Query 014547
Match_columns 423
No_of_seqs 225 out of 1165
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 13:33:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014547.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014547hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2qmwa1 c.94.1.1 (A:1-184) Pre 100.0 2.1E-58 1.5E-62 425.8 20.3 177 128-310 1-179 (184)
2 d2qmwa2 d.58.18.3 (A:185-264) 99.9 5.5E-24 4E-28 170.8 10.1 76 321-411 5-80 (80)
3 d1phza1 d.58.18.3 (A:19-115) P 99.9 6.2E-22 4.5E-26 164.2 10.9 79 315-408 13-92 (97)
4 d2f1fa1 d.58.18.6 (A:2-77) Ace 97.2 0.0017 1.2E-07 50.1 10.5 72 318-406 1-72 (76)
5 d2pc6a2 d.58.18.6 (A:1-77) Ace 97.0 0.0027 2E-07 49.0 9.8 72 318-406 2-73 (77)
6 d2fgca2 d.58.18.6 (A:27-104) A 96.9 0.0031 2.2E-07 48.8 9.8 72 318-406 3-74 (78)
7 d1y7pa2 d.58.18.12 (A:2-78) Hy 96.8 0.0019 1.4E-07 49.3 7.6 65 320-400 3-67 (77)
8 d1sc6a3 d.58.18.1 (A:327-410) 96.7 0.0064 4.7E-07 46.8 10.5 65 318-401 11-75 (84)
9 d1ygya3 d.58.18.1 (A:452-529) 96.6 0.0072 5.2E-07 46.1 9.6 64 319-399 4-68 (78)
10 d1zpva1 d.58.18.7 (A:1-83) UPF 96.5 0.0085 6.2E-07 45.6 9.6 68 318-400 2-69 (83)
11 d2f06a2 d.58.18.11 (A:1-70) Hy 95.8 0.02 1.5E-06 43.0 8.3 35 321-355 6-40 (70)
12 d2f06a1 d.58.18.11 (A:71-141) 95.4 0.015 1.1E-06 43.5 6.4 35 321-355 2-36 (71)
13 d1u8sa1 d.58.18.5 (A:2-87) put 94.9 0.072 5.2E-06 40.6 9.1 61 323-400 10-71 (86)
14 d1u8sa2 d.58.18.5 (A:88-180) p 93.6 0.2 1.5E-05 38.5 9.2 69 319-398 7-79 (93)
15 d1xt8a1 c.94.1.1 (A:10-257) Pu 92.8 0.63 4.6E-05 40.5 12.5 48 128-177 121-168 (248)
16 d1wdna_ c.94.1.1 (A:) Glutamin 91.6 2 0.00015 35.6 13.9 98 128-243 107-204 (223)
17 d2cdqa2 d.58.18.10 (A:329-419) 80.2 2.7 0.0002 32.0 7.4 64 325-408 23-90 (91)
18 d1tdja2 d.58.18.2 (A:336-423) 76.4 2.4 0.00017 32.5 5.9 65 319-401 4-68 (88)
19 d1xs5a_ c.94.1.1 (A:) Putative 75.8 4.2 0.00031 34.8 8.2 86 127-222 4-97 (240)
20 d1ii5a_ c.94.1.1 (A:) Glutamat 66.8 6.1 0.00044 32.5 6.9 46 128-177 117-162 (226)
21 d1o63a_ c.94.1.1 (A:) ATP phos 59.9 15 0.0011 31.7 8.4 144 129-291 2-166 (203)
22 d1wdna_ c.94.1.1 (A:) Glutamin 57.4 19 0.0014 29.0 8.4 125 141-282 30-161 (223)
23 d2ozza1 c.94.1.1 (A:1-228) Hyp 56.3 9.2 0.00067 32.6 6.3 47 128-177 110-159 (228)
24 d1nh8a1 c.94.1.1 (A:1-210) ATP 54.4 26 0.0019 30.4 9.0 123 152-291 44-174 (210)
25 d1ve4a1 c.94.1.1 (A:1-206) ATP 54.3 25 0.0018 30.3 8.9 146 123-288 1-170 (206)
26 d1ii5a_ c.94.1.1 (A:) Glutamat 53.7 51 0.0037 26.4 12.2 126 142-282 37-169 (226)
27 d2hmfa2 d.58.18.10 (A:404-470) 53.4 14 0.001 26.1 5.9 30 325-354 11-40 (67)
28 d1xt8a1 c.94.1.1 (A:10-257) Pu 52.5 23 0.0017 29.8 8.3 112 151-278 55-171 (248)
29 d2cdqa3 d.58.18.10 (A:420-494) 52.0 13 0.00091 27.1 5.5 57 319-398 4-60 (75)
30 d1us5a_ c.94.1.1 (A:) Putative 51.4 9.5 0.00069 33.6 5.7 49 129-178 117-172 (298)
31 d2hmfa3 d.58.18.10 (A:304-403) 50.6 8.2 0.0006 29.6 4.4 30 325-354 25-54 (100)
32 d1p99a_ c.94.1.1 (A:) Putative 47.1 6.3 0.00046 33.8 3.6 49 128-177 2-54 (255)
33 d1tdja3 d.58.18.2 (A:424-514) 44.9 6.8 0.00049 30.0 3.0 37 319-356 11-47 (91)
34 d3dhxa1 d.58.18.13 (A:2-100) M 39.6 16 0.0011 27.7 4.4 61 330-408 35-95 (99)
35 d2esna2 c.94.1.1 (A:92-303) Pr 39.1 1.9 0.00014 34.7 -1.2 34 146-179 32-66 (212)
36 d1al3a_ c.94.1.1 (A:) Cofactor 38.3 42 0.003 27.5 7.6 123 147-278 31-160 (237)
37 d2qswa1 d.58.18.13 (A:256-345) 37.6 15 0.0011 27.4 3.9 73 319-409 16-89 (90)
38 d1z7me1 c.94.1.1 (E:1-204) ATP 35.9 98 0.0072 26.2 9.8 144 127-289 1-173 (204)
39 d2qrra1 d.58.18.13 (A:2-98) Me 35.7 20 0.0014 27.0 4.4 61 330-408 34-94 (97)
40 d1xs5a_ c.94.1.1 (A:) Putative 35.6 30 0.0022 29.0 6.2 109 228-344 13-125 (240)
41 d2fyia1 c.94.1.1 (A:88-307) Ly 35.0 98 0.0071 24.3 14.7 113 147-277 31-159 (220)
42 d1pb7a_ c.94.1.1 (A:) N-methyl 34.6 9.9 0.00072 32.7 2.8 75 135-218 173-255 (289)
43 d1lsta_ c.94.1.1 (A:) Lysine-, 31.2 47 0.0034 26.7 6.6 47 128-176 112-160 (238)
44 d2abwa1 c.23.16.1 (A:2-219) Py 30.1 24 0.0018 29.0 4.6 46 126-177 1-49 (218)
45 d1utha_ c.94.1.1 (A:) LysR-typ 25.6 1.4E+02 0.01 23.0 8.6 144 117-282 4-168 (219)
46 d1lqla_ d.227.1.1 (A:) Hypothe 21.9 1E+02 0.0073 23.8 6.7 63 335-402 57-120 (141)
No 1
>d2qmwa1 c.94.1.1 (A:1-184) Prephenate dehydratase {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=2.1e-58 Score=425.80 Aligned_cols=177 Identities=25% Similarity=0.342 Sum_probs=166.9
Q ss_pred cEEEEeCCCccHHHHHHhhhCCC--CceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEE
Q 014547 128 LRVAYQGVPGAYSEAAAGKAYPN--CEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQ 205 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f~~--~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~ 205 (423)
|||+||||+|||||+||+++|++ .+++||.||++||++|++|++||||||||||++|+|.+|||+|.+++++|+||+.
T Consensus 1 mki~yLGp~GtfS~~Aa~~~f~~~~~~~~~~~s~~~v~~av~~~~~d~gvvPiENS~~G~V~~t~D~L~~~~~~I~~E~~ 80 (184)
T d2qmwa1 1 MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIR 80 (184)
T ss_dssp CEEEEECSTTSHHHHHHHHHCCTTSSEEEEESSHHHHHHHHHHCSSEEEEEEEESCSSSCSHHHHHHHHTTSSEEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHhcccCCceeeecCCHHHHHHHHHcCCCceeEEEeecccccchHHHHHhhhccCceeEeeec
Confidence 79999999999999999999984 5789999999999999999999999999999999999999999999999999999
Q ss_pred EeeeeeeeecCCCCcCcccEEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEEccHHHHHHcCCc
Q 014547 206 LPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELYGMQ 285 (423)
Q Consensus 206 lpI~h~Lla~~g~~l~dIk~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~AAelYgL~ 285 (423)
+||+|||+++++.++++|++||||||||+||++||++++|+ .+.++||++||+.+. ++.|||+|+.||++|||+
T Consensus 81 l~I~h~Ll~~~~~~l~~I~~V~SHpqal~QC~~~l~~~~~~--~~~~~sta~aa~~~~----~~~aAIas~~aa~~ygL~ 154 (184)
T d2qmwa1 81 LDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFD--YDYVDSTIQSLTKIE----NGVAAIAPLGSGEAYGFT 154 (184)
T ss_dssp EECCEEEECCSSCCSTTCCEEEECHHHHHHSHHHHHHTTCE--EEECSSHHHHHHTCB----TTEEEEEETTTSGGGTCC
T ss_pred ccchhhhcccccccccccceEEEecchHHHHHHHHHhhccc--hhhhhhHHHHHhhhh----hhhhccccHhHHHHcCCh
Confidence 99999999999999999999999999999999999999765 456899999987652 478999999999999999
Q ss_pred eeecCccCCCCCeeEEEEEeeCCCC
Q 014547 286 VLEDGIQDDSSNVTRFVMLAREPII 310 (423)
Q Consensus 286 ILa~nIqD~~~N~TRFlVLsr~~~~ 310 (423)
||+++|||.++|+|||+||+|++..
T Consensus 155 il~~~I~D~~~N~TRF~vi~~~~~~ 179 (184)
T d2qmwa1 155 PIDTHIEDYPHNVTRFLVIKNQQQF 179 (184)
T ss_dssp EEEECCCSCSCCEEEEEEEESCCCC
T ss_pred hhhhCCCCCCCCeEeEEEEecCCcC
Confidence 9999999999999999999998643
No 2
>d2qmwa2 d.58.18.3 (A:185-264) Prephenate dehydratase C-terminal domain {Staphylococcus aureus [TaxId: 1280]}
Probab=99.90 E-value=5.5e-24 Score=170.79 Aligned_cols=76 Identities=22% Similarity=0.437 Sum_probs=69.6
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHHhh
Q 014547 321 IVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEF 400 (423)
Q Consensus 321 ivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~~~ 400 (423)
+++...|+||+|+++|++|+++|||||||||||.++++ |+|.|||||+|+.+ ++++++|++|++.
