Q ss_pred CCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchH
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIE 238 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~ 238 (423)
......+ ...-.+.|||-|.+....|+.++|||||||++||++| |..||.+....+....+++ ..++..|
T Consensus 852 ~~ey~~~-----~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~--geRLsqP-- 922 (1177)
T KOG1025|consen 852 EKEYSAP-----GGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK--GERLSQP-- 922 (1177)
T ss_pred ccccccc-----ccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc--cccCCCC--
Confidence 5433221 3344678999999999999999999999999999999 9999999877655554433 2223333
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCC
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGY 282 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 282 (423)
. ..+-++.-+|.+||..|++.||+|+++...|.++.+....
T Consensus 923 p---iCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqr 963 (1177)
T KOG1025|consen 923 P---ICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQR 963 (1177)
T ss_pred C---CccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcce
Confidence 2 3388999999999999999999999999999988876553
No 390
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.6e-34 Score=314.25 Aligned_cols=248 Identities=13% Similarity=0.170 Sum_probs=187.1
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-C
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-G 86 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~ 86 (423)
.|...+.||+|+||.||+|++..++..||||.+..... ....|++++++++| ++++.+..++.+....++||||+ +
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~H-pnIv~~~~~~~~~~~~~lv~Ey~~~ 767 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQH-PNIVKLIGLCRSEKGAYLIHEYIEG 767 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCC-CCcceEEEEEEcCCCCEEEEeCCCC
Confidence 45667889999999999999988999999998764332 23456888888876 66777777777888899999999 8
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCC
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH---SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNR 163 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---s~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (423)
++|.+++. .+++..+..++.||+.||+||| +.+|+||||||+||++ +.++..++. ||.+......
T Consensus 768 g~L~~~l~----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~---~~~~~~~~~-~~~~~~~~~~---- 835 (968)
T PLN00113 768 KNLSEVLR----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIII---DGKDEPHLR-LSLPGLLCTD---- 835 (968)
T ss_pred CcHHHHHh----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEE---CCCCceEEE-eccccccccC----
Confidence 99999885 3899999999999999999999 6799999999999999 455666654 6654432211
Q ss_pred cccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhh-hHHHHHHH----------Hhhc
Q 014544 164 HIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAAT-KKQKYDKI----------CEKK 232 (423)
Q Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~-~~~~~~~i----------~~~~ 232 (423)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+.+. ....
T Consensus 836 -------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 836 -------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred -------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCcc
Confidence 13367899999999999999999999999999999999999995422110 00001000 0000
Q ss_pred cCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 233 VSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
...... .......++.+++.+||+.+|++||+++++++.|+.+..
T Consensus 909 ~~~~~~-~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 909 IRGDVS-VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred ccCCCC-ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 000000 000113467889999999999999999999999998765
No 391
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=273.66 Aligned_cols=258 Identities=22% Similarity=0.290 Sum_probs=195.1
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc-CCCCCCeEEEeeee----CCeeEEE
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ-GGSGIPNIKWYGVD----GEDNVLV 81 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~-~~~~i~~i~~~~~~----~~~~~lv 81 (423)
...++.+.||+|.||.||+|.. +++.||||++... ..+.+..|-+|+.... .|++|..+...... ...++||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~-~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ-EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHH-HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3456788999999999999987 5689999998753 4566888888887643 33555444444333 3478999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---------CccccccCCCceEEeccCCCCeEEEeecc
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR---------GFLHRDIKPDNFLMGLGRKANQVYIIDFG 151 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~---------giiHrDLKp~NILl~~~~~~~~vkL~DFG 151 (423)
++|. .|+|.+++. ...+++....+|+..|++||+|||+. .|+|||||.+|||+ ..+.+..|+|||
T Consensus 287 t~fh~kGsL~dyL~--~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK--ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHH--hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEEeeccc
Confidence 9999 999999998 45699999999999999999999963 59999999999999 589999999999
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhcCCC-CC-----CcchHHHHHHHHHHHHhCC------------CCC
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-QS-----RRDDLESLGYVLLYFLRGS------------LPW 213 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s-----~~sDVwSlGvil~elltG~------------~Pf 213 (423)
+|..+....... ..-..+||.+|||||++.|.- +. .+.||||+|.|||||+++- +||
T Consensus 362 LAl~~~p~~~~~-----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf 436 (534)
T KOG3653|consen 362 LALRLEPGKPQG-----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF 436 (534)
T ss_pred eeEEecCCCCCc-----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence 999887443222 223578999999999998754 22 3689999999999999752 334
Q ss_pred CCc--hhhhhHHHHHHHHhhccCCchHHhh--ccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHH
Q 014544 214 QGL--KAATKKQKYDKICEKKVSTPIEVLC--KSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLF 277 (423)
Q Consensus 214 ~~~--~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 277 (423)
... ......+....+..++.++.++..+ ......+++.+..||..|++.|.|+.-+.+.+.++.
T Consensus 437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 310 1112223333344555544444433 334567999999999999999999999988887764
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-34 Score=282.00 Aligned_cols=269 Identities=22% Similarity=0.299 Sum_probs=204.2
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
..-|..++.||-|+||+|.+++..+|...||+|.+++... ...+..|-.||..-.. +-++.+++-+.+.+.+|+
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn-~WVVrLyySFQDkdnLYF 706 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN-EWVVRLYYSFQDKDNLYF 706 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC-cceEEEEEEeccCCceEE
Confidence 4568899999999999999999999999999998775432 2235677788877654 667778888889999999
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
||+|. ||++-.+|.. -+-|.+..+..++..+..|+++.|+.|+|||||||+|||| |.+|.+||+||||+.-++-.
T Consensus 707 VMdYIPGGDmMSLLIr-mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 707 VMDYIPGGDMMSLLIR-MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEeccCCccHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceec
Confidence 99999 9999999986 4569999999999999999999999999999999999999 69999999999998744311
Q ss_pred CCC------Cc---------------------cccc--------CCCCcccccCccccchhcCCCCCCcchHHHHHHHHH
Q 014544 160 TTN------RH---------------------IPYR--------ENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLL 204 (423)
Q Consensus 160 ~~~------~~---------------------~~~~--------~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ 204 (423)
... .| +..+ ....++||+.|+|||++....|+..+|+||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 000 00 0000 123578999999999999999999999999999999
Q ss_pred HHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC---hHHHHHHHHHHHHhcC
Q 014544 205 YFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD---YGFLKRLFHDLFSREG 281 (423)
Q Consensus 205 elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt---~~~l~~~L~~~~~~~~ 281 (423)
||+.|+.||...+......++... +.-+.. ..|.+++.+..++|.++. .+++.|.. +++| ..
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw-~~~l~~---~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~v----------Ka 927 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINW-RNFLHI---PYQGNLSKEALDLIQKLC-CSADSRLGKNGADQV----------KA 927 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeeh-hhcccc---ccccccCHHHHHHHHHHh-cChhhhhcccchhhh----------hc
Confidence 999999999876554333222111 111111 134566888888888654 46777753 2323 34
Q ss_pred CCCCcceeceecc
Q 014544 282 YDFDFVFDWTILK 294 (423)
Q Consensus 282 ~~~~~~~dw~~~~ 294 (423)
+.|....||..++
T Consensus 928 HpfFkgIDfsslR 940 (1034)
T KOG0608|consen 928 HPFFKGIDFSSLR 940 (1034)
T ss_pred CccccccchHhhh
Confidence 5666677886543
No 393
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=3.2e-32 Score=251.05 Aligned_cols=236 Identities=26% Similarity=0.363 Sum_probs=188.4
Q ss_pred CceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHH
Q 014544 19 SFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFV 94 (423)
Q Consensus 19 ~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~ 94 (423)
+||.||+|.+..+++.||+|++..... ...+.+|++.++.++| +++..+..+.......++++|++ +++|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKH-PNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCC-CcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 589999999988899999999876554 4678999999999955 56666666666778899999999 559999887
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcc
Q 014544 95 YCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLT 174 (423)
Q Consensus 95 ~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~ 174 (423)
... .++...++.++.+++.+|.|||+.+++|+||+|+||+++ ..+.++|+|||.+........ .....
T Consensus 80 ~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~~~~~~~~~--------~~~~~ 147 (244)
T smart00220 80 KRG-RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLARQLDPGGL--------LTTFV 147 (244)
T ss_pred hcc-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccceeeeccccc--------ccccc
Confidence 533 389999999999999999999999999999999999994 678999999999987655421 12456
Q ss_pred cccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHH
Q 014544 175 GTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 254 (423)
Q Consensus 175 gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~ 254 (423)
++..|++||.+.+..++.++||||||+++|+|++|..||...... ......+........ .....++.++.+++.+
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKIGKPKPPFP--PPEWKISPEAKDLIRK 223 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHhccCCCCc--cccccCCHHHHHHHHH
Confidence 788999999999888999999999999999999999999763221 122222222221111 1111157899999999
Q ss_pred HHcCCCCCCCChHHHHH
Q 014544 255 CQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 255 cl~~dP~~RPt~~~l~~ 271 (423)
||..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999875
No 394
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-33 Score=260.26 Aligned_cols=261 Identities=18% Similarity=0.269 Sum_probs=205.8
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCC-----CceEEEEEecCCCCchh---HHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDT-----NEIVAVKIENSGTKHPQ---LLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~-----~~~vaiKi~~~~~~~~~---~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
-..++++...+-+|.||.||.|.|++. .+.|.+|..+.....-+ ++.|.-.+..+.|++..+.......+..
T Consensus 282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~ 361 (563)
T KOG1024|consen 282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA 361 (563)
T ss_pred hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC
Confidence 345788888999999999999988743 23466776655443333 6677777777777665565566666777
Q ss_pred eeEEEEecc-CCCHHHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEe
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCR-------RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~-------~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
..++++.+. -|+|..++..++ +.++..+...++.|++.|++|||++||||.||..+|++| |+.-+|||+
T Consensus 362 ~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVklt 438 (563)
T KOG1024|consen 362 TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVKLT 438 (563)
T ss_pred cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEEec
Confidence 788888888 689999998654 247778889999999999999999999999999999999 688999999
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~ 227 (423)
|=.+++.+-...... -.........|||||.+....|+.++||||||++||||+| |+.||...++.+....+..
T Consensus 439 DsaLSRDLFP~DYhc-----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 439 DSALSRDLFPGDYHC-----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred cchhccccCcccccc-----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 999998765544321 1223345678999999999999999999999999999999 9999998776543333221
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
+.++..| -++|+++..+|..||...|++||++++++..|.++-.+.
T Consensus 514 --GyRlaQP-----~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 514 --GYRLAQP-----FNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred --cceecCC-----CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 2334444 244999999999999999999999999999999886654
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-33 Score=240.35 Aligned_cols=211 Identities=20% Similarity=0.275 Sum_probs=167.4
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC---chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
+...-+..||+|+||.|-+.++..+|...|+|.+...-. ..++++|+.+......++.+..++.........+|.||
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME 125 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICME 125 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHH
Confidence 344556789999999999999999999999997765433 33467777776665555554444333346778999999
Q ss_pred ccCCCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 84 LLGPSLEDLFVY---CRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~~~sL~~~l~~---~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
.+..+|..+..+ .+..+++..+-+|+..++.||.|||++ .+||||+||+|||+ +..|+||+||||.+-.+.++
T Consensus 126 ~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 126 LMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred HhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceeehhh
Confidence 999999888753 356799999999999999999999987 89999999999999 58999999999999887665
Q ss_pred CCCCcccccCCCCcccccCccccchhcCC----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHh
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLGI----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICE 230 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~ 230 (423)
-... .-.|...|||||.+..+ .|+.++||||||++++||.++++||.... +..+++..+.+
T Consensus 203 iAkt--------~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~--tpF~qLkqvVe 267 (282)
T KOG0984|consen 203 IAKT--------MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG--TPFQQLKQVVE 267 (282)
T ss_pred hHHH--------HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC--CHHHHHHHHhc
Confidence 4321 24678899999998633 58999999999999999999999998643 34455555544
No 396
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=283.85 Aligned_cols=247 Identities=21% Similarity=0.196 Sum_probs=190.2
Q ss_pred EeceeeecCce-eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccCCCH
Q 014544 11 LGRKIGSGSFG-EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLGPSL 89 (423)
Q Consensus 11 i~~~Lg~G~fg-~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~~sL 89 (423)
-.+.+|.|+.| .||+|.. .++.||||.+-.. ...-..+|+..|+.-..|+++..++....+....||..|+|..+|
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e-~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL 589 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE-FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSL 589 (903)
T ss_pred cHHHcccCCCCcEEEEEee--CCceehHHHHhhH-hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhH
Confidence 34678899887 6899988 6889999965432 234568999999998888888777666778888999999999999
Q ss_pred HHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC--CCeEEEeeccceeeccCCCCCCc
Q 014544 90 EDLFVYCRRK---FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK--ANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 90 ~~~l~~~~~~---l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~--~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
.+++...... ......+.++.|++.||++||+.+||||||||.||||+..+. ..+++|+|||+++.+......
T Consensus 590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS-- 667 (903)
T KOG1027|consen 590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSS-- 667 (903)
T ss_pred HHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcch--
Confidence 9999753111 112456788999999999999999999999999999975433 358899999999998765443
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhhccCCchHHhhcc
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKS 243 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 243 (423)
++......||-.|+|||++.....+.++|||||||++|+.++ |++||..... .-..|......... +...
T Consensus 668 --~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~-----R~~NIl~~~~~L~~--L~~~ 738 (903)
T KOG1027|consen 668 --FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLE-----RQANILTGNYTLVH--LEPL 738 (903)
T ss_pred --hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHH-----hhhhhhcCccceee--eccC
Confidence 233557889999999999999888899999999999999999 5999986332 11223333222110 0001
Q ss_pred ChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 244 HPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 244 ~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...+..+||.+|++.+|..||++.+|+.
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 1127899999999999999999999854
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-33 Score=250.10 Aligned_cols=257 Identities=20% Similarity=0.290 Sum_probs=195.4
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC-CCchhHHHHHHHHHHHcCCCCCCeE-EEeeeeCCeeEEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG-TKHPQLLYEAKVYKILQGGSGIPNI-KWYGVDGEDNVLVL 82 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~-~~~~~~~~E~~~l~~l~~~~~i~~i-~~~~~~~~~~~lv~ 82 (423)
+.+.|.|.+.||+|.||.+-+|+++.++..+|+|.+... ....+|.+|...--.|.+|.+|..- ...++..+.+++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 457899999999999999999999999999999976544 4556789998877777766665443 44456677889999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||+ .|+|.+-+.. ..+-+.....++.|+++||.|||++++||||||.+||||-.. +..+|||||||+.+.....-.
T Consensus 102 E~aP~gdL~snv~~--~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~-df~rvKlcDFG~t~k~g~tV~ 178 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEA--AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA-DFYRVKLCDFGLTRKVGTTVK 178 (378)
T ss_pred ccCccchhhhhcCc--ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC-CccEEEeeecccccccCceeh
Confidence 999 8888887653 458889999999999999999999999999999999999533 455999999999876543221
Q ss_pred CCcccccCCCCcccccCccccchhcCC-----CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHH--HhhccC
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGI-----EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI--CEKKVS 234 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i--~~~~~~ 234 (423)
...-+..|.+||..... ...+.+|||.||+++|.++||++||+... ...+.|.+. ..++..
T Consensus 179 ----------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~--~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 179 ----------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS--IMDKPYWEWEQWLKRKN 246 (378)
T ss_pred ----------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh--ccCchHHHHHHHhcccC
Confidence 23346678999977532 24678999999999999999999998432 222222222 122333
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
...+.....+++.+..++++-|..+|++|-..-+..+.-...
T Consensus 247 ~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 247 PALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred ccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 344555567788999999999999999996555555444333
No 398
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.2e-34 Score=256.29 Aligned_cols=253 Identities=19% Similarity=0.273 Sum_probs=187.3
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeeee----CCeeEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGVD----GEDNVL 80 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~----~~~~~l 80 (423)
.+--+.||.|+||.||.+++..+|+.||+|.+..- ...+.+.+|++++..++|.+.+..+...... -...|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34457899999999999999999999999965422 2345688999999999886554333222111 134678
Q ss_pred EEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 81 VLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 81 v~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
++|++..+|..++.. ...++...+.-++.||++||+|||+.||+||||||.|.|+ +.+..+||||||+|+......
T Consensus 135 ~TELmQSDLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 135 LTELMQSDLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHhhhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEecccccccccchhh
Confidence 899998888887764 5569999999999999999999999999999999999999 588999999999999866544
Q ss_pred CCCcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc-------
Q 014544 161 TNRHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK------- 232 (423)
Q Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~------- 232 (423)
.... ...+-|-.|.|||++.|.. |+.+.||||.|||+.||+..+..|+........+.+..+++..
T Consensus 211 ~~hM------TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 211 RLNM------THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred hhhh------HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHH
Confidence 3221 1345688999999999876 8999999999999999999999998765544333332222111
Q ss_pred -------------cCCc-hHHhhc-----cChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 -------------VSTP-IEVLCK-----SHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 -------------~~~~-~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
...| ...+.. ....+...++..++..||+.|.+.++.+.
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 1111 011110 11235677888899999999988766544
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=4e-31 Score=267.34 Aligned_cols=257 Identities=19% Similarity=0.174 Sum_probs=177.2
Q ss_pred ccccCceEEeceeeecCceeEEEEEEc----------------CCCceEEEEEecCCCC----------------chhHH
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHV----------------DTNEIVAVKIENSGTK----------------HPQLL 50 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~----------------~~~~~vaiKi~~~~~~----------------~~~~~ 50 (423)
++-.++|++.++||+|+||.||+|.+. ..++.||||.+..... .+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 344679999999999999999999752 2346799998764321 11234
Q ss_pred HHHHHHHHHcCCCCCC----eEEEeee--------eCCeeEEEEecc-CCCHHHHHHHhc--------------------
Q 014544 51 YEAKVYKILQGGSGIP----NIKWYGV--------DGEDNVLVLDLL-GPSLEDLFVYCR-------------------- 97 (423)
Q Consensus 51 ~E~~~l~~l~~~~~i~----~i~~~~~--------~~~~~~lv~e~~-~~sL~~~l~~~~-------------------- 97 (423)
.|+.++.++.+.+... .+..|+. .....++||||+ +++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 4666777777654321 1211211 235679999999 889988876321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcc
Q 014544 98 ---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLT 174 (423)
Q Consensus 98 ---~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~ 174 (423)
..+++..++.++.|++.||.|||+++|+||||||+|||+ +.++.+||+|||+++........ ......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~------~~~~g~ 371 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINF------NPLYGM 371 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCcc------CccccC
Confidence 124567889999999999999999999999999999999 46789999999999765332111 111234
Q ss_pred cccCccccchhcCCC--------------------C--CCcchHHHHHHHHHHHHhCCC-CCCCchhhhhH--------H
Q 014544 175 GTARYASCNTHLGIE--------------------Q--SRRDDLESLGYVLLYFLRGSL-PWQGLKAATKK--------Q 223 (423)
Q Consensus 175 gt~~Y~aPE~~~~~~--------------------~--s~~sDVwSlGvil~elltG~~-Pf~~~~~~~~~--------~ 223 (423)
+|+.|+|||.+.... + ..+.||||+||++|+|++|.+ ||.+....... .
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 578999999986432 1 134799999999999999986 77643221110 1
Q ss_pred HHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCC---CCCCChHHHHH
Q 014544 224 KYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTF---DQRPDYGFLKR 271 (423)
Q Consensus 224 ~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPt~~~l~~ 271 (423)
.+..+.......+ .....++..++|+.+||..+| .+|++++++++
T Consensus 452 ~~r~~~~~~~~~~---~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 452 RWRMYKGQKYDFS---LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHHhhcccCCCcc---cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 1111111222222 234557899999999999876 68999998865
No 400
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=1.4e-32 Score=240.21 Aligned_cols=251 Identities=19% Similarity=0.301 Sum_probs=192.7
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeC--CeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDG--EDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~--~~~~lv~e 83 (423)
..+|++.+++|+|.|++||.|....+++.++||+++.- ....+.+|+++|+.|.++++|..+.....+. ....+|+|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE 115 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFE 115 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhh
Confidence 46899999999999999999999999999999998763 4567899999999999888887775554443 44679999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|. ..+...++. .++...+..++.+++.||.|+|++||+|||+||.|++|+ .....++|+|+|+|..+......
T Consensus 116 ~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 116 YVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred hhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcCCCcee
Confidence 99 555555543 588899999999999999999999999999999999995 45678999999999877654322
Q ss_pred CcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCC-chhhhhHHHHHHHHh----------
Q 014544 163 RHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQG-LKAATKKQKYDKICE---------- 230 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~-~~~~~~~~~~~~i~~---------- 230 (423)
...+.+..|--||.+.... |+..-|+|||||+|..|+..+.||.. .+..+..-++.++++
T Consensus 190 --------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 190 --------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred --------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 2346677888999998655 78899999999999999999999853 333322222222211
Q ss_pred --------------hccCCchHHhh-----ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 231 --------------KKVSTPIEVLC-----KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 231 --------------~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....+...+. .-.+++..+|+.++|..|-.+|+|+.|...
