Query 014549
Match_columns 423
No_of_seqs 282 out of 3436
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 13:35:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014549.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014549hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 1E-45 3.4E-50 403.0 20.1 342 34-417 18-379 (780)
2 3apq_A DNAJ homolog subfamily 100.0 1.2E-39 4.1E-44 300.2 13.6 197 37-253 2-201 (210)
3 3us3_A Calsequestrin-1; calciu 100.0 5.4E-33 1.8E-37 277.2 21.1 259 124-418 5-271 (367)
4 1sji_A Calsequestrin 2, calseq 100.0 1.1E-31 3.8E-36 265.8 21.5 256 124-418 3-269 (350)
5 2r2j_A Thioredoxin domain-cont 100.0 2.9E-30 1E-34 258.7 16.8 249 134-417 3-260 (382)
6 3f8u_A Protein disulfide-isome 100.0 1.7E-29 6E-34 260.2 21.3 221 137-380 2-232 (481)
7 3ed3_A Protein disulfide-isome 100.0 4.5E-29 1.5E-33 241.8 19.9 231 133-378 14-282 (298)
8 2b5e_A Protein disulfide-isome 100.0 4.3E-28 1.5E-32 251.3 15.8 218 135-380 13-235 (504)
9 3idv_A Protein disulfide-isome 99.9 1.2E-25 4.2E-30 209.6 19.8 209 136-365 15-237 (241)
10 3apo_A DNAJ homolog subfamily 99.9 6.5E-23 2.2E-27 223.2 22.7 225 136-381 440-672 (780)
11 3q6o_A Sulfhydryl oxidase 1; p 99.9 1.6E-22 5.5E-27 189.8 21.5 210 136-362 12-237 (244)
12 3t58_A Sulfhydryl oxidase 1; o 99.9 1.3E-20 4.3E-25 195.2 22.5 210 137-362 13-237 (519)
13 3h79_A Thioredoxin-like protei 99.8 1.3E-20 4.3E-25 158.6 10.5 107 135-252 14-126 (127)
14 1a8l_A Protein disulfide oxido 99.8 7.2E-20 2.5E-24 169.1 15.3 195 152-363 21-224 (226)
15 2ywm_A Glutaredoxin-like prote 99.8 9.4E-20 3.2E-24 168.9 16.0 195 146-363 11-218 (229)
16 3uem_A Protein disulfide-isome 99.8 8.8E-20 3E-24 180.7 16.4 211 137-364 118-356 (361)
17 2och_A Hypothetical protein DN 99.8 9.9E-20 3.4E-24 138.5 6.9 67 36-102 7-73 (73)
18 2dml_A Protein disulfide-isome 99.8 1.2E-18 4E-23 146.7 11.9 107 136-254 17-124 (130)
19 1hdj_A Human HSP40, HDJ-1; mol 99.8 2.9E-19 1E-23 137.4 7.1 69 36-104 2-72 (77)
20 3zzx_A Thioredoxin; oxidoreduc 99.8 2.5E-19 8.5E-24 146.2 7.1 99 139-252 3-104 (105)
21 2ctp_A DNAJ homolog subfamily 99.8 2.9E-19 1E-23 137.7 6.3 71 34-104 4-76 (78)
22 2dn9_A DNAJ homolog subfamily 99.8 4.6E-19 1.6E-23 137.0 6.9 70 34-103 4-76 (79)
23 2ej7_A HCG3 gene; HCG3 protein 99.8 6.2E-19 2.1E-23 137.2 7.2 71 33-103 5-79 (82)
24 2o37_A Protein SIS1; HSP40, J- 99.8 3E-19 1E-23 142.0 5.5 69 36-104 7-75 (92)
25 2cug_A Mkiaa0962 protein; DNAJ 99.8 8.5E-19 2.9E-23 138.2 6.8 70 34-103 14-85 (88)
26 3gnj_A Thioredoxin domain prot 99.8 1.1E-18 3.6E-23 142.4 7.6 103 137-252 5-108 (111)
27 3ga4_A Dolichyl-diphosphooligo 99.7 3.2E-18 1.1E-22 152.1 10.3 107 137-252 19-151 (178)
28 3uvt_A Thioredoxin domain-cont 99.7 1.1E-18 3.8E-23 142.1 6.5 105 134-252 3-110 (111)
29 1x5d_A Protein disulfide-isome 99.7 2.1E-18 7.2E-23 145.4 8.3 106 135-253 6-116 (133)
30 2voc_A Thioredoxin; electron t 99.7 3E-18 1E-22 140.8 8.9 101 138-252 3-103 (112)
31 3tco_A Thioredoxin (TRXA-1); d 99.7 2.8E-18 9.5E-23 139.2 7.7 103 137-252 5-107 (109)
32 2ctr_A DNAJ homolog subfamily 99.7 1.5E-18 5E-23 136.9 5.8 70 34-103 4-75 (88)
33 3die_A Thioredoxin, TRX; elect 99.7 3.8E-18 1.3E-22 137.8 8.0 102 137-252 4-105 (106)
34 2djj_A PDI, protein disulfide- 99.7 1.3E-17 4.5E-22 138.3 11.3 103 136-252 7-115 (121)
35 2dj1_A Protein disulfide-isome 99.7 4.3E-18 1.5E-22 145.1 8.5 104 136-253 17-123 (140)
36 2trx_A Thioredoxin; electron t 99.7 5.9E-18 2E-22 137.4 8.5 103 137-252 3-106 (108)
37 3p2a_A Thioredoxin 2, putative 99.7 7.2E-18 2.4E-22 145.5 9.5 105 137-254 39-143 (148)
38 1nsw_A Thioredoxin, TRX; therm 99.7 4.2E-18 1.4E-22 137.6 7.3 102 138-252 2-103 (105)
39 2i4a_A Thioredoxin; acidophIle 99.7 8.9E-18 3.1E-22 135.8 8.8 103 137-252 3-106 (107)
40 2ctq_A DNAJ homolog subfamily 99.7 2.4E-18 8.4E-23 141.8 5.0 72 33-104 16-90 (112)
41 2ctw_A DNAJ homolog subfamily 99.7 5.6E-18 1.9E-22 138.9 7.1 72 33-104 13-87 (109)
42 3hz4_A Thioredoxin; NYSGXRC, P 99.7 5.3E-18 1.8E-22 145.2 7.2 104 136-252 6-110 (140)
43 2yzu_A Thioredoxin; redox prot 99.7 6.4E-18 2.2E-22 136.8 7.3 103 137-252 2-104 (109)
44 2lgw_A DNAJ homolog subfamily 99.7 3.4E-18 1.2E-22 137.5 5.5 67 37-103 2-72 (99)
45 1mek_A Protein disulfide isome 99.7 4.9E-18 1.7E-22 140.0 6.3 106 136-252 7-115 (120)
46 2e0q_A Thioredoxin; electron t 99.7 7.5E-18 2.6E-22 135.1 7.3 101 138-252 1-101 (104)
47 2ppt_A Thioredoxin-2; thiredox 99.7 9.5E-18 3.3E-22 146.5 8.3 102 138-252 49-150 (155)
48 3aps_A DNAJ homolog subfamily 99.7 6.5E-18 2.2E-22 140.5 6.9 106 136-254 3-113 (122)
49 1t00_A Thioredoxin, TRX; redox 99.7 1.5E-17 5E-22 136.1 8.8 103 137-252 6-109 (112)
50 1x5e_A Thioredoxin domain cont 99.7 1.3E-17 4.4E-22 139.7 8.6 102 135-252 6-108 (126)
51 2dmx_A DNAJ homolog subfamily 99.7 5.1E-18 1.7E-22 135.0 5.6 70 34-103 6-79 (92)
52 1thx_A Thioredoxin, thioredoxi 99.7 2E-17 6.9E-22 135.5 9.4 103 137-252 8-111 (115)
53 4euy_A Uncharacterized protein 99.7 7.7E-18 2.6E-22 136.5 6.6 97 142-252 7-103 (105)
54 2qsi_A Putative hydrogenase ex 99.7 9.5E-18 3.2E-22 142.3 7.2 103 137-252 16-121 (137)
55 1bq0_A DNAJ, HSP40; chaperone, 99.7 4.3E-18 1.5E-22 138.3 4.9 69 36-104 2-73 (103)
56 2o8v_B Thioredoxin 1; disulfid 99.7 1.1E-17 3.8E-22 141.1 7.4 105 135-252 21-126 (128)
57 3qou_A Protein YBBN; thioredox 99.7 2.6E-17 9.1E-22 157.6 10.9 103 137-252 8-112 (287)
58 2dj3_A Protein disulfide-isome 99.7 2.5E-17 8.5E-22 139.0 9.4 107 135-252 6-116 (133)
59 3hxs_A Thioredoxin, TRXP; elec 99.7 2.4E-17 8.1E-22 140.7 9.3 105 135-252 21-137 (141)
60 2qgv_A Hydrogenase-1 operon pr 99.7 4.5E-18 1.5E-22 144.8 4.6 103 138-253 19-124 (140)
61 2yua_A Williams-beuren syndrom 99.7 1.5E-17 5.2E-22 134.0 7.5 69 34-102 14-85 (99)
62 1dby_A Chloroplast thioredoxin 99.7 1.7E-17 6E-22 134.3 7.8 102 138-252 3-105 (107)
63 2l5l_A Thioredoxin; structural 99.7 3.2E-17 1.1E-21 139.5 9.6 104 135-252 8-124 (136)
64 2i1u_A Thioredoxin, TRX, MPT46 99.7 1.5E-17 5.1E-22 137.8 7.3 106 134-252 10-116 (121)
65 3qfa_C Thioredoxin; protein-pr 99.7 9.6E-18 3.3E-22 138.8 5.9 100 138-252 14-115 (116)
66 1w4v_A Thioredoxin, mitochondr 99.7 2.1E-17 7.3E-22 137.2 8.0 106 134-252 11-117 (119)
67 1fb6_A Thioredoxin M; electron 99.7 3E-17 1E-21 132.2 8.6 102 138-252 2-104 (105)
68 2c0g_A ERP29 homolog, windbeut 99.7 4.8E-17 1.6E-21 152.5 10.6 105 135-252 15-130 (248)
69 1wjz_A 1700030A21RIK protein; 99.7 1.2E-17 4.2E-22 133.3 5.5 67 35-101 14-89 (94)
70 1oaz_A Thioredoxin 1; immune s 99.7 2.6E-17 8.7E-22 138.0 6.1 103 137-252 4-121 (123)
71 2qsa_A DNAJ homolog DNJ-2; J-d 99.7 1.4E-17 4.9E-22 136.6 4.4 70 34-103 12-88 (109)
72 3ul3_B Thioredoxin, thioredoxi 99.7 7.4E-17 2.5E-21 135.7 8.8 98 141-251 30-127 (128)
73 2pu9_C TRX-F, thioredoxin F-ty 99.7 9.8E-17 3.3E-21 131.1 9.2 104 135-252 4-109 (111)
74 1r26_A Thioredoxin; redox-acti 99.7 6E-17 2E-21 136.1 7.2 100 138-252 21-121 (125)
75 2dj0_A Thioredoxin-related tra 99.7 1.3E-17 4.6E-22 141.9 3.1 104 136-252 7-119 (137)
76 2es7_A Q8ZP25_salty, putative 99.7 1.5E-16 5E-21 136.9 9.6 102 138-253 19-124 (142)
77 1gh2_A Thioredoxin-like protei 99.7 1.1E-16 3.9E-21 129.8 8.4 100 138-252 3-105 (107)
78 1xwb_A Thioredoxin; dimerizati 99.7 7.4E-17 2.5E-21 130.1 7.0 101 138-252 2-105 (106)
79 2hls_A Protein disulfide oxido 99.7 1.4E-15 4.6E-20 142.7 16.2 194 145-364 16-225 (243)
80 3f3q_A Thioredoxin-1; His TAG, 99.7 1.1E-16 3.8E-21 130.8 7.6 99 139-252 10-108 (109)
81 3idv_A Protein disulfide-isome 99.7 1.7E-16 5.7E-21 147.5 9.8 103 136-252 130-235 (241)
82 1ep7_A Thioredoxin CH1, H-type 99.7 5.7E-17 2E-21 132.4 5.8 101 138-252 4-109 (112)
83 3dxb_A Thioredoxin N-terminall 99.7 1E-16 3.5E-21 148.2 8.2 106 135-253 11-117 (222)
84 1v98_A Thioredoxin; oxidoreduc 99.7 1.5E-16 5E-21 135.9 8.6 104 136-252 33-136 (140)
85 3d6i_A Monothiol glutaredoxin- 99.7 1.3E-16 4.4E-21 130.5 7.9 101 138-252 2-107 (112)
86 2av4_A Thioredoxin-like protei 99.7 7.4E-17 2.5E-21 139.1 6.5 106 138-252 23-137 (160)
87 2qc7_A ERP31, ERP28, endoplasm 99.7 1.8E-16 6.3E-21 148.0 9.4 103 137-252 6-117 (240)
88 1syr_A Thioredoxin; SGPP, stru 99.6 8.5E-17 2.9E-21 131.9 5.7 102 136-252 9-110 (112)
89 3m9j_A Thioredoxin; oxidoreduc 99.6 1.3E-16 4.3E-21 128.6 6.5 96 142-252 7-104 (105)
90 4f9z_D Endoplasmic reticulum r 99.6 2.3E-15 8E-20 139.5 15.3 201 138-363 11-223 (227)
91 2l57_A Uncharacterized protein 99.6 6.6E-16 2.2E-20 129.2 10.4 102 138-252 6-115 (126)
92 2xc2_A Thioredoxinn; oxidoredu 99.6 1.9E-16 6.6E-21 130.7 6.5 100 137-252 14-116 (117)
93 2l6c_A Thioredoxin; oxidoreduc 99.6 2.6E-16 8.9E-21 128.8 7.1 100 138-252 5-104 (110)
94 1faa_A Thioredoxin F; electron 99.6 3.9E-16 1.3E-20 130.1 7.9 103 136-252 18-122 (124)
95 2vlu_A Thioredoxin, thioredoxi 99.6 2.1E-16 7.2E-21 131.2 6.0 100 138-252 15-118 (122)
96 3emx_A Thioredoxin; structural 99.6 1.3E-16 4.3E-21 135.8 4.7 102 137-252 17-124 (135)
97 2ys8_A RAB-related GTP-binding 99.6 1.4E-16 4.7E-21 126.0 4.2 60 36-95 26-87 (90)
98 2vim_A Thioredoxin, TRX; thior 99.6 4E-16 1.4E-20 125.3 6.9 99 139-252 2-103 (104)