T Consensus 5 ~i~~~~d~pGaL~~vL~~F~~~~INLt~IeSRP~~~~~--------------~~Y~F~id~~g~~~-~~~~~~l~~L~~~ 69 (80)
T d2qmwa2 5 LITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQL--------------GMYRFFVQADSAIT-TDIKKVIAILETL 69 (80)
T ss_dssp EEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSST--------------TCEEEEEEESCCSC-HHHHHHHHHHHHT
T ss_pred EEEeCCCCCCHHHHHHHHHHHCCCCEEEEEeeecCCCC--------------ceEEEEEEEecCCc-HHHHHHHHHHHHh
Confidence 44456789999999999999999999999999999865 99999999999875 4799999999999
Q ss_pred cCceEEEcccc
Q 014547 401 TSFLRVLGSYP 411 (423)
Q Consensus 401 ~~~vrvLGsYp 411 (423)
+.++|+||+|-
T Consensus 70 ~~~~kvLGsY~ 80 (80)
T d2qmwa2 70 DFKVEMIGAFN 80 (80)
T ss_dssp TEEEEEEEEEC
T ss_pred cCcEEEEEEeC
Confidence 99999999993
No 3
>d1phza1 d.58.18.3 (A:19-115) Phenylalanine hydroxylase N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.86 E-value=6.2e-22 Score=164.23 Aligned_cols=79 Identities=25% Similarity=0.343 Sum_probs=71.5
Q ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHH
Q 014547 315 RPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNAL 394 (423)
Q Consensus 315 ~~~KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL 394 (423)
..+||||+|+++|+||+|+++|++|+++|||||+|||||.++.+ |+|+|||||+|| .+++++.+|
T Consensus 13 ~~~ktSl~f~~~~~pGaL~~vL~~f~~~~INLt~IeSRP~~~~~--------------~~Y~F~id~eg~-~~~~i~~~l 77 (97)
T d1phza1 13 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNK--------------DEYEFFTYLDKR-TKPVLGSII 77 (97)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCT--------------TEEEEEECBCGG-GHHHHHHHH
T ss_pred CCCcEEEEEEeCCCCCHHHHHHHHHHHCCCCEEEEEeeccCCCC--------------ceEEEEEEcccC-ChHHHHHHH
Confidence 45799999999999999999999999999999999999999764 999999999998 578899999
Q ss_pred HHHHhhc-CceEEEc
Q 014547 395 AEVQEFT-SFLRVLG 408 (423)
Q Consensus 395 ~eL~~~~-~~vrvLG 408 (423)
++|+..+ ..|++|+
T Consensus 78 ~~L~~~~~~~v~~ls 92 (97)
T d1phza1 78 KSLRNDIGATVHELS 92 (97)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHHhhCcEEEEcc
Confidence 9998764 5677775
No 4
>d2f1fa1 d.58.18.6 (A:2-77) Acetolactate synthase small subunit, IlvH {Escherichia coli [TaxId: 562]}
Probab=97.17 E-value=0.0017 Score=50.06 Aligned_cols=72 Identities=14% Similarity=0.216 Sum_probs=57.4
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 318 KTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 318 KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
|.+|.+.+.|+||.|.++-..|+.||+|+..|-.-|.... .-..|-|-++| ++..+.+++++|
T Consensus 1 khtlsv~v~N~~GVL~RisglF~rRg~NI~Sl~v~~te~~---------------~iSR~tivv~~--~~~~i~qi~kQL 63 (76)
T d2f1fa1 1 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDP---------------TLSRMTIQTVG--DEKVLEQIEKQL 63 (76)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCS---------------SEEEEEEEEES--CHHHHHHHHHHH
T ss_pred CEEEEEEEECCCcHHHHHHHHHHhcCcceEEEEEcccCCC---------------CeeEEEEEEEC--CHHHHHHHHHHH
Confidence 4466777789999999999999999999999999998742 23466677777 567889999999
Q ss_pred HhhcCceEE
Q 014547 398 QEFTSFLRV 406 (423)
Q Consensus 398 ~~~~~~vrv 406 (423)
++.-.-++|
T Consensus 64 ~KlidV~~V 72 (76)
T d2f1fa1 64 HKLVDVLRV 72 (76)
T ss_dssp HHSTTEEEE
T ss_pred hCCCCEEEE
Confidence 987654443
No 5
>d2pc6a2 d.58.18.6 (A:1-77) Acetolactate synthase small subunit, IlvH {Nitrosomonas europaea [TaxId: 915]}
Probab=96.96 E-value=0.0027 Score=49.01 Aligned_cols=72 Identities=8% Similarity=0.182 Sum_probs=57.2
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 318 KTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 318 KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
|-+|.+-+.|+||.|.++-+.|+.||+|+..|--=|.... .-..+-|-++| ++..+.+++++|
T Consensus 2 k~tisv~veN~pGvL~Ris~lF~rRg~NI~Sltv~~te~~---------------~iSRmtivv~~--~~~~i~qi~kQL 64 (77)
T d2pc6a2 2 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDP---------------TLSRMTLVTNG--PDEIVEQITKQL 64 (77)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSST---------------TEEEEEEEEEE--CHHHHHHHHHHH
T ss_pred cEEEEEEEECCccHHHHHHHHHhccCcceEEEEEeccCCC---------------CeEEEEEEEEC--CHHHHHHHHHHH
Confidence 4466677789999999999999999999999999887642 23466666766 567899999999
Q ss_pred HhhcCceEE
Q 014547 398 QEFTSFLRV 406 (423)
Q Consensus 398 ~~~~~~vrv 406 (423)
++.-.-+++
T Consensus 65 ~KlvdVi~V 73 (77)
T d2pc6a2 65 NKLIEVVKL 73 (77)
T ss_dssp HHSTTEEEE
T ss_pred hCCcCEEEE
Confidence 988765554
No 6
>d2fgca2 d.58.18.6 (A:27-104) Acetolactate synthase small subunit, IlvH {Thermotoga maritima [TaxId: 2336]}
Probab=96.91 E-value=0.0031 Score=48.79 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=56.7
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 318 KTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 318 KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
|..|.+-+.|+||.|.++-+.|+.||+|+..|-.=|.... .-..+-|-++| ++..+.+++++|
T Consensus 3 ~~tisvlv~n~pGvL~Ri~~lF~rRg~NI~SL~v~~te~~---------------~iSR~tivv~g--~~~~i~qi~kQl 65 (78)
T d2fgca2 3 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETP---------------GLSRLVIMVKG--DDKTIEQIEKQA 65 (78)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSST---------------TEEEEEEEEEE--CTTHHHHHHHHH
T ss_pred eEEEEEEEeCCCcHHHHHHHHHhhCCcceEEEEEeecCCC---------------CeEEEEEEEEc--CHHHHHHHHHHH
Confidence 4566667789999999999999999999999998887642 24566677777 457789999999
Q ss_pred HhhcCceEE
Q 014547 398 QEFTSFLRV 406 (423)
Q Consensus 398 ~~~~~~vrv 406 (423)
++...-++|
T Consensus 66 ~KlidV~~V 74 (78)
T d2fgca2 66 YKLVEVVKV 74 (78)
T ss_dssp TTSTTEEEE
T ss_pred hCCcCEEEE
Confidence 887654444
No 7
>d1y7pa2 d.58.18.12 (A:2-78) Hypothetical protein AF1403, N-terminal domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.78 E-value=0.0019 Score=49.33 Aligned_cols=65 Identities=17% Similarity=0.105 Sum_probs=42.7
Q ss_pred EEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHHh
Q 014547 320 SIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQE 399 (423)
Q Consensus 320 Sivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~~ 399 (423)
.|-+...|+||.|.+++++|+.+++|+..|.++..+... ....|-|+++... ..+..++++|++
T Consensus 3 ~i~i~~~Dr~GlL~di~~~ia~~~~NI~~i~~~~~~~g~--------------~~~~~~i~v~~~~--~~l~~ll~kL~~ 66 (77)
T d1y7pa2 3 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGE--------------HEGKALIYFEIEG--GDFEKILERVKT 66 (77)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSST--------------TTTEEEEEEEECS--SCHHHHHHHHHT
T ss_pred eEEEEEecCCChHHHHHHHHHHcCCCeEEEEeeccCCCe--------------EEEEEEEEEEcCc--ccHHHHHHHHHc
Confidence 466777899999999999999999999999988655421 2334445544321 136778888876
Q ss_pred h
Q 014547 400 F 400 (423)
Q Consensus 400 ~ 400 (423)
.
T Consensus 67 l 67 (77)
T d1y7pa2 67 F 67 (77)
T ss_dssp C
T ss_pred C
Confidence 4
No 8
>d1sc6a3 d.58.18.1 (A:327-410) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Escherichia coli [TaxId: 562]}
Probab=96.74 E-value=0.0064 Score=46.82 Aligned_cols=65 Identities=22% Similarity=0.317 Sum_probs=50.3
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 318 KTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 318 KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
...|++...|+||.|.++-+.|+++|||+..+.+..... ..|. .+|++. +++..++++++|
T Consensus 11 ~~rl~i~~~d~PGvla~I~~~l~~~~iNI~~~~~~~~~~----------------~~~a-~~~i~~--D~~~~~~v~~~i 71 (84)
T d1sc6a3 11 GRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQ----------------MGYV-VIDIEA--DEDVAEKALQAM 71 (84)
T ss_dssp SEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSS----------------EEEE-EEEEEC--CHHHHHHHHHHH
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHcCCCHHHhccccCCC----------------CcEE-EEEEEC--CCCCHHHHHHHH
Confidence 467888889999999999999999999999988765432 3465 577775 456667788888
Q ss_pred Hhhc
Q 014547 398 QEFT 401 (423)
Q Consensus 398 ~~~~ 401 (423)
++.-
T Consensus 72 ~~l~ 75 (84)
T d1sc6a3 72 KAIP 75 (84)
T ss_dssp HTST
T ss_pred HCCC
Confidence 7643
No 9
>d1ygya3 d.58.18.1 (A:452-529) Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.58 E-value=0.0072 Score=46.08 Aligned_cols=64 Identities=6% Similarity=0.097 Sum_probs=47.0
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceeeeeee-eeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 319 TSIVFAHDKGTSVLFKVLSAFAFRNISLTKIES-RPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 319 TSivf~l~~~pGaL~~vL~~Fa~~~INLtkIES-RP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
+.|++...|+||.|.++-+.|+++|||+..+.- |..++ ..-+..+++++... +.+.+.|+++
T Consensus 4 ~~L~i~~~D~PGvi~~I~~~l~~~~iNI~~m~~~~~~~g----------------~~a~~vi~vD~~~~-~~vl~~I~~~ 66 (78)
T d1ygya3 4 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEG----------------PGATILLRLDQDVP-DDVRTAIAAA 66 (78)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSS----------------SCEEEEEEESSCCC-HHHHHHHHHH
T ss_pred eEEEEEeCCcCCHHHHHHHHHHhcCcChhhheeeecCCC----------------CeEEEEEEcCCCcc-HHHHHHHHcC
Confidence 568888999999999999999999999999864 55543 13455778887654 4444555555
Q ss_pred Hh
Q 014547 398 QE 399 (423)
Q Consensus 398 ~~ 399 (423)
..