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 11111111110 112578999999999999999999998754
No 401
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=8.3e-30 Score=229.01 Aligned_cols=208 Identities=30% Similarity=0.440 Sum_probs=180.4
Q ss_pred eeecCceeEEEEEEcCCCceEEEEEecCCCCc---hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHH
Q 014544 15 IGSGSFGEIFLASHVDTNEIVAVKIENSGTKH---PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLE 90 (423)
Q Consensus 15 Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~---~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~ 90 (423)
||+|++|.||++....+++.+++|+....... ..+.+|++.++.+.+ ++++.+..+.......+++||++ +++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~-~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH-PNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC-CCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 68999999999999888999999998876653 679999999999987 67777777777778999999999 59999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC-CCeEEEeeccceeeccCCCCCCcccccC
Q 014544 91 DLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-ANQVYIIDFGLAKKYRDPTTNRHIPYRE 169 (423)
Q Consensus 91 ~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~-~~~vkL~DFGla~~~~~~~~~~~~~~~~ 169 (423)
+++......++...++.++.+++.+|.+||++|++|+||+|.||++. . .+.++|+|||.+........ .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcc-------h
Confidence 99876445689999999999999999999999999999999999994 5 68999999999987654431 1
Q ss_pred CCCcccccCccccchhcCC-CCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHH
Q 014544 170 NKNLTGTARYASCNTHLGI-EQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEF 248 (423)
Q Consensus 170 ~~~~~gt~~Y~aPE~~~~~-~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 248 (423)
.....+...|++||.+... .++.++|+|+||+++++| ..+
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------~~~ 190 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------PEL 190 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------HHH
Confidence 1245678899999999887 788999999999999999 468
Q ss_pred HHHHHHHHcCCCCCCCChHHHHHH
Q 014544 249 ASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 249 ~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
.+++..|+..+|++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 899999999999999999988764
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=259.66 Aligned_cols=195 Identities=24% Similarity=0.351 Sum_probs=168.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----------CchhHHHHHHHHHHHcC--CCCCCeEEEeeeeC
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----------KHPQLLYEAKVYKILQG--GSGIPNIKWYGVDG 75 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----------~~~~~~~E~~~l~~l~~--~~~i~~i~~~~~~~ 75 (423)
.|..++.||+|+||.|++|.+++....|+||.+.+.. .--.+-.|+.||..|+. |++|.++..++++.
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 4999999999999999999999999999999766543 12235689999999983 35566667888899
Q ss_pred CeeEEEEecc--CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 76 EDNVLVLDLL--GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 76 ~~~~lv~e~~--~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
+++||+||-- +-+|.+++.. ...+++.++..|+.|++.|+++||++||||||||-+|+.+ +.+|.+||+|||.|
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~-kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgsa 717 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEF-KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGSA 717 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhc-cCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccch
Confidence 9999999998 5678887764 5679999999999999999999999999999999999999 68999999999998
Q ss_pred eeccCCCCCCcccccCCCCcccccCccccchhcCCCC-CCcchHHHHHHHHHHHHhCCCCCCC
Q 014544 154 KKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQ-SRRDDLESLGYVLLYFLRGSLPWQG 215 (423)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDVwSlGvil~elltG~~Pf~~ 215 (423)
....... ...++||..|+|||++.|..| +..-|||+||++||-++....||..
T Consensus 718 a~~ksgp---------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 718 AYTKSGP---------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhcCCC---------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 7654322 237899999999999999886 6788999999999999999999864
No 403
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-31 Score=241.16 Aligned_cols=252 Identities=20% Similarity=0.236 Sum_probs=192.8
Q ss_pred ccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----CCchhHHHHHHHHHHHcCCCCCCeEEEeee-----eC
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----TKHPQLLYEAKVYKILQGGSGIPNIKWYGV-----DG 75 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~-----~~ 75 (423)
+..+|.-++.+|.|.- .|-.|.+.-.++.||+|..... ...++..+|..++..+.|.+.+..+..+.. .-
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 4568888899999988 7888888888999999965433 334567899999999998766655544433 22
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
...|+|||++..+|...+. -.++-+++..|+.|++.|++|||+.||+||||||+||++ ..++.+||.|||+|+.
T Consensus 94 ~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGLART 167 (369)
T ss_pred HhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchhhcc
Confidence 4579999999999999887 247888999999999999999999999999999999999 5889999999999986
Q ss_pred ccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhc---
Q 014544 156 YRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKK--- 232 (423)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~--- 232 (423)
..... .....+.|..|.|||++.+-.+...+||||+||++.||++|+..|.|.+..+...++....+..
T Consensus 168 e~~~~--------~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 168 EDTDF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred cCccc--------ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence 54331 1235688999999999999999999999999999999999999998754332222111111000
Q ss_pred -------------------cCCchHHhh------------ccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 233 -------------------VSTPIEVLC------------KSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 233 -------------------~~~~~~~~~------------~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......... +.-....++++.+||..||++|.+++++++
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000000000 111346889999999999999999988865
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=5e-31 Score=249.09 Aligned_cols=261 Identities=24% Similarity=0.370 Sum_probs=199.2
Q ss_pred ccCceEEeceeeecCceeEEEEEEcC---CCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 5 IGVKYKLGRKIGSGSFGEIFLASHVD---TNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 5 i~~~y~i~~~Lg~G~fg~Vy~a~~~~---~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+.+.|.++++||+|+|++||++.+.. ..+.||+|.+........+..|++.|..+.+..++..+..+....+..++|
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV 113 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence 45679999999999999999999887 788899998888777788999999999999999999998888899999999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
|||+ .....+++. .++...+..+++.++.||.++|.+|||||||||.|||++ ...++-.|+|||+|.......
T Consensus 114 lp~~~H~~f~~l~~----~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR----SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred ecccCccCHHHHHh----cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHHHHhhh
Confidence 9999 556666654 478999999999999999999999999999999999996 566788999999997211000
Q ss_pred ------C----------C---------------------CcccccCCCCcccccCccccchhcCCC-CCCcchHHHHHHH
Q 014544 161 ------T----------N---------------------RHIPYRENKNLTGTARYASCNTHLGIE-QSRRDDLESLGYV 202 (423)
Q Consensus 161 ------~----------~---------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~s~~sDVwSlGvi 202 (423)
. . ....-.......||+.|.|||++...+ .+.++||||.|+|
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 0 0 000011233567999999999988654 7899999999999
Q ss_pred HHHHHhCCCCCCCchhhh-h-H-----------HHHHHHHhh-----------------ccCC--------------chH
Q 014544 203 LLYFLRGSLPWQGLKAAT-K-K-----------QKYDKICEK-----------------KVST--------------PIE 238 (423)
Q Consensus 203 l~elltG~~Pf~~~~~~~-~-~-----------~~~~~i~~~-----------------~~~~--------------~~~ 238 (423)
+.-++++.+||....+.. . . .+.....+. .+.. ...
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 999999999995422110 0 0 000000000 0000 001
Q ss_pred HhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 239 VLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 239 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......|..+.+|+.+||..||.+|.++++.+.
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 111223568899999999999999999998754
No 405
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=5.8e-32 Score=266.88 Aligned_cols=250 Identities=18% Similarity=0.276 Sum_probs=203.0
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~--~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..+|+++.++|+|.||.||+|+++.+++..|+|+++.. .....+..|+-+++..+|++.++.+..| ...+..+|+||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-lr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-LRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-hhhcCcEEEEE
Confidence 46899999999999999999999999999999987754 3455678899888888886655554433 35567899999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN 162 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~ 162 (423)
|| +|+|.+...- .+.+++.++...++..+.||+|||++|-+|||||-.|||++ +.+.|||.|||.+..+...-.
T Consensus 93 ycgggslQdiy~~-TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt---d~gDvklaDfgvsaqitati~- 167 (829)
T KOG0576|consen 93 YCGGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT---DEGDVKLADFGVSAQITATIA- 167 (829)
T ss_pred ecCCCcccceeee-cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec---ccCceeecccCchhhhhhhhh-
Confidence 99 7888887653 56799999999999999999999999999999999999995 899999999999987765443
Q ss_pred CcccccCCCCcccccCccccchhc---CCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHH
Q 014544 163 RHIPYRENKNLTGTARYASCNTHL---GIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEV 239 (423)
Q Consensus 163 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (423)
..+.+.||+.|||||+.. ...|...+|||++|++..|+-.-+.|....... +.+...-...+..|.-.
T Consensus 168 ------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 168 ------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMTKSGFQPPTLK 238 (829)
T ss_pred ------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhhccCCCCCccc
Confidence 345889999999999864 456899999999999999999888887654443 22222223344444444
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 270 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 270 (423)
....+.+.|.+|++.||.++|.+||+++.++
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhhe
Confidence 4456788999999999999999999998764
No 406
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=4.9e-28 Score=221.09 Aligned_cols=197 Identities=32% Similarity=0.489 Sum_probs=166.0
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
|.+.+.||.|++|.||+|....+++.+++|...... ....+.+|++.+..+.+ +++..+..+.......++++|++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~-~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKH-PNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCC-CChhhheeeeecCCceEEEEecc
Confidence 678899999999999999998888999999887654 34568889999999976 55666666666778899999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+++|.+++......+++..+..++.|++.+|.+||+++++|+||+|.||+++ ..+.++|+|||++.........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~~~~~~~~~~~-- 154 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGLARFIHRDLAA-- 154 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCceeeEecCcccc--
Confidence 5599998876433389999999999999999999999999999999999994 6689999999999887654310
Q ss_pred ccccCCCCcccccCccccchh-cCCCCCCcchHHHHHHHHHHHHhCCCCCCC
Q 014544 165 IPYRENKNLTGTARYASCNTH-LGIEQSRRDDLESLGYVLLYFLRGSLPWQG 215 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~s~~sDVwSlGvil~elltG~~Pf~~ 215 (423)
......++..|++||.+ ....++.++|||+||+++|+|++|+.||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 11245678899999999 666788899999999999999999999965
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.96 E-value=1.8e-28 Score=216.68 Aligned_cols=167 Identities=17% Similarity=0.181 Sum_probs=129.4
Q ss_pred CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCccc
Q 014544 87 PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIP 166 (423)
Q Consensus 87 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~ 166 (423)
|+|.+++...+..+++..++.|+.||+.||.|||+++ ||+|||+ +.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPE------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeeccc-------
Confidence 6899999866667999999999999999999999998 9999999 47888998 9999875432
Q ss_pred ccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchH--HhhccC
Q 014544 167 YRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIE--VLCKSH 244 (423)
Q Consensus 167 ~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~ 244 (423)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+..+.......... .....+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL--SAILEILLNGMPADDPRDRSNLESV 135 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--cHHHHHHHHHhccCCccccccHHHH
Confidence 125789999999999999999999999999999999999999764321 12222222221111000 001112
Q ss_pred hH--HHHHHHHHHHcCCCCCCCChHHHHHHHHHHHH
Q 014544 245 PA--EFASYFHYCQSLTFDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 245 ~~--~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 278 (423)
+. ++.++|.+||..+|.+||++.+|++.+..+..
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 33 69999999999999999999999998776654
No 408
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=5.8e-29 Score=268.70 Aligned_cols=188 Identities=14% Similarity=0.180 Sum_probs=135.1
Q ss_pred CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEec----------------
Q 014544 75 GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL---------------- 138 (423)
Q Consensus 75 ~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~---------------- 138 (423)
....+++||+++++|.+++......+++.+++.++.||+.||.|||++||+||||||+||||+.
T Consensus 52 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~ 131 (793)
T PLN00181 52 DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131 (793)
T ss_pred cchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCccc
Confidence 3457888999999999999765567999999999999999999999999999999999999941
Q ss_pred cCCCCeEEEeeccceeeccCCCC--------CCcccc-cCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhC
Q 014544 139 GRKANQVYIIDFGLAKKYRDPTT--------NRHIPY-RENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRG 209 (423)
Q Consensus 139 ~~~~~~vkL~DFGla~~~~~~~~--------~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG 209 (423)
.+..+.+||+|||+++....... ....++ .......||+.|+|||++.+..++.++|||||||+||||++|
T Consensus 132 ~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhC
Confidence 12344566777777654321100 000000 001124689999999999999999999999999999999999
Q ss_pred CCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 210 SLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 210 ~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..|+.... ..+..+...... +. .... .+....++..||..+|.+||++.+|++
T Consensus 212 ~~~~~~~~-----~~~~~~~~~~~~-~~--~~~~-~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 212 VSSREEKS-----RTMSSLRHRVLP-PQ--ILLN-WPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCchhhHH-----HHHHHHHHhhcC-hh--hhhc-CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 88876421 111111111111 11 1111 345678999999999999999999975
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94 E-value=5.2e-26 Score=221.15 Aligned_cols=180 Identities=19% Similarity=0.206 Sum_probs=136.1
Q ss_pred ccccCceEEeceeeecCceeEEEEEEcC-CCceEEEEEecCCC-------CchhHHHHHHHHHHHcCCCCCCeEEEeeee
Q 014544 3 RIIGVKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGT-------KHPQLLYEAKVYKILQGGSGIPNIKWYGVD 74 (423)
Q Consensus 3 ~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~-~~~~vaiKi~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~ 74 (423)
+.+.++|.+.+.||+|+||+||+|.+.. +++.||||++.... ....+.+|+++++.|.|++.++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 5678999999999999999999999876 67778999765321 123488999999999998877766543
Q ss_pred CCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc-CCCceEEeccCCCCeEEEeeccc
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI-KPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDL-Kp~NILl~~~~~~~~vkL~DFGl 152 (423)
...++||||+ |++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||++ .++.+||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~----~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGl 158 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR----PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQL 158 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC----ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECcc
Confidence 3579999999 667752 21 111 1467899999999999999999999 99999994 678899999999
Q ss_pred eeeccCCCCCCccc-ccCCCCcccccCccccchhcCCC------CCCcchHH
Q 014544 153 AKKYRDPTTNRHIP-YRENKNLTGTARYASCNTHLGIE------QSRRDDLE 197 (423)
Q Consensus 153 a~~~~~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~------~s~~sDVw 197 (423)
|+.+........+. +..-....++..|+|||.+...+ .+..+|-|
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 99876654332221 11223667889999999987543 23446665
No 410
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=6.2e-24 Score=202.89 Aligned_cols=257 Identities=30% Similarity=0.425 Sum_probs=191.9
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
|++.+.||.|+||.||++.+. ..+++|.+..... ...+.+|+.++..+.+++++..+..++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 789999999999999999986 6789998765543 34588999999999987666666666666666899999
Q ss_pred cc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCC-eEEEeeccceeeccCC
Q 014544 84 LL-GPSLEDLFVYCR--RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKAN-QVYIIDFGLAKKYRDP 159 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~-~vkL~DFGla~~~~~~ 159 (423)
++ ++++.+++.... ..+....+..++.|++.+|.|+|+.+++||||||+||++. ..+ .++++|||+++.+...
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~---~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD---RDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---CCCCeEEEeccCcceecCCC
Confidence 99 788886665433 2699999999999999999999999999999999999994 555 7999999999865544
Q ss_pred CCCCcccccCCCCcccccCccccchhcC---CCCCCcchHHHHHHHHHHHHhCCCCCCCchhh-hhHHHHHHHHhhccCC
Q 014544 160 TTNRHIPYRENKNLTGTARYASCNTHLG---IEQSRRDDLESLGYVLLYFLRGSLPWQGLKAA-TKKQKYDKICEKKVST 235 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~-~~~~~~~~i~~~~~~~ 235 (423)
....... .......||..|+|||.+.+ ..++...|+||+|++++++++|..||...... ........+.......
T Consensus 156 ~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 156 GSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred Ccccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 3211000 12346789999999999998 57889999999999999999999998765431 0112222222211110
Q ss_pred chHHhhcc----ChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 236 PIEVLCKS----HPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 236 ~~~~~~~~----~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
........ ....+.+++..|+..+|..|.+.......
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00001111 12578999999999999999988766553
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=3.3e-25 Score=228.99 Aligned_cols=254 Identities=20% Similarity=0.253 Sum_probs=183.5
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecC----CCCchh----HHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS----GTKHPQ----LLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~----~~~~~~----~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
...+.+|.|++|.|+.+......+.++.|.... ...... +..|.-+-..|.|.+.+..+..+.. .....-+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-IDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh-cccchhh
Confidence 467789999999999888776666666664431 111111 3334444445555444433322222 2222223
Q ss_pred EeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 82 LDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 82 ~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
||||.++|..++.. ...++..++..++.|++.|++|||+.||.||||||+|+++. ..+.+||+|||.+..+..+..
T Consensus 400 mE~~~~Dlf~~~~~-~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMS-NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred hhcccHHHHHHHhc-ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeeccCcc
Confidence 99996588888764 34799999999999999999999999999999999999995 778999999999988765543
Q ss_pred CCcccccCCCCcccccCccccchhcCCCCCC-cchHHHHHHHHHHHHhCCCCCCCchhhhhH-HHHHHHHhhccCCchHH
Q 014544 162 NRHIPYRENKNLTGTARYASCNTHLGIEQSR-RDDLESLGYVLLYFLRGSLPWQGLKAATKK-QKYDKICEKKVSTPIEV 239 (423)
Q Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~-~sDVwSlGvil~elltG~~Pf~~~~~~~~~-~~~~~i~~~~~~~~~~~ 239 (423)
... ......+|+..|+|||++.+.+|++ ..||||.|++++.|.+|+.||......+.. .................
T Consensus 476 ~~~---~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~ 552 (601)
T KOG0590|consen 476 KNI---HESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR 552 (601)
T ss_pred hhh---hhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH
Confidence 311 1345789999999999999999875 679999999999999999999764433221 11111112233333445
Q ss_pred hhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 240 LCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 240 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
+...+|...+.+|.+||+.+|.+|.++++|++
T Consensus 553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 553 LLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 55677999999999999999999999999876
No 412
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.91 E-value=3.6e-24 Score=200.06 Aligned_cols=231 Identities=23% Similarity=0.253 Sum_probs=149.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----chhHHHHHHHHHHHcC---------C--CCCCe----
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----HPQLLYEAKVYKILQG---------G--SGIPN---- 67 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----~~~~~~E~~~l~~l~~---------~--~~i~~---- 67 (423)
.+...+.||.|+++.||.+++..+++.+|||+...... .+++.+|.-....+.+ + -.+|.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 45678899999999999999999999999997654432 1223444322222111 0 00111
Q ss_pred ------EEEeeeeCC-----eeEEEEeccCCCHHHHHHHh---cCC---CCHHHHHHHHHHHHHHHHHHHhCCccccccC
Q 014544 68 ------IKWYGVDGE-----DNVLVLDLLGPSLEDLFVYC---RRK---FSLKTVLMLADQMIARIEYVHSRGFLHRDIK 130 (423)
Q Consensus 68 ------i~~~~~~~~-----~~~lv~e~~~~sL~~~l~~~---~~~---l~~~~~~~i~~qi~~aL~~LHs~giiHrDLK 130 (423)
...-..... ..+++|+.+.++|.+++... ... +.....+.+..|+++.+++||+.|++|+||+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 111111111 33678888899999887532 111 3344456677999999999999999999999
Q ss_pred CCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCC--------CCCCcchHHHHHHH
Q 014544 131 PDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGI--------EQSRRDDLESLGYV 202 (423)
Q Consensus 131 p~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--------~~s~~sDVwSlGvi 202 (423)
|+|||+ +.+|.++|+||+.......... ....+..|.+||..... .++.+.|.|+||++
T Consensus 173 ~~nfll---~~~G~v~Lg~F~~~~r~g~~~~----------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 173 PENFLL---DQDGGVFLGDFSSLVRAGTRYR----------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp GGGEEE----TTS-EEE--GGGEEETTEEEE----------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred eeeEEE---cCCCCEEEcChHHHeecCceee----------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 999999 5899999999998876543221 12345779999977532 46889999999999
Q ss_pred HHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCC
Q 014544 203 LLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQR 263 (423)
Q Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 263 (423)
+|.|++|..||........... .-..|..+|+.++.||..+|+.||.+|
T Consensus 240 ly~lWC~~lPf~~~~~~~~~~~------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPEADPEW------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGGSTSGG------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCccccccc------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999999986543321111 223455779999999999999999987
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.89 E-value=2e-23 Score=189.47 Aligned_cols=171 Identities=16% Similarity=0.230 Sum_probs=128.9
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchh-----------HHHHHHHHHHHcCCCCCCeEEE
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-----------LLYEAKVYKILQGGSGIPNIKW 70 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~-----------~~~E~~~l~~l~~~~~i~~i~~ 70 (423)
+.++.++|++.+.||.|+||.||++.. ++..+|||++.......+ +.+|++.+.++.| ++++.+..
T Consensus 26 ~~~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~-~GI~~~~d 102 (232)
T PRK10359 26 DDFLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS-EGLASLND 102 (232)
T ss_pred HHHhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH-CCCCcceE
Confidence 467899999999999999999999765 466799999875432221 4688889999976 56776665
Q ss_pred eeeeC--------CeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 71 YGVDG--------EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 71 ~~~~~--------~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
++... ...+|+|||+ |.+|.++.. ++. ....+++.+|..||+.|++||||||+||+++ .