99 2pf4_E Small T antigen; PP2A, 99.6 2.1E-17 7.4E-22 145.1 -0.8 67 34-101 8-76 (174)
100 1zma_A Bacterocin transport ac 99.6 7.1E-17 2.4E-21 133.6 2.3 101 138-250 14-117 (118)
101 1gh6_A Large T antigen; tumor 99.6 2.9E-17 1E-21 135.1 -0.1 66 36-102 7-74 (114)
102 3gix_A Thioredoxin-like protei 99.6 2.2E-16 7.4E-21 136.9 5.4 103 141-252 9-119 (149)
103 1faf_A Large T antigen; J doma 99.6 1.6E-16 5.6E-21 122.3 3.6 65 36-102 10-76 (79)
104 2l6l_A DNAJ homolog subfamily 99.6 3.4E-16 1.1E-20 136.6 5.7 69 33-101 6-83 (155)
105 2oe3_A Thioredoxin-3; electron 99.6 3.1E-16 1.1E-20 129.4 5.1 99 138-251 14-113 (114)
106 2j23_A Thioredoxin; immune pro 99.6 5E-16 1.7E-20 129.3 6.4 102 137-252 16-119 (121)
107 2yj7_A LPBCA thioredoxin; oxid 99.4 5.1E-17 1.7E-21 130.6 0.0 102 138-252 3-105 (106)
108 3evi_A Phosducin-like protein 99.6 8.9E-16 3E-20 127.7 6.9 99 137-252 4-112 (118)
109 2wz9_A Glutaredoxin-3; protein 99.6 8.7E-16 3E-20 133.4 6.6 104 135-253 11-117 (153)
110 1xfl_A Thioredoxin H1; AT3G510 99.6 1E-15 3.5E-20 128.2 6.3 103 135-252 15-122 (124)
111 1a8l_A Protein disulfide oxido 99.6 2.4E-15 8.1E-20 138.6 7.8 101 139-252 119-224 (226)
112 3d22_A TRXH4, thioredoxin H-ty 99.6 1.9E-15 6.5E-20 128.6 6.5 106 137-257 25-135 (139)
113 2dbc_A PDCL2, unnamed protein 99.6 2.8E-15 9.5E-20 127.5 7.4 102 134-252 8-119 (135)
114 2vm1_A Thioredoxin, thioredoxi 99.6 2.8E-15 9.6E-20 123.3 6.4 101 137-252 7-112 (118)
115 3qcp_A QSOX from trypanosoma b 99.6 7.7E-16 2.6E-20 156.0 3.4 106 135-252 22-137 (470)
116 1qgv_A Spliceosomal protein U5 99.6 2.1E-15 7.2E-20 129.6 5.5 102 142-252 10-119 (142)
117 1iur_A KIAA0730 protein; DNAJ 99.6 6.8E-16 2.3E-20 121.0 2.1 63 33-95 12-78 (88)
118 1ti3_A Thioredoxin H, PTTRXH1; 99.6 1.5E-15 5E-20 124.0 4.1 101 137-252 5-110 (113)
119 3hho_A CO-chaperone protein HS 99.6 1.6E-15 5.6E-20 134.4 4.7 66 34-99 1-76 (174)
120 3cxg_A Putative thioredoxin; m 99.6 2.9E-15 9.8E-20 127.1 5.8 101 136-252 20-127 (133)
121 2qwo_B Putative tyrosine-prote 99.5 2E-15 6.8E-20 118.7 4.3 65 24-89 21-91 (92)
122 2b5e_A Protein disulfide-isome 99.5 8.2E-15 2.8E-19 151.5 9.6 104 136-252 358-465 (504)
123 2f51_A Thioredoxin; electron t 99.5 3.4E-15 1.1E-19 123.8 4.9 100 138-252 5-111 (118)
124 3lz8_A Putative chaperone DNAJ 99.5 5.9E-16 2E-20 150.7 0.0 67 36-102 27-95 (329)
125 3f8u_A Protein disulfide-isome 99.5 1.1E-14 3.6E-19 149.7 8.8 105 136-252 352-459 (481)
126 2kuc_A Putative disulphide-iso 99.5 9.8E-15 3.3E-19 122.5 7.1 103 139-252 9-119 (130)
127 3uo3_A J-type CO-chaperone JAC 99.5 3.8E-15 1.3E-19 132.6 4.5 72 31-102 5-86 (181)
128 1fpo_A HSC20, chaperone protei 99.5 7.1E-15 2.4E-19 129.9 4.7 62 38-99 2-73 (171)
129 2guz_A Mitochondrial import in 99.5 4.1E-15 1.4E-19 112.0 2.6 58 36-94 13-71 (71)
130 3bvo_A CO-chaperone protein HS 99.5 1.1E-14 3.8E-19 132.3 6.0 65 34-98 40-114 (207)
131 1n4c_A Auxilin; four helix bun 99.5 8.4E-15 2.9E-19 129.4 4.6 60 37-96 117-182 (182)
132 1wmj_A Thioredoxin H-type; str 99.5 4.4E-15 1.5E-19 124.4 1.8 102 137-253 15-121 (130)
133 2fwh_A Thiol:disulfide interch 99.5 3E-14 1E-18 120.7 6.6 102 142-252 18-126 (134)
134 2trc_P Phosducin, MEKA, PP33; 99.5 7.2E-15 2.5E-19 135.4 2.9 101 137-252 100-211 (217)
135 1a0r_P Phosducin, MEKA, PP33; 99.5 1.9E-14 6.6E-19 134.6 5.0 101 137-252 113-224 (245)
136 1fo5_A Thioredoxin; disulfide 99.5 8.9E-14 3E-18 107.3 7.8 82 154-252 3-84 (85)
137 2djk_A PDI, protein disulfide- 99.5 5E-14 1.7E-18 119.4 6.7 101 138-253 8-114 (133)
138 3ag7_A Putative uncharacterize 99.5 1.6E-14 5.4E-19 117.2 3.3 55 36-91 40-104 (106)
139 1nho_A Probable thioredoxin; b 99.5 1.3E-13 4.5E-18 106.4 8.2 81 155-252 3-83 (85)
140 3fk8_A Disulphide isomerase; A 99.5 1.3E-13 4.3E-18 116.3 8.6 92 151-252 27-131 (133)
141 2ywm_A Glutaredoxin-like prote 99.5 5.9E-14 2E-18 129.6 7.0 98 138-252 120-218 (229)
142 1wou_A Thioredoxin -related pr 99.4 4.5E-14 1.6E-18 117.8 4.4 104 137-251 6-122 (123)
143 3uem_A Protein disulfide-isome 99.4 6.5E-12 2.2E-16 123.9 20.7 204 136-364 17-229 (361)
144 1sji_A Calsequestrin 2, calseq 99.4 5.3E-12 1.8E-16 124.3 17.8 204 138-366 125-347 (350)
145 3us3_A Calsequestrin-1; calciu 99.4 5.7E-12 2E-16 125.1 17.0 211 138-371 127-354 (367)
146 2hls_A Protein disulfide oxido 99.4 6.1E-13 2.1E-17 124.5 9.4 84 152-252 137-224 (243)
147 3kp8_A Vkorc1/thioredoxin doma 99.4 9.9E-14 3.4E-18 113.0 2.7 78 153-251 12-92 (106)
148 2h8l_A Protein disulfide-isome 99.4 2.9E-11 9.9E-16 113.6 18.4 211 138-374 8-240 (252)
149 2lst_A Thioredoxin; structural 99.0 7.5E-14 2.6E-18 117.1 0.0 99 145-252 11-114 (130)
150 3f9u_A Putative exported cytoc 99.3 9.1E-13 3.1E-17 116.2 5.9 104 139-252 29-164 (172)
151 3iv4_A Putative oxidoreductase 99.3 5.8E-13 2E-17 108.5 3.7 97 139-249 9-111 (112)
152 3dml_A Putative uncharacterize 99.3 7.1E-13 2.4E-17 109.2 3.5 87 152-252 17-108 (116)
153 1ilo_A Conserved hypothetical 99.3 2.4E-12 8.1E-17 97.5 6.0 73 157-249 3-76 (77)
154 1sen_A Thioredoxin-like protei 99.3 1E-12 3.5E-17 115.5 3.0 99 144-252 37-146 (164)
155 2ju5_A Thioredoxin disulfide i 99.3 1E-11 3.6E-16 107.6 9.0 97 145-252 35-150 (154)
156 1lu4_A Soluble secreted antige 99.2 2.5E-11 8.5E-16 101.6 9.6 89 152-252 23-134 (136)
157 2b5x_A YKUV protein, TRXY; thi 99.2 2.6E-11 8.9E-16 102.9 9.4 103 140-252 16-143 (148)
158 1zzo_A RV1677; thioredoxin fol 99.2 3.8E-11 1.3E-15 100.2 9.7 90 152-252 24-133 (136)
159 3ec3_A Protein disulfide-isome 99.2 2.4E-10 8.1E-15 107.2 14.8 205 138-368 8-231 (250)
160 3erw_A Sporulation thiol-disul 99.2 6.4E-11 2.2E-15 100.1 8.3 88 152-249 33-144 (145)
161 2h30_A Thioredoxin, peptide me 99.1 4.4E-11 1.5E-15 103.8 5.8 104 139-252 24-154 (164)
162 3kp9_A Vkorc1/thioredoxin doma 99.1 2.1E-11 7.3E-16 116.4 3.1 76 156-252 200-278 (291)
163 3or5_A Thiol:disulfide interch 99.1 1.9E-10 6.6E-15 99.7 8.9 97 152-252 33-149 (165)
164 3raz_A Thioredoxin-related pro 99.1 2.7E-10 9.3E-15 97.7 9.3 97 152-252 23-138 (151)
165 3ph9_A Anterior gradient prote 99.1 6E-11 2.1E-15 102.7 4.8 90 151-252 42-143 (151)
166 2f9s_A Thiol-disulfide oxidore 99.1 3.7E-10 1.3E-14 96.7 9.0 91 152-252 25-136 (151)
167 3hcz_A Possible thiol-disulfid 99.1 4.2E-10 1.4E-14 95.5 9.0 91 152-252 30-144 (148)
168 4evm_A Thioredoxin family prot 99.1 4E-10 1.4E-14 93.8 8.6 90 152-251 21-136 (138)
169 2fgx_A Putative thioredoxin; N 99.0 2E-10 6.8E-15 93.3 5.9 78 154-249 29-106 (107)
170 3fkf_A Thiol-disulfide oxidore 99.0 8.3E-10 2.8E-14 93.6 9.8 88 152-252 32-144 (148)
171 2l5o_A Putative thioredoxin; s 99.0 9.5E-10 3.3E-14 94.1 10.0 91 152-252 27-139 (153)
172 2lja_A Putative thiol-disulfid 99.0 1E-09 3.5E-14 93.8 10.1 91 152-252 29-141 (152)
173 3ira_A Conserved protein; meth 99.0 6.1E-11 2.1E-15 104.9 2.3 76 143-227 29-115 (173)
174 3ia1_A THIO-disulfide isomeras 99.0 9E-10 3.1E-14 94.4 9.1 87 154-252 31-142 (154)
175 3gl3_A Putative thiol:disulfid 99.0 1.4E-09 4.7E-14 93.0 9.8 91 152-252 27-140 (152)
176 2r2j_A Thioredoxin domain-cont 99.0 1.2E-08 4E-13 101.6 17.7 202 138-368 120-332 (382)
177 2h8l_A Protein disulfide-isome 99.0 5.2E-09 1.8E-13 98.1 13.2 128 256-404 5-139 (252)
178 2b1k_A Thiol:disulfide interch 98.9 1.1E-09 3.7E-14 95.6 7.1 89 151-252 49-158 (168)
179 3ec3_A Protein disulfide-isome 98.9 5.9E-09 2E-13 97.6 12.6 144 256-419 5-162 (250)
180 1kng_A Thiol:disulfide interch 98.9 1.6E-09 5.4E-14 92.9 7.6 89 152-252 41-150 (156)
181 3ha9_A Uncharacterized thiored 98.9 3.7E-09 1.3E-13 91.8 9.7 88 152-252 36-162 (165)
182 3lor_A Thiol-disulfide isomera 98.9 2.5E-09 8.5E-14 92.2 8.5 91 152-252 29-153 (160)
183 1z6n_A Hypothetical protein PA 98.9 9.9E-10 3.4E-14 96.7 5.7 82 140-228 40-122 (167)
184 2lrn_A Thiol:disulfide interch 98.9 3.6E-09 1.2E-13 90.7 9.0 88 152-252 28-139 (152)
185 3lwa_A Secreted thiol-disulfid 98.9 5.2E-09 1.8E-13 92.7 10.0 97 152-252 58-179 (183)
186 1i5g_A Tryparedoxin II; electr 98.9 3.1E-09 1.1E-13 90.1 7.9 71 152-228 27-122 (144)
187 1ttz_A Conserved hypothetical 98.9 8E-10 2.7E-14 86.4 3.7 73 157-252 3-75 (87)
188 3eyt_A Uncharacterized protein 98.9 4.9E-09 1.7E-13 90.2 9.0 92 152-253 27-151 (158)
189 3hdc_A Thioredoxin family prot 98.9 5.3E-09 1.8E-13 90.3 8.4 91 152-252 40-150 (158)
190 1o8x_A Tryparedoxin, TRYX, TXN 98.8 4.5E-09 1.5E-13 89.4 7.5 71 152-228 27-122 (146)
191 4f9z_D Endoplasmic reticulum r 98.8 1.6E-08 5.5E-13 93.2 11.5 138 262-419 14-156 (227)
192 3eur_A Uncharacterized protein 98.8 6E-09 2.1E-13 88.2 7.5 86 153-250 31-141 (142)
193 3kcm_A Thioredoxin family prot 98.8 7.2E-09 2.5E-13 88.6 7.9 91 152-252 27-141 (154)
194 1o73_A Tryparedoxin; electron 98.8 5.6E-09 1.9E-13 88.4 6.8 71 152-228 27-122 (144)
195 3ewl_A Uncharacterized conserv 98.8 7.9E-09 2.7E-13 87.2 7.6 95 152-252 26-139 (142)
196 2lrt_A Uncharacterized protein 98.8 1.3E-08 4.4E-13 87.5 7.9 89 152-250 34-144 (152)
197 3s9f_A Tryparedoxin; thioredox 98.7 1.5E-08 5E-13 88.6 7.3 68 152-225 47-137 (165)
198 2dlx_A UBX domain-containing p 98.7 2.3E-08 8E-13 86.5 7.9 98 144-252 29-134 (153)