T Consensus 67 ~~ 68 (78)
T d1ygya3 67 VD 68 (78)
T ss_dssp HT
T ss_pred CC
Confidence 43
No 10
>d1zpva1 d.58.18.7 (A:1-83) UPF0237 protein SP0238 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=96.49 E-value=0.0085 Score=45.62 Aligned_cols=68 Identities=12% Similarity=0.109 Sum_probs=51.8
Q ss_pred eEEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 318 KTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 318 KTSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
|.-|.+.-+|+||.++++-+.++.+|+|+..++.....+ .|-..+.+++++..+-+.+++.|+.|
T Consensus 2 k~vitv~g~DrpGiVa~vt~~l~~~g~NI~d~~q~~~~~---------------~f~~~~~v~~~~~~~~~~l~~~l~~l 66 (83)
T d1zpva1 2 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDE---------------YFTMMAVVSSDEKQDFTYLRNEFEAF 66 (83)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETT---------------EEEEEEEEEESSCCCHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHHCCCeEEEEEeEEeCC---------------EEEEEEEEEEecCCCHHHHHHHHHHH
Confidence 444556678999999999999999999999998765432 24556666776666667888888888
Q ss_pred Hhh
Q 014547 398 QEF 400 (423)
Q Consensus 398 ~~~ 400 (423)
.+.
T Consensus 67 a~~ 69 (83)
T d1zpva1 67 GQT 69 (83)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 11
>d2f06a2 d.58.18.11 (A:1-70) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.80 E-value=0.02 Score=42.96 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=31.0
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCC
Q 014547 321 IVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHR 355 (423)
Q Consensus 321 ivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~ 355 (423)
|.+-++|+||.|.++.+.|+++|||+..|---++.
T Consensus 6 isV~~eNkpG~L~~v~~~~~~~~inI~sl~v~~t~ 40 (70)
T d2f06a2 6 LSIFLENKSGRLTEVTEVLAKENINLSALCIAENA 40 (70)
T ss_dssp EEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECS
T ss_pred EEEEEeCCCcHHHHHHHHHHHCCCCEEEEEEeecC
Confidence 55567899999999999999999999999887765
No 12
>d2f06a1 d.58.18.11 (A:71-141) Hypothetical protein BT0572 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=95.44 E-value=0.015 Score=43.52 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=31.1
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCC
Q 014547 321 IVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHR 355 (423)
Q Consensus 321 ivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~ 355 (423)
|.+.++|+||.|.++++.|+++|||+..+..-+++
T Consensus 2 iaV~v~d~pG~L~~v~~~L~~~~InI~~~y~~~~~ 36 (71)
T d2f06a1 2 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANN 36 (71)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEET
T ss_pred EEEEecCCccHHHHHHHHHHHCCCCEEEEEEEcCC
Confidence 45678999999999999999999999998887764
No 13
>d1u8sa1 d.58.18.5 (A:2-87) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=94.90 E-value=0.072 Score=40.64 Aligned_cols=61 Identities=8% Similarity=0.064 Sum_probs=42.4
Q ss_pred EEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcC-hHHHHHHHHHHHhh
Q 014547 323 FAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMA-EVRAQNALAEVQEF 400 (423)
Q Consensus 323 f~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~-d~~v~~aL~eL~~~ 400 (423)
+.-+|+||.+.++-+.++++|+|+..+......+ ++.+.+.+++..+ -+++++.|++|.+.
T Consensus 10 v~G~DrpGiva~vt~~l~~~g~NI~d~~~~~~~~-----------------~~~~~~~v~~~~~~~~~l~~~L~~l~~~ 71 (86)
T d1u8sa1 10 AVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGK-----------------EFTLLMLISGSPSNITRVETTLPLLGQQ 71 (86)
T ss_dssp EEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETT-----------------EEEEEEEEEECHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHHHHHCCCeEEEeEeEEECC-----------------eeEEEEEEEcCcccHHHHHHHHHHHHHH
Confidence 3448999999999999999999998776654432 3444444444322 25777777777653
No 14
>d1u8sa2 d.58.18.5 (A:88-180) putative transcriptional repressor VC2159 {Vibrio cholerae [TaxId: 666]}
Probab=93.56 E-value=0.2 Score=38.49 Aligned_cols=69 Identities=13% Similarity=0.156 Sum_probs=44.6
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEe----cCcChHHHHHHH
Q 014547 319 TSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFE----ASMAEVRAQNAL 394 (423)
Q Consensus 319 TSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~e----g~~~d~~v~~aL 394 (423)
..+.+.-+|+||-+.++-+.|+.+|+|+..+.++-....- ++. ..-.|++.+. ...+-..+++.+
T Consensus 7 v~v~v~g~DrpGIV~~it~~la~~~~nI~~l~t~~~~a~~----~~~-------~~~~f~~~~~~~~p~~~~~~~l~~~l 75 (93)
T d1u8sa2 7 VEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDK----LHS-------EQNQFHIAISARVDSGCNLMQLQEEF 75 (93)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC-------------------CEEEEEEEEEECTTSCHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHHcCCCchhhhcccccccC----Ccc-------cCccEEEEEEEEcCccccHHHHHHHH
Confidence 4466677899999999999999999999999886432110 000 1124555443 334446777777
Q ss_pred HHHH
Q 014547 395 AEVQ 398 (423)
Q Consensus 395 ~eL~ 398 (423)
++|.
T Consensus 76 ~~l~ 79 (93)
T d1u8sa2 76 DALC 79 (93)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7765
No 15
>d1xt8a1 c.94.1.1 (A:10-257) Putative amino-acid transporter CjaA {Campylobacter jejuni [TaxId: 197]}
Probab=92.79 E-value=0.63 Score=40.47 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=41.6
Q ss_pred cEEEEeCCCccHHHHHHhhhCCCCceeecCCHHHHHHHHHcCCcCeEEEe
Q 014547 128 LRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLP 177 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVP 177 (423)
.+|+++ .|++.++...+.+++.+++.+++.++++++|.+|++|+.+..
T Consensus 121 ~~i~v~--~gs~~~~~l~~~~~~~~i~~~~s~~~~~~~l~~g~vD~~i~~ 168 (248)
T d1xt8a1 121 KTLLLN--KGTTADAYFTQNYPNIKTLKYDQNTETFAALMDKRGDALSHD 168 (248)
T ss_dssp SEEEEE--TTSHHHHHHHHHCTTSEEEEESSHHHHHHHHHTTSSSEEEEE
T ss_pred ceeeec--CCChHHHhhhccccccccccccchhhHHHhhccccccccccc
Confidence 478875 567888888888899999999999999999999999977764
No 16
>d1wdna_ c.94.1.1 (A:) Glutamine-binding protein {Escherichia coli [TaxId: 562]}
Probab=91.59 E-value=2 Score=35.57 Aligned_cols=98 Identities=14% Similarity=0.045 Sum_probs=67.6
Q ss_pred cEEEEeCCCccHHHHHHhhhCCCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEe
Q 014547 128 LRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLP 207 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lp 207 (423)
.+|++. .|+..+....+.+++.++..+.+.++++.+|..|++|+.+..-. .+...+.......+.++++..-+
T Consensus 107 ~~v~v~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~vD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 179 (223)
T d1wdna_ 107 KVVAVK--SGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTP-----NILYFIKTAGNGQFKAVGDSLEA 179 (223)
T ss_dssp CEEEEE--TTSHHHHHHHHHCCCSEEEEESSHHHHHHHHHTTSCSEEEEEHH-----HHHHHHHTTTTTTEEEEEEEEEE
T ss_pred CEEEEE--eecchhhhhhhhccccceeeeCCHHHHHHHHhcCCccccccccH-----HhhhhhhhcCCCcceecCCCCCc
Confidence 478875 58777777777788889999999999999999999999887522 11111111222468888887777
Q ss_pred eeeeeeecCCCCcCcccEEEechhHHHHHHHHHHHc
Q 014547 208 VHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKL 243 (423)
Q Consensus 208 I~h~Lla~~g~~l~dIk~VySHPqAL~QC~~fL~~~ 243 (423)
...+++.+++ +|.-..+-.++|++.
T Consensus 180 ~~~~~~~~k~-----------~~~l~~~in~~i~~~ 204 (223)
T d1wdna_ 180 QQYGIAFPKG-----------SDELRDKVNGALKTL 204 (223)
T ss_dssp EEEEEEECTT-----------CHHHHHHHHHHHHHH
T ss_pred ceEEEEEECC-----------CHHHHHHHHHHHHHH
Confidence 7777766542 355556666666553
No 17
>d2cdqa2 d.58.18.10 (A:329-419) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=80.18 E-value=2.7 Score=32.01 Aligned_cols=64 Identities=16% Similarity=0.213 Sum_probs=46.0
Q ss_pred eCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEec----CcChHHHHHHHHHHHhh
Q 014547 325 HDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEA----SMAEVRAQNALAEVQEF 400 (423)
Q Consensus 325 l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg----~~~d~~v~~aL~eL~~~ 400 (423)
..++||.+.++.+.|+++|||+.-|-+-. -...|.||-+. ......+..++++|++.
T Consensus 23 m~~~~G~~a~if~~La~~~Inv~~Is~Se-------------------~~is~~v~~~~~~~a~~~~~~~~~~~~el~~i 83 (91)
T d2cdqa2 23 MLGQVGFLAKVFSIFEELGISVDVVATSE-------------------VSISLTLDPSKLWSRELIQQELDHVVEELEKI 83 (91)
T ss_dssp GTTCTTHHHHHHHHHHHTTCCEEEEEEET-------------------TEEEEEECCGGGSSSCCCHHHHHHHHHHHTTT
T ss_pred CCCCccHHHHHHHHHHHcCCcEEEEEecC-------------------CeEEEEEchhHHHHHHHHHHHHHHHHHHHhCC
Confidence 46799999999999999999999997621 25778886432 12335677788888655
Q ss_pred cCceEEEc
Q 014547 401 TSFLRVLG 408 (423)
Q Consensus 401 ~~~vrvLG 408 (423)
+ .|.+.+
T Consensus 84 a-~VsVv~ 90 (91)
T d2cdqa2 84 A-VVNLLK 90 (91)
T ss_dssp S-EEEEEE
T ss_pred c-eEEEee
Confidence 4 566653
No 18
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=76.44 E-value=2.4 Score=32.48 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=45.9
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHH
Q 014547 319 TSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQ 398 (423)
Q Consensus 319 TSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~ 398 (423)
.-+.+++|.+||+|.+.++.+..+ |+|-..=|-+... .=..||-++-.......+++++.|+
T Consensus 4 ~l~~v~iPErpGaf~~F~~~lg~~--nITeF~YR~~~~~----------------~a~VlvGi~~~~~~~e~~~l~~~L~ 65 (88)
T d1tdja2 4 ALLAVTIPEEKGSFLKFCQLLGGR--SVTEFNYRFADAK----------------NACIFVGVRLSRGLEERKEILQMLN 65 (88)
T ss_dssp EEEEEECCBSSSCSHHHHHTTSSS--EEEEEEEECCCSS----------------BCEEEEEEECSSTHHHHHHHHHHHT
T ss_pred EEEEEEcCCCccHHHHHHHhcCcC--ceEEEEEEccCCC----------------CeEEEEEEEecCcchhHHHHHHHHH
Confidence 457789999999999999999754 8887777876532 1244555554333466778888887
Q ss_pred hhc
Q 014547 399 EFT 401 (423)
Q Consensus 399 ~~~ 401 (423)
+..