T Consensus 103 ~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~ 170 (232)
T PRK10359 103 FYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---K 170 (232)
T ss_pred eeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---C
Confidence 54422 3578999999 667877632 333 2456999999999999999999999999995 5
Q ss_pred CCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHH
Q 014544 142 ANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFL 207 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ell 207 (423)
++ ++|+|||........... ........++.++|+||||+++..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 56 999999988655322110 11344455778999999999988765
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=5.5e-23 Score=183.89 Aligned_cols=136 Identities=21% Similarity=0.231 Sum_probs=103.2
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCCC-----------chh-----------------HHHHHHHHHHHcCCC
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK-----------HPQ-----------------LLYEAKVYKILQGGS 63 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~-----------~~~-----------------~~~E~~~l~~l~~~~ 63 (423)
.+.||+|+||.||+|.+. +|+.||||+++.... ... ...|++++..+.+..
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 578999999999999986 899999999865421 111 234999999997632
Q ss_pred CCCeEEEeeeeCCeeEEEEeccCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccccCCCceEEeccCC
Q 014544 64 GIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMIARIEYV-HSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 64 ~i~~i~~~~~~~~~~~lv~e~~~~-sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L-Hs~giiHrDLKp~NILl~~~~~ 141 (423)
++....+.. ...+|||||+++ ++...... ...++...+..++.|++.+|.+| |+.||+||||||+|||++
T Consensus 81 -v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~---- 152 (190)
T cd05147 81 -IPCPEPILL--KSHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH---- 152 (190)
T ss_pred -CCCCcEEEe--cCCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----
Confidence 222222221 234899999954 44333222 45799999999999999999999 799999999999999994
Q ss_pred CCeEEEeeccceeec
Q 014544 142 ANQVYIIDFGLAKKY 156 (423)
Q Consensus 142 ~~~vkL~DFGla~~~ 156 (423)
.+.++|+|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 478999999999654
No 415
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=7.8e-22 Score=208.25 Aligned_cols=255 Identities=22% Similarity=0.290 Sum_probs=185.1
Q ss_pred cccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEE
Q 014544 4 IIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 4 ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv 81 (423)
+-+..|.|.+.||+|+||.||+|...+ ++.||||+.+.....+- .-=.+++.+|+ -.+.+-.+..+....+.-+||
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEf-YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEF-YICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceee-eehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 347789999999999999999999877 99999999887654331 11122233333 112233334444456777999
Q ss_pred Eecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEecc----CCCCeEEEeeccceeec
Q 014544 82 LDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLG----RKANQVYIIDFGLAKKY 156 (423)
Q Consensus 82 ~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~----~~~~~vkL~DFGla~~~ 156 (423)
+||. .|+|.+++. ..+.+++..++.+..||+.-+++||..+|||+||||+|+||... .+...++|+|||.+-.+
T Consensus 773 ~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm 851 (974)
T KOG1166|consen 773 SEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDM 851 (974)
T ss_pred eeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceee
Confidence 9999 999999998 46679999999999999999999999999999999999999632 23457999999998654
Q ss_pred cCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCc
Q 014544 157 RDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
.--... ......++|-.+-.+|+..|.+++..+|.|.|+.+++-||.|++-= ...+.....
T Consensus 852 ~lfp~~-----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q--------------~~~g~~~~~ 912 (974)
T KOG1166|consen 852 KLFPDG-----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME--------------VKNGSSWMV 912 (974)
T ss_pred eEcCCC-----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH--------------hcCCcceec
Confidence 322221 1234678899999999999999999999999999999999985421 101100000
Q ss_pred hHHhhccC-hHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 237 IEVLCKSH-PAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 237 ~~~~~~~~-~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
...+.+.+ -+-+.+|+..+|+.|-..=|...+|...|+.++.+.
T Consensus 913 ~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 913 KTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred cccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 00000000 134678888899866566688899999888887654
No 416
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.88 E-value=4.3e-23 Score=214.18 Aligned_cols=248 Identities=18% Similarity=0.146 Sum_probs=173.2
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC------chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK------HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
+|...+.||++.|=.|.+|++.+ |. |+||++-+... ..+.+.|++ ....++ +++..+...-......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~-pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-GL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKA-PNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-ce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcC-CcccchHHHHHhhHHHHHH
Confidence 78899999999999999998754 44 99998765442 223444555 333344 4444443344455667889
Q ss_pred EeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCC
Q 014544 82 LDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTT 161 (423)
Q Consensus 82 ~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (423)
-+|...+|.|.+.. +.-+..-+...|+.||+.||..+|..||+|||||.+||||+ ..+=+.|+||..-+...-+..
T Consensus 100 RqyvkhnLyDRlST-RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT---SWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 100 RQYVKHNLYDRLST-RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT---SWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHhhhhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe---eechhhhhcccccCCccCCCC
Confidence 99999999998863 34477888999999999999999999999999999999996 788899999987765432222
Q ss_pred CCc-ccccCCCCcccccCccccchhcCC----------C-CCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHH
Q 014544 162 NRH-IPYRENKNLTGTARYASCNTHLGI----------E-QSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKI 228 (423)
Q Consensus 162 ~~~-~~~~~~~~~~gt~~Y~aPE~~~~~----------~-~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i 228 (423)
+.. ..|. ..+...-..|.|||.+... . .+++-||||+||+++||++ |.+||.-. +.+ ..
T Consensus 176 NPadf~fF-FDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS------QL~-aY 247 (1431)
T KOG1240|consen 176 NPADFTFF-FDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS------QLL-AY 247 (1431)
T ss_pred CcccceEE-EecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH------HHH-hH
Confidence 211 1111 1112223579999988642 1 4678899999999999998 78888531 111 11
Q ss_pred HhhccCCchHHhhcc-ChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 229 CEKKVSTPIEVLCKS-HPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 229 ~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
.... ....+..... -...++.+|..|++.||++|.++++.++.
T Consensus 248 r~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 248 RSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111 1111221111 24579999999999999999999988775
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.88 E-value=9.8e-22 Score=176.11 Aligned_cols=138 Identities=22% Similarity=0.251 Sum_probs=105.4
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----------------------------hhHHHHHHHHHHHcCC
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----------------------------PQLLYEAKVYKILQGG 62 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----------------------------~~~~~E~~~l~~l~~~ 62 (423)
+.+.||+|+||.||+|.+. +|+.||||+++..... ..+..|.+.+..+.+.
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999987754210 1135788889888864
Q ss_pred CCCCeEEEeeeeCCeeEEEEeccCCC-HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccC
Q 014544 63 SGIPNIKWYGVDGEDNVLVLDLLGPS-LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGR 140 (423)
Q Consensus 63 ~~i~~i~~~~~~~~~~~lv~e~~~~s-L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~ 140 (423)
. ++....+... ..+|||||++|. +..... ....++...+..++.|++.+|.+||+ +||+||||||+|||++
T Consensus 80 ~-i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l-~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--- 152 (190)
T cd05145 80 G-VPVPEPILLK--KNVLVMEFIGDDGSPAPRL-KDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--- 152 (190)
T ss_pred C-CCCceEEEec--CCEEEEEEecCCCchhhhh-hhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE---
Confidence 3 3322222222 348999999543 433222 23568889999999999999999999 9999999999999993
Q ss_pred CCCeEEEeeccceeecc
Q 014544 141 KANQVYIIDFGLAKKYR 157 (423)
Q Consensus 141 ~~~~vkL~DFGla~~~~ 157 (423)
++.++|+|||+|....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 6889999999997654
No 418
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-23 Score=207.82 Aligned_cols=224 Identities=22% Similarity=0.325 Sum_probs=184.2
Q ss_pred eeeecCceeEEEEEEc---CCCceEEEEEecCCCCc----hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 14 KIGSGSFGEIFLASHV---DTNEIVAVKIENSGTKH----PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~---~~~~~vaiKi~~~~~~~----~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
.+|+|.||.|++++-. +.+..+|+|+.++.... .....|..++...+.++.+..+...+......++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 3789999999987632 45677999987654322 235567888888887888888888888899999999999
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHI 165 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~ 165 (423)
++.|...+.. ...+.+.....+...++-|++++|+.+|+|||+|++||++ +..|.+++.|||+++.......
T Consensus 81 gg~lft~l~~-~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~---- 152 (612)
T KOG0603|consen 81 GGDLFTRLSK-EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKI---- 152 (612)
T ss_pred cchhhhcccc-CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhh----
Confidence 6677766553 4568888889999999999999999999999999999999 6899999999999987655432
Q ss_pred cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccCh
Q 014544 166 PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHP 245 (423)
Q Consensus 166 ~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 245 (423)
.+||..|||||++. ....++|.||||++++||+||..||.+ +....|.......|... .
T Consensus 153 -------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------~~~~~Il~~~~~~p~~l-----~ 211 (612)
T KOG0603|consen 153 -------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------DTMKRILKAELEMPREL-----S 211 (612)
T ss_pred -------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------HHHHHHhhhccCCchhh-----h
Confidence 28999999999999 467889999999999999999999987 34455666566666443 6
Q ss_pred HHHHHHHHHHHcCCCCCCCCh
Q 014544 246 AEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 246 ~~l~~li~~cl~~dP~~RPt~ 266 (423)
...++++..++..+|..|-..
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 789999999999999999754
No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.87 E-value=1.7e-22 Score=209.59 Aligned_cols=215 Identities=24% Similarity=0.407 Sum_probs=156.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
...|..++.|..|+||.||.++++.+.+.+|+|+-+..- +.+. ++. + .+..+.|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~l----ilRn--ilt-~---------------a~npfvv---- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL----ILRN--ILT-F---------------AGNPFVV---- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcccccch----hhhc--ccc-c---------------cCCccee----
Confidence 467999999999999999999999999999997533211 1111 111 1 1111222
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCC---
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTN--- 162 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~--- 162 (423)
|+-..+++. -+.++. +++.+++|||+.||+|||+||+|.+|+ .-|++||+|||+++........
T Consensus 136 -gDc~tllk~-~g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 136 -GDCATLLKN-IGPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred -chhhhhccc-CCCCcc--------hhhHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhh
Confidence 444444432 223433 238899999999999999999999995 8899999999998764322111
Q ss_pred -Ccc----cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch
Q 014544 163 -RHI----PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 163 -~~~----~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
.++ .-...+..+||+.|.|||++..+.|+..+|+|++|+|+||++.|..||.+.+.. +.+..++......+.
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe---elfg~visd~i~wpE 279 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISDDIEWPE 279 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH---HHHhhhhhhhccccc
Confidence 011 011245679999999999999999999999999999999999999999986544 455555555554443
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCC
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRP 264 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RP 264 (423)
. ...++++.++++.++|..+|..|-
T Consensus 280 ~--dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 280 E--DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred c--CcCCCHHHHHHHHHHHHhChHhhc
Confidence 3 345689999999999999999995
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=8.1e-22 Score=175.48 Aligned_cols=191 Identities=16% Similarity=0.111 Sum_probs=138.9
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCch------hHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHP------QLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~------~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+.+...|++|+||+||.+.. .+..++.+.+....... .+.+|+++|+.|.+++++|.+..+ +..+++|
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm 77 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR 77 (218)
T ss_pred cccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence 34678899999999998865 57778877665544321 367899999999988889988665 3469999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccccc-CCCceEEeccCCCCeEEEeeccceeeccCCC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDI-KPDNFLMGLGRKANQVYIIDFGLAKKYRDPT 160 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDL-Kp~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (423)
+|+ |.+|...... ....++.|++.+|.++|++||+|||| ||+|||++ .++.++|+|||+|.......
T Consensus 78 eyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 78 SYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred eeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCCceecCCcc
Confidence 998 6666543211 12457889999999999999999999 79999994 67889999999998544322
Q ss_pred CC------CcccccCCCCcccccCccccchhcCC-CCC-CcchHHHHHHHHHHHHhCCCCCCCc
Q 014544 161 TN------RHIPYRENKNLTGTARYASCNTHLGI-EQS-RRDDLESLGYVLLYFLRGSLPWQGL 216 (423)
Q Consensus 161 ~~------~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~s-~~sDVwSlGvil~elltG~~Pf~~~ 216 (423)
.. ..+..-.......++.|++|+...-. ..+ .+.++++.|+-+|.++|+..|+.+.
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 10 00000000012357788888876533 233 5679999999999999999998653
No 421
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=2e-21 Score=182.62 Aligned_cols=189 Identities=19% Similarity=0.265 Sum_probs=139.9
Q ss_pred CeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC-CCeEEEeecccee
Q 014544 76 EDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK-ANQVYIIDFGLAK 154 (423)
Q Consensus 76 ~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~-~~~vkL~DFGla~ 154 (423)
...|+||.-+..+|..++. .+..+......++.|+++|+.|||++||.|||+|.+|||+..+|+ ...++|+|||++-
T Consensus 316 ~tlylvMkrY~~tLr~yl~--~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL 393 (598)
T KOG4158|consen 316 KTLYLVMKRYRQTLREYLW--TRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL 393 (598)
T ss_pred ceEEEehhcchhhHHHHHh--cCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence 3569999999999999986 455788889999999999999999999999999999999976543 3478899999975
Q ss_pred eccCCCCCCcccccCC-CCcccccCccccchhcCCCC------CCcchHHHHHHHHHHHHhCCCCCCCchhhhhH-HHHH
Q 014544 155 KYRDPTTNRHIPYREN-KNLTGTARYASCNTHLGIEQ------SRRDDLESLGYVLLYFLRGSLPWQGLKAATKK-QKYD 226 (423)
Q Consensus 155 ~~~~~~~~~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~------s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~-~~~~ 226 (423)
.-.. .....||... ....|...-||||+....+- -.++|.|+.|.+.||+++...||.+....... ..|.
T Consensus 394 Ad~~--hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq 471 (598)
T KOG4158|consen 394 ADDN--HGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ 471 (598)
T ss_pred eccc--cccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh
Confidence 3222 1122333222 24567888999999875431 24899999999999999999999862211100 0011
Q ss_pred HHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHH
Q 014544 227 KICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHD 275 (423)
Q Consensus 227 ~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 275 (423)
+ ...+.+...+|+.+++++...|+.||.+|++..-....|+=
T Consensus 472 ---e----~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~L 513 (598)
T KOG4158|consen 472 ---E----SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNL 513 (598)
T ss_pred ---h----hhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHHH
Confidence 1 11233445669999999999999999999988765555543
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.85 E-value=8e-22 Score=176.91 Aligned_cols=243 Identities=12% Similarity=0.150 Sum_probs=180.7
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
...+.-+|.+...|+.|+|+|. |..++.|+++-.. ....|..|.-.|+.+.|++..+.+..+. ......++..
T Consensus 191 ~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn-sppnlv~isq 267 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN-SPPNLVIISQ 267 (448)
T ss_pred hhhhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-CCCCceEeee
Confidence 4456778899999999999995 4457788776433 2345788888899998877777665554 4467788889
Q ss_pred cc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCCCceEEeccCCCCeEEE--eeccceeecc
Q 014544 84 LL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYI--IDFGLAKKYR 157 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LHs~g--iiHrDLKp~NILl~~~~~~~~vkL--~DFGla~~~~ 157 (423)
|+ .++|..++..... -.+..++.+++.+|+.|++|||+.. |.---|....+++ |++.+.+| +|--++..
T Consensus 268 ~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmi---dedltarismad~kfsfq-- 342 (448)
T KOG0195|consen 268 YMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMI---DEDLTARISMADTKFSFQ-- 342 (448)
T ss_pred eccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEe---cchhhhheecccceeeee--
Confidence 98 8999999875332 2677899999999999999999974 4445688899999 45555544 44333211
Q ss_pred CCCCCCcccccCCCCcccccCccccchhcCCCCC---CcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccC
Q 014544 158 DPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS---RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVS 234 (423)
Q Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s---~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~ 234 (423)
.....-.+.||+||.+...+.+ +++|+|||++++|||.|...||.+..+.+-.-+ +.-..+.
T Consensus 343 ------------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk---ialeglr 407 (448)
T KOG0195|consen 343 ------------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK---IALEGLR 407 (448)
T ss_pred ------------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh---hhhcccc
Confidence 0122347899999999877643 578999999999999999999998776543322 2222222
Q ss_pred CchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHH
Q 014544 235 TPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDL 276 (423)
Q Consensus 235 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 276 (423)
. .++++++..+..||.-|+..||.+||.|+.|+-.|++.
T Consensus 408 v---~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 408 V---HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred c---cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 2 23356688999999999999999999999999988865
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.82 E-value=5e-20 Score=170.37 Aligned_cols=140 Identities=21% Similarity=0.259 Sum_probs=107.9
Q ss_pred ceEEeceeeecCceeEEEEE-EcCCCceEEEEEecCCCC--------------------------chhHHHHHHHHHHHc
Q 014544 8 KYKLGRKIGSGSFGEIFLAS-HVDTNEIVAVKIENSGTK--------------------------HPQLLYEAKVYKILQ 60 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~-~~~~~~~vaiKi~~~~~~--------------------------~~~~~~E~~~l~~l~ 60 (423)
-|.+.+.||+|+||.||+|. +..+|+.||||++..... ...+.+|+.++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999998 667899999998764321 012468999999997
Q ss_pred CC-CCCCeEEEeeeeCCeeEEEEeccCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccccCCCceEEe
Q 014544 61 GG-SGIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG-FLHRDIKPDNFLMG 137 (423)
Q Consensus 61 ~~-~~i~~i~~~~~~~~~~~lv~e~~~~-sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~g-iiHrDLKp~NILl~ 137 (423)
+. ..++.+..+ ...++||||+++ +|...... ...+....+..++.||+.+|.+||++| |+||||||+||+++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~ 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc-cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence 52 223333322 235899999955 55544322 344666778899999999999999999 99999999999993
Q ss_pred ccCCCCeEEEeeccceeec
Q 014544 138 LGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 138 ~~~~~~~vkL~DFGla~~~ 156 (423)
.+.++|+|||.|...
T Consensus 184 ----~~~i~LiDFg~a~~~ 198 (237)
T smart00090 184 ----DGKVVIIDVSQSVEL 198 (237)
T ss_pred ----CCCEEEEEChhhhcc
Confidence 678999999998653
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=5.1e-18 Score=154.39 Aligned_cols=131 Identities=25% Similarity=0.410 Sum_probs=104.6
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC----------chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----------HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
+.||+|++|.||+|.+ .+..|++|+...... ...+.+|+.++..+.+. +++....++.+....+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~-~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKA-GVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCeEEEEeCCCCEEEE
Confidence 6799999999999987 677799997654321 12367899999998764 3444444445667789999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
||+ |++|.+++.... . ....++.+++.+|.+||+.|++|||++|.|||++ .+.++|+|||++..
T Consensus 79 e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~ 143 (211)
T PRK14879 79 EYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF 143 (211)
T ss_pred EEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence 999 789998876422 2 8889999999999999999999999999999993 67899999998753
No 425
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=3.3e-19 Score=176.94 Aligned_cols=213 Identities=16% Similarity=0.229 Sum_probs=161.5
Q ss_pred HHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccccCCCceE
Q 014544 58 ILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF-LHRDIKPDNFL 135 (423)
Q Consensus 58 ~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~gi-iHrDLKp~NIL 135 (423)
.+.| .++..+.+...++...++|.+|| .|+|.|.+.....++++.-...++++|+.||.|||.-.| .|+.|++.|++
T Consensus 3 ~l~h-~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nCl 81 (484)
T KOG1023|consen 3 QLDH-DNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCL 81 (484)
T ss_pred ccch-hhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccce
Confidence 3444 55666777777788999999999 999999998767778999999999999999999998765 99999999999
Q ss_pred EeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCC-------CCCcchHHHHHHHHHHHHh
Q 014544 136 MGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIE-------QSRRDDLESLGYVLLYFLR 208 (423)
Q Consensus 136 l~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-------~s~~sDVwSlGvil~ellt 208 (423)
+ |....+||+|||+......... +.......-..-|.|||.+.+.. .+.+.||||||++++|+++
T Consensus 82 v---d~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 82 V---DSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred e---eeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 9 6899999999999877643110 00111223456799999998752 3567999999999999999
Q ss_pred CCCCCCCchhhh-hHHHHHHHHhhcc---CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhc
Q 014544 209 GSLPWQGLKAAT-KKQKYDKICEKKV---STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSRE 280 (423)
Q Consensus 209 G~~Pf~~~~~~~-~~~~~~~i~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 280 (423)
.+.||....... ..+.+..+..... .+.+... ...++++..++..||..+|++||+++.+...++.+....