199 2hyx_A Protein DIPZ; thioredox 98.7 2.5E-08 8.6E-13 98.0 8.9 92 152-253 81-198 (352)
200 3fw2_A Thiol-disulfide oxidore 98.7 5.8E-08 2E-12 82.8 10.0 88 152-252 32-146 (150)
201 1jfu_A Thiol:disulfide interch 98.7 3.7E-08 1.3E-12 87.2 9.1 97 152-252 59-178 (186)
202 2ywi_A Hypothetical conserved 98.7 2.8E-08 9.5E-13 88.8 7.9 92 152-253 45-173 (196)
203 3kh7_A Thiol:disulfide interch 98.7 3E-08 1E-12 87.5 7.9 88 152-252 57-165 (176)
204 2cvb_A Probable thiol-disulfid 98.7 2.9E-08 1E-12 88.2 7.9 90 152-253 32-158 (188)
205 1hyu_A AHPF, alkyl hydroperoxi 98.6 2.4E-08 8.2E-13 103.4 6.6 95 139-251 102-197 (521)
206 2e7p_A Glutaredoxin; thioredox 98.6 2.7E-09 9.1E-14 87.3 -0.9 89 146-252 13-106 (116)
207 2ggt_A SCO1 protein homolog, m 98.6 2.1E-07 7.1E-12 80.3 9.8 91 152-252 22-159 (164)
208 4fo5_A Thioredoxin-like protei 98.6 8E-08 2.7E-12 81.3 6.6 87 152-250 31-141 (143)
209 2y4t_A DNAJ homolog subfamily 98.6 3.6E-08 1.2E-12 98.1 5.1 63 36-98 381-449 (450)
210 2lus_A Thioredoxion; CR-Trp16, 98.0 8E-09 2.7E-13 87.1 0.0 70 153-228 25-121 (143)
211 2k8s_A Thioredoxin; dimer, str 98.5 1.4E-08 4.9E-13 77.5 1.1 61 157-227 4-64 (80)
212 2vup_A Glutathione peroxidase- 98.5 3E-07 1E-11 82.0 9.9 97 152-252 47-183 (190)
213 2k6v_A Putative cytochrome C o 98.5 5.4E-08 1.9E-12 84.7 4.8 97 152-252 34-171 (172)
214 3u5r_E Uncharacterized protein 98.5 1.7E-07 5.8E-12 85.7 8.2 88 153-252 59-185 (218)
215 1wjk_A C330018D20RIK protein; 98.5 6.6E-08 2.3E-12 77.3 4.8 81 152-252 14-94 (100)
216 2rli_A SCO2 protein homolog, m 98.5 4.1E-07 1.4E-11 79.0 10.3 91 152-252 25-162 (171)
217 2guz_B Mitochondrial import in 98.5 7.1E-08 2.4E-12 70.4 4.4 51 38-89 5-58 (65)
218 2p31_A CL683, glutathione pero 98.5 2.6E-07 9E-12 81.7 8.9 97 152-252 48-179 (181)
219 3cmi_A Peroxiredoxin HYR1; thi 98.5 3.3E-07 1.1E-11 80.1 8.4 96 152-252 31-166 (171)
220 1ego_A Glutaredoxin; electron 98.5 3.4E-07 1.1E-11 70.2 7.0 79 157-252 3-82 (85)
221 2p5q_A Glutathione peroxidase 98.5 4.6E-07 1.6E-11 78.5 8.6 97 152-252 31-166 (170)
222 2ls5_A Uncharacterized protein 97.8 2.9E-08 1E-12 85.5 0.0 95 152-251 32-145 (159)
223 2v1m_A Glutathione peroxidase; 98.4 8.2E-07 2.8E-11 76.8 8.7 97 152-252 30-165 (169)
224 3dwv_A Glutathione peroxidase- 98.4 1.5E-06 5E-11 77.3 10.2 97 152-252 45-181 (187)
225 2l4c_A Endoplasmic reticulum r 98.4 2.1E-06 7.2E-11 71.4 10.3 101 256-365 18-124 (124)
226 1eej_A Thiol:disulfide interch 98.4 4.2E-07 1.4E-11 83.1 6.1 84 152-252 85-209 (216)
227 2obi_A PHGPX, GPX-4, phospholi 98.3 8.5E-07 2.9E-11 78.4 7.9 96 152-251 46-181 (183)
228 1we0_A Alkyl hydroperoxide red 98.3 1.1E-06 3.9E-11 77.8 8.3 91 152-252 30-155 (187)
229 1zof_A Alkyl hydroperoxide-red 98.3 1.2E-06 4E-11 78.6 7.9 91 152-252 32-159 (198)
230 2f8a_A Glutathione peroxidase 98.3 2.1E-06 7.1E-11 77.9 9.5 43 152-194 46-89 (208)
231 3gyk_A 27KDA outer membrane pr 98.3 1.5E-06 5.1E-11 76.1 8.1 86 151-252 20-171 (175)
232 2l4c_A Endoplasmic reticulum r 98.3 9.1E-07 3.1E-11 73.6 6.1 95 138-252 23-122 (124)
233 3drn_A Peroxiredoxin, bacterio 98.3 1.6E-06 5.4E-11 75.0 7.5 88 153-250 28-145 (161)
234 3ed3_A Protein disulfide-isome 98.2 8.1E-06 2.8E-10 78.2 12.7 144 262-418 22-188 (298)
235 2bmx_A Alkyl hydroperoxidase C 98.2 2.5E-06 8.6E-11 76.2 8.4 91 152-252 44-168 (195)
236 1xvw_A Hypothetical protein RV 98.2 1.7E-06 5.7E-11 74.4 6.8 90 152-251 35-157 (160)
237 2gs3_A PHGPX, GPX-4, phospholi 98.2 2.6E-06 8.8E-11 75.5 8.2 96 152-251 48-183 (185)
238 2qsi_A Putative hydrogenase ex 98.2 5.8E-06 2E-10 69.7 9.2 97 262-364 20-122 (137)
239 3kij_A Probable glutathione pe 98.2 5E-06 1.7E-10 73.2 9.1 97 152-252 37-168 (180)
240 2qc7_A ERP31, ERP28, endoplasm 98.2 6.6E-06 2.3E-10 76.3 9.9 99 262-364 10-118 (240)
241 1t3b_A Thiol:disulfide interch 98.2 1.7E-06 5.9E-11 78.7 5.7 84 152-252 85-209 (211)
242 3ga4_A Dolichyl-diphosphooligo 98.1 1E-05 3.5E-10 71.4 9.8 111 262-376 23-164 (178)
243 1qmv_A Human thioredoxin perox 98.1 6E-06 2E-10 73.9 8.2 91 152-252 33-161 (197)
244 1xzo_A BSSCO, hypothetical pro 98.1 2.1E-05 7E-10 68.3 11.3 97 152-252 32-170 (174)
245 1h75_A Glutaredoxin-like prote 98.1 1.5E-06 5.1E-11 65.9 3.4 72 157-250 3-74 (81)
246 1un2_A DSBA, thiol-disulfide i 98.1 7.1E-07 2.4E-11 80.4 1.0 44 152-195 112-158 (197)
247 2qgv_A Hydrogenase-1 operon pr 98.1 9.3E-06 3.2E-10 68.7 7.6 96 262-364 22-124 (140)
248 1r7h_A NRDH-redoxin; thioredox 98.0 8.5E-06 2.9E-10 60.4 6.3 71 157-249 3-73 (75)
249 1zye_A Thioredoxin-dependent p 98.0 1.4E-05 4.9E-10 73.0 9.0 90 153-252 56-183 (220)
250 2djk_A PDI, protein disulfide- 98.0 2E-05 7E-10 65.8 9.2 108 256-368 5-118 (133)
251 2c0g_A ERP29 homolog, windbeut 98.0 2.4E-05 8.3E-10 72.8 10.4 98 262-364 21-131 (248)
252 3zzx_A Thioredoxin; oxidoreduc 98.0 3.3E-05 1.1E-09 62.0 9.8 97 262-364 5-105 (105)
253 2h01_A 2-Cys peroxiredoxin; th 98.0 1.4E-05 4.7E-10 71.1 8.3 91 152-252 30-157 (192)
254 2b7k_A SCO1 protein; metalloch 98.0 2.2E-05 7.5E-10 70.4 9.6 93 152-254 40-179 (200)
255 3hd5_A Thiol:disulfide interch 98.0 1.2E-05 4.1E-10 71.7 7.4 44 151-194 23-66 (195)
256 1uul_A Tryparedoxin peroxidase 97.9 1.8E-05 6.3E-10 71.0 7.4 91 153-252 36-163 (202)
257 3h93_A Thiol:disulfide interch 97.9 1.3E-05 4.4E-10 71.3 6.2 42 152-193 24-65 (192)
258 3h79_A Thioredoxin-like protei 97.9 5E-05 1.7E-09 62.5 9.2 98 262-363 20-126 (127)
259 1v58_A Thiol:disulfide interch 97.9 1.4E-05 4.8E-10 74.1 6.3 89 152-252 96-231 (241)
260 2jsy_A Probable thiol peroxida 97.9 5.8E-05 2E-09 65.2 9.8 91 152-252 43-165 (167)
261 2dml_A Protein disulfide-isome 97.9 0.00013 4.5E-09 59.9 11.2 82 280-363 38-122 (130)
262 1kte_A Thioltransferase; redox 97.8 4.9E-06 1.7E-10 66.4 2.1 69 146-227 5-77 (105)
263 1nm3_A Protein HI0572; hybrid, 97.8 0.00025 8.5E-09 65.3 13.7 56 152-207 32-91 (241)
264 2i81_A 2-Cys peroxiredoxin; st 97.8 4.1E-05 1.4E-09 69.5 7.8 92 152-252 51-178 (213)
265 2es7_A Q8ZP25_salty, putative 97.8 6.6E-05 2.3E-09 63.7 8.6 98 262-366 22-126 (142)
266 3ztl_A Thioredoxin peroxidase; 97.8 5.6E-05 1.9E-09 69.0 8.4 92 152-252 68-196 (222)
267 3gkn_A Bacterioferritin comigr 97.8 4.4E-05 1.5E-09 65.6 6.9 96 153-251 35-159 (163)
268 2znm_A Thiol:disulfide interch 97.8 9.1E-05 3.1E-09 65.8 9.2 41 152-192 21-61 (195)
269 2a4v_A Peroxiredoxin DOT5; yea 97.7 6.1E-05 2.1E-09 64.6 6.6 93 154-251 36-151 (159)
270 2c0d_A Thioredoxin peroxidase 97.7 0.00012 4.1E-09 66.9 8.8 98 152-252 55-182 (221)
271 3tco_A Thioredoxin (TRXA-1); d 97.6 0.00031 1E-08 55.4 9.7 95 262-363 9-107 (109)
272 2i3y_A Epididymal secretory gl 97.6 0.00044 1.5E-08 62.9 11.9 42 152-194 55-97 (215)
273 2voc_A Thioredoxin; electron t 97.6 0.00029 9.8E-09 56.4 9.4 84 280-366 19-106 (112)
274 1oaz_A Thioredoxin 1; immune s 97.6 0.00019 6.4E-09 59.0 8.0 68 292-362 53-120 (123)
275 1x5d_A Protein disulfide-isome 97.6 0.00054 1.9E-08 56.2 10.8 83 279-364 26-116 (133)
276 1xvq_A Thiol peroxidase; thior 97.6 0.00035 1.2E-08 60.9 10.1 41 152-194 43-84 (175)
277 1x5e_A Thioredoxin domain cont 97.6 0.00045 1.5E-08 56.4 10.1 99 262-369 12-114 (126)
278 3uvt_A Thioredoxin domain-cont 97.6 0.00032 1.1E-08 55.6 8.8 95 262-363 10-110 (111)
279 2dj1_A Protein disulfide-isome 97.6 0.0005 1.7E-08 57.1 10.4 97 262-366 22-125 (140)
280 2i4a_A Thioredoxin; acidophIle 97.5 0.00043 1.5E-08 54.4 9.4 83 278-363 20-106 (107)
281 3m9j_A Thioredoxin; oxidoreduc 97.5 0.00051 1.7E-08 53.8 9.7 96 262-363 5-104 (105)
282 2pn8_A Peroxiredoxin-4; thiore 97.5 0.00019 6.7E-09 64.9 8.1 97 153-252 48-175 (211)
283 2trx_A Thioredoxin; electron t 97.5 0.0004 1.4E-08 54.8 9.1 68 293-363 39-106 (108)
284 1w4v_A Thioredoxin, mitochondr 97.5 0.00034 1.2E-08 56.7 8.8 68 293-363 50-117 (119)
285 3qfa_C Thioredoxin; protein-pr 97.5 0.00054 1.8E-08 55.3 9.9 91 268-363 22-115 (116)
286 3gnj_A Thioredoxin domain prot 97.5 0.00033 1.1E-08 55.5 8.4 81 280-363 25-108 (111)
287 3die_A Thioredoxin, TRX; elect 97.5 0.0004 1.4E-08 54.5 8.7 68 293-363 38-105 (106)
288 1n8j_A AHPC, alkyl hydroperoxi 97.5 0.00027 9.3E-09 62.5 8.5 97 153-252 30-154 (186)
289 3apq_A DNAJ homolog subfamily 97.5 0.0005 1.7E-08 61.9 10.4 90 280-372 117-209 (210)
290 1thx_A Thioredoxin, thioredoxi 97.5 0.00052 1.8E-08 54.6 9.4 82 279-363 26-111 (115)
291 2hze_A Glutaredoxin-1; thiored 97.5 4.2E-05 1.4E-09 62.2 2.8 66 146-227 12-84 (114)
292 1mek_A Protein disulfide isome 97.5 0.00056 1.9E-08 54.7 9.7 97 262-364 12-116 (120)
293 2klx_A Glutaredoxin; thioredox 97.5 9.1E-05 3.1E-09 57.1 4.6 56 156-226 7-63 (89)
294 3qou_A Protein YBBN; thioredox 97.5 0.001 3.5E-08 62.6 12.5 102 259-364 9-113 (287)
295 2r37_A Glutathione peroxidase 97.5 0.00086 2.9E-08 60.5 11.3 42 152-194 37-79 (207)
296 3bj5_A Protein disulfide-isome 97.4 0.00042 1.4E-08 59.1 8.5 107 137-253 15-126 (147)
297 2o8v_B Thioredoxin 1; disulfid 97.4 0.00046 1.6E-08 56.9 8.5 83 278-363 40-126 (128)
298 3aps_A DNAJ homolog subfamily 97.4 0.0002 6.8E-09 58.1 6.2 81 280-363 24-111 (122)
299 2cq9_A GLRX2 protein, glutared 97.4 9.9E-05 3.4E-09 61.6 4.2 67 145-227 19-89 (130)
