Citrus Sinensis ID: 014547

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420---
MNTLSSPSPLIRPRGSRSRCRQFNRVQCVYRSDSVHFPNGIGCSRTDWQSSCAILSSNVVSQQQSGDKPAEHIAAVNGHKTSIDLNLVPIEHANSAAATASNNKPQLPPQKPLTITDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSRGE
ccccccccccccccccccccccccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccHHHccccccccccccEEEEccccccHHHHHHHHHcccccECccccHHHHHHHHHcccccEEEEEccccccccHHHHHHHHcccccEEEEEEEEEEEEEEccccccccccccEEEccHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHccccccEEEccHHHHHHHccHHHHcccccccccEEEEEEEEccccccccccccCEEEEEEEcccHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHccccEEEEECcccccccccccccc
*******************CRQFNRVQCVYRSDSVHFPNGIGCSRTDWQSSCAILSS***************************LNLVPIE************************************LRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDM*********
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MNTLSSPSPLIRPRGSRSRCRQFNRVQCVYRSDSVHFPNGIGCSRTDWQSSCAILSSNVVSQQQSGDKPAEHIAAVNGHKTSIDLNLVPIEHANSAAATASNNKPQLPPQKPLTITDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTAAIASARAAELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSRGE

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Arogenate dehydratase/prephenate dehydratase 6, chloroplastic Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine.confidentQ9SGD6
Arogenate dehydratase 4, chloroplastic Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine.probableO22241
Arogenate dehydratase 3, chloroplastic Converts the prephenate produced from the shikimate-chorismate pathway into phenylalanine. Together with GCR1 and GPA1, required for blue light-mediated synthesis of phenylpyruvate and subsequently of phenylalanine (Phe), in etiolated seedlings.probableQ9ZUY3

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.1.-Hydro-lyases.probable
4.2.1.91Arogenate dehydratase.probable
4.2.1.51Prephenate dehydratase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3MWB, chain A
Confidence level:very confident
Coverage over the Query: 128-358,373-414
View the alignment between query and template
View the model in PyMOL