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~ 228 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELL-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGG 228 (484)
T ss_pred ccCccccccccCChHHHHHHHHhcCCCCcCcchhhh-hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccc
Confidence 999998633221 1233333333111 1122211 255778999999999999999999999999998887653
No 426
>PRK10345 hypothetical protein; Provisional
Probab=99.79 E-value=1.6e-18 Score=156.76 Aligned_cols=136 Identities=17% Similarity=0.185 Sum_probs=102.0
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCC--CCchhHHHHHHHHHHHcC----CCCCCeEEEeeeeCC---e-eEE
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--TKHPQLLYEAKVYKILQG----GSGIPNIKWYGVDGE---D-NVL 80 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~--~~~~~~~~E~~~l~~l~~----~~~i~~i~~~~~~~~---~-~~l 80 (423)
-.+.||+|+||.||. +..+... +||+.... .....+.+|+.+++.+.| +++|+.++.+..+.. . +.+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 357899999999995 6666665 69987643 234568999999999953 566777766655442 3 337
Q ss_pred EEeccC---CCHHHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHhCCccccccCCCceEEeccC-CCCeEEEeeccce
Q 014544 81 VLDLLG---PSLEDLFVYCRRKFSLKTVLMLADQMIARI-EYVHSRGFLHRDIKPDNFLMGLGR-KANQVYIIDFGLA 153 (423)
Q Consensus 81 v~e~~~---~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL-~~LHs~giiHrDLKp~NILl~~~~-~~~~vkL~DFGla 153 (423)
||||+| ++|.+++.. ..+++. ..++.|++.++ +|||+++|+||||||+|||++..+ ....++|+||+.+
T Consensus 83 I~e~~G~~~~tL~~~l~~--~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQ--CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EecCCCCcchhHHHHHHc--ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 899964 899999964 346655 35678888888 999999999999999999996432 3458999995544
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=5.1e-18 Score=152.99 Aligned_cols=127 Identities=21% Similarity=0.360 Sum_probs=99.8
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEecCCCC----------chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTK----------HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~----------~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
.||+|+||.||+|.+ ++..|++|+...... ...+.+|++++..+.+.. ++....++......+++||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG-VNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC-CCCCEEEEEECCCCEEEEE
Confidence 489999999999985 567899997543221 134568999999998643 3333444556667799999
Q ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 84 LL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 84 ~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
|+ |++|.+++.... ..++.|++.+|.+||+.|++|+|++|.||+++ .+.++|+|||++..
T Consensus 78 ~~~g~~l~~~~~~~~--------~~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN--------DELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKY 138 (199)
T ss_pred EECCccHHHHHhhcH--------HHHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcC
Confidence 99 888888765311 07899999999999999999999999999993 68899999999864
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.76 E-value=3.3e-19 Score=174.01 Aligned_cols=174 Identities=25% Similarity=0.326 Sum_probs=130.2
Q ss_pred CeeEEEEecc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYC--RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
.+.||.|++| ..+|.+++... ....+....+.++.|++.|++| +|.+|||+||.||++. .+..+||.|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhh
Confidence 3578999999 88999998632 2347788999999999999999 9999999999999995 566899999999
Q ss_pred eeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCchhhhhHHHHHHHHhh
Q 014544 153 AKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLR-GSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 153 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
........+.. -++.......||..||+||.+.+..|+.++||||||++|+||+. -..+|.. ...+..+...
T Consensus 403 ~ts~~~~~~~~-~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er------~~t~~d~r~g 475 (516)
T KOG1033|consen 403 VTSQDKDETVA-PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER------IATLTDIRDG 475 (516)
T ss_pred eeecccCCccc-chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH------HHhhhhhhcC
Confidence 88766544111 11233446789999999999999999999999999999999997 3333322 1222222222
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCCh
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDY 266 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 266 (423)
.++ | .....+| +-..|+.+++...|.+||++
T Consensus 476 ~ip-~--~~~~d~p-~e~~ll~~lls~~p~~RP~~ 506 (516)
T KOG1033|consen 476 IIP-P--EFLQDYP-EEYTLLQQLLSPSPEERPSA 506 (516)
T ss_pred CCC-h--HHhhcCc-HHHHHHHHhcCCCcccCchH
Confidence 222 1 1122333 45689999999999999943
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.76 E-value=8.4e-18 Score=151.64 Aligned_cols=136 Identities=23% Similarity=0.315 Sum_probs=103.8
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC------------------------chhHHHHHHHHHHHcCCC
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK------------------------HPQLLYEAKVYKILQGGS 63 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~------------------------~~~~~~E~~~l~~l~~~~ 63 (423)
.|.+.+.||+|+||.||+|... +++.||||++..... ......|..++..+.+..
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 4889999999999999999874 789999998654320 112567888888887642
Q ss_pred -CCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 64 -GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 64 -~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
.++.... ....+++|||+ +++|..+.. ......++.+++.++.++|+.||+||||||+||++ +.
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~-------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~ 160 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRV-------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DD 160 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhccc-------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cC
Confidence 2332222 24558999999 666665432 13467788999999999999999999999999999 46
Q ss_pred CCeEEEeeccceeeccC
Q 014544 142 ANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 142 ~~~vkL~DFGla~~~~~ 158 (423)
++.++|+|||++.....
T Consensus 161 ~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 161 DEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCcEEEEECCccccCCC
Confidence 88999999999965543
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=3.4e-17 Score=169.52 Aligned_cols=133 Identities=23% Similarity=0.394 Sum_probs=103.5
Q ss_pred CceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC--C--------CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 7 VKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG--T--------KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 7 ~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~--~--------~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
..|...+.||+|+||+||+|.+... .+++|+.... . ....+.+|++++..++++. ++....+.....
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-i~~p~~~~~~~~ 409 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAG-VPTPVIYDVDPE 409 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccC-CCeeEEEEEeCC
Confidence 3456678999999999999987543 3444432111 1 1134778999999998744 555555666667
Q ss_pred eeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 77 DNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 77 ~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..++||||+ +++|.+++. ....++.|++.+|.+||+.|++||||||+|||+ +++.++|+|||+++.
T Consensus 410 ~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl----~~~~~~liDFGla~~ 476 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV----RDDRLYLIDFGLGKY 476 (535)
T ss_pred CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE----ECCcEEEEeCccccc
Confidence 789999999 889988775 356789999999999999999999999999999 367899999999864
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.70 E-value=1.6e-16 Score=141.64 Aligned_cols=136 Identities=26% Similarity=0.360 Sum_probs=96.0
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc----hh----------------------HHHHHHHHHHHcCC-C
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH----PQ----------------------LLYEAKVYKILQGG-S 63 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~----~~----------------------~~~E~~~l~~l~~~-~ 63 (423)
+.+.||+|+||.||+|.+. +++.||||++...... .. ...|...+..+.+. .
T Consensus 1 ~~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 1 VGGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CCcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 3578999999999999976 7889999987653211 00 13566666666543 2
Q ss_pred CCCeEEEeeeeCCeeEEEEeccCC-CHH-HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccC
Q 014544 64 GIPNIKWYGVDGEDNVLVLDLLGP-SLE-DLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGR 140 (423)
Q Consensus 64 ~i~~i~~~~~~~~~~~lv~e~~~~-sL~-~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~ 140 (423)
.++....+ ...+++|||+.+ .+. ..+.... .. ..+..++.+++.++.++|. .||+||||||+||+++
T Consensus 80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--- 149 (187)
T cd05119 80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--- 149 (187)
T ss_pred CCCceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE---
Confidence 23333322 246899999944 221 1111111 11 6788999999999999999 9999999999999993
Q ss_pred CCCeEEEeeccceeeccC
Q 014544 141 KANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 141 ~~~~vkL~DFGla~~~~~ 158 (423)
++.++|+|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 78899999999976543
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=1e-15 Score=130.44 Aligned_cols=132 Identities=20% Similarity=0.276 Sum_probs=107.2
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC-CCCCeEEEeeeeCCeeEEEEeccC-CC
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG-SGIPNIKWYGVDGEDNVLVLDLLG-PS 88 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~-~~i~~i~~~~~~~~~~~lv~e~~~-~s 88 (423)
+.+.||.|.++.||++.... ..+++|+.........+..|+.++..+.+. ..++.+..+....+..+++|||+. ..
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 46789999999999999743 679999876654445789999999999876 566777666666678999999994 44
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR---GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~---giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
+..+ +......++.+++.+|.+||.. +++|+||+|+|||++ ..+.++|+|||.++.
T Consensus 80 ~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~ 138 (155)
T cd05120 80 LDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY 138 (155)
T ss_pred cccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence 4432 5566778899999999999985 799999999999995 568999999998753
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=4.2e-15 Score=137.76 Aligned_cols=132 Identities=16% Similarity=0.219 Sum_probs=95.9
Q ss_pred ceee-ecCceeEEEEEEcCCCceEEEEEecCCC---------------CchhHHHHHHHHHHHcCCCC-CCeEEEeee-e
Q 014544 13 RKIG-SGSFGEIFLASHVDTNEIVAVKIENSGT---------------KHPQLLYEAKVYKILQGGSG-IPNIKWYGV-D 74 (423)
Q Consensus 13 ~~Lg-~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---------------~~~~~~~E~~~l~~l~~~~~-i~~i~~~~~-~ 74 (423)
..|| .|+.|+||.+.. .+..++||.+.... ....+.+|++++..|.+... +|....+.. .
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 888899999876 36779999764321 12347889999999986432 344433322 2
Q ss_pred CCe---eEEEEeccC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEee
Q 014544 75 GED---NVLVLDLLG--PSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 75 ~~~---~~lv~e~~~--~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
... .++|||++. .+|.+++.. ..++... +.||+.+|.+||++||+||||||+|||++ .++.++|+|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~--~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~---~~~~v~LID 185 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQE--APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD---PDGKFWLID 185 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhc--CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc---CCCCEEEEE
Confidence 222 359999994 588888753 3455443 57899999999999999999999999994 567899999
Q ss_pred ccceee
Q 014544 150 FGLAKK 155 (423)
Q Consensus 150 FGla~~ 155 (423)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998854
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=1.3e-17 Score=172.70 Aligned_cols=255 Identities=26% Similarity=0.296 Sum_probs=188.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcC-CCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~-~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
...|.+.+.||+|+|+.|-.+.... ....+|+|.+.... .......|..+-..+..|.++..+.......+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3578999999999999999887643 34456777554432 112234466666667655666666666667888999
Q ss_pred EEecc-CCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH-hCCccccccCCCceEEeccCCCC-eEEEeeccceeec
Q 014544 81 VLDLL-GPSLEDLFVYCRR-KFSLKTVLMLADQMIARIEYVH-SRGFLHRDIKPDNFLMGLGRKAN-QVYIIDFGLAKKY 156 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH-s~giiHrDLKp~NILl~~~~~~~-~vkL~DFGla~~~ 156 (423)
+++|. ++++.+.+..... ..+...+..++.|+..+|.|+| ..++.||||||+|.+++ ..+ .+++.|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---ESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---cCCCcccCCCchhhccc
Confidence 99998 8888877732222 5778889999999999999999 99999999999999994 556 8999999999988
Q ss_pred cC-CCCCCcccccCCCCccc-ccCccccchhcCCC-CCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhcc
Q 014544 157 RD-PTTNRHIPYRENKNLTG-TARYASCNTHLGIE-QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKV 233 (423)
Q Consensus 157 ~~-~~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~~~-~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~ 233 (423)
.. ..... .....+| ++.|+|||.+.+.. .....|+||.|+++.-+++|..||....... ..+......+.
T Consensus 176 ~~~~g~~~-----~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~--~~~~~~~~~~~ 248 (601)
T KOG0590|consen 176 RNKNGAER-----SLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD--GRYSSWKSNKG 248 (601)
T ss_pred cccCCcce-----eeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc--ccceeeccccc
Confidence 76 33222 2234567 99999999999854 5788999999999999999999997644322 22222222221
Q ss_pred CCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 234 STPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 234 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
......+..+.....+++.+++..+|+.|.+.+++..
T Consensus 249 -~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 249 -RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred -ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 1112234566788999999999999999999888743
No 435
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=2.1e-15 Score=150.14 Aligned_cols=254 Identities=18% Similarity=0.151 Sum_probs=188.9
Q ss_pred ccCceEEeceeee--cCceeEEEEEE--cCCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC
Q 014544 5 IGVKYKLGRKIGS--GSFGEIFLASH--VDTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE 76 (423)
Q Consensus 5 i~~~y~i~~~Lg~--G~fg~Vy~a~~--~~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~ 76 (423)
+...+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+... ....-.+|+....++..+.+...........+
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~ 191 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG 191 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC
Confidence 4556778889999 99999999998 7888899999633221 22234566666666665555544444455778
Q ss_pred eeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHH----HHHHHHhCCccccccCCCceEEeccCCC-CeEEEeecc
Q 014544 77 DNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIA----RIEYVHSRGFLHRDIKPDNFLMGLGRKA-NQVYIIDFG 151 (423)
Q Consensus 77 ~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~----aL~~LHs~giiHrDLKp~NILl~~~~~~-~~vkL~DFG 151 (423)
..++-+|+|+.+|.++......-++...++.++.+... ||.++|+.+++|-|+||+||++. .+ ...+++|||
T Consensus 192 ~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~---~~~~s~~~~df~ 268 (524)
T KOG0601|consen 192 ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT---SDWTSCKLTDFG 268 (524)
T ss_pred cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc---cccceeecCCcc
Confidence 89999999999999888765556889999999999999 99999999999999999999995 45 789999999
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCchhhhhHHHHHHHHhh
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEK 231 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~ 231 (423)
+...+.+...... +.......|...|++||...+ -++..+|||+||.++.+..++..++....... ...+ .
T Consensus 269 ~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~----r- 339 (524)
T KOG0601|consen 269 LVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQL----R- 339 (524)
T ss_pred eeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-cccc----c-
Confidence 9998877653322 111223467889999999887 47889999999999999999877665421110 0111 1
Q ss_pred ccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 232 KVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 232 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
... ...++|......+...+..|+..+|-.|+++..+..
T Consensus 340 ~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 340 QGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 111 224455666777888999999999999998877654
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.55 E-value=4.2e-13 Score=134.96 Aligned_cols=138 Identities=23% Similarity=0.361 Sum_probs=96.1
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCCc------------------------------------------hhHH
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH------------------------------------------PQLL 50 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~------------------------------------------~~~~ 50 (423)
+.||.|++|.||+|+.+ +|+.||||+.+..-.. -.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 57999999999999865 6889999987543100 0134
Q ss_pred HHHHHHHHHc----CCCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHH-HHHHHHhCCc
Q 014544 51 YEAKVYKILQ----GGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIA-RIEYVHSRGF 124 (423)
Q Consensus 51 ~E~~~l~~l~----~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~-aL~~LHs~gi 124 (423)
+|++.+..+. +.+.+..-..|.......+|||||+ |.+|.++.......+. ...++.+++. .+..+|..|+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~ 278 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGF 278 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCc
Confidence 4555555554 2233322233333345679999999 7788777653222232 3456666666 4788999999
Q ss_pred cccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 125 LHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 125 iHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
+|+|++|.||++ +.++.++|+|||++..+.
T Consensus 279 ~H~D~hPgNilv---~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 279 FHADLHPGNIFV---LKDGKIIALDFGIVGRLS 308 (437)
T ss_pred eeCCCCcccEEE---CCCCcEEEEeCCCeeECC
Confidence 999999999999 477899999999987653
No 437
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.50 E-value=3.4e-13 Score=120.07 Aligned_cols=136 Identities=16% Similarity=0.207 Sum_probs=99.2
Q ss_pred eceeeecCceeEEEEEEcC------CCceEEEEEecCCC--------------C----------chhH----HHHHHHHH
Q 014544 12 GRKIGSGSFGEIFLASHVD------TNEIVAVKIENSGT--------------K----------HPQL----LYEAKVYK 57 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~------~~~~vaiKi~~~~~--------------~----------~~~~----~~E~~~l~ 57 (423)
...||.|--+.||.|.... .+..+|||+.+... . ...+ .+|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999998643 24789999744211 0 0112 38999999
Q ss_pred HHcCC-CCCCeEEEeeeeCCeeEEEEeccCCC-HHH-HHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccccCCCc
Q 014544 58 ILQGG-SGIPNIKWYGVDGEDNVLVLDLLGPS-LED-LFVYCRRKFSLKTVLMLADQMIARIEYV-HSRGFLHRDIKPDN 133 (423)
Q Consensus 58 ~l~~~-~~i~~i~~~~~~~~~~~lv~e~~~~s-L~~-~l~~~~~~l~~~~~~~i~~qi~~aL~~L-Hs~giiHrDLKp~N 133 (423)
++... -.+|....+ ...+|||||++++ +.. .+. ...++...+..+..|++.+|..| |+.||||+||++.|
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~N 155 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYN 155 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 98753 345555543 5679999999653 211 122 22355667778889999999999 89999999999999
Q ss_pred eEEeccCCCCeEEEeeccceeecc
Q 014544 134 FLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 134 ILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
||+. ++.++|+|||.|....
T Consensus 156 IL~~----~~~v~iIDF~qav~~~ 175 (197)
T cd05146 156 MLWH----DGKVWFIDVSQSVEPT 175 (197)
T ss_pred EEEE----CCcEEEEECCCceeCC
Confidence 9994 5789999999987653
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.49 E-value=2.3e-13 Score=119.16 Aligned_cols=126 Identities=21% Similarity=0.301 Sum_probs=96.2
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCH
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSL 89 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL 89 (423)
.+.|+.|.++.||+++. .++.|++|+..... ....+..|+++++.+.+...+|.+..+. ....++|||++ |.++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 46789999999999986 37789999876543 2345789999999998766677765554 33468999999 5555
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----cccccCCCceEEeccCCCCeEEEeecccee
Q 014544 90 EDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGF-----LHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 90 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~gi-----iHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
.+. . .....++.+++.+|..||+.++ +|+|++|.||+++ .+.++|+|||.+.
T Consensus 79 ~~~------~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE------D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAG 135 (170)
T ss_pred ccc------c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEeccccc
Confidence 432 0 1123456799999999999985 9999999999994 5679999999874
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.49 E-value=4.3e-12 Score=129.44 Aligned_cols=139 Identities=19% Similarity=0.315 Sum_probs=93.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCC------------------------------------c-----
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK------------------------------------H----- 46 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~------------------------------------~----- 46 (423)
.|+. +.||+|++|+||+|+.+++|+.||||+.+..-. .
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ 199 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHD 199 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHH
Confidence 4665 789999999999999988899999999864310 0
Q ss_pred -hhHHHHHHHHHHHc----CCCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCC-----CCHHHHHHHHHHHHHH
Q 014544 47 -PQLLYEAKVYKILQ----GGSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRK-----FSLKTVLMLADQMIAR 115 (423)
Q Consensus 47 -~~~~~E~~~l~~l~----~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~-----l~~~~~~~i~~qi~~a 115 (423)
-.+.+|+..+.++. +.+.+..-..|.......+|||||+ |+.+.++-...... +....+..++.|+
T Consensus 200 ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi--- 276 (537)
T PRK04750 200 ELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV--- 276 (537)
T ss_pred hhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH---
Confidence 12455665555554 2222221233334456789999999 77887653211222 3333344444444
Q ss_pred HHHHHhCCccccccCCCceEEeccCCCC----eEEEeeccceeecc
Q 014544 116 IEYVHSRGFLHRDIKPDNFLMGLGRKAN----QVYIIDFGLAKKYR 157 (423)
Q Consensus 116 L~~LHs~giiHrDLKp~NILl~~~~~~~----~vkL~DFGla~~~~ 157 (423)
...|++|+|+||.||+++ .++ +++++|||++..+.
T Consensus 277 ----f~~GffHaDpHPGNIlv~---~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ----FRDGFFHADMHPGNIFVS---YDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ----HhCCeeeCCCChHHeEEe---cCCCCCCeEEEEecceEEECC
Confidence 468999999999999995 444 99999999987654
No 440
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.43 E-value=1.4e-12 Score=111.98 Aligned_cols=143 Identities=18% Similarity=0.229 Sum_probs=109.8
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEE-ecCCCCc---------hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKI-ENSGTKH---------PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi-~~~~~~~---------~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
....|-+|+-+.|+++.+ .|+.++||. +.+.-.+ .+..+|++++.++... .|+.-..++.+.....|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~-GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRAL-GIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHh-CCCCceEEEEecCCCeE
Confidence 567889999999999987 688888884 2222222 2357899999988753 55555667777888899
Q ss_pred EEeccCC--CHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 81 VLDLLGP--SLEDLFVYCRRK-FSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 81 v~e~~~~--sL~~~l~~~~~~-l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
+|||..| ++.+++...-.. ........++.+|-+.|.-||..+|||+||..+||++..++....+.|+|||++...
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 9999966 888888654333 333334789999999999999999999999999999975555556799999998654
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.43 E-value=1.1e-13 Score=144.80 Aligned_cols=274 Identities=20% Similarity=0.186 Sum_probs=192.6
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCc-----hhHHHHHHHHHHHcCCCCCCeEEEe---eeeCCe
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH-----PQLLYEAKVYKILQGGSGIPNIKWY---GVDGED 77 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~-----~~~~~E~~~l~~l~~~~~i~~i~~~---~~~~~~ 77 (423)
-..+.+.+-+-+|.++.++.+.-..++...++|+....... +....+-. +..+++.|.+... ......