300 2av4_A Thioredoxin-like protei 97.4 0.00043 1.5E-08 59.4 8.2 99 262-363 26-137 (160)
301 1xwb_A Thioredoxin; dimerizati 97.4 0.00083 2.8E-08 52.6 9.5 96 262-362 5-104 (106)
302 2yzu_A Thioredoxin; redox prot 97.4 0.00072 2.5E-08 53.1 9.1 95 262-363 6-104 (109)
303 3hxs_A Thioredoxin, TRXP; elec 97.4 0.00057 1.9E-08 56.9 8.8 83 278-363 51-137 (141)
304 1nsw_A Thioredoxin, TRX; therm 97.4 0.00076 2.6E-08 52.8 8.9 67 293-362 36-102 (105)
305 3hz4_A Thioredoxin; NYSGXRC, P 97.4 0.0004 1.4E-08 58.1 7.6 96 262-363 11-110 (140)
306 2e0q_A Thioredoxin; electron t 97.4 0.00087 3E-08 52.0 9.1 67 293-363 35-101 (104)
307 3p2a_A Thioredoxin 2, putative 97.4 0.00085 2.9E-08 56.5 9.6 95 262-363 43-141 (148)
308 1gh2_A Thioredoxin-like protei 97.4 0.0016 5.5E-08 51.3 10.7 96 262-363 6-105 (107)
309 1t00_A Thioredoxin, TRX; redox 97.4 0.00062 2.1E-08 54.1 8.2 68 293-363 42-109 (112)
310 4euy_A Uncharacterized protein 97.4 0.0003 1E-08 55.6 6.2 82 278-363 18-103 (105)
311 2vim_A Thioredoxin, TRX; thior 97.3 0.0015 5.1E-08 50.9 10.1 96 262-363 4-103 (104)
312 3ul3_B Thioredoxin, thioredoxi 97.3 0.00054 1.9E-08 56.3 7.8 83 278-363 42-128 (128)
313 2i1u_A Thioredoxin, TRX, MPT46 97.3 0.00054 1.8E-08 55.2 7.6 67 293-362 49-115 (121)
314 1ep7_A Thioredoxin CH1, H-type 97.3 0.0011 3.7E-08 52.6 9.2 67 293-363 43-109 (112)
315 2l5l_A Thioredoxin; structural 97.3 0.0012 4.2E-08 54.7 9.9 84 279-365 39-126 (136)
316 2oe3_A Thioredoxin-3; electron 97.3 0.00097 3.3E-08 53.7 8.9 93 262-362 17-113 (114)
317 2rem_A Disulfide oxidoreductas 97.3 0.00042 1.4E-08 61.2 7.3 42 152-193 24-65 (193)
318 1z6m_A Conserved hypothetical 97.3 0.00054 1.9E-08 59.6 7.9 41 152-192 26-68 (175)
319 2ppt_A Thioredoxin-2; thiredox 97.3 0.00075 2.6E-08 57.8 8.6 81 280-363 67-150 (155)
320 3ixr_A Bacterioferritin comigr 97.3 0.00037 1.3E-08 61.1 6.8 55 153-207 51-107 (179)
321 1dby_A Chloroplast thioredoxin 97.3 0.00089 3.1E-08 52.6 8.4 67 293-362 38-104 (107)
322 3me7_A Putative uncharacterize 97.3 0.0011 3.8E-08 57.5 9.7 97 153-252 28-160 (170)
323 2ht9_A Glutaredoxin-2; thiored 97.3 0.00016 5.4E-09 61.7 4.0 67 145-227 41-111 (146)
324 1fb6_A Thioredoxin M; electron 97.3 0.001 3.4E-08 52.0 8.5 67 293-362 37-103 (105)
325 3c1r_A Glutaredoxin-1; oxidize 97.3 0.0001 3.5E-09 60.4 2.6 70 145-227 17-91 (118)
326 4g2e_A Peroxiredoxin; redox pr 97.3 0.00028 9.6E-09 60.5 5.5 56 152-207 29-86 (157)
327 3qpm_A Peroxiredoxin; oxidored 97.3 0.00082 2.8E-08 62.1 8.8 98 152-252 76-204 (240)
328 2l57_A Uncharacterized protein 97.2 0.0012 4.1E-08 53.8 8.8 72 293-364 45-116 (126)
329 3gv1_A Disulfide interchange p 97.2 0.00041 1.4E-08 59.1 6.0 83 151-252 12-137 (147)
330 3ic4_A Glutaredoxin (GRX-1); s 97.2 0.00034 1.2E-08 54.0 5.0 72 157-250 14-91 (92)
331 2yan_A Glutaredoxin-3; oxidore 97.2 0.00019 6.6E-09 57.3 3.6 66 145-226 9-80 (105)
332 3iv4_A Putative oxidoreductase 97.2 0.00071 2.4E-08 54.7 6.7 94 262-360 11-111 (112)
333 1q98_A Thiol peroxidase, TPX; 97.2 0.00043 1.5E-08 59.7 5.7 54 153-207 43-97 (165)
334 1fov_A Glutaredoxin 3, GRX3; a 97.2 0.00033 1.1E-08 52.6 4.3 71 157-251 3-74 (82)
335 2j23_A Thioredoxin; immune pro 97.2 0.0012 4E-08 53.7 7.9 95 262-363 20-119 (121)
336 3f3q_A Thioredoxin-1; His TAG, 97.1 0.0018 6.3E-08 51.4 8.8 81 278-363 24-108 (109)
337 2wz9_A Glutaredoxin-3; protein 97.1 0.0031 1.1E-07 53.5 10.7 97 262-364 17-117 (153)
338 2vlu_A Thioredoxin, thioredoxi 97.1 0.0016 5.6E-08 52.5 8.5 66 293-363 53-118 (122)
339 3a2v_A Probable peroxiredoxin; 97.1 0.00052 1.8E-08 63.8 6.0 89 155-252 36-160 (249)
340 1v98_A Thioredoxin; oxidoreduc 97.1 0.0014 4.8E-08 54.6 8.2 81 280-363 53-136 (140)
341 1syr_A Thioredoxin; SGPP, stru 97.1 0.0024 8.4E-08 50.8 9.3 92 262-362 14-109 (112)
342 3tjj_A Peroxiredoxin-4; thiore 97.1 0.0013 4.4E-08 61.3 8.7 98 152-252 90-218 (254)
343 2xc2_A Thioredoxinn; oxidoredu 97.1 0.0027 9.2E-08 50.9 9.5 95 262-363 18-116 (117)
344 1tp9_A Peroxiredoxin, PRX D (t 97.1 0.00083 2.8E-08 57.8 6.6 56 152-207 34-93 (162)
345 2dj0_A Thioredoxin-related tra 97.1 0.00073 2.5E-08 56.2 6.0 96 262-362 12-118 (137)
346 2pwj_A Mitochondrial peroxired 97.1 0.00054 1.9E-08 59.7 5.4 63 151-219 42-108 (171)
347 2djj_A PDI, protein disulfide- 97.1 0.001 3.5E-08 53.6 6.7 79 280-363 28-115 (121)
348 2l6c_A Thioredoxin; oxidoreduc 97.1 0.0015 5.1E-08 52.1 7.6 67 293-363 38-104 (110)
349 3hz8_A Thiol:disulfide interch 97.1 0.00028 9.5E-09 62.9 3.3 43 152-194 23-65 (193)
350 2yzh_A Probable thiol peroxida 97.1 0.00045 1.5E-08 59.8 4.6 61 153-220 47-108 (171)
351 3d6i_A Monothiol glutaredoxin- 97.0 0.0034 1.2E-07 49.8 9.3 98 262-363 5-107 (112)
352 3p7x_A Probable thiol peroxida 97.0 0.00079 2.7E-08 58.0 5.9 54 153-208 46-100 (166)
353 1r26_A Thioredoxin; redox-acti 97.0 0.0029 9.9E-08 51.9 9.1 95 262-363 24-121 (125)
354 2wfc_A Peroxiredoxin 5, PRDX5; 97.0 0.00084 2.9E-08 58.3 6.0 56 152-207 30-89 (167)
355 2khp_A Glutaredoxin; thioredox 97.0 0.00042 1.4E-08 53.5 3.5 57 156-226 7-64 (92)
356 1psq_A Probable thiol peroxida 97.0 0.00043 1.5E-08 59.5 3.9 55 152-207 41-96 (163)
357 2dj3_A Protein disulfide-isome 97.0 0.00085 2.9E-08 55.2 5.5 85 278-364 25-117 (133)
358 3dxb_A Thioredoxin N-terminall 97.0 0.0023 8E-08 58.0 8.9 97 262-364 17-117 (222)
359 3nzn_A Glutaredoxin; structura 97.0 0.0018 6.1E-08 51.3 6.9 75 154-249 21-101 (103)
360 4gqc_A Thiol peroxidase, perox 96.9 0.00045 1.5E-08 59.8 3.5 58 151-208 31-90 (164)
361 3zrd_A Thiol peroxidase; oxido 96.9 0.001 3.5E-08 59.5 5.3 55 152-207 77-132 (200)
362 3evi_A Phosducin-like protein 96.9 0.0034 1.2E-07 51.2 8.1 95 262-364 8-113 (118)
363 3emx_A Thioredoxin; structural 96.8 0.0032 1.1E-07 52.2 8.0 95 262-364 21-125 (135)
364 2pu9_C TRX-F, thioredoxin F-ty 96.8 0.011 3.8E-07 46.6 10.9 96 262-363 10-109 (111)
365 1zma_A Bacterocin transport ac 96.8 0.0023 8E-08 51.4 6.8 79 280-361 32-117 (118)
366 3l9v_A Putative thiol-disulfid 96.8 0.00029 1E-08 62.5 1.3 42 153-194 14-58 (189)
367 1fo5_A Thioredoxin; disulfide 96.8 0.0069 2.4E-07 45.1 8.9 67 290-363 18-84 (85)
368 3qmx_A Glutaredoxin A, glutare 96.8 0.0014 4.8E-08 51.7 5.1 60 153-226 14-75 (99)
369 2fwh_A Thiol:disulfide interch 96.8 0.0057 1.9E-07 50.5 9.0 65 297-362 57-125 (134)
370 3q6o_A Sulfhydryl oxidase 1; p 96.8 0.0036 1.2E-07 57.5 8.3 83 280-363 33-125 (244)
371 1nho_A Probable thioredoxin; b 96.7 0.0069 2.3E-07 45.1 8.3 76 281-363 5-83 (85)
372 3rhb_A ATGRXC5, glutaredoxin-C 96.7 0.00093 3.2E-08 53.8 3.5 64 148-227 14-82 (113)
373 2kuc_A Putative disulphide-iso 96.7 0.0027 9.2E-08 51.8 6.4 62 305-366 61-122 (130)
374 3uma_A Hypothetical peroxiredo 96.7 0.0014 4.6E-08 58.0 4.8 55 153-207 57-114 (184)
375 2ec4_A FAS-associated factor 1 96.7 0.0091 3.1E-07 52.4 9.9 96 151-252 53-166 (178)
376 1faa_A Thioredoxin F; electron 96.7 0.012 4.1E-07 47.4 10.1 96 262-363 23-122 (124)
377 2lqo_A Putative glutaredoxin R 96.7 0.0056 1.9E-07 47.7 7.4 76 156-252 5-82 (92)
378 3bj5_A Protein disulfide-isome 96.6 0.021 7.2E-07 48.3 11.6 116 256-374 13-137 (147)
379 1wik_A Thioredoxin-like protei 96.6 0.0017 5.9E-08 52.0 4.5 68 144-227 6-79 (109)
380 3t58_A Sulfhydryl oxidase 1; o 96.6 0.018 6.1E-07 59.2 13.1 84 280-363 33-125 (519)
381 1wou_A Thioredoxin -related pr 96.6 0.006 2E-07 49.6 7.8 68 293-362 50-122 (123)
382 3cxg_A Putative thioredoxin; m 96.6 0.0059 2E-07 50.5 7.8 96 262-363 25-127 (133)
383 1xfl_A Thioredoxin H1; AT3G510 96.6 0.013 4.5E-07 47.6 9.8 97 262-363 21-122 (124)
384 3gix_A Thioredoxin-like protei 96.6 0.0082 2.8E-07 50.8 8.7 84 278-363 23-119 (149)
385 1qgv_A Spliceosomal protein U5 96.6 0.007 2.4E-07 50.8 8.1 84 278-363 23-119 (142)
386 1hyu_A AHPF, alkyl hydroperoxi 96.5 0.029 9.9E-07 57.6 14.2 176 153-363 18-198 (521)
387 1ti3_A Thioredoxin H, PTTRXH1; 96.5 0.0072 2.5E-07 47.7 7.5 97 262-363 9-110 (113)
388 3mng_A Peroxiredoxin-5, mitoch 96.5 0.0035 1.2E-07 54.8 5.9 55 153-207 43-101 (173)
389 2yj7_A LPBCA thioredoxin; oxid 95.5 0.00046 1.6E-08 53.8 0.0 68 292-362 37-104 (106)
390 2trc_P Phosducin, MEKA, PP33; 96.4 0.0047 1.6E-07 56.0 6.7 92 268-364 110-212 (217)
391 3feu_A Putative lipoprotein; a 96.4 0.0011 3.6E-08 58.7 2.1 40 153-194 22-61 (185)
392 2vm1_A Thioredoxin, thioredoxi 96.4 0.017 5.9E-07 45.8 9.2 97 262-363 11-112 (118)
393 1prx_A HORF6; peroxiredoxin, h 96.4 0.0079 2.7E-07 54.7 7.8 42 154-195 33-75 (224)
394 3d22_A TRXH4, thioredoxin H-ty 96.4 0.0085 2.9E-07 49.5 7.3 68 293-365 65-132 (139)
395 3fk8_A Disulphide isomerase; A 96.3 0.0067 2.3E-07 49.7 6.6 70 293-362 48-130 (133)
396 2dbc_A PDCL2, unnamed protein 96.3 0.01 3.4E-07 49.2 7.6 95 262-364 15-120 (135)
397 2v2g_A Peroxiredoxin 6; oxidor 96.3 0.0086 2.9E-07 54.9 7.8 97 153-252 29-163 (233)
398 3msz_A Glutaredoxin 1; alpha-b 96.2 0.0034 1.2E-07 47.6 3.4 80 156-252 5-85 (89)
399 1wmj_A Thioredoxin H-type; str 96.1 0.0061 2.1E-07 49.5 5.2 97 262-363 19-120 (130)
400 2f51_A Thioredoxin; electron t 96.1 0.012 4.2E-07 47.3 6.6 70 293-366 42-114 (118)
401 3ctg_A Glutaredoxin-2; reduced 95.9 0.0021 7.3E-08 53.3 1.5 70 144-226 28-102 (129)