T Consensus 66 ~~G 68 (88)
T d1tdja2 66 DGG 68 (88)
T ss_dssp SSS
T ss_pred HCC
Confidence 654
No 19
>d1xs5a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Treponema pallidum [TaxId: 160]}
Probab=75.77 E-value=4.2 Score=34.81 Aligned_cols=86 Identities=10% Similarity=-0.022 Sum_probs=54.1
Q ss_pred ccEEEEeCCCccHHHHH--HhhhCC----CCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHh--hcCCc
Q 014547 127 QLRVAYQGVPGAYSEAA--AGKAYP----NCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL--LRHRL 198 (423)
Q Consensus 127 ~~~VayLGP~GTfSh~A--A~~~f~----~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL--~~~~L 198 (423)
..||||++ |+.++.. +.++|. +++++.+.+..+..+|+..|++|.+.+- ........- ....+
T Consensus 4 ti~ig~~~--~~~~~~l~~~k~~~k~~Gi~Ve~v~f~~g~~~~~Al~~G~iD~~~~~-------~~~~l~~~~~~~~~~i 74 (240)
T d1xs5a_ 4 TVGVGVLS--EPHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGDILMNFFQ-------HVPHMQQFNQEHNGDL 74 (240)
T ss_dssp EEEEEECS--TTHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTSSSEEEEE-------EHHHHHHHHHHHTCCE
T ss_pred eEEEEecC--CCcHHHHHHHHHHHHHcCCEEEEEEeCChhhHHHHHHcCCcceeccC-------CHHHHHHHHHhCCCcE
Confidence 57999996 5566642 344553 4689999999999999999999988653 222211111 23456
Q ss_pred EEEEEEEEeeeeeeeecCCCCcCc
Q 014547 199 HIVGEVQLPVHHCLLALPGVRKEY 222 (423)
Q Consensus 199 ~IvgEi~lpI~h~Lla~~g~~l~d 222 (423)
.+++..... ...|.+.++.++.+
T Consensus 75 ~~v~~~~~~-~~~l~~~~~~s~~d 97 (240)
T d1xs5a_ 75 VSVGNVHVE-PLALYSRTYRHVSD 97 (240)
T ss_dssp EEEEEEEEC-CCEEECSSCCSGGG
T ss_pred EEeeccccC-ceEEEecCCCChhh
Confidence 666654433 34566666555444
No 20
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=66.80 E-value=6.1 Score=32.54 Aligned_cols=46 Identities=9% Similarity=0.063 Sum_probs=36.1
Q ss_pred cEEEEeCCCccHHHHHHhhhCCCCceeecCCHHHHHHHHHcCCcCeEEEe
Q 014547 128 LRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLP 177 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVP 177 (423)
.+|++. .|+..+.... ++..+++++++.++++++|.+|++|+.+..
T Consensus 117 ~~i~~~--~g~~~~~~~~--~~~~~i~~~~~~~~~~~~l~~g~~d~~~~~ 162 (226)
T d1ii5a_ 117 KEVAVV--RDTTAVDWAN--FYQADVRETNNLTAAITLLQKKQVEAVMFD 162 (226)
T ss_dssp CEEEEE--TTSHHHHHHH--HTTCEEEEESSHHHHHHHHHTTSCSEEEEE
T ss_pred hccccc--cCchhhhccc--cccceeeccchHHHHHHHHhCCCeeeEecc
Confidence 478875 5666665543 346788999999999999999999988764
No 21
>d1o63a_ c.94.1.1 (A:) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=59.92 E-value=15 Score=31.73 Aligned_cols=144 Identities=13% Similarity=0.101 Sum_probs=88.6
Q ss_pred EEEEeCCCccHHHHHHhhh------C----------CCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHH
Q 014547 129 RVAYQGVPGAYSEAAAGKA------Y----------PNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDL 192 (423)
Q Consensus 129 ~VayLGP~GTfSh~AA~~~------f----------~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDl 192 (423)
|||.. +|.-.+.+..-+ + ++.+++.. .-.|+-.-|+.|.+|+||+= +|+
T Consensus 2 ~iAlp--KGRL~~~~~~ll~~aGi~~~r~~~~~~~~~~i~~~~~-r~~DIp~~V~~G~~DlGI~G------------~D~ 66 (203)
T d1o63a_ 2 KLAIP--KGRLEEKVMTYLKKTGVIFERESSILREGKDIVCFMV-RPFDVPTYLVHGVADIGFCG------------TDV 66 (203)
T ss_dssp EEEEE--CSTTHHHHHHHHHHHTCCEEEECSSEEEETTEEEEEE-CGGGHHHHHHTTSCSEEEEE------------HHH
T ss_pred eEEec--CcccHHHHHHHHHHCCCCcccccccccCCCCeEEEEe-cchhhhHHHHhcccccccch------------HHH
Confidence 56654 777777665422 0 12333433 56788899999999999874 576
Q ss_pred hhcCCcEEEEEEEEeeeee---eeecCCCCcCc-ccEEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCC
Q 014547 193 LLRHRLHIVGEVQLPVHHC---LLALPGVRKEY-LTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLR 268 (423)
Q Consensus 193 L~~~~L~IvgEi~lpI~h~---Lla~~g~~l~d-Ik~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~ 268 (423)
|.+.+-.+.--..|+...| ++++.+....+ -++|.+-..-+.+ +|+++++.+++++..+-..|.|-.+--. .
T Consensus 67 l~E~~~~v~~~~~L~~g~~~l~vA~p~~~~~~~~~~rIATkYpnlt~--~f~~~~gi~~~ii~l~GavE~Ap~~G~A--D 142 (203)
T d1o63a_ 67 LLEKETSLIQPFFIPTNISRMVLAGPKGRGIPEGEKRIATKFPNVTQ--RYCESKGWHCRIIPLKGSVELAPIAGLS--D 142 (203)
T ss_dssp HHHSCCCCBCCSEEEEEEEEEEEEEETTTCCCSSCEEEEESCHHHHH--HHHHHHTCCEEEEECSSCTTHHHHHTSC--S
T ss_pred HhhhcccceeeeecceeeeEEEEecccccccccccceeeechhhHHH--HHHHHccCceEEEeccCCCCCCcccccc--c
Confidence 6665444444445677777 44444332221 2478888887765 8999998888888765544443332111 1
Q ss_pred CeeEE-ccHHHHHHcCCceeecCc
Q 014547 269 DTAAI-ASARAAELYGMQVLEDGI 291 (423)
Q Consensus 269 ~~AAI-aS~~AAelYgL~ILa~nI 291 (423)
-.+=| .+-...+.+||+++..-+
T Consensus 143 ~IvDivsTG~TLk~NgLk~i~~i~ 166 (203)
T d1o63a_ 143 LIVDITETGRTLKENNLEILDEIF 166 (203)
T ss_dssp EEEEEESSSHHHHHTTEEEEEEEE
T ss_pred eeeeeccchHHHHHCCCEEcccee
Confidence 12223 445677899999987644
No 22
>d1wdna_ c.94.1.1 (A:) Glutamine-binding protein {Escherichia coli [TaxId: 562]}
Probab=57.41 E-value=19 Score=29.04 Aligned_cols=125 Identities=11% Similarity=0.021 Sum_probs=69.8
Q ss_pred HHHHhhhCCCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHh-hcCCcEEEEEEEEeeeeeeeecCCC-
Q 014547 141 EAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL-LRHRLHIVGEVQLPVHHCLLALPGV- 218 (423)
Q Consensus 141 h~AA~~~f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL-~~~~L~IvgEi~lpI~h~Lla~~g~- 218 (423)
++.+.+.--+.++++. ++..++.+|++|++|+++-++..+ .+-.+.+ ....+. ...+.++.+++.
T Consensus 30 ~~i~~~~g~~~~~~~~-~~~~~~~~l~~g~~D~~~~~~~~~-----~~r~~~~~~s~p~~-------~~~~~~~~~~~~~ 96 (223)
T d1wdna_ 30 AAIAKELKLDYELKPM-DFSGIIPALQTKNVDLALAGITIT-----DERKKAIDFSDGYY-------KSGLLVMVKANNN 96 (223)
T ss_dssp HHHHHHHTCCEEEEEE-CGGGHHHHHHTTSSSEEEEEEECC-----HHHHTTSEECSCCE-------EEEEEEEEETTCC
T ss_pred HHHHHHhCCcEEEEec-CHHHHHhhhhhccceeeecccccc-----hhhhcceEecccEE-------EeeeEEEEECCCC
Confidence 3334333225677775 578899999999999876433211 1111111 112222 223344444321
Q ss_pred ---CcCccc--EEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEEccHHHHHHc
Q 014547 219 ---RKEYLT--RVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELY 282 (423)
Q Consensus 219 ---~l~dIk--~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~AAelY 282 (423)
++++++ +|.. ...-.. ..|+.+..++..+..+.+..++.+++..+ +-.+++++...+..+
T Consensus 97 ~i~~~~dl~~~~v~v-~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g--~vD~~~~~~~~~~~~ 161 (223)
T d1wdna_ 97 DVKSVKDLDGKVVAV-KSGTGS-VDYAKANIKTKDLRQFPNIDNAYMELGTN--RADAVLHDTPNILYF 161 (223)
T ss_dssp SCSSSTTTTTCEEEE-ETTSHH-HHHHHHHCCCSEEEEESSHHHHHHHHHTT--SCSEEEEEHHHHHHH
T ss_pred CCCCHHHHCCCEEEE-Eeecch-hhhhhhhccccceeeeCCHHHHHHHHhcC--CccccccccHHhhhh
Confidence 234433 2322 222222 35777777888888888889999988765 456788777655544
No 23
>d2ozza1 c.94.1.1 (A:1-228) Hypothetical protein YhfZ {Shigella flexneri [TaxId: 623]}
Probab=56.27 E-value=9.2 Score=32.60 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=37.0
Q ss_pred cEEEEeCCCccHHHHHHhhhC-C--CCceeecCCHHHHHHHHHcCCcCeEEEe
Q 014547 128 LRVAYQGVPGAYSEAAAGKAY-P--NCEAIPCDQFEVAFQAVELWIADRAVLP 177 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f-~--~~e~vp~~Sf~~Vf~aV~~g~~d~gVVP 177 (423)
+|||+ +.||.+|.+..+.. . +++++..+ ..+++.++.+|++|.++.+
T Consensus 110 k~vgv--~~~s~~~~~l~~~~~~~~~v~~v~~~-~~~~~~al~~G~vDa~v~~ 159 (228)
T d2ozza1 110 KRVGL--DSRSADQKIMTDVFFGDSDVERVDLS-YHESLQRIVKGDVDAVIWN 159 (228)
T ss_dssp CEEEE--CTTCHHHHHHHHHHHTTSCCEEEECC-HHHHHHHHHHTSCCEEEEE
T ss_pred CEEEe--cCCChHHHHHHHcCCCccceEEEeCC-HHHHHHHHHcCceeEEEeC
Confidence 48998 68999998766542 2 56777775 8899999999999987654
No 24
>d1nh8a1 c.94.1.1 (A:1-210) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.37 E-value=26 Score=30.39 Aligned_cols=123 Identities=13% Similarity=0.054 Sum_probs=77.8
Q ss_pred ceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEeeeee---eeecCCCC--cCc--cc
Q 014547 152 EAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHC---LLALPGVR--KEY--LT 224 (423)
Q Consensus 152 e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lpI~h~---Lla~~g~~--l~d--Ik 224 (423)
+++.. --.|+-.-|+.|.+|+||+= +|.|.+++-.|+--..|+..+| ++++++.. ..+ =.