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~----~~i~p~~P~v~~~~~s~~~rsP 878 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSN----ILITPRSPAVVRSFPSFPCRSP 878 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccC----ccccCCCCceecccCCCCCCCC
Confidence 45677888899999999999987777766666654332211 11111111 1111223333222 235667
Q ss_pred eEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 78 NVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 78 ~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
.+++++|+ +++|...+.. ....+.+-+......+..+++|||+..++|||++|.|+|.. ..+..++.|||.....
T Consensus 879 ~~L~~~~~~~~~~~Skl~~-~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 879 LPLVGHYLNGGDLPSKLHN-SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPLTDFGTLSKV 954 (1205)
T ss_pred cchhhHHhccCCchhhhhc-CCCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCcccCcccccccc
Confidence 89999999 7788887765 33567777778888899999999999999999999999994 7889999999844321
Q ss_pred cCC---------------------CCCCcc---cccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCC
Q 014544 157 RDP---------------------TTNRHI---PYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP 212 (423)
Q Consensus 157 ~~~---------------------~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~P 212 (423)
... ...... ..+......||+.|.+||...+......+|+|++|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 110 000000 11234567899999999999999999999999999999999999999
Q ss_pred CCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHhcCCCCCcceecee
Q 014544 213 WQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTI 292 (423)
Q Consensus 213 f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~~~~~dw~~ 292 (423)
|..... .+.++.+.......+... ...+.+.++++...+..+|.+|-.+.-- -...+..|....||+.
T Consensus 1035 ~na~tp---q~~f~ni~~~~~~~p~g~--~~~s~~aq~~~~~ll~~~~~qr~~a~~~-------~e~k~~~~~~~~~~~~ 1102 (1205)
T KOG0606|consen 1035 FNAETP---QQIFENILNRDIPWPEGP--EEGSYEAQDLINRLLTEEPTQRLGAKGA-------AEVKGHPFFQDVDWEN 1102 (1205)
T ss_pred CCCcch---hhhhhccccCCCCCCCCc--cccChhhhhhhhhhhccCchhccCcccc-------cccccCCccCCCCccc
Confidence 986543 355566666655554322 3457889999999999999999876421 1236778888889988
Q ss_pred cccchhh
Q 014544 293 LKYQQTQ 299 (423)
Q Consensus 293 ~~~~~~~ 299 (423)
+..+...
T Consensus 1103 l~~q~~~ 1109 (1205)
T KOG0606|consen 1103 LALQKAE 1109 (1205)
T ss_pred cccccCc
Confidence 7654433
No 442
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.39 E-value=6.8e-12 Score=108.34 Aligned_cols=128 Identities=24% Similarity=0.415 Sum_probs=97.3
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEe-cCCCCch---------hHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEE
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIE-NSGTKHP---------QLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~-~~~~~~~---------~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~ 82 (423)
..+++|+-+.||.+.+ -+..+++|.- .+.-..+ ...+|++++.++.. ..++.-..|..+.....|+|
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~-~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKARE-AGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCeEEEEcCCCCEEEE
Confidence 4578999999999977 3445788842 2222222 35789999999876 46766677788888899999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
||. |..|.+.+... ...++..+-.-+.-||..||+|+||.++||+++ .+.+.++|||++..
T Consensus 79 e~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~ 140 (204)
T COG3642 79 EYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEF 140 (204)
T ss_pred EEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCcccc
Confidence 999 55566676542 255667777778899999999999999999994 55699999999863
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=2e-12 Score=128.97 Aligned_cols=241 Identities=19% Similarity=0.134 Sum_probs=165.8
Q ss_pred cCceEEeceeeecCceeEEEEEEc-CCCceEEEEEecCCC----CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEE
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHV-DTNEIVAVKIENSGT----KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~-~~~~~vaiKi~~~~~----~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~l 80 (423)
-.+|.++..||.|.|+.|+.+... .++..|++|-..... ....-..|+-+...+..+.+++....-.......|+
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i 343 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI 343 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence 467889999999999999998765 677889999544332 111235677666777655555543222223345568
Q ss_pred EEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCC
Q 014544 81 VLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDP 159 (423)
Q Consensus 81 v~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (423)
-.||| ++++.... .....+.+...+.+..|++.++.++|++.++|+|+||+||++.. +.+..++.|||.+..+.-.
T Consensus 344 p~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~--~~~~~~~~~~~~~t~~~~~ 420 (524)
T KOG0601|consen 344 PLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISN--DGFFSKLGDFGCWTRLAFS 420 (524)
T ss_pred chhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeecc--chhhhhcccccccccccee
Confidence 89999 55554443 34456888999999999999999999999999999999999952 2278899999998653221
Q ss_pred CCCCcccccCCCCcccccCcc--ccchhcCCCCCCcchHHHHHHHHHHHHhCCC-CCCCchhhhhHHHHHHHHhhccCCc
Q 014544 160 TTNRHIPYRENKNLTGTARYA--SCNTHLGIEQSRRDDLESLGYVLLYFLRGSL-PWQGLKAATKKQKYDKICEKKVSTP 236 (423)
Q Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~--aPE~~~~~~~s~~sDVwSlGvil~elltG~~-Pf~~~~~~~~~~~~~~i~~~~~~~~ 236 (423)
.. ......++. +++......+..+.|++|||..+.+.+++.. ++.+.. ...+........
T Consensus 421 ~~----------~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-------~~~i~~~~~p~~ 483 (524)
T KOG0601|consen 421 SG----------VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-------SLTIRSGDTPNL 483 (524)
T ss_pred cc----------cccccccccccchhhccccccccccccccccccccccccCcccCccccc-------ceeeecccccCC
Confidence 11 222333444 5666667778999999999999999999853 333211 111222222211
Q ss_pred hHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 237 IEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 237 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.....++..+...+...++..||.+.++..
T Consensus 484 -----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 484 -----PGLKLQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred -----CchHHhhhhhhhhhcCCccccchhhhhhcc
Confidence 122467888888999999999998877644
No 444
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.23 E-value=2.6e-10 Score=109.40 Aligned_cols=258 Identities=14% Similarity=0.210 Sum_probs=163.9
Q ss_pred cCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCe-E-----EEeeeeCCe-e
Q 014544 6 GVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPN-I-----KWYGVDGED-N 78 (423)
Q Consensus 6 ~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~-i-----~~~~~~~~~-~ 78 (423)
+.-...++.||+|+-+.+|-.-... ..+-||........+-.. ...|...-.++.+.. + ..++-+... .
T Consensus 10 ge~i~~gr~LgqGgea~ly~l~e~~---d~VAKIYh~Pppa~~aqk-~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 10 GEPIPPGRPLGQGGEADLYTLGEVR---DQVAKIYHAPPPAAQAQK-VAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CcccCCCccccCCccceeeecchhh---chhheeecCCCchHHHHH-HHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3334567889999999999764322 245687766543322111 111222212122211 1 223333333 6
Q ss_pred EEEEeccCC--CHHHHHHHh--c---CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeecc
Q 014544 79 VLVLDLLGP--SLEDLFVYC--R---RKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFG 151 (423)
Q Consensus 79 ~lv~e~~~~--sL~~~l~~~--~---~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFG 151 (423)
-+.|....| ....++.-. + ..+.|...++.++.++.+.+.||..|.+-+|+.++|||++ +++.|.|.|-.
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEccc
Confidence 678888733 344444311 1 2377899999999999999999999999999999999996 78899999855
Q ss_pred ceeeccCCCCCCcccccCCCCcccccCccccchhc-----CCCCCCcchHHHHHHHHHHHHhC-CCCCCCchhhh----h
Q 014544 152 LAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHL-----GIEQSRRDDLESLGYVLLYFLRG-SLPWQGLKAAT----K 221 (423)
Q Consensus 152 la~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~s~~sDVwSlGvil~elltG-~~Pf~~~~~~~----~ 221 (423)
.-....... .....+|...|.+||.-. +..-+...|.|.||+++++|+.| ++||.+..... .
T Consensus 163 sfqi~~ng~--------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p 234 (637)
T COG4248 163 SFQINANGT--------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNP 234 (637)
T ss_pred ceeeccCCc--------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCc
Confidence 433322211 123568999999999765 44457789999999999999986 99998743211 1
Q ss_pred HH-H-------HH-HHHhhccCCchHHhhccChHHHHHHHHHHHcCC--CCCCCChHHHHHHHHHHHH
Q 014544 222 KQ-K-------YD-KICEKKVSTPIEVLCKSHPAEFASYFHYCQSLT--FDQRPDYGFLKRLFHDLFS 278 (423)
Q Consensus 222 ~~-~-------~~-~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPt~~~l~~~L~~~~~ 278 (423)
.+ . +. +-.......|...-+.-+|+.+..++.+|+... +.-||+++.-+..|..+-.
T Consensus 235 ~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 235 LETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred chhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 11 0 00 001112233333334456899999999999754 5689999887777766543
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.18 E-value=2e-10 Score=104.76 Aligned_cols=138 Identities=20% Similarity=0.319 Sum_probs=99.5
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCC---CchhHHHHHHHHHHHcCCC-CCCeEEEeeeeC---CeeEEEEecc
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGT---KHPQLLYEAKVYKILQGGS-GIPNIKWYGVDG---EDNVLVLDLL 85 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~-~i~~i~~~~~~~---~~~~lv~e~~ 85 (423)
+.|+.|.++.||++...+ |+.+++|+..... ....+..|++++..+.+.. .+|.+..+.... +..+++||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999998743 5789999876544 2456899999999998742 256665555443 2568999999
Q ss_pred -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-------------------------------------------
Q 014544 86 -GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHS------------------------------------------- 121 (423)
Q Consensus 86 -~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs------------------------------------------- 121 (423)
|.++.+.+.. ..++......++.+++.+|.+||+
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 5555554321 346666777777777777777773
Q ss_pred -------------CCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 122 -------------RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 122 -------------~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
..++|+|+.|.|||++.+ ..+.+.|+||+.+.
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~ 205 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEeccccc
Confidence 236899999999999511 14668999999875
No 446
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.18 E-value=8.9e-10 Score=111.47 Aligned_cols=182 Identities=15% Similarity=0.145 Sum_probs=126.9
Q ss_pred eEEeceeeecCceeEE-EEEEcCCCceEEEEEecCCCC--chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 9 YKLGRKIGSGSFGEIF-LASHVDTNEIVAVKIENSGTK--HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy-~a~~~~~~~~vaiKi~~~~~~--~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
|++ ...+-++.+ +| .|..+.++.+|.|...+.... .....+-++.++.++|+..+..+.. .......|||+|.+
T Consensus 15 Y~l-e~~~~~~~a-~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-~e~~~~~ylvTErV 91 (690)
T KOG1243|consen 15 YDL-EETAFSSEA-LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-TEEEGTLYLVTERV 91 (690)
T ss_pred ccc-ccccCCCcc-cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-hcccCceEEEeecc
Confidence 444 333333333 44 466677888999988776655 4446778889999998655544444 44555899999988
Q ss_pred CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 86 GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH-SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 86 ~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-s~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
.. |..++.. +....+...+.||+.||.||| +.+++|++|.-+.|++ +..|..||++|-++..........
T Consensus 92 ~P-l~~~lk~----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~~- 162 (690)
T KOG1243|consen 92 RP-LETVLKE----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAPA- 162 (690)
T ss_pred cc-HHHHHHH----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCccc-
Confidence 32 4445543 336778888999999999997 6689999999999999 489999999999987654433211
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCC
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGS 210 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~ 210 (423)
....--..|..|+.+.... -..|.|-|||++++++.|.
T Consensus 163 ------~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 163 ------KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ------ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 1112223456666554322 3469999999999999993
No 447
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.14 E-value=2.9e-09 Score=99.98 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=93.9
Q ss_pred eeEEEEEEcCCCceEEEEEecCCC-------------CchhHHHHHHHHHHHcCC-CCCCeEEEeeee-----CCeeEEE
Q 014544 21 GEIFLASHVDTNEIVAVKIENSGT-------------KHPQLLYEAKVYKILQGG-SGIPNIKWYGVD-----GEDNVLV 81 (423)
Q Consensus 21 g~Vy~a~~~~~~~~vaiKi~~~~~-------------~~~~~~~E~~~l~~l~~~-~~i~~i~~~~~~-----~~~~~lv 81 (423)
..|+++.. .|+.|.||...... ......+|...+..|... -..|....++.. ....+||
T Consensus 36 rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 36 RRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred ceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 34666654 56789999653322 111377999999888542 122333444442 2357899
Q ss_pred EeccCC--CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEec----cCCCCeEEEeecccee
Q 014544 82 LDLLGP--SLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGL----GRKANQVYIIDFGLAK 154 (423)
Q Consensus 82 ~e~~~~--sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~----~~~~~~vkL~DFGla~ 154 (423)
||++++ +|.+++... ....+......++.+++..+.-||..||+|+|+++.|||+.. .+....+.|+||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 999955 688887532 344667788899999999999999999999999999999952 1235789999999875
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=1.1e-10 Score=108.34 Aligned_cols=179 Identities=12% Similarity=0.148 Sum_probs=118.8
Q ss_pred CCeeEEEEecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccccCCCceEEeccCCCCeEEEe
Q 014544 75 GEDNVLVLDLL-GPSLEDLFVYC---RRKFSLKTVLMLADQMIARIEYVHSRG--FLHRDIKPDNFLMGLGRKANQVYII 148 (423)
Q Consensus 75 ~~~~~lv~e~~-~~sL~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LHs~g--iiHrDLKp~NILl~~~~~~~~vkL~ 148 (423)
.....++.||+ .|++..+|++. ...+......+|+.||+.||.|||+.. |+|+++..+-|++. .++-+|+.
T Consensus 144 ~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig 220 (458)
T KOG1266|consen 144 KPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIG 220 (458)
T ss_pred ccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEec
Confidence 34568899999 89999998743 456889999999999999999999874 99999999999994 67767764
Q ss_pred eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCC-CchhhhhHHHHHH
Q 014544 149 DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ-GLKAATKKQKYDK 227 (423)
Q Consensus 149 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~-~~~~~~~~~~~~~ 227 (423)
--.-..... ......-.......+-+.|.|||.=.....+-++|||+||....+|.-+..--. +.......+.+..
T Consensus 221 ~~ap~s~h~---s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~ 297 (458)
T KOG1266|consen 221 SVAPDSTHP---SVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIAN 297 (458)
T ss_pred ccCccccch---hhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhh
Confidence 211110000 000000011223355678999987665566779999999999999998765422 2111111111111
Q ss_pred HHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHH
Q 014544 228 ICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLK 270 (423)
Q Consensus 228 i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~ 270 (423)
..+. .+ ..--+.++..|+.-.|..||++..++
T Consensus 298 ---~i~~--le------n~lqr~~i~kcl~~eP~~rp~ar~ll 329 (458)
T KOG1266|consen 298 ---VIIG--LE------NGLQRGSITKCLEGEPNGRPDARLLL 329 (458)
T ss_pred ---heee--cc------CccccCcCcccccCCCCCCcchhhhh
Confidence 1110 00 12235788899999999999998874
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.10 E-value=3.7e-10 Score=100.20 Aligned_cols=125 Identities=27% Similarity=0.367 Sum_probs=81.6
Q ss_pred eEEEEEEcCCCceEEEEEecCCC--------------C--------------chhHHHHHHHHHHHcCCC-CCCeEEEee
Q 014544 22 EIFLASHVDTNEIVAVKIENSGT--------------K--------------HPQLLYEAKVYKILQGGS-GIPNIKWYG 72 (423)
Q Consensus 22 ~Vy~a~~~~~~~~vaiKi~~~~~--------------~--------------~~~~~~E~~~l~~l~~~~-~i~~i~~~~ 72 (423)
.||.|... .+..+|||+.+... . .....+|.+.|..+.... .+|.+..+.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999864 47789999854221 0 012578999999998653 466665442
Q ss_pred eeCCeeEEEEeccC--CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH-HHhCCccccccCCCceEEeccCCCCeEEEee
Q 014544 73 VDGEDNVLVLDLLG--PSLEDLFVYCRRKFSLKTVLMLADQMIARIEY-VHSRGFLHRDIKPDNFLMGLGRKANQVYIID 149 (423)
Q Consensus 73 ~~~~~~~lv~e~~~--~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~-LHs~giiHrDLKp~NILl~~~~~~~~vkL~D 149 (423)
..+|||||++ |.....+... .++......++.+++..+.. +|+.||+|+||.+.|||++ .+.++|+|
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~~~~iID 149 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DGKVYIID 149 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TTCEEE--
T ss_pred ----CCEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cceEEEEe
Confidence 5689999997 6444444432 12245567788888886655 5799999999999999994 44999999
Q ss_pred ccceeecc
Q 014544 150 FGLAKKYR 157 (423)
Q Consensus 150 FGla~~~~ 157 (423)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99987643
No 450
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.5e-10 Score=115.82 Aligned_cols=155 Identities=14% Similarity=0.190 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCC--CCcccccCccccchhc
Q 014544 110 DQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYREN--KNLTGTARYASCNTHL 186 (423)
Q Consensus 110 ~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~--~~~~gt~~Y~aPE~~~ 186 (423)
.+++.||.|+|.. ++||++|.|++|.+ +..+.+||+.|+++.....+.......|... ....-...|.|||.+.
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hcccchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3455999999965 89999999999999 5889999999999877665433222222222 2334456899999999
Q ss_pred CCCCCCcchHHHHHHHHHHHH-hCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCC
Q 014544 187 GIEQSRRDDLESLGYVLLYFL-RGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPD 265 (423)
Q Consensus 187 ~~~~s~~sDVwSlGvil~ell-tG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 265 (423)
+...+.++|+|||||++|.+. .|+.-+.......... ...............++|.++++-+.+++..++.-||+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~----~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~ 258 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS----FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT 258 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhh----hhhcccccccccccccCcHHHHHHHHHHhcCCcccCcc
Confidence 988899999999999999998 5665554432221111 11122222222233678999999999999999999998
Q ss_pred hHHHHH
Q 014544 266 YGFLKR 271 (423)
Q Consensus 266 ~~~l~~ 271 (423)
+.++..
T Consensus 259 ~~~l~~ 264 (700)
T KOG2137|consen 259 LDLLLS 264 (700)
T ss_pred hhhhhc
Confidence 776644
No 451
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.82 E-value=3.6e-08 Score=84.79 Aligned_cols=128 Identities=24% Similarity=0.423 Sum_probs=99.4
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCC
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPS 88 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~s 88 (423)
++.+.|++|.+|.||++.+ .+..+|+|+-+.+.....+..|++++..+......|.+++|+.+ ++.|||. |..
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~ 98 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRP 98 (201)
T ss_pred hhhhhhhcccccEEEEeec--cCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcc
Confidence 4567899999999999998 46689999999999899999999999999999999999998865 3559999 558
Q ss_pred HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCC--CceEEeccCCCCeEEEeeccceee
Q 014544 89 LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKP--DNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 89 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp--~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
|.+.... .+...+ ..++++---|-..||-|..|.- .||++ .++.+.|+||..|+.
T Consensus 99 L~~~~~~----~~rk~l----~~vlE~a~~LD~~GI~H~El~~~~k~vlv----~~~~~~iIDFd~At~ 155 (201)
T COG2112 99 LGKLEIG----GDRKHL----LRVLEKAYKLDRLGIEHGELSRPWKNVLV----NDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhhc----ccHHHH----HHHHHHHHHHHHhccchhhhcCCceeEEe----cCCcEEEEEccchhh
Confidence 8776542 122233 3344554456677999999864 46666 456999999998863
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.82 E-value=1.7e-07 Score=83.87 Aligned_cols=137 Identities=13% Similarity=0.115 Sum_probs=99.1
Q ss_pred eecCceeEEEEEEcCCCceEEEEEec--------CCCCchhHHHHHHHHHHHcCCC-CCCeEEEeeee----CCeeEEEE
Q 014544 16 GSGSFGEIFLASHVDTNEIVAVKIEN--------SGTKHPQLLYEAKVYKILQGGS-GIPNIKWYGVD----GEDNVLVL 82 (423)
Q Consensus 16 g~G~fg~Vy~a~~~~~~~~vaiKi~~--------~~~~~~~~~~E~~~l~~l~~~~-~i~~i~~~~~~----~~~~~lv~ 82 (423)
|+||.+-|+.... .|+.+-+|... .......+.+|...+..|.... .+|.+.+++.. ....+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 4589999999775 34467888533 1234567999999999997532 14444444332 22368999
Q ss_pred eccC--CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 83 DLLG--PSLEDLFVYC-RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 83 e~~~--~sL~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
|-++ .+|.+++... -.+.+......++.+++..|.-||+.|+.|+|+-+.|||+... ....|+++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~-g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTE-GKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCC-CCeeEEEEEhhccch
Confidence 9886 7888887542 2346777888999999999999999999999999999999421 123499999976653
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=1.2e-07 Score=85.84 Aligned_cols=109 Identities=20% Similarity=0.268 Sum_probs=82.0
Q ss_pred chhHHHHHHHHHHHcCC-CCCCeEEEeeeeC----CeeEEEEeccCC--CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 014544 46 HPQLLYEAKVYKILQGG-SGIPNIKWYGVDG----EDNVLVLDLLGP--SLEDLFVYCRRKFSLKTVLMLADQMIARIEY 118 (423)
Q Consensus 46 ~~~~~~E~~~l~~l~~~-~~i~~i~~~~~~~----~~~~lv~e~~~~--sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 118 (423)
.....+|...+..|... -..|....++... ...++|+|++.+ +|.+++..... ++......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHH
Confidence 44578899888888642 2234444555432 245899999943 68888875332 6777889999999999999
Q ss_pred HHhCCccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 119 VHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 119 LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
||..||+|+|+++.|||+..++....+.|+||+.++.