402 3dml_A Putative uncharacterize 95.8 0.015 5E-07 47.3 6.0 56 307-363 53-108 (116)
403 1a0r_P Phosducin, MEKA, PP33; 95.8 0.022 7.7E-07 52.5 7.7 92 268-364 123-225 (245)
404 2lst_A Thioredoxin; structural 94.7 0.0018 6.1E-08 53.0 0.0 71 292-362 37-113 (130)
405 1zzo_A RV1677; thioredoxin fol 95.7 0.041 1.4E-06 44.3 8.3 67 294-362 45-132 (136)
406 3erw_A Sporulation thiol-disul 95.5 0.032 1.1E-06 45.7 7.2 68 294-361 54-145 (145)
407 3qcp_A QSOX from trypanosoma b 95.5 0.0058 2E-07 61.8 3.0 90 262-354 28-129 (470)
408 1xcc_A 1-Cys peroxiredoxin; un 95.5 0.014 4.9E-07 52.9 5.4 95 155-252 34-164 (220)
409 1lu4_A Soluble secreted antige 95.5 0.051 1.8E-06 43.9 8.4 67 294-362 44-133 (136)
410 2b5x_A YKUV protein, TRXY; thi 95.5 0.053 1.8E-06 44.4 8.4 69 294-362 49-142 (148)
411 3h8q_A Thioredoxin reductase 3 95.4 0.011 3.9E-07 47.6 3.9 66 145-226 9-78 (114)
412 1ilo_A Conserved hypothetical 95.2 0.045 1.5E-06 39.8 6.3 70 281-360 3-76 (77)
413 3l9s_A Thiol:disulfide interch 95.0 0.0091 3.1E-07 52.9 2.4 42 153-194 21-65 (191)
414 4hde_A SCO1/SENC family lipopr 95.0 0.15 5.1E-06 43.8 10.2 43 152-194 31-77 (170)
415 2f9s_A Thiol-disulfide oxidore 94.7 0.1 3.4E-06 43.3 8.0 70 294-363 46-136 (151)
416 2lja_A Putative thiol-disulfid 94.7 0.13 4.6E-06 42.4 8.7 71 293-363 49-141 (152)
417 4f82_A Thioredoxin reductase; 94.6 0.03 1E-06 48.9 4.5 57 151-207 46-105 (176)
418 3l4n_A Monothiol glutaredoxin- 94.4 0.02 7E-07 47.2 2.7 69 145-226 6-78 (127)
419 2ju5_A Thioredoxin disulfide i 94.1 0.12 4.2E-06 43.5 7.2 42 320-362 106-149 (154)
420 3keb_A Probable thiol peroxida 94.1 0.051 1.8E-06 49.4 5.0 51 153-207 48-104 (224)
421 2l5o_A Putative thioredoxin; s 94.0 0.19 6.3E-06 41.6 8.0 44 320-363 96-139 (153)
422 4evm_A Thioredoxin family prot 93.9 0.23 8E-06 39.6 8.4 43 320-362 94-136 (138)
423 3raz_A Thioredoxin-related pro 93.7 0.25 8.7E-06 40.9 8.5 43 320-362 93-137 (151)
424 4dvc_A Thiol:disulfide interch 93.6 0.046 1.6E-06 47.1 3.7 41 152-192 20-60 (184)
425 3fkf_A Thiol-disulfide oxidore 93.3 0.35 1.2E-05 39.4 8.6 81 279-362 34-143 (148)
426 3ia1_A THIO-disulfide isomeras 93.3 0.33 1.1E-05 40.1 8.5 45 319-363 98-142 (154)
427 3hcz_A Possible thiol-disulfid 93.1 0.49 1.7E-05 38.5 9.2 81 278-360 31-141 (148)
428 3kp8_A Vkorc1/thioredoxin doma 92.7 0.079 2.7E-06 41.9 3.5 38 319-362 55-92 (106)
429 2fgx_A Putative thioredoxin; N 92.4 0.26 8.9E-06 39.2 6.2 60 293-360 47-106 (107)
430 3c7m_A Thiol:disulfide interch 92.4 0.1 3.6E-06 45.4 4.2 43 152-194 16-59 (195)
431 3or5_A Thiol:disulfide interch 92.3 0.54 1.9E-05 39.1 8.6 37 327-363 113-149 (165)
432 1nm3_A Protein HI0572; hybrid, 92.2 0.14 4.8E-06 46.5 5.0 57 154-222 169-225 (241)
433 3gl3_A Putative thiol:disulfid 92.1 0.56 1.9E-05 38.5 8.3 43 321-363 96-140 (152)
434 2ct6_A SH3 domain-binding glut 91.8 0.23 7.9E-06 39.5 5.3 57 156-226 9-80 (111)
435 3lor_A Thiol-disulfide isomera 91.7 0.83 2.8E-05 37.8 9.0 41 322-362 112-152 (160)
436 3eyt_A Uncharacterized protein 91.5 0.79 2.7E-05 37.9 8.6 43 321-363 108-150 (158)
437 1aba_A Glutaredoxin; electron 91.4 0.2 7E-06 37.7 4.4 57 157-226 2-73 (87)
438 2wci_A Glutaredoxin-4; redox-a 91.1 0.13 4.3E-06 42.9 3.0 65 147-226 29-98 (135)
439 2h30_A Thioredoxin, peptide me 90.6 0.65 2.2E-05 38.7 7.3 44 320-363 111-154 (164)
440 2dlx_A UBX domain-containing p 90.6 1.7 5.9E-05 36.6 9.9 56 306-362 77-133 (153)
441 2lrn_A Thiol:disulfide interch 90.1 0.92 3.1E-05 37.4 7.7 41 319-362 98-138 (152)
442 3kcm_A Thioredoxin family prot 90.0 1.1 3.7E-05 36.8 8.1 42 321-362 97-140 (154)
443 3zyw_A Glutaredoxin-3; metal b 89.7 0.25 8.6E-06 39.4 3.6 63 148-226 11-79 (111)
444 1kng_A Thiol:disulfide interch 89.6 0.65 2.2E-05 38.2 6.3 44 320-363 107-150 (156)
445 2axo_A Hypothetical protein AT 88.8 0.8 2.7E-05 42.6 6.8 81 155-252 44-141 (270)
446 2pzi_A Probable serine/threoni 88.7 0.48 1.7E-05 50.0 6.0 53 29-86 621-675 (681)
447 3f9u_A Putative exported cytoc 88.7 1.2 4E-05 37.7 7.5 40 323-362 123-163 (172)
448 3hdc_A Thioredoxin family prot 88.7 1.8 6.3E-05 35.8 8.6 71 294-364 61-151 (158)
449 1t1v_A SH3BGRL3, SH3 domain-bi 88.5 0.63 2.2E-05 35.4 5.1 58 157-226 4-68 (93)
450 3lwa_A Secreted thiol-disulfid 88.2 1.8 6E-05 36.9 8.3 36 327-362 143-178 (183)
451 3ha9_A Uncharacterized thiored 87.7 1.5 5.2E-05 36.5 7.5 40 321-362 121-161 (165)
452 3ipz_A Monothiol glutaredoxin- 87.6 0.49 1.7E-05 37.4 4.0 50 163-226 31-81 (109)
453 3sbc_A Peroxiredoxin TSA1; alp 87.6 0.83 2.9E-05 41.0 5.9 52 153-204 52-105 (216)
454 3gha_A Disulfide bond formatio 87.5 0.43 1.5E-05 42.3 4.0 43 152-194 28-73 (202)
455 3fw2_A Thiol-disulfide oxidore 87.4 3.6 0.00012 33.5 9.6 40 320-362 106-145 (150)
456 3gx8_A Monothiol glutaredoxin- 87.2 0.87 3E-05 36.8 5.4 53 163-226 29-82 (121)
457 1xiy_A Peroxiredoxin, pfaop; a 86.8 1.1 3.6E-05 39.2 6.0 55 153-207 43-102 (182)
458 2b1k_A Thiol:disulfide interch 86.8 1.2 4.2E-05 37.2 6.4 43 320-362 115-157 (168)
459 2wem_A Glutaredoxin-related pr 86.7 0.5 1.7E-05 38.2 3.6 50 163-226 33-84 (118)
460 1ttz_A Conserved hypothetical 86.4 0.85 2.9E-05 34.5 4.6 46 309-362 29-74 (87)
461 3tue_A Tryparedoxin peroxidase 85.4 2.1 7.1E-05 38.5 7.4 53 153-205 56-110 (219)
462 3f4s_A Alpha-DSBA1, putative u 85.4 0.8 2.7E-05 41.3 4.7 43 152-194 38-83 (226)
463 1sen_A Thioredoxin-like protei 85.1 0.46 1.6E-05 40.4 2.7 68 294-362 66-145 (164)
464 2ywi_A Hypothetical conserved 84.8 2.1 7.2E-05 36.7 7.1 44 320-363 120-172 (196)
465 2cvb_A Probable thiol-disulfid 84.5 4.9 0.00017 34.2 9.3 60 320-383 106-175 (188)
466 4eo3_A Bacterioferritin comigr 83.7 1.1 3.9E-05 42.7 5.1 94 153-252 24-137 (322)
467 3kh7_A Thiol:disulfide interch 83.4 4.5 0.00015 34.3 8.5 43 320-362 122-164 (176)
468 3gn3_A Putative protein-disulf 83.3 0.78 2.7E-05 39.9 3.5 42 151-192 12-54 (182)
469 3s9f_A Tryparedoxin; thioredox 82.9 2 6.7E-05 36.2 5.9 48 293-340 67-138 (165)
470 2xhf_A Peroxiredoxin 5; oxidor 82.3 2.4 8.3E-05 36.4 6.2 55 153-207 42-99 (171)
471 1o8x_A Tryparedoxin, TRYX, TXN 81.8 2.4 8.1E-05 34.5 5.9 46 293-338 47-116 (146)
472 1o73_A Tryparedoxin; electron 81.7 2.2 7.7E-05 34.4 5.6 46 293-338 47-116 (144)
473 3ph9_A Anterior gradient prote 81.6 3.6 0.00012 34.5 6.9 54 308-362 79-139 (151)
474 3bci_A Disulfide bond protein 81.2 1.4 4.9E-05 37.8 4.4 41 152-192 10-53 (186)
475 2hyx_A Protein DIPZ; thioredox 81.0 3.4 0.00012 39.9 7.4 44 320-363 154-197 (352)
476 1jfu_A Thiol:disulfide interch 80.8 6.8 0.00023 33.1 8.7 69 294-362 80-177 (186)
477 1i5g_A Tryparedoxin II; electr 80.1 2.7 9.3E-05 34.0 5.6 46 293-338 47-116 (144)
478 2ggt_A SCO1 protein homolog, m 80.0 3.6 0.00012 33.9 6.5 42 321-362 102-158 (164)
479 3kp9_A Vkorc1/thioredoxin doma 79.8 0.57 2E-05 44.1 1.4 73 280-362 200-277 (291)
480 3gmf_A Protein-disulfide isome 79.7 1.7 5.9E-05 38.4 4.5 41 152-192 14-57 (205)
481 3tdg_A DSBG, putative uncharac 79.1 0.84 2.9E-05 42.5 2.2 28 152-179 146-173 (273)
482 1z6n_A Hypothetical protein PA 78.9 5.6 0.00019 33.8 7.4 79 279-362 55-140 (167)
483 1wjk_A C330018D20RIK protein; 78.4 7.7 0.00026 29.6 7.5 53 305-363 42-94 (100)
484 2rli_A SCO2 protein homolog, m 77.4 6.3 0.00022 32.6 7.3 42 321-362 105-161 (171)
485 3ewl_A Uncharacterized conserv 74.6 6.6 0.00023 31.3 6.4 38 323-363 102-139 (142)
486 2lrt_A Uncharacterized protein 74.6 8.5 0.00029 31.5 7.2 34 322-355 105-138 (152)
487 2in3_A Hypothetical protein; D 71.3 4 0.00014 35.7 4.6 43 200-252 166-208 (216)
488 2e7p_A Glutaredoxin; thioredox 69.8 6.2 0.00021 30.5 5.0 41 320-363 63-106 (116)
489 1u6t_A SH3 domain-binding glut 69.3 12 0.00042 30.1 6.6 49 157-206 2-52 (121)
490 3u5r_E Uncharacterized protein 67.1 27 0.00094 30.4 9.3 69 293-363 78-185 (218)
491 1zof_A Alkyl hydroperoxide-red 66.3 12 0.00042 32.0 6.7 44 320-363 107-159 (198)
492 3cmi_A Peroxiredoxin HYR1; thi 66.3 18 0.00062 30.0 7.6 38 325-362 122-165 (171)
493 3eur_A Uncharacterized protein 66.3 17 0.00059 28.9 7.2 38 322-362 105-142 (142)
494 1we0_A Alkyl hydroperoxide red 64.3 19 0.00066 30.3 7.5 43 320-362 102-154 (187)
495 2k6v_A Putative cytochrome C o 63.8 8.3 0.00028 31.8 4.9 33 329-362 136-170 (172)
496 2bmx_A Alkyl hydroperoxidase C 63.1 37 0.0013 28.8 9.2 43 320-362 116-167 (195)
497 3drn_A Peroxiredoxin, bacterio 60.7 49 0.0017 26.9 9.2 32 320-351 96-131 (161)
498 3gv1_A Disulfide interchange p 57.9 11 0.00039 31.1 4.6 39 320-363 99-137 (147)
499 2x8g_A Thioredoxin glutathione 57.3 6.3 0.00022 40.6 3.5 65 146-226 11-79 (598)
500 2vup_A Glutathione peroxidase- 54.9 27 0.00092 29.6 6.7 36 327-362 141-182 (190)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-45 Score=402.99 Aligned_cols=342 Identities=19% Similarity=0.316 Sum_probs=224.6
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhHhhhhhcCCchhhhhhhh
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEK 110 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~---~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~~ 110 (423)
....|||++|||+++|+.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||++|+.+.....