T Consensus 44 ~v~~~-R~~DIp~~V~~G~~DlGI~G------------~D~l~E~~~~v~~~~dL~fG~c~l~vA~p~~~~~~~~~l~~~ 110 (210)
T d1nh8a1 44 EFFFL-RPKDIAIYVGSGELDFGITG------------RDLVCDSGAQVRERLALGFGSSSFRYAAPAGRNWTTADLAGM 110 (210)
T ss_dssp EEEEE-CGGGHHHHHHHSSCSEEEEE------------HHHHHHHTCCEEEEEECSCCCEEEEEEEETTSCCCGGGGTTC
T ss_pred EEEEe-CHHHHHHHHHhccCceeeec------------HHHHhhcccchhhhhcccccceEEEEEeecCCCCChhhhcCC
Confidence 34444 35678899999999999873 5777765555666677888777 33444322 111 14
Q ss_pred EEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEE-ccHHHHHHcCCceeecCc
Q 014547 225 RVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAI-ASARAAELYGMQVLEDGI 291 (423)
Q Consensus 225 ~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAI-aS~~AAelYgL~ILa~nI 291 (423)
+|.+-..-+. ++|+.+++.+++++..+-..|+|-.+ +-..-.+=| .+-...+.+||+++.+-+
T Consensus 111 rIATkYpnit--~~ff~~~gi~~~ii~~~Ga~E~ap~~--g~AD~IvDiv~TG~TLk~N~L~~i~~~l 174 (210)
T d1nh8a1 111 RIATAYPNLV--RKDLATKGIEATVIRLDGAVEISVQL--GVADAIADVVGSGRTLSQHDLVAFGEPL 174 (210)
T ss_dssp EEEESCHHHH--HHHHHHHTCCCEEEECSSCCTHHHHT--TSCSEEEEEESSSHHHHHTTEEEEEEEE
T ss_pred EEeeehHHHH--HHHHHHcCCceeEEEEecCccccccC--CcceEEEeeeccHHHHHHCCCEEcchhh
Confidence 6777666554 67999998888888766555544331 100112222 456678899999997644
No 25
>d1ve4a1 c.94.1.1 (A:1-206) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=54.30 E-value=25 Score=30.32 Aligned_cols=146 Identities=19% Similarity=0.158 Sum_probs=93.4
Q ss_pred CCCCccEEEEeCCCccHHHHHHhhh------CCC--------------CceeecCCHHHHHHHHHcCCcCeEEEeeccCC
Q 014547 123 MHGSQLRVAYQGVPGAYSEAAAGKA------YPN--------------CEAIPCDQFEVAFQAVELWIADRAVLPVENSL 182 (423)
Q Consensus 123 ~~~~~~~VayLGP~GTfSh~AA~~~------f~~--------------~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~ 182 (423)
|.+.+.+||. |+|.=.+++..-+ +.+ .+++ .---.|+-.-|+.|.+|+|++=
T Consensus 1 m~~~~l~iAl--PKGRL~~~~~~ll~~~Gi~~~~~~~rr~~~~~~~~~i~~~-~vR~~DIp~~V~~G~~DlGItG----- 72 (206)
T d1ve4a1 1 MRRFALTVAL--PKGRMFREAYEVLKRAGLDLPEVEGERTLLHGKEGGVALL-ELRNKDVPIYVDLGIAEIGVVG----- 72 (206)
T ss_dssp CTTSSEEEEE--ECSTTHHHHHHHHHHTTCCCCCC-----CEECCTTSEEEE-EECGGGHHHHHHTTSSSEEEEE-----
T ss_pred CCcccEEEEe--cccccHHHHHHHHHHCCCCCccCCCceeEeccCCCCEEEE-EechHHHHHHHhhhhcceeeec-----
Confidence 4455778888 5898888776422 111 1122 2234578899999999999873
Q ss_pred CCchHHHHHHhhcCCcEEEEEEEEeeeeee--eecCCCCcCcccEEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHH
Q 014547 183 GGSIHRNYDLLLRHRLHIVGEVQLPVHHCL--LALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAE 260 (423)
Q Consensus 183 ~G~V~~tlDlL~~~~L~IvgEi~lpI~h~L--la~~g~~l~dIk~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~ 260 (423)
.|.|.+++-.+.--..|...+|= ++.+..+..+.++|.+-..-+ .++|+++++.+++++..+-..+.|-
T Consensus 73 -------~D~l~E~~~~v~~l~dL~fG~crl~va~~~~~~~~~~rIATkYpni--t~~~~~~~gi~~~ii~~~Gs~E~ap 143 (206)
T d1ve4a1 73 -------KDVLLDSGRDLFEPVDLGFGACRLSLIRRPGDTGPIRRVATKYPNF--TARLLKERGWAADVVELSGNIELAA 143 (206)
T ss_dssp -------HHHHHHCCSCCEEEEECCCSCEEEEEEECTTCCSCCCEEEESCHHH--HHHHHHHTTCCCEEEECSSCTHHHH
T ss_pred -------ceeeEecCCCccCccceEEECeEEEEEEEeeccCCccEeeHHHHHH--HHHHHHhcCCcceEEEEEccccccc
Confidence 46777766555555678888882 234444667788999976654 6899999988887766544333332
Q ss_pred HHHhcCCCC-eeEE-ccHHHHHHcCCceee
Q 014547 261 YIAANDLRD-TAAI-ASARAAELYGMQVLE 288 (423)
Q Consensus 261 ~va~~~~~~-~AAI-aS~~AAelYgL~ILa 288 (423)
. -+.-+ ..=| .+-..-+.+||+++.
T Consensus 144 ~---~g~AD~IvDiv~TG~TLk~N~L~~i~ 170 (206)
T d1ve4a1 144 V---TGLADAVVDVVQTGATLRAAGLVEVE 170 (206)
T ss_dssp H---TTSSSEEEEEESSSHHHHHTTCEEEE
T ss_pred C---CCccceeEEeecCHHHHHHCCCEeee
Confidence 2 11112 2223 445667899999885
No 26
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=53.66 E-value=51 Score=26.41 Aligned_cols=126 Identities=13% Similarity=0.029 Sum_probs=68.7
Q ss_pred HHHhhhCCCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEeeeeeeeecCCC---
Q 014547 142 AAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGV--- 218 (423)
Q Consensus 142 ~AA~~~f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lpI~h~Lla~~g~--- 218 (423)
+.+.+.--+.+++.+.++.++++++++|++|..+-.+--+ +--+.+. .+. ..+-++....+++.+++.
T Consensus 37 ~ia~~~g~~~~~v~~~~~~~~~~~l~~G~~D~~~~~~~~t------~~r~~~~--~~~-fs~p~~~~~~~~~~~~~~~~~ 107 (226)
T d1ii5a_ 37 AVAESQKWNSEYVRQNSISAGITAVAEGELDILIGPISVT------PERAAIE--GIT-FTQPYFSSGIGLLIPGTATPL 107 (226)
T ss_dssp HHHHHHTCCEEEEECSCHHHHHHHHHTTSCSEEEEEEECC------HHHHTST--TEE-ECCCCEEEEEEEEEEGGGTTT
T ss_pred HHHHHhCCCeEEEEcCCHHHHHHHHhcCCcccccccccch------hhhhhhh--ccc-ccccccccCcceEEEeccccc
Confidence 3344333356778899999999999999999875333211 1111111 111 111122334455544322
Q ss_pred --CcCccc--EEEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEEccHHHHHHc
Q 014547 219 --RKEYLT--RVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELY 282 (423)
Q Consensus 219 --~l~dIk--~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~AAelY 282 (423)
++++++ +|........ ..+++.. +.+++.+.|..++.+++..+ +-.++|.....+..+
T Consensus 108 ~~~~~dl~~~~i~~~~g~~~--~~~~~~~--~~~i~~~~~~~~~~~~l~~g--~~d~~~~~~~~~~~~ 169 (226)
T d1ii5a_ 108 FRSVGDLKNKEVAVVRDTTA--VDWANFY--QADVRETNNLTAAITLLQKK--QVEAVMFDRPALIYY 169 (226)
T ss_dssp CSSGGGGTTCEEEEETTSHH--HHHHHHT--TCEEEEESSHHHHHHHHHTT--SCSEEEEEHHHHHHH
T ss_pred chhhhhhhhhccccccCchh--hhccccc--cceeeccchHHHHHHHHhCC--CeeeEeccchhHHHH
Confidence 122222 3333332221 3566654 45677888999999999876 456777776655544
No 27
>d2hmfa2 d.58.18.10 (A:404-470) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=53.44 E-value=14 Score=26.13 Aligned_cols=30 Identities=10% Similarity=0.110 Sum_probs=25.7
Q ss_pred eCCCccHHHHHHHHHHhCCceeeeeeeeeC
Q 014547 325 HDKGTSVLFKVLSAFAFRNISLTKIESRPH 354 (423)
Q Consensus 325 l~~~pGaL~~vL~~Fa~~~INLtkIESRP~ 354 (423)
+.++||.+.++++.+++.|||+..|-.=++
T Consensus 11 m~~~~gi~arif~~L~~~~InV~mIsq~~S 40 (67)
T d2hmfa2 11 MRGAKGIAGKIFTAVSESGANIKMIAQGSS 40 (67)
T ss_dssp TTTCTTHHHHHHHHHHHTTCCCCEEEESSC
T ss_pred CCCCccHHHHHHHHHHHcCCChHHeeecCc
Confidence 567899999999999999999998874433
No 28
>d1xt8a1 c.94.1.1 (A:10-257) Putative amino-acid transporter CjaA {Campylobacter jejuni [TaxId: 197]}
Probab=52.47 E-value=23 Score=29.81 Aligned_cols=112 Identities=8% Similarity=-0.001 Sum_probs=65.0
Q ss_pred CceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEeeeeeeeecCCCCc---Cccc--E
Q 014547 151 CEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRK---EYLT--R 225 (423)
Q Consensus 151 ~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lpI~h~Lla~~g~~l---~dIk--~ 225 (423)
.++++. ++...+.++++|++|.++-.+- +...-. ..+... .-++.....|+.+++..+ ++++ +
T Consensus 55 i~~~~~-~~~~~~~~l~~g~~d~~~~~~~------~t~~R~----~~~~fs-~p~~~~~~~~~~~~~~~i~~~~dl~g~~ 122 (248)
T d1xt8a1 55 VQFVLV-EAANRVEFLKSNKVDIILANFT------QTPQRA----EQVDFC-SPYMKVALGVAVPKDSNITSVEDLKDKT 122 (248)
T ss_dssp EEEEEC-CGGGHHHHHHTTSCSEECSSCB------CCHHHH----TTEEEC-CCCEEEEEEEEEETTCCCCSSGGGTTSE
T ss_pred eeeeee-cccccccccccCcccccccccc------cchhhh----cceeec-ccccccceeEEEecCcccchhhhhccce
Confidence 456676 4588999999999997642211 111111 111111 112233445666655433 3333 4
Q ss_pred EEechhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEEccHHH
Q 014547 226 VISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARA 278 (423)
Q Consensus 226 VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~A 278 (423)
|....-... .+||++++++++++.+.|..++.+.+..+ +-.++|.....