T Consensus 134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999999999996433345899999998765
No 454
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.77 E-value=7.9e-08 Score=86.40 Aligned_cols=138 Identities=20% Similarity=0.275 Sum_probs=92.0
Q ss_pred CccccCceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchh-----------HHHHHHHHHHHcC--CCCCCeE
Q 014544 2 ERIIGVKYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQ-----------LLYEAKVYKILQG--GSGIPNI 68 (423)
Q Consensus 2 ~~ii~~~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~-----------~~~E~~~l~~l~~--~~~i~~i 68 (423)
+.++.++|.+.+.+-.....-|.+... +++.+++|..+......+ ..+++..+..+.. ......+
T Consensus 26 ~~i~~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 26 EKILDNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred HHHHhCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 357789999999999888777777654 678899998665432221 2334444444432 1111111
Q ss_pred EEeee-----eCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 69 KWYGV-----DGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 69 ~~~~~-----~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
..... .....+++|||+ |..|.++.. +++ .++..|.++|.-||+.|+.|+|..|.|++++ +
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~ 170 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----N 170 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----C
Confidence 11111 224557999999 666666532 222 2556788889999999999999999999994 5
Q ss_pred CeEEEeecccee
Q 014544 143 NQVYIIDFGLAK 154 (423)
Q Consensus 143 ~~vkL~DFGla~ 154 (423)
+.++++||+..+
T Consensus 171 ~~i~iID~~~k~ 182 (229)
T PF06176_consen 171 NGIRIIDTQGKR 182 (229)
T ss_pred CcEEEEECcccc
Confidence 669999998764
No 455
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.77 E-value=8.2e-07 Score=87.82 Aligned_cols=210 Identities=18% Similarity=0.212 Sum_probs=141.8
Q ss_pred ceeEEEEEEcCCCceEEEEEecCCCCc--hhHHHHHHHHHHHcCCCCCCeEEE---eeeeCCeeEEEEecc--CCCHHHH
Q 014544 20 FGEIFLASHVDTNEIVAVKIENSGTKH--PQLLYEAKVYKILQGGSGIPNIKW---YGVDGEDNVLVLDLL--GPSLEDL 92 (423)
Q Consensus 20 fg~Vy~a~~~~~~~~vaiKi~~~~~~~--~~~~~E~~~l~~l~~~~~i~~i~~---~~~~~~~~~lv~e~~--~~sL~~~ 92 (423)
-.+.|++....+|..|++|.+...... .....-++.++++.|.+.|+.-.. +.......++|++|+ .++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899999999999999988433211 123445678899998766654322 223456789999999 6788887
Q ss_pred HHHh--------------cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccC
Q 014544 93 FVYC--------------RRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 93 l~~~--------------~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (423)
.-.. +.+.++..+|.++.|+..||.++|+.|+.-+-|.|.+||++ .+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---GKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---CcceEEEecccceeeecC
Confidence 6421 23477899999999999999999999999999999999994 555899988887765433
Q ss_pred CCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCC-CCCchhhhhHHHHHHHHhhccCCch
Q 014544 159 PTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLP-WQGLKAATKKQKYDKICEKKVSTPI 237 (423)
Q Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~P-f~~~~~~~~~~~~~~i~~~~~~~~~ 237 (423)
+.. |.+.+ -.+-|.=.||.+++.|.||..- |... ......+
T Consensus 446 d~~---------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d--~~~~s~~------------ 487 (655)
T KOG3741|consen 446 DPT---------------------EPLES---QQQNDLRDLGLLLLALATGTENSNRTD--STQSSHL------------ 487 (655)
T ss_pred CCC---------------------cchhH---HhhhhHHHHHHHHHHHhhccccccccc--chHHHHH------------
Confidence 221 11111 2356999999999999998543 2211 1111101
Q ss_pred HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 238 EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 238 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
..+...++.++++++......++.+ -+..+|+.
T Consensus 488 ~~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp 520 (655)
T KOG3741|consen 488 TRITTTYSTDLRNVVEYLESLNFRE-KSIQDLLP 520 (655)
T ss_pred HHhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHH
Confidence 1112334667778888888777775 34555443
No 456
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.72 E-value=1.1e-07 Score=87.33 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=96.7
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCC------------------------CchhHHHHHHHHHHHcCC-C
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT------------------------KHPQLLYEAKVYKILQGG-S 63 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~------------------------~~~~~~~E~~~l~~l~~~-~ 63 (423)
+.++.+||.|--+.||.|.+. .+..+|||.-+... ......+|.++|..|... -
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 457889999999999999976 47889999632110 011257899999999754 3
Q ss_pred CCCeEEEeeeeCCeeEEEEeccCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCC
Q 014544 64 GIPNIKWYGVDGEDNVLVLDLLGP-SLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 64 ~i~~i~~~~~~~~~~~lv~e~~~~-sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~ 142 (423)
.+|... +.+...+|||+..| .|..+ +++.+..-.++..|+.-+..+-..||||+|+.+=|||++ ++
T Consensus 172 ~VP~P~----~~nRHaVvMe~ieG~eL~~~------r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~---~d 238 (304)
T COG0478 172 KVPKPI----AWNRHAVVMEYIEGVELYRL------RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT---ED 238 (304)
T ss_pred CCCCcc----ccccceeeeehcccceeecc------cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe---cC
Confidence 344432 34678999999955 33222 234566666777777777777789999999999999994 78
Q ss_pred CeEEEeecccee
Q 014544 143 NQVYIIDFGLAK 154 (423)
Q Consensus 143 ~~vkL~DFGla~ 154 (423)
|.++++||--+.
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 899999997654
No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.68 E-value=4.2e-07 Score=83.55 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=56.8
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCC-CCeEEEeeeeCCeeEEEEeccCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSG-IPNIKWYGVDGEDNVLVLDLLGP 87 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~-i~~i~~~~~~~~~~~lv~e~~~~ 87 (423)
..||+|..+.||+. .+..+++|+.........+.+|.+++..+..... +|.+..++...+...++||++.|
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999984 2445789988776666678999999999986544 67788888777788899999955
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.60 E-value=3.1e-07 Score=93.48 Aligned_cols=139 Identities=22% Similarity=0.328 Sum_probs=92.4
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC------------------------------------------chhHH
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK------------------------------------------HPQLL 50 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~------------------------------------------~~~~~ 50 (423)
+.|+.++-|+||+|+... |+.||||+.+.+-. +-.+.
T Consensus 131 ~PiAsASIaQVH~A~L~s-G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKS-GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecC-CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 568899999999999765 99999998553210 00145
Q ss_pred HHHHHHHHHcC----CCCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 014544 51 YEAKVYKILQG----GSGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFL 125 (423)
Q Consensus 51 ~E~~~l~~l~~----~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~gii 125 (423)
+|+..+..+.+ .+.+..-..|.......+|+|||+ |..+.+........++.+.+.....++. +..+-..|+.
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f--~~q~~~dgff 287 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAF--LRQLLRDGFF 287 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHH--HHHHHhcCcc
Confidence 66666666653 222222234444456789999999 6677776543334566444433332222 3344458999
Q ss_pred ccccCCCceEEeccCCCCeEEEeeccceeecc
Q 014544 126 HRDIKPDNFLMGLGRKANQVYIIDFGLAKKYR 157 (423)
Q Consensus 126 HrDLKp~NILl~~~~~~~~vkL~DFGla~~~~ 157 (423)
|.|..|.||++ +.++++.+.|||+...+.
T Consensus 288 HaDpHpGNi~v---~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 288 HADPHPGNILV---RSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred ccCCCccceEE---ecCCcEEEEcCcceecCC
Confidence 99999999999 478999999999987654
No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.49 E-value=1.5e-06 Score=79.20 Aligned_cols=134 Identities=22% Similarity=0.286 Sum_probs=91.2
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC---------------------chh-----HHHHHHHHHHHcCC-CCC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---------------------HPQ-----LLYEAKVYKILQGG-SGI 65 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---------------------~~~-----~~~E~~~l~~l~~~-~~i 65 (423)
..|..|--+.||+|.. .++..||+|+.+.... ..+ ..+|...|.++... -.+
T Consensus 54 g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 54 GCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred eeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3566777779999975 4578899998664321 001 35677777777542 112
Q ss_pred CeEEEeeeeCCeeEEEEeccCCCH--HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCccccccCCCceEEeccCCC
Q 014544 66 PNIKWYGVDGEDNVLVLDLLGPSL--EDLFVYCRRKFSLKTVLMLADQMIARIEYVHS-RGFLHRDIKPDNFLMGLGRKA 142 (423)
Q Consensus 66 ~~i~~~~~~~~~~~lv~e~~~~sL--~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs-~giiHrDLKp~NILl~~~~~~ 142 (423)
|.-.. ....+|||||.|... .-.|. .-.+..+++..+..++++.+.-|-. .++||+||..=|||+ .+
T Consensus 133 P~Pi~----~~~nVLvMEfIg~~g~pAP~Lk--Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~----~~ 202 (268)
T COG1718 133 PEPIA----FRNNVLVMEFIGDDGLPAPRLK--DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILV----HD 202 (268)
T ss_pred CCcee----ecCCeEEEEeccCCCCCCCCcc--cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEE----EC
Confidence 22222 235689999996541 11111 1123444788889999999998887 899999999999999 38
Q ss_pred CeEEEeeccceeecc
Q 014544 143 NQVYIIDFGLAKKYR 157 (423)
Q Consensus 143 ~~vkL~DFGla~~~~ 157 (423)
+.++|+|||-|....
T Consensus 203 ~~p~iID~~QaV~~~ 217 (268)
T COG1718 203 GEPYIIDVSQAVTID 217 (268)
T ss_pred CeEEEEECccccccC
Confidence 899999999986543
No 460
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.46 E-value=3e-06 Score=77.54 Aligned_cols=139 Identities=18% Similarity=0.242 Sum_probs=81.2
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCC-CCeEEEeee---eCCeeEEEEecc-C
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSG-IPNIKWYGV---DGEDNVLVLDLL-G 86 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~-i~~i~~~~~---~~~~~~lv~e~~-~ 86 (423)
++.|+.|..+.||++.... ..+++|+.........+..|..+++.|..... +|.+..+.. .....+++|+++ |
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 4678999999999998754 47999987665344568899999999986543 566655332 333568999999 5
Q ss_pred CCHHH----------------HHHHh---c---CCCCHHH---------HHHH------------HHHHHH-HHHHHH--
Q 014544 87 PSLED----------------LFVYC---R---RKFSLKT---------VLML------------ADQMIA-RIEYVH-- 120 (423)
Q Consensus 87 ~sL~~----------------~l~~~---~---~~l~~~~---------~~~i------------~~qi~~-aL~~LH-- 120 (423)
..+.. .+... . ..+.... .... ...+.. .+..++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 55555 11110 0 0001000 0000 111222 233333
Q ss_pred -----hCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 121 -----SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 121 -----s~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
...++|+|+.|.|||++ +.++.+.|+||+.+.
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~--~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVD--PSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEE--SSTTEEEE--GTT-E
T ss_pred hccCCCcEEEEeccccccceee--eccceeEEEecccce
Confidence 24599999999999995 356777899998864
No 461
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.46 E-value=2.9e-06 Score=78.86 Aligned_cols=75 Identities=23% Similarity=0.300 Sum_probs=54.3
Q ss_pred eeeecCc-eeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-CCCHHH
Q 014544 14 KIGSGSF-GEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL-GPSLED 91 (423)
Q Consensus 14 ~Lg~G~f-g~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~ 91 (423)
.|..|.. ..||++... +..++||+..... ...+.+|++++..+...-.+|.+..++...+..++||+++ |.++..
T Consensus 5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 3445555 789999653 4678899876544 4568899999999986656777777776666789999999 545543
No 462
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.33 E-value=2.8e-06 Score=86.33 Aligned_cols=141 Identities=23% Similarity=0.312 Sum_probs=92.0
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCC---------------------------------------chhHHHHH
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTK---------------------------------------HPQLLYEA 53 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~---------------------------------------~~~~~~E~ 53 (423)
+.||.-+.|.||+|+.+. |+.||||+.+..-. +-.+.+|+
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 578999999999999766 99999998543211 00244555
Q ss_pred HHHHHHc----CCC-----CCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 014544 54 KVYKILQ----GGS-----GIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG 123 (423)
Q Consensus 54 ~~l~~l~----~~~-----~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~g 123 (423)
+-..++. +.+ .+|.++ .......+|+|||+ |..+.|+-.-....++...+..-+.++.. +-|=..|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy--~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~--~qIf~~G 321 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVY--WDLSTKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYL--EQIFKTG 321 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeeh--hhcCcceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHH--HHHHhcC
Confidence 4444333 222 134333 33445679999999 66565554433556777755554444332 2334568
Q ss_pred ccccccCCCceEEecc-CCCCeEEEeeccceeeccC
Q 014544 124 FLHRDIKPDNFLMGLG-RKANQVYIIDFGLAKKYRD 158 (423)
Q Consensus 124 iiHrDLKp~NILl~~~-~~~~~vkL~DFGla~~~~~ 158 (423)
++|+|=.|.||++..+ ..+..+.|-|||+...+..
T Consensus 322 ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 322 FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 9999999999999632 2467999999999876543
No 463
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.15 E-value=3.7e-07 Score=92.28 Aligned_cols=184 Identities=10% Similarity=0.064 Sum_probs=133.3
Q ss_pred eEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCeEEEee--eeCCeeEEEEeccC
Q 014544 9 YKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPNIKWYG--VDGEDNVLVLDLLG 86 (423)
Q Consensus 9 y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~i~~~~--~~~~~~~lv~e~~~ 86 (423)
|....-+++|+++.+++.+...+...+ .+++... ....-++++|.++++++ +.+.+++ ..+...+++|++++
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~---l~~rl~~eLLdK~n~P~--~~v~~~~d~~~E~~~~i~~~i~s 317 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT---LSRRLAIELLDKVNNPN--PVVRYLEDYDGEDYLWIPMRICS 317 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc---hhhHHHHHHHHHccCCC--CcccccccCCcccccchhhhhhc
Confidence 344456788999999999876655544 6655443 34566788899998866 3343333 34456789999994
Q ss_pred CC--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCc
Q 014544 87 PS--LEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRH 164 (423)
Q Consensus 87 ~s--L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (423)
+. .........-.+...+...+.+.-+.+|++||+.--+|+| ||+. ..+..++.||+....+....
T Consensus 318 ~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~----s~~~~~~~~~~v~~~L~~~~---- 385 (829)
T KOG0576|consen 318 TGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG----SEEEVKLLDFAVPPQLTRTM---- 385 (829)
T ss_pred CCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccc----cccccccccccCCcccCccc----
Confidence 33 3222221122244556667778888999999998888999 8887 46889999999987765543
Q ss_pred ccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 014544 165 IPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 214 (423)
Q Consensus 165 ~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~ 214 (423)
......+|+.++|||+..+..+....|+|++|.-..++.-|.+|-.
T Consensus 386 ----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred ----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 2346789999999999999999999999999998888887777654
No 464
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.10 E-value=0.0001 Score=66.04 Aligned_cols=129 Identities=19% Similarity=0.279 Sum_probs=91.0
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCC------------------CchhHHHHHHHHHHHc-C----CCCCCeE
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT------------------KHPQLLYEAKVYKILQ-G----GSGIPNI 68 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~------------------~~~~~~~E~~~l~~l~-~----~~~i~~i 68 (423)
...||+|+.-.||.-- .....+||+..... ...+..+|+..+..+. . ..+++.+
T Consensus 6 ~~~i~~G~~R~cy~HP---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CcccccCCCceEEECC---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 4578999999999643 24447899877655 2456788888887776 2 2456666
Q ss_pred EEeeeeCCeeEEEEecc-------CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 69 KWYGVDGEDNVLVLDLL-------GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 69 ~~~~~~~~~~~lv~e~~-------~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
+.+........+|+|.. ..+|.+++. ...++. ... ..+-+-..||-+.+|+.+||+|.||++...++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~--~~~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLK--EGGLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHH--cCCccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 66666767778888876 236777774 344555 333 33334457888999999999999999986655
Q ss_pred CC-eEEEee
Q 014544 142 AN-QVYIID 149 (423)
Q Consensus 142 ~~-~vkL~D 149 (423)
.. .++|+|
T Consensus 157 ~~~~lvlID 165 (199)
T PF10707_consen 157 GEFRLVLID 165 (199)
T ss_pred CceEEEEEe
Confidence 55 788888
No 465
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.08 E-value=2.2e-05 Score=72.53 Aligned_cols=73 Identities=19% Similarity=0.142 Sum_probs=47.5
Q ss_pred eceeeecCce-eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC--CCCCeEEEeeeeCC---eeEEEEecc
Q 014544 12 GRKIGSGSFG-EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG--SGIPNIKWYGVDGE---DNVLVLDLL 85 (423)
Q Consensus 12 ~~~Lg~G~fg-~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~--~~i~~i~~~~~~~~---~~~lv~e~~ 85 (423)
++.|+.|+.. .||+.. ..+++|+.........+.+|++++..|... -.+|.+...+...+ ..+++|+++
T Consensus 2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 2 IEPVDSGGTDNATFRLG-----DDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred ceeccCCCcccceEEcC-----CceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 3567777766 599762 347889866644555799999999999753 23455554443322 347899998
Q ss_pred -CCCH
Q 014544 86 -GPSL 89 (423)
Q Consensus 86 -~~sL 89 (423)
|.++
T Consensus 77 ~G~~l 81 (235)
T cd05155 77 EGETA 81 (235)
T ss_pred cCCCC
Confidence 4343
No 466
>PLN02876 acyl-CoA dehydrogenase
Probab=98.01 E-value=7.7e-05 Score=81.48 Aligned_cols=77 Identities=14% Similarity=0.219 Sum_probs=52.5
Q ss_pred EeceeeecCceeEEEEEEcCCC--ceEEEEEecCCC---CchhHHHHHHHHHHHcCCCCC--CeEEEeeeeC---CeeEE
Q 014544 11 LGRKIGSGSFGEIFLASHVDTN--EIVAVKIENSGT---KHPQLLYEAKVYKILQGGSGI--PNIKWYGVDG---EDNVL 80 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~--~~vaiKi~~~~~---~~~~~~~E~~~l~~l~~~~~i--~~i~~~~~~~---~~~~l 80 (423)
-.+.|+.|.+..+|+......+ ..+++|+..... ....+.+|+++++.|..+..+ |.+..++.+. ...|+
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~fl 121 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFY 121 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceE
Confidence 3577899999999998765432 357788654332 224588999999999743334 5555554443 35789
Q ss_pred EEeccCC
Q 014544 81 VLDLLGP 87 (423)
Q Consensus 81 v~e~~~~ 87 (423)
|||++.|
T Consensus 122 VME~v~G 128 (822)
T PLN02876 122 IMEYLEG 128 (822)
T ss_pred EEEecCC
Confidence 9999944
No 467
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.96 E-value=0.00013 Score=64.99 Aligned_cols=124 Identities=19% Similarity=0.259 Sum_probs=84.0
Q ss_pred CceEEeceeeecCc-eeEEEEEEcCCCceEEEEEecCC-----------------------CCchhHHHHHHHHHHHcCC
Q 014544 7 VKYKLGRKIGSGSF-GEIFLASHVDTNEIVAVKIENSG-----------------------TKHPQLLYEAKVYKILQGG 62 (423)
Q Consensus 7 ~~y~i~~~Lg~G~f-g~Vy~a~~~~~~~~vaiKi~~~~-----------------------~~~~~~~~E~~~l~~l~~~ 62 (423)
..++.++.||.|.- |.||+++. .|+.||||++..- ....-|..|++.+.+|++.