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~-- 95 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ-- 95 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-----------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC--
Confidence 44689999999999999999999999999999999985 3577899999999999999999999999987654332
Q ss_pred hhhccCcccccccCCCCCCCCCCCcceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEE
Q 014549 111 VREQYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGM 190 (423)
Q Consensus 111 ~~~~~~~~~f~~~~~~~~~~~~~~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~ 190 (423)
++++..+.|++..|++|+++ +.|++||.++|++.++++++|+|+||||||++|+++.|.|+++|+.+++.+.+++
T Consensus 96 -~~~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~i~~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~v~~~~ 170 (780)
T 3apo_A 96 -GGQYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGLLRIGA 170 (780)
T ss_dssp ---------CCSSSSSTTTTC----TTEEECCHHHHHHHHTSSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEE
T ss_pred -CCCcccccccchhhcccCCC----cceeeechHhHHhhhcCCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCceEEEE
Confidence 45677777777778888765 3489999999999999999999999999999999999999999999998899999
Q ss_pred EEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCc-eeecccc---h
Q 014549 191 VELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPR-IFYYTKE---S 266 (423)
Q Consensus 191 Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~-~~~it~~---~ 266 (423)
|||+++ ..+|++++ |+++||+++|++|.. ...|.|.++.+.|++|+.+. ++. ...+++. +
T Consensus 171 vd~~~~---~~l~~~~~------v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~---~~~~~~~i~~~~~~~ 234 (780)
T 3apo_A 171 VNCGDD---RMLCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQH---VRSTVTELSTGNFVN 234 (780)
T ss_dssp EETTTC---SSCC--------------CEEEEECTTSC----CEECCSCSCHHHHHHHHHTT---SCCCEEECCHHHHHH
T ss_pred EeCCCc---HHHHHHcC------CceeeeEEEEeCCcE----eeEecCCCCHHHHHHHHHHh---chhhheeccchhhHH
Confidence 999954 45999999 999999999999875 46899999999999999988 333 3335544 3
Q ss_pred hhhhhhhhcCCCceEEEEEecCC-CCCc-hHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCC----
Q 014549 267 MGKNFLAKTGPHKVKVIFFSKTG-ERAS-PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---- 340 (423)
Q Consensus 267 ~~~~fl~~~~~~~~~vl~f~~~~-~~~~-~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~---- 340 (423)
.+..++.. +.+.|++|.+.. +++. ..++.++..|++.+.|+.+.-.. ...+++++|+++.| +++|+++
T Consensus 235 ~l~~~~~~---~~~~vi~f~~~~~~~~~~~~~~~l~~~f~~~~~f~~v~c~~--~~~l~~~~gi~~~p-~~~f~~~~~~~ 308 (780)
T 3apo_A 235 AIETAFAA---GVGWLITFCSKGEDCLTSQTRLRLSGMLDGLVNVGWVDCDA--QDSLCKSLDTTAST-TAYFPPGATLN 308 (780)
T ss_dssp HHHHHHHH---TCEEEEEEECTTSCCCCHHHHHHHHHHTTTTEEEEEEETTT--SHHHHTCC-----C-EEEECTTCCSS
T ss_pred HHHhhhcc---CCCEEEEEecCcccccCHHHHHHHHHHhhccceEEEEEcCC--CHHHHHHhCCCCCc-eeeeccccccC
Confidence 35566644 336666655432 2333 44566888888888888885322 25799999999877 6667652
Q ss_pred --CcceeEecCCCChhHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEEccC-----ChhhHHHH
Q 014549 341 --GVKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL-----SPELNKMR 413 (423)
Q Consensus 341 --~~~~~~y~g~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~~-----~~~~~~~~ 413 (423)
+..++.|.|.++..+|..||.. .+|.+.+++..+..... .. + +++|++.... ..++.++.
T Consensus 309 ~~~~~~~~y~g~~~~~~i~~~i~~-~~p~v~~it~~~f~~~~-~~-------~----~~lv~F~~~~~~~~~~~~~~~~A 375 (780)
T 3apo_A 309 DREKSSVLFLNSLDAKEIYMEIIH-NLPDFELLSANQLEDRL-AH-------H----RWLVFFHFGKNENANDPELKKLK 375 (780)
T ss_dssp TTTGGGSEEECCCCHHHHHHHHHH-HSCCCCEECHHHHHHHH-TT-------S----EEEEEEECC-----CCGGGGGHH
T ss_pred CCcccceeccccccHHHHHHHHHH-hCCCcccCCHHHHHHHh-cc-------C----CeEEEEecCCccccchHHHHHHH
Confidence 3456788999999999999995 77888888776554321 11 1 4766665322 23566666
Q ss_pred HHHh
Q 014549 414 EVSI 417 (423)
Q Consensus 414 ~~~~ 417 (423)
+.++
T Consensus 376 ~~~~ 379 (780)
T 3apo_A 376 TLLK 379 (780)
T ss_dssp HHHG
T ss_pred Hhhc
Confidence 6664
No 2
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=300.20 Aligned_cols=197 Identities=25% Similarity=0.480 Sum_probs=171.6
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhHhhhhhcCCchhhhhhhhhhh
Q 014549 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQLHILEKVRE 113 (423)
Q Consensus 37 ~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~---~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~~~~~~ 113 (423)
.|||++|||+++|+.++||+|||++++++|||+++ .+.++|++|++||++|+||.+|+.||.+|+.+.... .++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~---~~~ 78 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN---QGG 78 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT---CSC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc---ccc
Confidence 58999999999999999999999999999999986 467889999999999999999999999998764422 134
Q ss_pred ccCcccccccCCCCCCCCCCCcceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEc
Q 014549 114 QYGEESYSRIDLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (423)
Q Consensus 114 ~~~~~~f~~~~~~~~~~~~~~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc 193 (423)
++..+.|.+..|++|+.. ..|..|+.++|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||
T Consensus 79 ~~~~~~~~~~~fg~~~~~----~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~ 154 (210)
T 3apq_A 79 QYESWSYYRYDFGIYDDD----PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNC 154 (210)
T ss_dssp CCCCHHHHHHSSSTTTTC----TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEET
T ss_pred cccccccccccccccCCC----CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEEC
Confidence 455555555567777554 3478899999999998899999999999999999999999999999988899999999
Q ss_pred ccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 194 GDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 194 ~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
+ ....+|++++ |.++||+++|++|.. ...|.|.++.+.|.+|+.+.+
T Consensus 155 ~---~~~~l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 155 G---DDRMLCRMKG------VNSYPSLFIFRSGMA----AVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp T---TCHHHHHHTT------CCSSSEEEEECTTSC----CEECCSCCCHHHHHHHHHHHH
T ss_pred C---ccHHHHHHcC------CCcCCeEEEEECCCc----eeEecCCCCHHHHHHHHHHhC
Confidence 9 4456999999 999999999988865 467899999999999999873
No 3
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=100.00 E-value=5.4e-33 Score=277.16 Aligned_cols=259 Identities=15% Similarity=0.176 Sum_probs=201.3
Q ss_pred CCCCCCCCCCCcceeeEeccCCcccccCCCCcEEEEEecCCCcccc---ccH---HHHHHHHHHhhcc-ceEEEEEcccc
Q 014549 124 DLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCG---QFS---GAWKTIAALLEGI-ANTGMVELGDI 196 (423)
Q Consensus 124 ~~~~~~~~~~~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~---~~~---p~~~~~A~~l~~~-~~~~~Vdc~~~ 196 (423)
++|.|++. +.|++||.+||+++|+++++|+|+||||||+||+ +++ |.|+++|+.+++. +.|++|||+
T Consensus 5 ~~p~~~~~----~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~-- 78 (367)
T 3us3_A 5 DFPEYDGV----DRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSE-- 78 (367)
T ss_dssp CCCCCCCC----CCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETT--
T ss_pred CCCCCCCC----CccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCc--
Confidence 35555544 4589999999999998899999999999999973 233 7999999999875 899999999
Q ss_pred hhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcC
Q 014549 197 RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTG 276 (423)
Q Consensus 197 ~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~ 276 (423)
.+..||++++ |+++||+++|++|.. ..|.|.++.+.|++|+.+.+ .|....+++.+.++.|+...
T Consensus 79 -~~~~l~~~~~------V~~~PTl~~f~~G~~-----~~y~G~~~~~~i~~~i~~~~--~~~v~~i~~~~~~~~~~~~~- 143 (367)
T 3us3_A 79 -KDAAVAKKLG------LTEEDSIYVFKEDEV-----IEYDGEFSADTLVEFLLDVL--EDPVELIEGERELQAFENIE- 143 (367)
T ss_dssp -TTHHHHHHHT------CCSTTEEEEEETTEE-----EECCSCCSHHHHHHHHHHHH--SCSEEECCSHHHHHHHHHCC-
T ss_pred -ccHHHHHHcC------CCcCceEEEEECCcE-----EEeCCCCCHHHHHHHHHHhc--CCCcEEcCCHHHHHHHhccC-
Confidence 5566999999 999999999998854 48999999999999999883 34554566555577887621
Q ss_pred CCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC-CChhH
Q 014549 277 PHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNNSR 355 (423)
Q Consensus 277 ~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~-~~~~~ 355 (423)
...++|+||.+.+....+.+..+|..+++.+.|+.+. ...++++|+++ .|+|++|++++..++.|.|. ++.+.
T Consensus 144 ~~~~vv~ff~~~~~~~~~~f~~~A~~~~~~~~F~~~~-----~~~~~~~~~v~-~p~i~lf~~~~~~~~~y~g~~~~~~~ 217 (367)
T 3us3_A 144 DEIKLIGYFKNKDSEHYKAFKEAAEEFHPYIPFFATF-----DSKVAKKLTLK-LNEIDFYEAFMEEPVTIPDKPNSEEE 217 (367)
T ss_dssp SSCEEEEECSCTTCHHHHHHHHHHHHHTTTSCEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHH
T ss_pred CCcEEEEEECCCCchHHHHHHHHHHhhcCCcEEEEEC-----CHHHHHHcCCC-CCeEEEEcCCCCCCeecCCCCCCHHH
Confidence 2346677776544334566788999998889998874 35689999998 49999999988888999995 89999
Q ss_pred HHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEEccCChhhHHHHHHHhh
Q 014549 356 LSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLSPELNKMREVSIS 418 (423)
Q Consensus 356 l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~~~~~~~~~~~~~~~ 418 (423)
|.+||+.+.+|++++++..+...+.+.. ..+ ++|++++....++.+++.+.|+.
T Consensus 218 l~~fi~~~~~p~v~elt~~~~~~~~~~~-----~~~----~~~~~f~~~~~~~~~~~~~~l~~ 271 (367)
T 3us3_A 218 IVNFVEEHRRSTLRKLKPESMYETWEDD-----MDG----IHIVAFAEEADPDGYEFLEILKS 271 (367)
T ss_dssp HHHHHHHTCSCSEEECCGGGHHHHHHSC-----BTT----EEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHcCccceeecChhhHHHHHhhc-----cCC----cEEEEEEcCCChhHHHHHHHHHH
Confidence 9999999999999999999987765322 111 46666655444445555555544
No 4
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.98 E-value=1.1e-31 Score=265.81 Aligned_cols=256 Identities=13% Similarity=0.154 Sum_probs=200.5
Q ss_pred CCCCCCCCCCCcceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHH-------HHHHHHHhhcc-ceEEEEEccc
Q 014549 124 DLPLLDATDHSVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGA-------WKTIAALLEGI-ANTGMVELGD 195 (423)
Q Consensus 124 ~~~~~~~~~~~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~-------~~~~A~~l~~~-~~~~~Vdc~~ 195 (423)
++|.|++. +.|++||.+||++.+.++++|+|+||||||+ |++++|. |+++|+.+++. +.+++|||+
T Consensus 3 ~~p~~~~~----~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~- 76 (350)
T 1sji_A 3 NFPTYDGK----DRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAK- 76 (350)
T ss_dssp SSCCCCCC----CCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETT-
T ss_pred CCCCCCCC----CccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCC-
Confidence 34555443 4589999999999998899999999999999 9999999 99999999885 899999999
Q ss_pred chhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhh-h
Q 014549 196 IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLA-K 274 (423)
Q Consensus 196 ~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~-~ 274 (423)
....+|++++ |+++||+++|++|.. ..|.|.++.++|++|+.+.+ .|....+++.+.++.|+. +
T Consensus 77 --~~~~l~~~~~------v~~~Pt~~~~~~g~~-----~~~~G~~~~~~l~~~i~~~~--~~~~~~l~~~~~~~~~~~~~ 141 (350)
T 1sji_A 77 --KEAKLAKKLG------FDEEGSLYVLKGDRT-----IEFDGEFAADVLVEFLLDLI--EDPVEIINSKLEVQAFERIE 141 (350)
T ss_dssp --TTHHHHHHHT------CCSTTEEEEEETTEE-----EEECSCCCHHHHHHHHHTTS--SCSEEECCSHHHHHHHHHCC
T ss_pred --CCHHHHHhcC------CCccceEEEEECCcE-----EEecCCCCHHHHHHHHHHhc--CCcceeccchHHHHHHhccC
Confidence 5566999999 999999999998863 48999999999999999872 344444665555677775 3
Q ss_pred cCCCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC-CCh
Q 014549 275 TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-FNN 353 (423)
Q Consensus 275 ~~~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~-~~~ 353 (423)
. ..++|+||.+.+....+.+..+|..+++.+.|+.+. .+.++++|+++ .|+|++|++.+..++.|.|. ++.