T Consensus 123 i~v~~gs~~--~~~l~~~~~~~~i~~~~s~~~~~~~l~~g--~vD~~i~~~~~ 171 (248)
T d1xt8a1 123 LLLNKGTTA--DAYFTQNYPNIKTLKYDQNTETFAALMDK--RGDALSHDNTL 171 (248)
T ss_dssp EEEETTSHH--HHHHHHHCTTSEEEEESSHHHHHHHHHTT--SSSEEEEEHHH
T ss_pred eeecCCChH--HHhhhccccccccccccchhhHHHhhccc--ccccccccHHH
Confidence 443322222 57888888999999999999999998876 34566665543
No 29
>d2cdqa3 d.58.18.10 (A:420-494) Aspartokinase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=52.01 E-value=13 Score=27.14 Aligned_cols=57 Identities=9% Similarity=0.206 Sum_probs=40.6
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHH
Q 014547 319 TSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQ 398 (423)
Q Consensus 319 TSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~ 398 (423)
.|++=...++||.+.++++.+++.|||+.-|-.=++.. .-.|.|+= ....+|++.|.
T Consensus 4 IsvVG~~~~~~Giaarif~aL~~~~InV~mIsqg~se~-----------------~Is~vV~~------~d~~~Av~~Lh 60 (75)
T d2cdqa3 4 ISLIGNVQHSSLILERAFHVLYTKGVNVQMISQGASKV-----------------NISFIVNE------AEAEGCVQALH 60 (75)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEECTTCS-----------------EEEEEEEH------HHHHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHHHHcCCceEEEEcCccce-----------------EEEEEEeH------HHHHHHHHHHH
Confidence 45554456789999999999999999999887544332 45666653 45566666664
No 30
>d1us5a_ c.94.1.1 (A:) Putative GluR0 ligand binding core {Thermus thermophilus [TaxId: 274]}
Probab=51.42 E-value=9.5 Score=33.65 Aligned_cols=49 Identities=20% Similarity=0.081 Sum_probs=38.6
Q ss_pred EEEEeCCCccHHHHHHhhhCC-------CCceeecCCHHHHHHHHHcCCcCeEEEee
Q 014547 129 RVAYQGVPGAYSEAAAGKAYP-------NCEAIPCDQFEVAFQAVELWIADRAVLPV 178 (423)
Q Consensus 129 ~VayLGP~GTfSh~AA~~~f~-------~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPI 178 (423)
||+ +|++|+-++..++..+. +...+...+..+.++++.+|++|..+...
T Consensus 117 ~v~-~g~~gsg~~~~~~~~l~~~g~~~dd~~~~~~~~~~~~~~al~~g~iDa~~~~~ 172 (298)
T d1us5a_ 117 RVV-VGDVGSGTEQNARQILEAYGLTFDDLGQAIRVSASQGIQLMQDKRADALFYTV 172 (298)
T ss_dssp EEE-CCCTTCHHHHHHHHHHHHTTCCGGGSSEEECCCHHHHHHHHHTTSCSEEEEEE
T ss_pred ccc-ccCCCchHHHHHHHHHHHhCCCcccccceeccchhHHHHHhcCCceeEEEEec
Confidence 555 49999999998876542 23457788999999999999999877653
No 31
>d2hmfa3 d.58.18.10 (A:304-403) Aspartokinase {Methanococcus jannaschii [TaxId: 2190]}
Probab=50.57 E-value=8.2 Score=29.56 Aligned_cols=30 Identities=7% Similarity=0.077 Sum_probs=25.9
Q ss_pred eCCCccHHHHHHHHHHhCCceeeeeeeeeC
Q 014547 325 HDKGTSVLFKVLSAFAFRNISLTKIESRPH 354 (423)
Q Consensus 325 l~~~pGaL~~vL~~Fa~~~INLtkIESRP~ 354 (423)
++++||.+.++++.|+++|||+--|-.-++
T Consensus 25 m~~~~Gi~arif~~La~~~InV~mIsQ~~S 54 (100)
T d2hmfa3 25 MVGVSGTAARIFKALGEEEVNVILISQGSS 54 (100)
T ss_dssp SSCHHHHHHHHHHHHHHTTCCEEEEEECCT
T ss_pred CCCCcchHHHHHHHHHHcCCCHHHeeccCC
Confidence 567899999999999999999999875443
No 32
>d1p99a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Staphylococcus aureus [TaxId: 1280]}
Probab=47.14 E-value=6.3 Score=33.79 Aligned_cols=49 Identities=6% Similarity=-0.030 Sum_probs=38.3
Q ss_pred cEEEEeCCCccHHHHHHhhhCC----CCceeecCCHHHHHHHHHcCCcCeEEEe
Q 014547 128 LRVAYQGVPGAYSEAAAGKAYP----NCEAIPCDQFEVAFQAVELWIADRAVLP 177 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f~----~~e~vp~~Sf~~Vf~aV~~g~~d~gVVP 177 (423)
.+||+.|+.+-- ++.+.+.|. +++++.+.+..+..+|+..|++|.+..-
T Consensus 2 v~ig~~~~~~~~-~~~~~~~~~k~Gl~Ve~~~f~~~~~~~~Al~~G~iD~~~~~ 54 (255)
T d1p99a_ 2 VTIGVASNDTKA-WEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQ 54 (255)
T ss_dssp EEEEESSSCCHH-HHHHHHHHGGGTCCEEEEECSSTTSHHHHHHTTSSSEEEEE
T ss_pred EEEEEcCCcHHH-HHHHHHHHHHcCCEEEEEEcCCchhHHHHHHcCCCCEEccC
Confidence 589999875443 444555563 5789999999999999999999998654
No 33
>d1tdja3 d.58.18.2 (A:424-514) Allosteric threonine deaminase C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.86 E-value=6.8 Score=30.01 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=27.5
Q ss_pred EEEEEEeCCCccHHHHHHHHHHhCCceeeeeeeeeCCC
Q 014547 319 TSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRN 356 (423)
Q Consensus 319 TSivf~l~~~pGaL~~vL~~Fa~~~INLtkIESRP~~~ 356 (423)
.-+.|.+|.+||+|.+.|+.+.. +.|+|..+=|-+..
T Consensus 11 ~l~~v~iPErpGal~~Fl~~l~~-~~nITeF~YR~~~~ 47 (91)
T d1tdja3 11 RLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGT 47 (91)
T ss_dssp EEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTT
T ss_pred EEEEEECCCCccHHHHHHHHhCC-CCcEEEEEEeecCC
Confidence 45778999999999999999854 34555566576643
No 34
>d3dhxa1 d.58.18.13 (A:2-100) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=39.62 E-value=16 Score=27.69 Aligned_cols=61 Identities=21% Similarity=0.323 Sum_probs=41.2
Q ss_pred cHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHHhhcCceEEEc
Q 014547 330 SVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLG 408 (423)
Q Consensus 330 GaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~~~~~~vrvLG 408 (423)
..+.++.+.| |+...=+..--.. +.+..+| .+++++.| ++.++++|++-|++....+.++|
T Consensus 35 Piis~l~~~~---~v~vnIL~g~i~~------i~~~~~G-------~Lil~l~g--~~~~i~~al~~L~~~~v~vEvlg 95 (99)
T d3dhxa1 35 PLLSETARRF---NVNNNIISAQMDY------AGGVKFG-------IMLTEMHG--TQQDTQAAIAWLQEHHVKVEVLG 95 (99)
T ss_dssp CHHHHHHHHS---CCEEEEEEEEEEE------ETTEEEE-------EEEEEEES--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHh---CCceEEEEEeeEE------eCCeeEE-------EEEEEeeC--CHHHHHHHHHHHHHcCCeEEEee
Confidence 4677777666 6555433332211 1111233 57889998 55889999999999999999999
No 35
>d2esna2 c.94.1.1 (A:92-303) Probable LysR-type transcriptional regulator PA0477 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=39.12 E-value=1.9 Score=34.73 Aligned_cols=34 Identities=15% Similarity=0.026 Sum_probs=25.8
Q ss_pred hhCCCCceeecC-CHHHHHHHHHcCCcCeEEEeec
Q 014547 146 KAYPNCEAIPCD-QFEVAFQAVELWIADRAVLPVE 179 (423)
Q Consensus 146 ~~f~~~e~vp~~-Sf~~Vf~aV~~g~~d~gVVPIE 179 (423)
+.+|++++.... +.+++++.+++|++|+|+....
T Consensus 32 ~~~P~v~i~l~~~~~~~~~~~l~~g~~Dl~i~~~~ 66 (212)
T d2esna2 32 HSAPGVRLRLVNAERKLSVEALASGRIDFALGYDE 66 (212)
T ss_dssp HHSTTCEEEEECCSSSCCHHHHHHTSSSEEEECCS
T ss_pred HHCCCcEEEEEecCcHHHHHHHHHhcccccccccc
Confidence 347888765544 5567899999999999997644
No 36
>d1al3a_ c.94.1.1 (A:) Cofactor-binding fragment of LysR-type protein CysB {Klebsiella aerogenes [TaxId: 28451]}
Probab=38.29 E-value=42 Score=27.50 Aligned_cols=123 Identities=16% Similarity=0.060 Sum_probs=61.9
Q ss_pred hCCCCcee-ecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEeeeeeeeecCCCCcCccc-
Q 014547 147 AYPNCEAI-PCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLT- 224 (423)
Q Consensus 147 ~f~~~e~v-p~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lpI~h~Lla~~g~~l~dIk- 224 (423)
.||++++. -..+.+++.+.|.+|++|+|+.-.-....+.+. ...|.+..+. +..+-.|.|......+++|+.
T Consensus 31 ~~P~v~v~l~~~~~~~l~~~l~~g~~D~ai~~~~~~~~~~l~--~~~l~~~~~~----~v~~~~h~la~~~~~~~~dL~~ 104 (237)
T d1al3a_ 31 RYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLV--MLPCYHWNRS----IVVTPEHPLATKGSVSIEELAQ 104 (237)
T ss_dssp HCTEEEEEEEECCHHHHHHHHHTTCCSEEEESSCCCTTSCEE--EEEEEEECEE----EEECTTSTTTTTSCCCHHHHHT
T ss_pred HCCCcEEEEEECCHHHHHHHHhccCCcEEEEeeccccccccc--ccccccceEE----EEEecCccccccccccchhhcc
Confidence 36777654 356778999999999999999832111111000 0000000110 122233434333333333333
Q ss_pred --EEEech--hHHHHHHHHHHHcCCcee-EEeccCHHHHHHHHHhcCCCCeeEEccHHH
Q 014547 225 --RVISHP--QALSQCEHTLTKLGLNVA-REAVDDTAGAAEYIAANDLRDTAAIASARA 278 (423)
Q Consensus 225 --~VySHP--qAL~QC~~fL~~~~p~~~-~v~~~STA~AA~~va~~~~~~~AAIaS~~A 278 (423)
-|.--+ ....++.+++...+.... ...++|...+.+.+..+ ...+|.+..+
T Consensus 105 ~p~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~s~~~~~~~v~~g---~Gi~~~p~~~ 160 (237)
T d1al3a_ 105 YPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLG---LGVGVIASMA 160 (237)
T ss_dssp SEEEEECTTSTTHHHHHHHHHHHTCCCEEEEEESSHHHHHHHHHHT---SCEEEEEGGG
T ss_pred CCcccccccchHHHHHHHHHHHcCCCCcceeecCCHHHHHHHhcCC---CEEEechHHh
Confidence 332222 245677788877653332 34566777777777765 3345555543
No 37
>d2qswa1 d.58.18.13 (A:256-345) Methionine import ATP-binding protein MetN2 {Enterococcus faecalis [TaxId: 1351]}
Probab=37.55 E-value=15 Score=27.43 Aligned_cols=73 Identities=14% Similarity=0.366 Sum_probs=46.4
Q ss_pred EEEEEEeCC-CccHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHH
Q 014547 319 TSIVFAHDK-GTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEV 397 (423)
Q Consensus 319 TSivf~l~~-~pGaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL 397 (423)
..+.|.=.. .-..+.++...| ||...=+.-.-.. +.+..+| .+++++.| ++..+++|++-|
T Consensus 16 vrl~f~g~~a~~Pvis~l~r~~---~i~vnIL~g~i~~------i~~~~~G-------~L~l~l~G--~~~~i~~al~~L 77 (90)
T d2qswa1 16 VRLLFHGEQAKLPIISHIVQEY---QVEVSIIQGNIQQ------TKQGAVG-------SLYIQLLG--EEQNILAAIEGL 77 (90)
T ss_dssp EEEEEESCSCSSCHHHHHHHHH---TCEEEEEEEEEEE------ETTEEEE-------EEEEEEES--CHHHHHHHHHHH
T ss_pred EEEEEcCCccCccHHHHHHHHh---CCcEEEEEEEeEE------eCCccEE-------EEEEEEEC--CHHHHHHHHHHH
Confidence 344454332 334777777777 5555533332211 1122234 68889999 558999999999
Q ss_pred HhhcCceEEEcc
Q 014547 398 QEFTSFLRVLGS 409 (423)
Q Consensus 398 ~~~~~~vrvLGs 409 (423)
++....+.++|.