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 68899999999999 99999987 6789999983210 0112377899999988854
Q ss_pred CC--C--CeEEEeee-e-----------------CCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 014544 63 SG--I--PNIKWYGV-D-----------------GEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH 120 (423)
Q Consensus 63 ~~--i--~~i~~~~~-~-----------------~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH 120 (423)
.. + ...+.|.. + .....||.||....- .++ ..-+.+|.+-|..+|
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~---------~~~----~~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP---------PLQ----IRDIPQMLRDLKILH 181 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc---------ccc----hhHHHHHHHHHHHHH
Confidence 33 2 22222221 1 011246777652211 122 233457788889999
Q ss_pred hCCccccccCCCceEEeccCCCCeEEEeeccce
Q 014544 121 SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLA 153 (423)
Q Consensus 121 s~giiHrDLKp~NILl~~~~~~~~vkL~DFGla 153 (423)
..||+-+|+++.|..= =+|+|||.+
T Consensus 182 k~gI~~~Dv~~~ny~~--------G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGIVPRDVKPRNYRG--------GKLVDFSSS 206 (207)
T ss_pred HCCeeeccCccccccC--------CEEEecccC
Confidence 9999999999999863 279999864
No 468
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.90 E-value=0.00029 Score=64.94 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=48.5
Q ss_pred eceeeecCceeEEEEEEcC-CCceEEEEEecCCCCc-hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccC
Q 014544 12 GRKIGSGSFGEIFLASHVD-TNEIVAVKIENSGTKH-PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLG 86 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~-~~~~vaiKi~~~~~~~-~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~ 86 (423)
++.|..|-...+|++.... .++.|++|+....... ....+|+.++..+......|.+..... ..++|||+.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~ 75 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIP 75 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeC
Confidence 4567778888999997543 2567999986643321 234689999999976666777754332 248999983
No 469
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.89 E-value=0.0038 Score=62.01 Aligned_cols=73 Identities=27% Similarity=0.326 Sum_probs=52.2
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecC---------CCCchhHHHHHHHHHHHcCC--CCCCeEEEeeeeCCeeEE
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENS---------GTKHPQLLYEAKVYKILQGG--SGIPNIKWYGVDGEDNVL 80 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~---------~~~~~~~~~E~~~l~~l~~~--~~i~~i~~~~~~~~~~~l 80 (423)
.+.||.|.+..||++.....++.|+||.... .....+...|.+.|..+... ..+|.+..+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 4678999999999999865445899997431 11334567888888887642 456767666 4466889
Q ss_pred EEeccC
Q 014544 81 VLDLLG 86 (423)
Q Consensus 81 v~e~~~ 86 (423)
|||++.
T Consensus 109 VME~L~ 114 (401)
T PRK09550 109 VMEDLS 114 (401)
T ss_pred EEecCC
Confidence 999984
No 470
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=97.86 E-value=0.0016 Score=63.49 Aligned_cols=70 Identities=19% Similarity=0.211 Sum_probs=47.7
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEec----C-----CCCchhHHHHHHHHHHHcCC--CCCCeEEEeeeeCCeeEEEE
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIEN----S-----GTKHPQLLYEAKVYKILQGG--SGIPNIKWYGVDGEDNVLVL 82 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~----~-----~~~~~~~~~E~~~l~~l~~~--~~i~~i~~~~~~~~~~~lv~ 82 (423)
.||.|....||++.....++.|+||.-. . .-...+...|.+.|+..... ..+|.+ |..+.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~v--y~~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRI--FHFDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeE--EEEccccceehH
Confidence 5799999999999975444679999421 1 22334567788888776542 235554 444667778999
Q ss_pred ecc
Q 014544 83 DLL 85 (423)
Q Consensus 83 e~~ 85 (423)
|++
T Consensus 80 EdL 82 (370)
T TIGR01767 80 EDL 82 (370)
T ss_pred hhC
Confidence 998
No 471
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.76 E-value=0.00018 Score=67.36 Aligned_cols=131 Identities=16% Similarity=0.148 Sum_probs=77.4
Q ss_pred eeeecCceeEEEEEEcCCCceEEEEEecCCCCc--hhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccCC-CHH
Q 014544 14 KIGSGSFGEIFLASHVDTNEIVAVKIENSGTKH--PQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLGP-SLE 90 (423)
Q Consensus 14 ~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~--~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~~-sL~ 90 (423)
.+..|-.+.+|+... +++.+++|+....... -...+|.++++.+......|.+..... .++||||+.| .+.
T Consensus 3 ~~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT 76 (256)
T ss_pred cCCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence 355688889999873 5667889976543322 246889999999987655677655432 3689999943 322
Q ss_pred --------------HHHHHhc------CCCCHH-HHHHHHHHH---------HHHHHHHHh--------CCccccccCCC
Q 014544 91 --------------DLFVYCR------RKFSLK-TVLMLADQM---------IARIEYVHS--------RGFLHRDIKPD 132 (423)
Q Consensus 91 --------------~~l~~~~------~~l~~~-~~~~i~~qi---------~~aL~~LHs--------~giiHrDLKp~ 132 (423)
..+.... ..++.. .+..+..++ ...+..+-. ..++|+|+.|.
T Consensus 77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 1111111 112221 111221111 111222221 25899999999
Q ss_pred ceEEeccCCCCeEEEeecccee
Q 014544 133 NFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 133 NILl~~~~~~~~vkL~DFGla~ 154 (423)
||+++ +++ +.|+||..|.
T Consensus 157 Nil~~---~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 157 NLVVT---PQG-LKLIDWEYAS 174 (256)
T ss_pred cEEEe---CCC-CEEEeccccC
Confidence 99995 333 7899998874
No 472
>PRK05231 homoserine kinase; Provisional
Probab=97.66 E-value=0.0014 Score=63.40 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=46.1
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCC-CCCeEEE------eeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS-GIPNIKW------YGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~-~i~~i~~------~~~~~~~~~lv~e~ 84 (423)
.+.|+.|....+|++... +..+++|+.. ......+..|..++..|.... .+|.+.. +....+..++++++
T Consensus 27 ~~~l~~G~~n~~y~v~t~--~g~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~ 103 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT--QGEYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTF 103 (319)
T ss_pred cchhccccccceEEEEeC--CCcEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEe
Confidence 355667777899998753 3368899876 334456677888888876421 1333321 22334567899999
Q ss_pred cCC
Q 014544 85 LGP 87 (423)
Q Consensus 85 ~~~ 87 (423)
+.|
T Consensus 104 l~G 106 (319)
T PRK05231 104 LEG 106 (319)
T ss_pred cCC
Confidence 844
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.63 E-value=0.00078 Score=64.88 Aligned_cols=138 Identities=18% Similarity=0.282 Sum_probs=79.9
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCC-CCeEEE------eeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSG-IPNIKW------YGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~-i~~i~~------~~~~~~~~~lv~e~ 84 (423)
.+.++.|....+|++.. . +..+++|+.........+..|.+++..|..... ++.+.. +....+..++++++
T Consensus 27 i~~~~~G~~n~~y~v~t-~-~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-D-VGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEe-C-CCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 55677777789999864 2 335788987664445567788888888864221 333322 11234567899999
Q ss_pred cCC-CH-----H------HHHHHh---cCCC--------CHHH---HH------------HHHHHHHHHHHHHHh-----
Q 014544 85 LGP-SL-----E------DLFVYC---RRKF--------SLKT---VL------------MLADQMIARIEYVHS----- 121 (423)
Q Consensus 85 ~~~-sL-----~------~~l~~~---~~~l--------~~~~---~~------------~i~~qi~~aL~~LHs----- 121 (423)
+.| .+ . ..+... ...+ .... .. .....+...++++..
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 833 21 1 111110 0111 0000 00 011123345555542
Q ss_pred --CCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 122 --RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 122 --~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
.+++|+|+.+.||+++ .++.+.|+||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~---~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFD---GDSVKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEE---CCceEEEeeccccc
Confidence 5899999999999995 45556899999863
No 474
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.62 E-value=0.0004 Score=66.85 Aligned_cols=138 Identities=21% Similarity=0.257 Sum_probs=95.6
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecCCC----------------------Cch------hHHHHHHHHHHHcC
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGT----------------------KHP------QLLYEAKVYKILQG 61 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~----------------------~~~------~~~~E~~~l~~l~~ 61 (423)
.|-..|..|--+.||.|.. .+|..+||||.+..- ..+ -...|++-|.+|..
T Consensus 147 ~inGCiSTGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~ 225 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN 225 (520)
T ss_pred ecccccccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4556788898999999985 457779999754210 000 13578888888875
Q ss_pred CCCCCeEEEeeeeCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccccCCCceEEeccC
Q 014544 62 GSGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVH-SRGFLHRDIKPDNFLMGLGR 140 (423)
Q Consensus 62 ~~~i~~i~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH-s~giiHrDLKp~NILl~~~~ 140 (423)
. .||.-.-. .-...+|||+|+|.+-.-.-.-..-.++...+..+-.|++.-+.-|. ..++||.||.-=|+|+
T Consensus 226 a-GIP~PePI--lLk~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly---- 298 (520)
T KOG2270|consen 226 A-GIPCPEPI--LLKNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY---- 298 (520)
T ss_pred c-CCCCCCce--eeecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE----
Confidence 3 23322111 11346899999965432221112345777888888889998888875 5689999999999999
Q ss_pred CCCeEEEeeccceee
Q 014544 141 KANQVYIIDFGLAKK 155 (423)
Q Consensus 141 ~~~~vkL~DFGla~~ 155 (423)
.+|.++|+|-+-+..
T Consensus 299 hdG~lyiIDVSQSVE 313 (520)
T KOG2270|consen 299 HDGKLYIIDVSQSVE 313 (520)
T ss_pred ECCEEEEEEcccccc
Confidence 689999999987754
No 475
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.57 E-value=0.00055 Score=65.72 Aligned_cols=70 Identities=14% Similarity=0.076 Sum_probs=48.5
Q ss_pred eceeeecCceeEEEEEEcC------CCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHVD------TNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~------~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
++.|..|-...+|++.... .++.|++|+...... .....+|.+++..+......|.+..+... .+|++|
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 3456667777999987543 257899999765432 24578999999999876666766655432 357888
Q ss_pred c
Q 014544 85 L 85 (423)
Q Consensus 85 ~ 85 (423)
+
T Consensus 79 i 79 (302)
T cd05156 79 I 79 (302)
T ss_pred e
Confidence 7
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.48 E-value=0.00046 Score=61.44 Aligned_cols=100 Identities=21% Similarity=0.253 Sum_probs=74.1
Q ss_pred HHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccC-CCHHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHh---CC
Q 014544 50 LYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLG-PSLEDLFVY--CRRKFSLKTVLMLADQMIARIEYVHS---RG 123 (423)
Q Consensus 50 ~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~-~sL~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LHs---~g 123 (423)
..|.-+++.|.+..++|.+.+++ + .+++.||.+ +++...... .-...+|..+..|+.++++.+++|+. ..
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~C--G--~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSC--G--RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeEC--C--CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 35888899999877777765443 2 367888885 444321000 01236899999999999999999997 34
Q ss_pred ccccccCCCceEEeccCCCCeEEEeeccceeec
Q 014544 124 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKY 156 (423)
Q Consensus 124 iiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~ 156 (423)
+.-.|++|+||-++ +++++|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~---~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVN---DDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEe---CCCcEEEEechhcchh
Confidence 77799999999995 7789999999877543
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.46 E-value=0.0016 Score=62.16 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=80.4
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCC-CCCeEEE------eeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS-GIPNIKW------YGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~-~i~~i~~------~~~~~~~~~lv~e~ 84 (423)
.+.|..|....+|++.. .+..+++|+... .....+..|++++..|.... .++.+.. +....+..++++++
T Consensus 19 i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTT--DSGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEe--CCCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 55677787789999864 344688998765 44556888999999986532 2333321 12234566899999
Q ss_pred cCC-CHH-----------HHHHHh---cCCC----------CHHHH----------HHHHHHHHHHHHHHHh-------C
Q 014544 85 LGP-SLE-----------DLFVYC---RRKF----------SLKTV----------LMLADQMIARIEYVHS-------R 122 (423)
Q Consensus 85 ~~~-sL~-----------~~l~~~---~~~l----------~~~~~----------~~i~~qi~~aL~~LHs-------~ 122 (423)
+.| .+. ..+... ...+ .+... ......+..++.++.. .
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 943 321 111100 0001 10000 0011123334455443 4
Q ss_pred CccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 123 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 123 giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
+++|+|+.|.|||++ +++.+.|+||+.+.
T Consensus 176 ~l~HgD~~~~Nil~~---~~~~~~iIDfe~a~ 204 (296)
T cd05153 176 GVIHADLFRDNVLFD---GDELSGVIDFYFAC 204 (296)
T ss_pred cCCccCcCcccEEEe---CCceEEEeehhhhc
Confidence 799999999999994 45556899998863
No 478
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.42 E-value=0.00093 Score=72.63 Aligned_cols=197 Identities=16% Similarity=0.125 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEeeeeCCeeE----EEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 014544 49 LLYEAKVYKILQGGSGIPNIKWYGVDGEDNV----LVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG 123 (423)
Q Consensus 49 ~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~----lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~g 123 (423)
...|...+.++.| .++..+..|+......- +..++| ..++...+.. -..++..+++.+..++..||.|+|+..
T Consensus 229 ~E~e~~~l~k~~~-~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-v~~i~~~~~r~~~~~~~~GL~~~h~~~ 306 (1351)
T KOG1035|consen 229 TEIELESLSKIAH-DNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-VGSIPLETLRILHQKLLEGLAYLHSLS 306 (1351)
T ss_pred HHHHHHHHHhhcc-ccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-ccccCHHHHHHHHHHHhhhHHHHHHhc
Confidence 3456666777766 44444544544332222 333555 5566666554 456889999999999999999999996
Q ss_pred ccccccCCCceEEeccCCCCeEEEe--eccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCC--CcchHHHH
Q 014544 124 FLHRDIKPDNFLMGLGRKANQVYII--DFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQS--RRDDLESL 199 (423)
Q Consensus 124 iiHrDLKp~NILl~~~~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s--~~sDVwSl 199 (423)
..|.-|...-..-...+..+.+.++ ||+.++.+.+..... ...-+..|.++|......+. +..|+|.+
T Consensus 307 l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--------~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 307 LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--------SDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred cceeEEecccccccccCccceeecchhhhcccccCCCcccch--------hhcCccccccccccccccchhhhhhHHHHH
Confidence 6555554442222222455666666 999888766544321 23345667788887766654 45799999
Q ss_pred HHHHHHHHhCCCCCCCchhhhhHHHHHHHHhhccCCchHHhhccChHHHHHHHHHHHcCCCCCCCChHHHHHH
Q 014544 200 GYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRL 272 (423)
Q Consensus 200 Gvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 272 (423)
|..+..+..|..+-... ..+...++........+.+..|+..++++|+.+.+++..
T Consensus 379 gll~~~~~~~~~i~~~~-----------------~~~~~~l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~ 434 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKS-----------------AVPVSLLDVLSTSELLDALPKCLDEDSEERLSALELLTH 434 (1351)
T ss_pred HHHHhhhhhcCcccccc-----------------cchhhhhccccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence 99999999876553211 011111111122367788889999999999999888663
No 479
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.35 E-value=0.0011 Score=62.77 Aligned_cols=49 Identities=10% Similarity=0.156 Sum_probs=32.3
Q ss_pred ceeeecCce---eEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCC
Q 014544 13 RKIGSGSFG---EIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGG 62 (423)
Q Consensus 13 ~~Lg~G~fg---~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~ 62 (423)
+.+..|..| .||.+.+ ..|..+++|.-........+.+|++++..|...
T Consensus 14 ~~~~~~~~g~~~~v~~i~~-~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~ 65 (276)
T cd05152 14 ETLSLNESGLDFQVVFAKD-TDGVPWVLRIPRRPDVSERAAAEKRVLALVRKH 65 (276)
T ss_pred CcceecCCcceeEEEEEEc-CCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 344444444 5555432 246788999876544556789999999999864
No 480
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.34 E-value=0.00017 Score=68.22 Aligned_cols=133 Identities=20% Similarity=0.320 Sum_probs=91.3
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCC----------C--------------CchhHHHHHHHHHHHcCC-
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSG----------T--------------KHPQLLYEAKVYKILQGG- 62 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~----------~--------------~~~~~~~E~~~l~~l~~~- 62 (423)
-+.++.+||-|--+.||.+.+.. |++.++|+-+.. . ..-...+|...|+.|..+
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~-G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g 171 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEE-GNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG 171 (465)
T ss_pred hhhhccccccccccceEEEecCC-CCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence 35688999999999999998754 777889952211 0 001246788889888752
Q ss_pred CCCCeEEEeeeeCCeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCCCceEEeccCC
Q 014544 63 SGIPNIKWYGVDGEDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRGFLHRDIKPDNFLMGLGRK 141 (423)
Q Consensus 63 ~~i~~i~~~~~~~~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~giiHrDLKp~NILl~~~~~ 141 (423)
.-+|... +.+..++|||+. +-.|..... -.+ +-.+...+..-+.-|-.+|+||+|..-=||++ ++
T Consensus 172 fpVPkpi----D~~RH~Vvmelv~g~Pl~~v~~----v~d---~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv---~d 237 (465)
T KOG2268|consen 172 FPVPKPI----DHNRHCVVMELVDGYPLRQVRH----VED---PPTLYDDLMGLIVRLANHGLIHGDFNEFNIMV---KD 237 (465)
T ss_pred CCCCCcc----cccceeeHHHhhcccceeeeee----cCC---hHHHHHHHHHHHHHHHHcCceecccchheeEE---ec
Confidence 2233322 446789999998 555544321 122 33344455555677888999999999999999 47
Q ss_pred CCeEEEeeccceee
Q 014544 142 ANQVYIIDFGLAKK 155 (423)
Q Consensus 142 ~~~vkL~DFGla~~ 155 (423)
++.++++||--...
T Consensus 238 d~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 238 DDKIVVIDFPQMVS 251 (465)
T ss_pred CCCEEEeechHhhc
Confidence 88999999976543
No 481
>PLN02236 choline kinase
Probab=97.22 E-value=0.0089 Score=58.57 Aligned_cols=137 Identities=15% Similarity=0.183 Sum_probs=80.2
Q ss_pred eceeeecCceeEEEEEEcC----CCceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc-
Q 014544 12 GRKIGSGSFGEIFLASHVD----TNEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL- 85 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~----~~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~- 85 (423)
...|..|-...+|++.... .++.|++|+...... .-....|..+++.+.....-|.+..++..+ .|++|+
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~ 116 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIH 116 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeC
Confidence 3455558888999987532 246799998765432 112478999999998877777776554322 578888
Q ss_pred CCCHHHH--------------HHHh-cCC------CC-HHHHHHHHHHH-----------------HHHHHHH----H--
Q 014544 86 GPSLEDL--------------FVYC-RRK------FS-LKTVLMLADQM-----------------IARIEYV----H-- 120 (423)
Q Consensus 86 ~~sL~~~--------------l~~~-~~~------l~-~~~~~~i~~qi-----------------~~aL~~L----H-- 120 (423)
+.++... +... ... .. ...+..++.++ ...+..| .
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 3333210 1100 000 11 22222332221 1112122 1
Q ss_pred --hCCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 121 --SRGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 121 --s~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
...++|+|+++.|||++ +.++.++|+||..|.
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~--~~~~~~~lID~Eya~ 230 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMID--EETRAITIIDYEYAS 230 (344)
T ss_pred CCCceEEeCCCCcCcEEEe--CCCCcEEEEeehhcc
Confidence 22589999999999995 234689999998874
No 482
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.17 E-value=0.0018 Score=64.98 Aligned_cols=166 Identities=20% Similarity=0.195 Sum_probs=94.7
Q ss_pred CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 014544 44 TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSRG 123 (423)
Q Consensus 44 ~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~g 123 (423)
....+++-....++.+.|.+....+..-.......++|||+++.+|.+++.... +-..... .+|
T Consensus 24 ~~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~~--l~~~s~~--------------~~~ 87 (725)
T KOG1093|consen 24 PNSIQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTGN--LKDESLL--------------AHG 87 (725)
T ss_pred CcHHHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhhccchHHHHHhcc--cchhhhc--------------ccc
Confidence 344456777788888887444333333333455689999999999999987422 2111111 222
Q ss_pred ccccccCCCceEEeccCCCCeEEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHH
Q 014544 124 FLHRDIKPDNFLMGLGRKANQVYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVL 203 (423)
Q Consensus 124 iiHrDLKp~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil 203 (423)
+.| -|| ++.+| .++... .... .+|+||||+|.++
T Consensus 88 ~~~-----~~~----------~~~td-~~~t~~--------------~~~~----------------~pKsdVwsl~~i~ 121 (725)
T KOG1093|consen 88 VLH-----LNI----------IYITD-HFLTKY--------------PSPI----------------GPKSDVWSLGFII 121 (725)
T ss_pred cce-----ehh----------hhccc-cccccC--------------CCCC----------------CcchhhhhHHHHH
Confidence 222 222 23333 111000 0111 1499999999999
Q ss_pred HHHHhCCCCCCCchhhhhHHHHHHHHhhccCCch----HHhhccChHHHHHHHHHHHcCCCCCCCChHHHHH
Q 014544 204 LYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPI----EVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKR 271 (423)
Q Consensus 204 ~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 271 (423)
.++.-|...|......+....+.+.......... ......++..+..+...|+-..|..||...++.+
T Consensus 122 ~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k 193 (725)
T KOG1093|consen 122 LELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSK 193 (725)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhc
Confidence 9999998888765444333333222111110000 0112234777889999999999999997776644
No 483
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.09 E-value=6.9e-05 Score=82.87 Aligned_cols=131 Identities=11% Similarity=-0.013 Sum_probs=100.0
Q ss_pred eCCeeEEEEecc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCC-----ccccccCCCceEEeccCCCCe
Q 014544 74 DGEDNVLVLDLL-GPSLEDLFVYCRR---KFSLKTVLMLADQMIARIEYVHSRG-----FLHRDIKPDNFLMGLGRKANQ 144 (423)
Q Consensus 74 ~~~~~~lv~e~~-~~sL~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LHs~g-----iiHrDLKp~NILl~~~~~~~~ 144 (423)
.....+.+++++ +|.+.+.+.+.-. .+...-+.....+.+.+..-+|+.. .+|++||+-|.+| ..+..