T Consensus 142 ~--~~~vv~ff~~~~~~~~~~~~~~A~~~~~~~~f~~~~-----~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~ 213 (350)
T 1sji_A 142 D--QIKLIGFFKSEESEYYKAFEEAAEHFQPYIKFFATF-----DKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTE 213 (350)
T ss_dssp S--SCEEEEECSCTTSHHHHHHHHHHHHTTTTSEEEEEC-----CHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCH
T ss_pred C--CcEEEEEECCCCcHHHHHHHHHHHhhccCcEEEEEC-----CHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCH
Confidence 3 236666776543333566778899998889998873 35699999998 99999999887888999997 899
Q ss_pred hHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEEcc-CChhhHHHHHHHhh
Q 014549 354 SRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR-LSPELNKMREVSIS 418 (423)
Q Consensus 354 ~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~-~~~~~~~~~~~~~~ 418 (423)
++|.+||+.+..|.+++++..+...+ |.. + .. ++|+|++.. ...+..++++.+++
T Consensus 214 ~~l~~fi~~~~~p~v~elt~~~~~~~-~~~-~---~~-----~~~~l~f~~~~~~~~~~~~~~~~~ 269 (350)
T 1sji_A 214 EELVEFVKEHQRPTLRRLRPEDMFET-WED-D---LN-----GIHIVAFAERSDPDGYEFLEILKQ 269 (350)
T ss_dssp HHHHHHHHHHCCCSEEECCTTTHHHH-HHS-C---SS-----SEEEEEECCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCccchhhcChhhHHHH-hcC-C---CC-----CcEEEEEEcCCCccHHHHHHHHHH
Confidence 99999999999999999999998775 322 1 11 377776653 23333455555544
No 5
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.97 E-value=2.9e-30 Score=258.68 Aligned_cols=249 Identities=12% Similarity=0.145 Sum_probs=174.6
Q ss_pred CcceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhh------ccceEEEEEcccchhhhHHHhhCC
Q 014549 134 SVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE------GIANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 134 ~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~------~~~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
..+.|++||.++|++++.++++|+|+||||||+||+++.|.|+++|+.++ +.+.+++|||+ ....+|++++
T Consensus 3 ~~~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~---~~~~l~~~~~ 79 (382)
T 2r2j_A 3 LGSEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCD---QHSDIAQRYR 79 (382)
T ss_dssp -----CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETT---TCHHHHHHTT
T ss_pred CCCceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECC---ccHHHHHhcC
Confidence 34568999999999988888999999999999999999999999999994 45899999999 4566999999
Q ss_pred CCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEec
Q 014549 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSK 287 (423)
Q Consensus 208 ~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~ 287 (423)
|+++||+++|++|... ...|.|.++.+.|++|+.+.+. |....+++.+.++. +.. ...++|+||.+
T Consensus 80 ------v~~~Pt~~~f~~G~~~---~~~~~G~~~~~~l~~~i~~~~~--~~v~~l~~~~~l~~-l~~--~~~~~v~ff~~ 145 (382)
T 2r2j_A 80 ------ISKYPTLKLFRNGMMM---KREYRGQRSVKALADYIRQQKS--DPIQEIRDLAEITT-LDR--SKRNIIGYFEQ 145 (382)
T ss_dssp ------CCEESEEEEEETTEEE---EEECCSCCSHHHHHHHHHHHHS--CCCEEC---------------CCEEEEEESC
T ss_pred ------CCcCCEEEEEeCCcEe---eeeecCcchHHHHHHHHHHhcc--CCceecCCHHHHHH-hcC--CCCEEEEEECC
Confidence 9999999999988652 2259999999999999998842 33333544332444 322 23367777764
Q ss_pred CCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCC-CcceeEecCCC-ChhHHHHHHHhhcc
Q 014549 288 TGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSF-NNSRLSEVMEQNKL 365 (423)
Q Consensus 288 ~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~-~~~~~~y~g~~-~~~~l~~fi~~~~~ 365 (423)
........+..+|..+++.+.|+.+.. ++++++++++.| +++++.+ ...+..|.|.+ +.+.|.+||+.+.+
T Consensus 146 ~~~~~~~~f~~~A~~~~~~~~F~~~~~------~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 218 (382)
T 2r2j_A 146 KDSDNYRVFERVANILHDDCAFLSAFG------DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV 218 (382)
T ss_dssp SSSHHHHHHHHHHHHHTTTCEEEEEES------CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS
T ss_pred CCChhHHHHHHHHHHhhccceEEEEeh------hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc
Confidence 322123356778888888888887752 267788998888 5555432 34568899998 89999999999999
Q ss_pred ccCcccccccccccCCCCCCccCCCCCCcceEEEEEEccCC-hhhHHHHHHHh
Q 014549 366 QELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRLS-PELNKMREVSI 417 (423)
Q Consensus 366 ~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~~~-~~~~~~~~~~~ 417 (423)
|.+++++..+...+.|.. . ++|++++.+.. ...+.+++.++
T Consensus 219 p~v~elt~~~~~~~~~~~-~----------~~~v~f~~~~~~~~~~~~~~~~~ 260 (382)
T 2r2j_A 219 PLVREITFENGEELTEEG-L----------PFLILFHMKEDTESLEIFQNEVA 260 (382)
T ss_dssp CSSEECCHHHHHHHHTTC-C----------CEEEEEECTTCCHHHHHHHHHHH
T ss_pred CceEecChhhHHHHhcCC-C----------cEEEEEecCCchHHHHHHHHHHH
Confidence 999999999998887644 1 59988886543 23344444443
No 6
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.97 E-value=1.7e-29 Score=260.17 Aligned_cols=221 Identities=16% Similarity=0.231 Sum_probs=183.2
Q ss_pred eeeEeccCCcccccCCC---CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 137 AFNVVTSEDFPSIFHDS---KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~---~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.|++||.++|++.+.++ ++|+|.||||||++|+++.|.|+++|+.+++.+.+++|||+ ....+|++++
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~v~~~~vd~~---~~~~l~~~~~------ 72 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGIVPLAKVDCT---ANTNTCNKYG------ 72 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCCEEEEETT---TCHHHHHHTT------
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCceEEEEEECC---CCHHHHHhcC------
Confidence 47999999999999766 99999999999999999999999999999999999999999 5566999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCCCCc
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~ 293 (423)
|+++||+++|++|+. +..|.|.++.+.|++|+.+.+ .|....+++.+.++.|++.. ..++|+||.+.+....
T Consensus 73 v~~~Ptl~~~~~g~~----~~~~~G~~~~~~l~~~~~~~~--~~~~~~i~~~~~~~~~~~~~--~~~vv~~~~~~~~~~~ 144 (481)
T 3f8u_A 73 VSGYPTLKIFRDGEE----AGAYDGPRTADGIVSHLKKQA--GPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAH 144 (481)
T ss_dssp CCEESEEEEEETTEE----EEECCSCSSHHHHHHHHHHHT--SCSEEEECSHHHHHHHTTSS--SCEEEEEESCTTCHHH
T ss_pred CCCCCEEEEEeCCce----eeeecCccCHHHHHHHHHhhc--ccCceecCCHHHHHHHHhcC--CcEEEEEECCCccchH
Confidence 999999999999864 468999999999999999882 34444465555567777643 2345557765444445
Q ss_pred hHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEec------CCCcceeEec-CCCChhHHHHHHHhhccc
Q 014549 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK------DPGVKPVVYY-GSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk------~~~~~~~~y~-g~~~~~~l~~fi~~~~~~ 366 (423)
..+..+|..+++.+.|+.+. +..++++|+++.. .|++|+ ..+..++.|. |.++.+.|.+||..+.+|
T Consensus 145 ~~f~~~a~~~~~~~~F~~~~-----~~~~~~~~~v~~~-~i~~~~p~~~~~~~~~~~~~y~~~~~~~~~l~~fi~~~~~p 218 (481)
T 3f8u_A 145 SEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNGE-GIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG 218 (481)
T ss_dssp HHHHHHHHHHTTTSCEEEEC-----CHHHHHHHCSSSE-EEEEECCGGGCBTTBCSEEECCCSSCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhccCceEEEEC-----CHHHHHHhCCCCC-cEEEEecccccCccCCcccccCCCCCCHHHHHHHHHHhCCC
Confidence 66777898998899998863 4568999999864 488888 4566778898 888999999999999999
Q ss_pred cCcccccccccccC
Q 014549 367 ELPQLRSVTSMELG 380 (423)
Q Consensus 367 ~lp~l~~~~~~~~~ 380 (423)
++++++..+...+.
T Consensus 219 ~v~e~t~~n~~~~~ 232 (481)
T 3f8u_A 219 ICPHMTEDNKDLIQ 232 (481)
T ss_dssp TSCEECTTTHHHHT
T ss_pred CccccChhHHHHhc
Confidence 99999999987764
No 7
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.5e-29 Score=241.82 Aligned_cols=231 Identities=16% Similarity=0.253 Sum_probs=184.2
Q ss_pred CCcceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 133 HSVHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 133 ~~~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
+..+.|++||.++|++.| +++++++|.||||||++|+++.|.|+++|+.+.+.+.|+.|||+... ...+|++++
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~-~~~l~~~~~---- 88 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNK-NKALCAKYD---- 88 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTT-THHHHHHTT----
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCcc-CHHHHHhCC----
Confidence 345568999999999998 67889999999999999999999999999999988999999998432 466999999
Q ss_pred ccccCccEEEEeCCCCCC-------------CCCcccccCCCCHHHHHHHHHHhhccCCc-eeecccchhhhhhhhhcCC
Q 014549 212 FFRRGLPSLVAFPPGCKS-------------SDCMTRFEGELSVDAVTDWFATAILKLPR-IFYYTKESMGKNFLAKTGP 277 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~-------------~~~~~~y~G~~~~~~l~~fi~~~~~~~p~-~~~it~~~~~~~fl~~~~~ 277 (423)
|.++||+++|.+|+.. ...+..|.|.++.+.|++|+.+. ++. ...+++.+.++.|+...
T Consensus 89 --I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~---~~~~v~~i~~~~~l~~~l~~~-- 161 (298)
T 3ed3_A 89 --VNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR---IRSYVKKFVRIDTLGSLLRKS-- 161 (298)
T ss_dssp --CCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTT---CCCCEEECSCGGGHHHHHTSC--
T ss_pred --CCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHh---cccccEEcCCHHHHHHHHhcC--
Confidence 9999999999998610 01246899999999999999988 433 33355544477888653
Q ss_pred CceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHH--hhcC-----C-------------CCCCeEEEe
Q 014549 278 HKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWW--NTFE-----V-------------ESAPAIVFL 337 (423)
Q Consensus 278 ~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~--~~f~-----v-------------~~~Ptl~lf 337 (423)
+.+.|++|++.. ...+.++.+|..|++.+.|+.+...+.. .+. ++|+ | ...|+|++|
T Consensus 162 ~~~~vi~fs~~~-~~~~~f~~~A~~~~~~~~F~~v~~~~~a--~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~ 238 (298)
T 3ed3_A 162 PKLSVVLFSKQD-KISPVYKSIALDWLGKFDFYSISNKKLK--QLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVF 238 (298)
T ss_dssp SSEEEEEEESSS-SCCHHHHHHHHHTBTTEEEEEEEGGGCC--CCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEE
T ss_pred CceEEEEEcCCC-cchHHHHHHHHHhhcCcEEEEEcchHhh--hhhhhhhhcccCcchhhhhhcccccccccCCCeEEEE
Confidence 458888887543 4578899999999999999998743221 111 2333 2 568999999
Q ss_pred cCCCcceeEecC-CCChhHHHHHHH--hhccccCcccccccccc
Q 014549 338 KDPGVKPVVYYG-SFNNSRLSEVME--QNKLQELPQLRSVTSME 378 (423)
Q Consensus 338 k~~~~~~~~y~g-~~~~~~l~~fi~--~~~~~~lp~l~~~~~~~ 378 (423)
+..+.+++.|.| .++.++|.+||. .+..|..++++..+.+.
T Consensus 239 ~~~~~~~~~y~g~~~~~~~i~~fi~~~~~~~p~~~~ls~~~~~~ 282 (298)
T 3ed3_A 239 DADKDKFWEYEGNSINKNDISKFLRDTFSITPNEGPFSRRSEYI 282 (298)
T ss_dssp ETTTTEEEECCCSSCCHHHHHHHHHHHHTCCCSSSTTSHHHHHH
T ss_pred cCCCCceEEeccccCCHHHHHHHHHhhcCCCCCcCCCchHHHHH
Confidence 998899999995 689999999999 78899999999877554
No 8
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.95 E-value=4.3e-28 Score=251.32 Aligned_cols=218 Identities=13% Similarity=0.152 Sum_probs=178.9
Q ss_pred cceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.+.|++||.++|++.+.++++|+|+||||||+||+++.|.|+++|+.+++. +.|++|||+ ....+|++++
T Consensus 13 ~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~---~~~~l~~~~~------ 83 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCT---ENQDLCMEHN------ 83 (504)
T ss_dssp TSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETT---TCHHHHHHTT------
T ss_pred CCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECC---CCHHHHHhcC------
Confidence 345899999999999999999999999999999999999999999999986 999999999 4566999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCCCCc
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERAS 293 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~ 293 (423)
|+++||+++|++|... ....|.|.++.+.|++|+.+.+ .|....+++ ++.|+.......++|++|.+......
T Consensus 84 v~~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~l~~~~--~~~v~~i~~---~~~~~~~~~~~~~~v~~f~~~~~~~~ 156 (504)
T 2b5e_A 84 IPGFPSLKIFKNSDVN--NSIDYEGPRTAEAIVQFMIKQS--QPAVAVVAD---LPAYLANETFVTPVIVQSGKIDADFN 156 (504)
T ss_dssp CCSSSEEEEEETTCTT--CEEECCSCCSHHHHHHHHHHHT--SCSEEECSC---HHHHHHHSCCSSCEEEEEESCCHHHH
T ss_pred CCcCCEEEEEeCCccc--cceeecCCCCHHHHHHHHHHhc--CCcceeHHH---HHHHHhcCCCceEEEEEeCCCCchHH
Confidence 9999999999998631 1458999999999999999983 233333555 67777653222577888875333345
Q ss_pred hHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC-C---ChhHHHHHHHhhccccCc
Q 014549 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-F---NNSRLSEVMEQNKLQELP 369 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~-~---~~~~l~~fi~~~~~~~lp 369 (423)
..+..+|..+++.+.|+.+. +++++++++ +++|++.+ .++.|.|. + +.+.|.+||..+.+|.++
T Consensus 157 ~~f~~~A~~~~~~~~F~~~~-------~~~~~~~~~----i~l~~~~~-~~~~~~g~~~~~~~~~~l~~fi~~~~~p~v~ 224 (504)
T 2b5e_A 157 ATFYSMANKHFNDYDFVSAE-------NADDDFKLS----IYLPSAMD-EPVVYNGKKADIADADVFEKWLQVEALPYFG 224 (504)
T ss_dssp HHHHHHHHHTTTTCEEEEEE-------CTTSCCEEE----EEETTEEE-EEEECCSCHHHHTSHHHHHHHHHHHSSCSSC
T ss_pred HHHHHHHHHhhcCcEEEEEH-------HHHHhcCCe----EEecCCCC-cccccCCcccccCCHHHHHHHHHhcccCCcc
Confidence 66788999998999998875 266777764 88888755 78889998 6 889999999999999999
Q ss_pred ccccccccccC
Q 014549 370 QLRSVTSMELG 380 (423)
Q Consensus 370 ~l~~~~~~~~~ 380 (423)
+++..+...+.