T Consensus 78 ~~~~v~vEvi~~ 89 (90)
T d2qswa1 78 RKLRVETEVIGN 89 (90)
T ss_dssp HHTTCEEEESSC
T ss_pred HHCCCEEEEecC
Confidence 999988888873
No 38
>d1z7me1 c.94.1.1 (E:1-204) ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain {Lactococcus lactis [TaxId: 1358]}
Probab=35.91 E-value=98 Score=26.23 Aligned_cols=144 Identities=14% Similarity=0.201 Sum_probs=89.2
Q ss_pred ccEEEEeCCCccHHHHHHhhh----C-----------------CCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCc
Q 014547 127 QLRVAYQGVPGAYSEAAAGKA----Y-----------------PNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGS 185 (423)
Q Consensus 127 ~~~VayLGP~GTfSh~AA~~~----f-----------------~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~ 185 (423)
++|||. |+|.-.+.+..-+ + ++.+++ +-.-.|+-.-|+.|.+|+|++=
T Consensus 1 Ml~iAl--pKGrL~~~~~~lL~~~G~~~~~~~~~~r~l~~~~~~~i~v~-~~r~~DIp~~V~~G~~DlGItG-------- 69 (204)
T d1z7me1 1 MIKIAI--TKGRIQKQVTKLLENADYDVEPILNLGRELQIKTKDDLQII-FGKPNDVITFLEHGIVDIGFVG-------- 69 (204)
T ss_dssp CCCEEE--ETTHHHHHHHHHHHTTTCCCCCC----CCSEECCTTSCCEE-EECHHHHHHHHHTTSCSEEEEE--------
T ss_pred CeEEEe--cCcccHHHHHHHHHHCCCCcccCCCCCcEEeeCCCCCeEEE-EEchHHHHHHHHhcccccccch--------
Confidence 357776 6888888775422 0 012222 2345789999999999999874
Q ss_pred hHHHHHHhhcCCcE-EEEEEEEeeeeeeeec---CCC---CcCcccEEEechhHHHHHHHHHHHcCCceeEEeccCHHHH
Q 014547 186 IHRNYDLLLRHRLH-IVGEVQLPVHHCLLAL---PGV---RKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGA 258 (423)
Q Consensus 186 V~~tlDlL~~~~L~-IvgEi~lpI~h~Lla~---~g~---~l~dIk~VySHPqAL~QC~~fL~~~~p~~~~v~~~STA~A 258 (423)
+|+|.+++.. +.--..+.+.+|-++. +.. +...-++|.+-..-+ .++|+++++.+++++..+-..|+
T Consensus 70 ----~D~l~E~~~~~~~~l~~L~~G~c~l~vA~~~~~~~~~~~~~~RIATkYp~l--t~~f~~~~gi~~~ii~l~GavE~ 143 (204)
T d1z7me1 70 ----KDTLDENDFDDYYELLYLKIGQCIFALASYPDFSNKNFQRHKRIASKYPRV--TKKYFAQKQEDIEIIKLEGSVEL 143 (204)
T ss_dssp ----HHHHHHSSCCCEEEEEEETTCCCEEEEEECGGGGGCCCSSCEEEEESCHHH--HHHHHHHTTCCEEEEECSSCTTH
T ss_pred ----HHHHhcCCCccEEEEecccCCcEEEEECcchhccchhcccccEehHHHHHH--HHHHHHHhCcceEEEEecccccC
Confidence 4777665532 5555678888885432 211 222345788776655 47899999888888876555554
Q ss_pred HHHHHhcCCCCeeEE-ccHHHHHHcCCceeec
Q 014547 259 AEYIAANDLRDTAAI-ASARAAELYGMQVLED 289 (423)
Q Consensus 259 A~~va~~~~~~~AAI-aS~~AAelYgL~ILa~ 289 (423)
|-.+ +-..-.+=| .+-...+.+||+++..
T Consensus 144 aP~~--G~AD~IvDivsTG~TLkaN~Lk~i~~ 173 (204)
T d1z7me1 144 GPVV--GLADAIVDIVETGNTLSANGLEVIEK 173 (204)
T ss_dssp HHHT--TSCSEEEEEESSSHHHHTTTCEEEEE
T ss_pred ccCc--ccccEEEEEeCCHHHHHHCCCEEcee
Confidence 4332 100112223 4456778999999865
No 39
>d2qrra1 d.58.18.13 (A:2-98) Methionine import ATP-binding protein MetN {Vibrio parahaemolyticus [TaxId: 670]}
Probab=35.70 E-value=20 Score=27.01 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHhCCceeeeeeeeeCCCCCcccccccCCCCCCcceEEEEEEEecCcChHHHHHHHHHHHhhcCceEEEc
Q 014547 330 SVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLG 408 (423)
Q Consensus 330 GaL~~vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~~~~~~vrvLG 408 (423)
..|.++.+.| ||+..=|...-.. +.+..+| .+++++.| ++.++++|++-|++....+.++|
T Consensus 34 Pvis~l~~~~---~i~vnIL~g~i~~------i~~~~~G-------~Lil~l~G--~~~~~~~Al~~L~~~~i~vEvlg 94 (97)
T d2qrra1 34 PLMSQISRKY---NIDVSILSSDLDY------AGGVKFG-------MMVAELFG--NEQDDSAAIEYLRENNVKVEVLG 94 (97)
T ss_dssp CHHHHHHHHS---CCEEEEEEEEEEE------ETTEEEE-------EEEEEEES--CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHH---CCCeEEEEEeeEE------eCCeeEE-------EEEEEEEC--CHHHHHHHHHHHHHcCCeEEEee
Confidence 4677776666 6666544433221 1111233 57889998 56899999999999999999988
No 40
>d1xs5a_ c.94.1.1 (A:) Putative lipoprotein (NlpA family) {Treponema pallidum [TaxId: 160]}
Probab=35.64 E-value=30 Score=29.01 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=67.4
Q ss_pred echhHHHHHHHHHHHcCCceeEEeccCHHHHHHHHHhcCCCCeeEEccHHH----HHHcCCceeecCccCCCCCeeEEEE
Q 014547 228 SHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARA----AELYGMQVLEDGIQDDSSNVTRFVM 303 (423)
Q Consensus 228 SHPqAL~QC~~fL~~~~p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~A----AelYgL~ILa~nIqD~~~N~TRFlV 303 (423)
.|.+.+.++++++++++.+++++.+.|-....+.+..++ -+.+..++.-. ++-.+.+++. +... ...-+.+
T Consensus 13 ~~~~~l~~~k~~~k~~Gi~Ve~v~f~~g~~~~~Al~~G~-iD~~~~~~~~~l~~~~~~~~~~i~~--v~~~--~~~~~~l 87 (240)
T d1xs5a_ 13 PHARLLEIAKEEVKKQHIELRIVEFTNYVALNEAVMRGD-ILMNFFQHVPHMQQFNQEHNGDLVS--VGNV--HVEPLAL 87 (240)
T ss_dssp THHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTS-SSEEEEEEHHHHHHHHHHHTCCEEE--EEEE--EECCCEE
T ss_pred CcHHHHHHHHHHHHHcCCEEEEEEeCChhhHHHHHHcCC-cceeccCCHHHHHHHHHhCCCcEEE--eecc--ccCceEE
Confidence 588889999999999999999999999988888888764 44555554332 3345666653 2221 2223566
Q ss_pred EeeCCCCCCCCCCCeEEEEEEeCCCccHHHHHHHHHHhCCc
Q 014547 304 LAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNI 344 (423)
Q Consensus 304 Lsr~~~~~~~~~~~KTSivf~l~~~pGaL~~vL~~Fa~~~I 344 (423)
.+++..... +...+..| .++..+.....+|..+...++
T Consensus 88 ~~~~~~s~~-d~~~gkki--a~p~~~s~~~~~l~~l~~~g~ 125 (240)
T d1xs5a_ 88 YSRTYRHVS-DFPAGAVI--AIPNDSSNEARALRLLEAAGF 125 (240)
T ss_dssp ECSSCCSGG-GCCTTCEE--EEECSHHHHHHHHHHHHHTTS
T ss_pred EecCCCChh-hccCCCEE--EecCCCcHHHHHHHHHHHcCC
Confidence 666532211 11112223 333455566777777777763
No 41
>d2fyia1 c.94.1.1 (A:88-307) LysR-type regulatory protein Cbl {Escherichia coli [TaxId: 562]}
Probab=35.04 E-value=98 Score=24.28 Aligned_cols=113 Identities=14% Similarity=0.108 Sum_probs=61.5
Q ss_pred hCCCCcee-ecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHhhcCCcEEEEEEEEeeeeeeeecCCC-------
Q 014547 147 AYPNCEAI-PCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGV------- 218 (423)
Q Consensus 147 ~f~~~e~v-p~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL~~~~L~IvgEi~lpI~h~Lla~~g~------- 218 (423)
.+|+.++. -..+..++.+.+.+|++|+|++....... .++ ..+....-.+++++.++.
T Consensus 31 ~~P~i~l~i~~~~~~~~~~~l~~g~~Di~i~~~~~~~~------------~~~--~~~~l~~~~~~~v~~~~~~~~~~~~ 96 (220)
T d2fyia1 31 LFPEVRLELIQGTPQEIATLLQNGEADIGIASERLSND------------PQL--VAFPWFRWHHSLLVPHDHPLTQISP 96 (220)
T ss_dssp HCTTEEEEEEECCHHHHHHHHHHTSCSEEEESSSSTTC------------TTE--EEEEEEEECEEEEEETTCGGGTSSS
T ss_pred HCCCcEEEEEECCcHHHHHHHHhhhhhhhhhccccccc------------ccc--cccccccccceeeccccccccccCc
Confidence 46777653 46778899999999999999985332211 111 122222223444444332
Q ss_pred -CcCcc---cEEEech--hHHHHHHHHHHHcC--CceeEEeccCHHHHHHHHHhcCCCCeeEEccHH
Q 014547 219 -RKEYL---TRVISHP--QALSQCEHTLTKLG--LNVAREAVDDTAGAAEYIAANDLRDTAAIASAR 277 (423)
Q Consensus 219 -~l~dI---k~VySHP--qAL~QC~~fL~~~~--p~~~~v~~~STA~AA~~va~~~~~~~AAIaS~~ 277 (423)
.++++ .-|.-.+ ....+..+++.+.+ |+. ...++|...+.+++..+ ...+|.+..