T Consensus 1302 ~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmI---Vtny~ 1378 (2724)
T KOG1826|consen 1302 ESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMI---VTNYN 1378 (2724)
T ss_pred CChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhccce---ecCCc
Confidence 344568899999 8999998875322 2444445555555577888877652 7899999999999 47788
Q ss_pred EEEeeccceeeccCCCCCCcccccCCCCcccccCccccchhcCCCCCCcchHHHHHHHHHHHHhCCCCCC
Q 014544 145 VYIIDFGLAKKYRDPTTNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQ 214 (423)
Q Consensus 145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDVwSlGvil~elltG~~Pf~ 214 (423)
+|+.++|+.+....... ..+...+++.|+++++.....++.++|+|..|+-+|++..|..+|-
T Consensus 1379 v~~gk~gLdKIknp~~s-------f~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1379 VKLGKGGLDKIKNPVLS-------FFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred ccccccccccccCchHh-------hhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHH
Confidence 99999999983322221 2335678889999999998889999999999999999999988874
No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=97.09 E-value=0.0074 Score=58.80 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=46.9
Q ss_pred ceEEeceeeecCceeEEEEEEcCC---CceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEe
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDT---NEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLD 83 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~---~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e 83 (423)
..++. .|..|-...+|++..... +..|++|+...... .-....|..+++.+.....-|.+..+...+ +|.+
T Consensus 16 ~i~i~-~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~P~~l~~~~~G----~i~~ 90 (330)
T PLN02421 16 DFSVE-RISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFGAKLLGVFGNG----MIQS 90 (330)
T ss_pred ceEEE-EeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCCCceeEEeCCc----Eeeh
Confidence 33444 444477778999875432 23799998765432 123468999999998776667776554322 5778
Q ss_pred cc
Q 014544 84 LL 85 (423)
Q Consensus 84 ~~ 85 (423)
|+
T Consensus 91 fi 92 (330)
T PLN02421 91 FI 92 (330)
T ss_pred hh
Confidence 77
No 485
>PRK10593 hypothetical protein; Provisional
Probab=97.07 E-value=0.004 Score=59.69 Aligned_cols=107 Identities=17% Similarity=0.101 Sum_probs=74.4
Q ss_pred ceEEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCC--CCCeEEEeeee---CCeeEEEE
Q 014544 8 KYKLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGS--GIPNIKWYGVD---GEDNVLVL 82 (423)
Q Consensus 8 ~y~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~--~i~~i~~~~~~---~~~~~lv~ 82 (423)
.-.-.+.||.|..+.||+....+ + .+++|+.+.......+..|++.++.|.... .+|.+..++.+ .+..+|||
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~-~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQ-G-NPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hhheeeecCCccceeEEEEEcCC-C-CEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 44456789999999999986432 3 477888544334457999999999998643 46667655443 36689999
Q ss_pred ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 014544 83 DLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR 122 (423)
Q Consensus 83 e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~ 122 (423)
|++ +.++.+. ..+......+..+++.+|.-||+.
T Consensus 93 E~i~G~~~~~~------~~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 93 ERLRGVSVEAP------ARTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred eccCCEecCCC------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence 999 5555441 123444566777888888889874
No 486
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.97 E-value=0.0071 Score=59.72 Aligned_cols=72 Identities=21% Similarity=0.284 Sum_probs=49.7
Q ss_pred eceeeecCceeEEEEEEcCCCceEEEEE----ecC----CCCchhHHHHHHHHHHHcC--CCCCCeEEEeeeeCCeeEEE
Q 014544 12 GRKIGSGSFGEIFLASHVDTNEIVAVKI----ENS----GTKHPQLLYEAKVYKILQG--GSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi----~~~----~~~~~~~~~E~~~l~~l~~--~~~i~~i~~~~~~~~~~~lv 81 (423)
.+.||.|.-..||++.+...++.|+||. ++. .-...+...|.+.|+.+.. +..+|.++.| +.+...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 5688999999999999844356799994 221 1233456788888887764 2345655544 56677888
Q ss_pred Eecc
Q 014544 82 LDLL 85 (423)
Q Consensus 82 ~e~~ 85 (423)
||++
T Consensus 112 MEdL 115 (409)
T PRK12396 112 MEDL 115 (409)
T ss_pred HHhC
Confidence 9888
No 487
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.71 E-value=0.024 Score=53.96 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=51.8
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHc--CCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQ--GGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~--~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
+-.+.|+.|....+|+.. .+++.+.||+-. ......+..|++-|+.|. ..-.+|.+..++...+..+|+|||+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~-~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNS-ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEE-GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecC-hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 445678889999999987 567789999876 444566899999999994 4566788888888888889999998
No 488
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.41 E-value=0.089 Score=50.47 Aligned_cols=29 Identities=45% Similarity=0.832 Sum_probs=24.5
Q ss_pred CCccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 122 RGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 122 ~giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
.+++|+|+.+.||+++ . +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~---~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK---D-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEe---C-CcEEEEECcccc
Confidence 4799999999999994 3 678999998753
No 489
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.41 E-value=0.071 Score=53.02 Aligned_cols=73 Identities=12% Similarity=0.281 Sum_probs=49.2
Q ss_pred EeceeeecCceeEEEEEEcCCCceEEEEEec-----CCC----CchhHHHHHHHHHHHcC--CCCCCeEEEeeeeCCeeE
Q 014544 11 LGRKIGSGSFGEIFLASHVDTNEIVAVKIEN-----SGT----KHPQLLYEAKVYKILQG--GSGIPNIKWYGVDGEDNV 79 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~-----~~~----~~~~~~~E~~~l~~l~~--~~~i~~i~~~~~~~~~~~ 79 (423)
-.+.||.|....||++.+ .+..|+||.-. ... ...+...|++.|+.+.. +..+|.++.++. +..+
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~v 111 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMAL 111 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCE
Confidence 467789999999999986 34569999643 111 33445667777776653 235666666654 5678
Q ss_pred EEEeccCC
Q 014544 80 LVLDLLGP 87 (423)
Q Consensus 80 lv~e~~~~ 87 (423)
++||++.+
T Consensus 112 lvME~L~~ 119 (418)
T PLN02756 112 IGMRYLEP 119 (418)
T ss_pred EEEeecCC
Confidence 89999944
No 490
>PRK11768 serine/threonine protein kinase; Provisional
Probab=96.31 E-value=0.11 Score=50.47 Aligned_cols=68 Identities=13% Similarity=0.073 Sum_probs=42.0
Q ss_pred cCceeEEEEEEcCCCceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEE-------EeeeeCCeeEEEEeccCC
Q 014544 18 GSFGEIFLASHVDTNEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIK-------WYGVDGEDNVLVLDLLGP 87 (423)
Q Consensus 18 G~fg~Vy~a~~~~~~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~-------~~~~~~~~~~lv~e~~~~ 87 (423)
+.-..||++.. .++..+++|+.+... ...++..|.+.+..|... .++.+. .+...++..+.++++.+|
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~-gipv~~p~~~~G~~~~~~~g~~~~l~~~~~G 111 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEA-EIPVVAPLAFNGQTLHEHQGFRFALFPRRGG 111 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHC-CCCCCCCccCCCCEEEEECCEEEEEEeeeCC
Confidence 34457898874 345679999876443 455678899998888652 232211 112234566788888743
No 491
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.24 E-value=0.044 Score=52.70 Aligned_cols=139 Identities=17% Similarity=0.295 Sum_probs=75.7
Q ss_pred EEeceeeecCceeEEEEEEcCCCceEEEEEecC-C---CCchhHHHHHHHHHHHcCCCCCCeEEEeeeeCC----eeEEE
Q 014544 10 KLGRKIGSGSFGEIFLASHVDTNEIVAVKIENS-G---TKHPQLLYEAKVYKILQGGSGIPNIKWYGVDGE----DNVLV 81 (423)
Q Consensus 10 ~i~~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~-~---~~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~----~~~lv 81 (423)
.+++.+..|-.-.+|.... +++.++++ ... . .......+|.++++.+... .+|.-..++.+.+ ..|.|
T Consensus 28 ~~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~-~vP~p~~~~~~~~~~~g~pf~v 103 (321)
T COG3173 28 LIVEEISGGWSNDTFRLGD--TGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDV-DVPVPRAFGLCGEGYLGTPFYV 103 (321)
T ss_pred ceeeeccCCcccceEEEec--CCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCC-CCCCcccccccccCCCCCceEE
Confidence 3455554444445555544 37778888 321 1 2233467788888887653 3444333333333 45999
Q ss_pred EeccCC-------------------CHHHHHHHhcC-------------CCCHHHHHHHHHHH--------------HHH
Q 014544 82 LDLLGP-------------------SLEDLFVYCRR-------------KFSLKTVLMLADQM--------------IAR 115 (423)
Q Consensus 82 ~e~~~~-------------------sL~~~l~~~~~-------------~l~~~~~~~i~~qi--------------~~a 115 (423)
|+++.| .|.+.+....+ .+...++..+..+. ..-
T Consensus 104 ~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~ 183 (321)
T COG3173 104 MEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRL 183 (321)
T ss_pred EEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHH
Confidence 999954 12222221110 01111111222221 222
Q ss_pred HHHHHhC--------CccccccCCCceEEeccCCCCeEEEeeccceee
Q 014544 116 IEYVHSR--------GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKK 155 (423)
Q Consensus 116 L~~LHs~--------giiHrDLKp~NILl~~~~~~~~vkL~DFGla~~ 155 (423)
..+|+.+ .++|+|+.+.||++. ..+.+=+.||+++..
T Consensus 184 ~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~---~~~~~gVlDwe~~~l 228 (321)
T COG3173 184 IKWLEANRPPWAGPPVLVHGDYRPGNLIID---PGRPTGVLDWELATL 228 (321)
T ss_pred HHHHHhcCCCcCCCceeeeCCcccCCEEEe---CCCeeEEEecccccc
Confidence 4455433 489999999999995 555588999999864
No 492
>PTZ00384 choline kinase; Provisional
Probab=96.16 E-value=0.097 Score=52.00 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=45.6
Q ss_pred eceeeecCceeEEEEEEcCCC------ceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEec
Q 014544 12 GRKIGSGSFGEIFLASHVDTN------EIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDL 84 (423)
Q Consensus 12 ~~~Lg~G~fg~Vy~a~~~~~~------~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~ 84 (423)
.+.|..|-...+|++...... +.|++++..... ..-...+|.++++.|.....-|.+...+. .+++.||
T Consensus 55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~----~g~l~ef 130 (383)
T PTZ00384 55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNNFGPKIIGRFG----DFTIQEW 130 (383)
T ss_pred EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCCCCCeEEEecC----CEEEEEE
Confidence 345555888899999754321 125555432211 11234679999999998888888876653 3688898
Q ss_pred cC
Q 014544 85 LG 86 (423)
Q Consensus 85 ~~ 86 (423)
+.
T Consensus 131 Ie 132 (383)
T PTZ00384 131 VE 132 (383)
T ss_pred ec
Confidence 83
No 493
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=96.02 E-value=0.018 Score=52.05 Aligned_cols=50 Identities=22% Similarity=0.224 Sum_probs=32.3
Q ss_pred CceEEEEEecCCC-CchhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEEEecc
Q 014544 32 NEIVAVKIENSGT-KHPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLVLDLL 85 (423)
Q Consensus 32 ~~~vaiKi~~~~~-~~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv~e~~ 85 (423)
++.|+||+..... ..-....|..+++.+.....-|.+..++.. .+|.+|+
T Consensus 2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~----g~v~e~i 52 (211)
T PF01633_consen 2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAGLGPKIIYFFEN----GRVEEFI 52 (211)
T ss_dssp TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTTSSS-EEEEETT----EEEEE--
T ss_pred CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcCCCCeEEEEcCC----CcEEEEe
Confidence 4568999877663 334567899999999876666777665432 2466777
No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.87 E-value=0.044 Score=53.11 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=58.9
Q ss_pred eCCeeEEEEeccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCCCceEEeccCCCCeEEEeeccc
Q 014544 74 DGEDNVLVLDLLGPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYVHSR-GFLHRDIKPDNFLMGLGRKANQVYIIDFGL 152 (423)
Q Consensus 74 ~~~~~~lv~e~~~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LHs~-giiHrDLKp~NILl~~~~~~~~vkL~DFGl 152 (423)
+..+.|++|++-|+++.-. .....+++..++.+.+.-|.-+..+ .+-|||+.-.|||| +.|.|.|+||-+
T Consensus 297 e~~y~yl~~kdhgt~is~i-----k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI----d~GnvtLIDfkl 367 (488)
T COG5072 297 ETLYLYLHFKDHGTPISII-----KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI----DEGNVTLIDFKL 367 (488)
T ss_pred CceEEEEEEecCCceeeee-----ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee----ecCceEEEEeee
Confidence 4456688888888877543 2246788999999988888777765 68999999999999 489999999999
Q ss_pred eee
Q 014544 153 AKK 155 (423)
Q Consensus 153 a~~ 155 (423)
++.
T Consensus 368 sRl 370 (488)
T COG5072 368 SRL 370 (488)
T ss_pred eec
Confidence 984
No 495
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.87 E-value=0.06 Score=52.23 Aligned_cols=131 Identities=19% Similarity=0.243 Sum_probs=77.3
Q ss_pred CceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcCCCCCCe-----E--EEeeeeCC--eeEEEEeccCC-C
Q 014544 19 SFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQGGSGIPN-----I--KWYGVDGE--DNVLVLDLLGP-S 88 (423)
Q Consensus 19 ~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~~~~i~~-----i--~~~~~~~~--~~~lv~e~~~~-s 88 (423)
.-..||+....+ ++ +++|+........++..|...+..|......+. . .....-.. ..+-+.+|++| .
T Consensus 37 ~eN~~f~~~~~~-g~-~iLki~~~~~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~~ 114 (331)
T COG2334 37 EENSNFRVQTED-GR-YILKIYRPGWTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGRP 114 (331)
T ss_pred ccCceEEEEecC-CC-eEEEEecCCCCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCcC
Confidence 455788887633 33 499998887666778899999998875432211 1 11122233 67788888844 3
Q ss_pred HHH------------HHHH---hcCC-----------CCHH-------------HHHHHHHHHHHHHHHHHhC-------
Q 014544 89 LED------------LFVY---CRRK-----------FSLK-------------TVLMLADQMIARIEYVHSR------- 122 (423)
Q Consensus 89 L~~------------~l~~---~~~~-----------l~~~-------------~~~~i~~qi~~aL~~LHs~------- 122 (423)
+.. .+.. ..+. ..+. .-.....++...+..+.+.
T Consensus 115 ~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp~ 194 (331)
T COG2334 115 LERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLPA 194 (331)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCCc
Confidence 331 1100 0011 1111 0011334455555555542
Q ss_pred -C--ccccccCCCceEEeccCCCC-eEEEeecccee
Q 014544 123 -G--FLHRDIKPDNFLMGLGRKAN-QVYIIDFGLAK 154 (423)
Q Consensus 123 -g--iiHrDLKp~NILl~~~~~~~-~vkL~DFGla~ 154 (423)
+ +||+|+.|.||++. .+. .+-++||+-+.
T Consensus 195 ~~~~iIH~D~~~~NVl~d---~~~~~~g~iDFdDa~ 227 (331)
T COG2334 195 LGDQIIHGDLHPDNVLFD---DDTDVSGFIDFDDAG 227 (331)
T ss_pred ccceeeecCCCccceeEc---CCCCeeeEEEccccc
Confidence 3 99999999999994 444 48899999864
No 496
>PRK06148 hypothetical protein; Provisional
Probab=95.34 E-value=0.3 Score=54.83 Aligned_cols=47 Identities=15% Similarity=0.140 Sum_probs=33.2
Q ss_pred ceeeecCceeEEEEEEcCCCceEEEEEecCCCCchhHHHHHHHHHHHcC
Q 014544 13 RKIGSGSFGEIFLASHVDTNEIVAVKIENSGTKHPQLLYEAKVYKILQG 61 (423)
Q Consensus 13 ~~Lg~G~fg~Vy~a~~~~~~~~vaiKi~~~~~~~~~~~~E~~~l~~l~~ 61 (423)
+.|+ |..-.+|++.. .+++.+++|+.+.......+..|.+++..|..
T Consensus 31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~ 77 (1013)
T PRK06148 31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSEPRVESDFQTAALDHLAA 77 (1013)
T ss_pred eecC-CcCCceEEEEe-CCCCeEEEEEcCCccchhHHHHHHHHHHHHHh
Confidence 4564 45678898874 34667999999876655566777778877764
No 497
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.21 E-value=0.36 Score=46.40 Aligned_cols=29 Identities=24% Similarity=0.440 Sum_probs=25.5
Q ss_pred CccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 123 GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 123 giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
+++|+|+.+.|||+ +.++.+.++||..+.
T Consensus 197 ~lcHgD~~~~Nvl~---~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLY---DETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEE---cCCCCEEEEEhhhcc
Confidence 79999999999999 466789999998864
No 498
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=94.94 E-value=0.078 Score=52.21 Aligned_cols=61 Identities=23% Similarity=0.286 Sum_probs=43.7
Q ss_pred CeeEEEEecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HhCCccccccCCCceEEec
Q 014544 76 EDNVLVLDLL-GPSLEDLFVYCRRKFSLKTVLMLADQMIARIEYV-HSRGFLHRDIKPDNFLMGL 138 (423)
Q Consensus 76 ~~~~lv~e~~-~~sL~~~l~~~~~~l~~~~~~~i~~qi~~aL~~L-Hs~giiHrDLKp~NILl~~ 138 (423)
...+|+.+|. |-++..++.. ...+++.+..++.=.+.||--+ --.+++|.|+.|.||++..
T Consensus 318 ~~~vl~E~~~~Gl~v~~~v~~--~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf 380 (565)
T KOG1236|consen 318 TDLVLVETYERGLSVLRFVKW--KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRF 380 (565)
T ss_pred ccceeeeeccccccHHhhhhc--ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEe
Confidence 3456777777 7788887764 3355566777777677776444 4568999999999999953
No 499
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=93.84 E-value=0.58 Score=44.11 Aligned_cols=44 Identities=23% Similarity=0.388 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhC--CccccccCCCceEEeccCCCCeEEEeecccee
Q 014544 108 LADQMIARIEYVHSR--GFLHRDIKPDNFLMGLGRKANQVYIIDFGLAK 154 (423)
Q Consensus 108 i~~qi~~aL~~LHs~--giiHrDLKp~NILl~~~~~~~~vkL~DFGla~ 154 (423)
.+..+-.++.-++.. -++|+|+.|+|+|.+ +.+.++|+||-.|.
T Consensus 137 ~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t---~~~~l~LIDWEyAg 182 (269)
T COG0510 137 KLKELRRALEEVPKDDLVPCHNDLNPGNLLLT---DKGGLFLIDWEYAG 182 (269)
T ss_pred HHHHHHHHhhhcCCCceeeecCCCCccceEEc---CCCcEEEEecccCC
Confidence 444444555555544 489999999999994 56999999998774
No 500
>PTZ00296 choline kinase; Provisional
Probab=93.76 E-value=1.1 Score=45.31 Aligned_cols=72 Identities=18% Similarity=0.074 Sum_probs=47.8
Q ss_pred EeceeeecCceeEEEEEEcCC--------CceEEEEEecCCCC-chhHHHHHHHHHHHcCCCCCCeEEEeeeeCCeeEEE
Q 014544 11 LGRKIGSGSFGEIFLASHVDT--------NEIVAVKIENSGTK-HPQLLYEAKVYKILQGGSGIPNIKWYGVDGEDNVLV 81 (423)
Q Consensus 11 i~~~Lg~G~fg~Vy~a~~~~~--------~~~vaiKi~~~~~~-~~~~~~E~~~l~~l~~~~~i~~i~~~~~~~~~~~lv 81 (423)
-++.|..|-.-.+|++..... ++.|++|+...... .-....|..+++.+.....-|.+...+ ..+.+
T Consensus 109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~P~l~~~f----~gg~I 184 (442)
T PTZ00296 109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIAPQLLNTF----SGGRI 184 (442)
T ss_pred EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCCCceEEEe----CCCEE
Confidence 445666677778999875421 46799998765432 223567999999998766666665433 23567
Q ss_pred EeccC
Q 014544 82 LDLLG 86 (423)
Q Consensus 82 ~e~~~ 86 (423)
.+|+.
T Consensus 185 ~efi~ 189 (442)
T PTZ00296 185 EEWLY 189 (442)
T ss_pred EEeeC
Confidence 88883
Done!