T Consensus 97 ~~~~dL~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~g---~gi~ilp~~ 159 (220)
T d2fyia1 97 LTLESIAKWPLITYRQGITGRSRIDDAFARKGLLADI-VLSAQDSDVIKTYVALG---LGIGLVAEQ 159 (220)
T ss_dssp CCHHHHTTSCEEEECTTSTTHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHT---SCEEEEEGG
T ss_pred chhhhhccccccccccccchHHHHHHHHhhcccCCce-eEEEccHHHHHHHHhhc---ceEEeCcHH
Confidence 22222 2333222 23356667777654 333 34466666677777765 345666654
No 42
>d1pb7a_ c.94.1.1 (A:) N-methyl-D-aspartate receptor subunit 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.58 E-value=9.9 Score=32.73 Aligned_cols=75 Identities=13% Similarity=0.023 Sum_probs=50.1
Q ss_pred CCccHHHHHHhhh------CCCCceeecCCHHHHHHHHHcCCcCeEEEeeccCCCCchHHHHHHh--hcCCcEEEEEEEE
Q 014547 135 VPGAYSEAAAGKA------YPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLL--LRHRLHIVGEVQL 206 (423)
Q Consensus 135 P~GTfSh~AA~~~------f~~~e~vp~~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~tlDlL--~~~~L~IvgEi~l 206 (423)
..|++.+...++. ++..++..+++..+++++|..|++|..+.... .+..+ ...++.++++...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~da~i~d~~---------~~~~~~~~~~~l~~~~~~~~ 243 (289)
T d1pb7a_ 173 VKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSA---------VLEFEASQKCDLVTTGELFF 243 (289)
T ss_dssp BTTSHHHHHHHTCGGGHHHHHHHTTTCBSSHHHHHHHHHTTSCSEEEEEHH---------HHHHHHHHCTTEEECSSCSE
T ss_pred eccHHHHHHHHhhhhhhhccccceEEEcCCHHHHHHHHhCCCeEEEEehhh---------HHHHHHhhCCCEEEeccccC
Confidence 5566666665542 23456788999999999999999998876522 22222 2346788777655
Q ss_pred eeeeeeeecCCC
Q 014547 207 PVHHCLLALPGV 218 (423)
Q Consensus 207 pI~h~Lla~~g~ 218 (423)
+-.++++.+++.
T Consensus 244 ~~~~~~a~~k~~ 255 (289)
T d1pb7a_ 244 RSGFGIGMRKDS 255 (289)
T ss_dssp EEEECCEEETTC
T ss_pred ceeEEEEEcCCh
Confidence 556667666654
No 43
>d1lsta_ c.94.1.1 (A:) Lysine-,arginine-,ornithine-binding (LAO) protein {Salmonella typhimurium [TaxId: 90371]}
Probab=31.20 E-value=47 Score=26.66 Aligned_cols=47 Identities=15% Similarity=0.200 Sum_probs=35.9
Q ss_pred cEEEEeCCCccHHHHHHhhhC--CCCceeecCCHHHHHHHHHcCCcCeEEE
Q 014547 128 LRVAYQGVPGAYSEAAAGKAY--PNCEAIPCDQFEVAFQAVELWIADRAVL 176 (423)
Q Consensus 128 ~~VayLGP~GTfSh~AA~~~f--~~~e~vp~~Sf~~Vf~aV~~g~~d~gVV 176 (423)
.+|++. .|+..+.-..+.+ ++.+.+...+.++++.++..|++|+.+.
T Consensus 112 ~~i~v~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~gr~D~~~~ 160 (238)
T d1lsta_ 112 KHVGVL--QGSTQEAYANDNWRTKGVDVVAYANQDLIYSDLTAGRLDAALQ 160 (238)
T ss_dssp CEEEEE--TTSHHHHHHHHHTGGGTCEEEEESSHHHHHHHHHTTSCSEEEE
T ss_pred CEEEEE--ecchHHHHHHHhhhccccceeeeCCHHHHHHHHhhhcccEEEe
Confidence 477765 5766555554443 4678899999999999999999998764
No 44
>d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=30.14 E-value=24 Score=29.05 Aligned_cols=46 Identities=13% Similarity=0.201 Sum_probs=34.4
Q ss_pred CccEEEEeCCCccH-HHHHHhhhCC--CCceeecCCHHHHHHHHHcCCcCeEEEe
Q 014547 126 SQLRVAYQGVPGAY-SEAAAGKAYP--NCEAIPCDQFEVAFQAVELWIADRAVLP 177 (423)
Q Consensus 126 ~~~~VayLGP~GTf-Sh~AA~~~f~--~~e~vp~~Sf~~Vf~aV~~g~~d~gVVP 177 (423)
+.+|||.|.=.|+| ||..|.+..+ ++++...++.+++ ..+|.-|||
T Consensus 1 ~~ikIGvl~l~G~~~~~~~al~~lg~~~~~v~~~~~~~~l------~~~D~lIlP 49 (218)
T d2abwa1 1 SEITIGVLSLQGDFEPHINHFIKLQIPSLNIIQVRNVHDL------GLCDGLVIP 49 (218)
T ss_dssp CCEEEEEECTTSCCHHHHHHHHTTCCTTEEEEEECSHHHH------HTCSEEEEC
T ss_pred CCCEEEEEeCCCcHHHHHHHHHHcCCCceEEEEeCCHHHH------hhCCEEEEc
Confidence 46899999988999 6677766543 4677777887764 247888998
No 45
>d1utha_ c.94.1.1 (A:) LysR-type regulatory protein DntR {Burkholderia sp. [TaxId: 36773]}
Probab=25.56 E-value=1.4e+02 Score=23.01 Aligned_cols=144 Identities=11% Similarity=0.015 Sum_probs=72.4
Q ss_pred cCCCCCCCCCccEEEEeCCCccHHHHH-------HhhhCCCCceeec-CCHHHHHHHHHcCCcCeEEEeeccCCCCchHH
Q 014547 117 DLSPAPMHGSQLRVAYQGVPGAYSEAA-------AGKAYPNCEAIPC-DQFEVAFQAVELWIADRAVLPVENSLGGSIHR 188 (423)
Q Consensus 117 ~~~~~~~~~~~~~VayLGP~GTfSh~A-------A~~~f~~~e~vp~-~Sf~~Vf~aV~~g~~d~gVVPIENS~~G~V~~ 188 (423)
+.+|+-. ....+||... +.+..- -.+.+|++++... .+-.++.+.+.+|++|+|+...-....+..
T Consensus 4 ~fdP~~~-~~~~rI~~~~---~~~~~~lp~ll~~f~~~~P~v~l~i~~~~~~~~~~~l~~g~~D~~i~~~~~~~~~~~-- 77 (219)
T d1utha_ 4 SFDPFAS-TRTFNLAMTD---IGEMYFMPPLMEALAQRAPHIQISTLRPNAGNLKEDMESGAVDLALGLLPELQTGFF-- 77 (219)
T ss_dssp SCCTTTC-CCEEEEECCH---HHHHHHHHHHHHHHHHHCTTCEEEEECTTSSCHHHHHHHTSCCEEEECCTTCCTTEE--
T ss_pred ccCcccc-CCEEEEEEcH---HHHHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHHHHhcCCceeeeeecccccccch--
Confidence 4556543 3356777653 222221 1234688776543 345678889999999999876443322211
Q ss_pred HHHHhhcCCcEEEEEEEEeeeeeeeecC-------CCCcCcc---cEEEech--hHHHHHHHHHHHcCCcee-EEeccCH
Q 014547 189 NYDLLLRHRLHIVGEVQLPVHHCLLALP-------GVRKEYL---TRVISHP--QALSQCEHTLTKLGLNVA-REAVDDT 255 (423)
Q Consensus 189 tlDlL~~~~L~IvgEi~lpI~h~Lla~~-------g~~l~dI---k~VySHP--qAL~QC~~fL~~~~p~~~-~v~~~ST 255 (423)
.+....-..++++.+ ...+++. ..+.-.+ ..-.+-..++.+++.... ...++|.
T Consensus 78 -------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 144 (219)
T d1utha_ 78 -------------QRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHF 144 (219)
T ss_dssp -------------EEEEEEECEEEEEETTCSSCCSSCCHHHHHHSEEEEECCTTSGGGGHHHHHHHTTCCCEEEEEESSS
T ss_pred -------------hhhcccccccccccccchhhhccccHHHHhcCCcEEecCCcchhHHHHHHHHhcCCcccccccCCCH
Confidence 111122223333322 2222221 2222211 112244556666653322 3345666
Q ss_pred HHHHHHHHhcCCCCeeEEccHHHHHHc
Q 014547 256 AGAAEYIAANDLRDTAAIASARAAELY 282 (423)
Q Consensus 256 A~AA~~va~~~~~~~AAIaS~~AAelY 282 (423)
..+.+.++.+ ...+|.++..++.+
T Consensus 145 ~~~~~~v~~~---~gi~i~p~~~~~~~ 168 (219)
T d1utha_ 145 IAIGPILHST---DLIATVPQRFAVRC 168 (219)
T ss_dssp TTHHHHHHTS---SCBEEEEHHHHHHH
T ss_pred HHHHHHHhCC---CcceechHHHHHHh
Confidence 6677777754 56777777766543
No 46
>d1lqla_ d.227.1.1 (A:) Hypothetical protein MPN625 {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=21.94 E-value=1e+02 Score=23.80 Aligned_cols=63 Identities=11% Similarity=0.026 Sum_probs=37.4
Q ss_pred HHHHHHhCCceeeeeeeeeCCCCCccccccc-CCCCCCcceEEEEEEEecCcChHHHHHHHHHHHhhcC
Q 014547 335 VLSAFAFRNISLTKIESRPHRNRPIRLVDDA-NVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTS 402 (423)
Q Consensus 335 vL~~Fa~~~INLtkIESRP~~~~p~~~~~~~-~~G~~~~~eY~FfID~eg~~~d~~v~~aL~eL~~~~~ 402 (423)
+....+++|+.+.+++-+-.... |.. ..|.....+..+.|.+++..++++++++++...+.|.
T Consensus 57 ~~~~a~~~gi~~~~~~v~v~~~~-----d~~~~~~~~~~~~i~~~v~i~~d~~~e~~~~l~~~~~~~Cp 120 (141)
T d1lqla_ 57 ANLMAPAKMITINKLLMNVTGSR-----STNPTDGYFGLREINLHWEIHSPNSETEIKEFIDFVSKRCP 120 (141)
T ss_dssp HHHHHHHHTCCCSEEEEEEEEEE-----CSSCSSSCCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHccCCccceEEEEEEEE-----eccccCCccceEEEEEEEeccCcccHHHHHHHHHHHHhcCc
Confidence 34456778999887765533210 100 1111111234566667777888999999998887764
Done!