T Consensus 225 ~~t~~~~~~~~ 235 (504)
T 2b5e_A 225 EIDGSVFAQYV 235 (504)
T ss_dssp BCCHHHHHHHH
T ss_pred cCCHhHHHHHh
Confidence 99999877663
No 9
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.94 E-value=1.2e-25 Score=209.59 Aligned_cols=209 Identities=17% Similarity=0.257 Sum_probs=163.9
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~---~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.|++|+.++|++.+.++++++|.|||+||++|+.+.|.|+++++.+++. +.++.|||+ ....+|++|+
T Consensus 15 ~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~---~~~~l~~~~~----- 86 (241)
T 3idv_A 15 NGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDAT---SASVLASRFD----- 86 (241)
T ss_dssp TTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETT---TCHHHHHHTT-----
T ss_pred CCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEecc---CCHHHHHhcC-----
Confidence 45899999999999988999999999999999999999999999999876 899999999 4556999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccC----Cceee-cccchhhhhhhhhcCCCceEEEEEec
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKL----PRIFY-YTKESMGKNFLAKTGPHKVKVIFFSK 287 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~----p~~~~-it~~~~~~~fl~~~~~~~~~vl~f~~ 287 (423)
|+++||+++|.+|+. ..|.|.++.+.|.+|+.+..... +.... ++..+ ++.++.... .++|.|+++
T Consensus 87 -v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~v~f~a~ 157 (241)
T 3idv_A 87 -VSGYPTIKILKKGQA-----VDYEGSRTQEEIVAKVREVSQPDWTPPPEVTLVLTKEN-FDEVVNDAD--IILVEFYAP 157 (241)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCSCHHHHHHHHHHHHSTTCCCCCCSSEECCTTT-HHHHHHHCS--EEEEEEECT
T ss_pred -CCcCCEEEEEcCCCc-----ccccCcccHHHHHHHHhhccCcccccccccceeccHHH-HHHhhccCC--eEEEEEECC
Confidence 999999999988865 37999999999999998874321 11222 44444 556664432 234445553
Q ss_pred C---CCCCchHHHHHHHhcccc---ceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHH
Q 014549 288 T---GERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVME 361 (423)
Q Consensus 288 ~---~~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~ 361 (423)
. +....|.+..++..+... +.|+.+.... ..+++++|+|.++||+++|+++ +++.|.|.++.+.|.+||.
T Consensus 158 wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g--~~~~~~g~~~~~~l~~~l~ 233 (241)
T 3idv_A 158 WCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA--ETDLAKRFDVSGYPTLKIFRKG--RPYDYNGPREKYGIVDYMI 233 (241)
T ss_dssp TCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSSEEEEEETT--EEEECCSCCSHHHHHHHHH
T ss_pred CCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC--CHHHHHHcCCcccCEEEEEECC--eEEEecCCCCHHHHHHHHH
Confidence 2 233457778888877554 7777775432 4689999999999999999864 4566899999999999999
Q ss_pred hhcc
Q 014549 362 QNKL 365 (423)
Q Consensus 362 ~~~~ 365 (423)
++.-
T Consensus 234 ~~~~ 237 (241)
T 3idv_A 234 EQSG 237 (241)
T ss_dssp HHTT
T ss_pred hhhC
Confidence 8644
No 10
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.90 E-value=6.5e-23 Score=223.20 Aligned_cols=225 Identities=16% Similarity=0.198 Sum_probs=180.7
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
..|.+||.++|++. .+++++|.|||+||++|+.+.|.|+++|+.+++.+.|+.|||+ ....+|++|+ |+
T Consensus 440 ~~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~---~~~~~~~~~~------v~ 508 (780)
T 3apo_A 440 SHVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCT---IHEGLCNMYN------IQ 508 (780)
T ss_dssp SCEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHTT------CC
T ss_pred CCCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCC---CCHHHHHHcC------CC
Confidence 34899999999987 7889999999999999999999999999999988999999999 4456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcC-CCceEEEEEecCC---CC
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTG-PHKVKVIFFSKTG---ER 291 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~-~~~~~vl~f~~~~---~~ 291 (423)
++||+++|.+|.. ..|.|.++.++|.+|+.+.+. |....++.++ ++.++.... +..++|.|+.+.+ +.
T Consensus 509 ~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~fi~~~~~--~~v~~l~~~~-f~~~v~~~~~~~~~lv~F~ap~C~~c~~ 580 (780)
T 3apo_A 509 AYPTTVVFNQSSI-----HEYEGHHSAEQILEFIEDLRN--PSVVSLTPST-FNELVKQRKHDEVWMVDFYSPWSHPSQV 580 (780)
T ss_dssp SSSEEEEEETTEE-----EEECSCSCHHHHHHHHHHHHS--CSEEECCHHH-HHHHTTTCCTTCCEEEEEECTTCHHHHH
T ss_pred cCCeEEEEcCCce-----eeecCcccHHHHHHHHHhhcc--cceeecCccc-HHHHhhccCCCCeEEEEEECCCCHHHHH
Confidence 9999999977643 478899999999999998843 4454466544 566665432 2335777776532 23
Q ss_pred CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCc---ceeEecC-CCChhHHHHHHHhhcccc
Q 014549 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYG-SFNNSRLSEVMEQNKLQE 367 (423)
Q Consensus 292 ~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~---~~~~y~g-~~~~~~l~~fi~~~~~~~ 367 (423)
..|.+..+|..+++.+.|+.+... ....++++|+|+++|+|++|+.+.. .+..|.| .++.+.|.+||..+..+.
T Consensus 581 ~~p~~~~lA~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~~~ 658 (780)
T 3apo_A 581 LMPEWKRMARTLTGLINVGSVDCG--QYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGFLPQA 658 (780)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEETT--TTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTTSCCC
T ss_pred hhHHHHHHHHHhhCCeEEEEEECc--chHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhhcccc
Confidence 457788899999888888887532 2367899999999999999987654 4678899 899999999999988777
Q ss_pred CcccccccccccCC
Q 014549 368 LPQLRSVTSMELGC 381 (423)
Q Consensus 368 lp~l~~~~~~~~~c 381 (423)
+.+++..+.....+
T Consensus 659 v~~l~~~~~~~~~~ 672 (780)
T 3apo_A 659 SIDLTPQTFNEKVL 672 (780)
T ss_dssp SEEECHHHHHHHTT
T ss_pred cccCCHHHHHHHHh
Confidence 88888877766554
No 11
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.90 E-value=1.6e-22 Score=189.79 Aligned_cols=210 Identities=12% Similarity=0.174 Sum_probs=151.0
Q ss_pred ceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhc---cceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~---~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
+.|.+||.++|++.+ +++++|+|+|||+||++|+++.|.|+++++.+.+ .+.|++|||+.+ ....+|++++
T Consensus 12 ~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~-~~~~l~~~~~---- 86 (244)
T 3q6o_A 12 DPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEE-TNSAVCRDFN---- 86 (244)
T ss_dssp SSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTST-TTHHHHHHTT----
T ss_pred CCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCch-hhHHHHHHcC----
Confidence 347999999999877 6679999999999999999999999999999988 689999999533 3567999999
Q ss_pred ccccCccEEEEeCCCCCCC-CCcccccCCCCHHHHHHHHHHhhccCC----ce----eecccchhhhhhhhhcCCCceEE
Q 014549 212 FFRRGLPSLVAFPPGCKSS-DCMTRFEGELSVDAVTDWFATAILKLP----RI----FYYTKESMGKNFLAKTGPHKVKV 282 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~-~~~~~y~G~~~~~~l~~fi~~~~~~~p----~~----~~it~~~~~~~fl~~~~~~~~~v 282 (423)
|.++||+++|.+|.... .....+.| ++.+.|.+|+.+.+.... .. ..++..+ +..|+... ...+++
T Consensus 87 --v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~~~p~~~p~l~~~~~~~-l~~~~~~~-~~~~~a 161 (244)
T 3q6o_A 87 --IPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHDTWPPACPPLEPAXLEE-IDGFFARN-NEEYLA 161 (244)
T ss_dssp --CCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTTSCCTTSCCCSCCCHHH-HHTHHHHC-CCSEEE
T ss_pred --CCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccccCCCCCCCcccccHHH-HHHHhhcC-CCceEE
Confidence 99999999999875520 11224556 799999999988743221 11 1233333 56676553 345777
Q ss_pred EEEecCCCCCchHHHHHHHhcccc--ceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEec-CCCChhHHHHH
Q 014549 283 IFFSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYY-GSFNNSRLSEV 359 (423)
Q Consensus 283 l~f~~~~~~~~~~~~~~a~~~~~~--~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~-g~~~~~~l~~f 359 (423)
++|.+.. ....+.++..+... +.+..+. .+...++++|||+++|++++|..++ +...++ ..-+.+.+..+
T Consensus 162 l~f~~~~---~~~~~~~~~d~~~~~~i~v~~~~---~~~~~l~~~f~v~~~Pslvl~~~~g-~~~~~~~~~~~r~~~~~~ 234 (244)
T 3q6o_A 162 LIFEXGG---SYLAREVALDLSQHKGVAVRRVL---NTEANVVRKFGVTDFPSCYLLFRNG-SVSRVPVLMESRSFYTAY 234 (244)
T ss_dssp EEEECTT---CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCSSEEEEEETTS-CEEECCCSSSSHHHHHHH
T ss_pred EEEEECC---cchHHHHHHHhccCCceEEEEEe---CchHHHHHHcCCCCCCeEEEEeCCC-CeEeeccccccHHHHHHH
Confidence 7777532 45566666666633 4444432 2236799999999999999998654 344444 33456677777
Q ss_pred HHh
Q 014549 360 MEQ 362 (423)
Q Consensus 360 i~~ 362 (423)
++.
T Consensus 235 l~~ 237 (244)
T 3q6o_A 235 LQR 237 (244)
T ss_dssp HHT
T ss_pred HHh
Confidence 766
No 12
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.86 E-value=1.3e-20 Score=195.16 Aligned_cols=210 Identities=14% Similarity=0.175 Sum_probs=151.3
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhc---cceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~---~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
.|.+|+.++|++.+ +++++++|.|||+||++|+++.|.|+++++.+++ .+.|++|||+++ ...++|++|+
T Consensus 13 ~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d-~~~~l~~~~~----- 86 (519)
T 3t58_A 13 PLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEE-TNSAVCREFN----- 86 (519)
T ss_dssp SSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSG-GGHHHHHHTT-----
T ss_pred CcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCcc-ccHHHHHHcC-----
Confidence 47999999999876 7779999999999999999999999999999988 689999999743 3567999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCC----c----eeecccchhhhhhhhhcCCCceEEEE
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP----R----IFYYTKESMGKNFLAKTGPHKVKVIF 284 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p----~----~~~it~~~~~~~fl~~~~~~~~~vl~ 284 (423)
|.++||+++|.+|...-.....+.|.++.+.|.+++.+.+.... . ...++..+ ++.|+... +..+++++
T Consensus 87 -V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~~P~~~p~l~~it~~~-l~~~l~~~-~~~~vall 163 (519)
T 3t58_A 87 -IAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDTWPPACPPLEPAKLND-IDGFFTRN-KADYLALV 163 (519)
T ss_dssp -CCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSCCCTTCCCCSBCCHHH-HTTGGGSC-CCSEEEEE
T ss_pred -CcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhccccCCCCCCccCcCCHHH-HHHHhccC-CCCeEEEE
Confidence 99999999999765411113456688999999999988743211 1 11233333 56666553 45577788
Q ss_pred EecCCCCCchHHHHHHHhcccc--ceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCC-ChhHHHHHHH
Q 014549 285 FSKTGERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVME 361 (423)
Q Consensus 285 f~~~~~~~~~~~~~~a~~~~~~--~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~-~~~~l~~fi~ 361 (423)
|++.. +...+.++..+... +.+..+. .++..++++|||+++|++++|..++... .+.... ..+.+..++.
T Consensus 164 F~~~~---s~~~~~~~ldl~~~~~v~v~~v~---~~~~~l~~kfgV~~~Pslvl~~~nGk~~-~~~v~~~~r~~~~~~l~ 236 (519)
T 3t58_A 164 FERED---SYLGREVTLDLSQYHAVAVRRVL---NTESDLVNKFGVTDFPSCYLLLRNGSVS-RVPVLVESRSFYTSYLR 236 (519)
T ss_dssp EECTT---CCHHHHHHHHTTTCTTEEEEEEE---TTCHHHHHHHTCCCSSEEEEEETTSCEE-ECCCSSCSHHHHHHHHT
T ss_pred ecCCc---hHHHHHHHHHhhccCCeeEEEec---CchHHHHHHcCCCCCCeEEEEeCCCcee-ecccccccHHHHHHHHH
Confidence 87542 45667777776644 4444442 2246799999999999999998765432 222222 3345566665
Q ss_pred h
Q 014549 362 Q 362 (423)
Q Consensus 362 ~ 362 (423)
.
T Consensus 237 ~ 237 (519)
T 3t58_A 237 G 237 (519)
T ss_dssp T
T ss_pred H
Confidence 4
No 13
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.83 E-value=1.3e-20 Score=158.61 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=93.8
Q ss_pred cceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhh-----ccceEEEEEcccchhhhHHHhhCCC
Q 014549 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHLAERKPI 208 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~-----~~~~~~~Vdc~~~~~~~~l~~~~~~ 208 (423)
.+.|.+|+.++|++.+ +++++++|.||||||++|+++.|.|+++|+.+. +.+.++.|||+ ...++|++++
T Consensus 14 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~---~~~~l~~~~~- 89 (127)
T 3h79_A 14 PSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE---KYPDVIERMR- 89 (127)
T ss_dssp CCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT---TCHHHHHHTT-
T ss_pred CCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc---ccHhHHHhcC-
Confidence 3458999999999988 568999999999999999999999999999874 45899999999 4556999999
Q ss_pred CccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 209 GQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+.. .+..|.|.++.+.|.+|+.+.
T Consensus 90 -----v~~~Pt~~~~~~g~~~--~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 90 -----VSGFPTMRYYTRIDKQ--EPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp -----CCSSSEEEEECSSCSS--SCEECCSCCCHHHHHHHHHHH
T ss_pred -----CccCCEEEEEeCCCCC--CceEecCCccHHHHHHHHHhc
Confidence 9999999999998652 135899999999999999764
No 14
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.83 E-value=7.2e-20 Score=169.10 Aligned_cols=195 Identities=14% Similarity=0.120 Sum_probs=139.5
Q ss_pred CCCcEEEEEecC-CCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCC
Q 014549 152 DSKPWLIQVYSD-GSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (423)
Q Consensus 152 ~~~~~lV~FYap-wC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~ 230 (423)
.+.+++|.||+| ||++|+.+.|.|+++|+. .+.+.++.|||++. ...++|++|+ |+++||+++|.+|...
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~~v~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~~~~~g~~~- 91 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TDKLSYEIVDFDTP-EGKELAKRYR------IDRAPATTITQDGKDF- 91 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CTTEEEEEEETTSH-HHHHHHHHTT------CCSSSEEEEEETTBCC-
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CCceEEEEEeCCCc-ccHHHHHHcC------CCcCceEEEEcCCcee-
Confidence 356778999999 999999999999999964 56789999999941 1567999999 9999999999888542
Q ss_pred CCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCce-EEEEEecCC-CC--CchHHHHHHHhcc--
Q 014549 231 DCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKV-KVIFFSKTG-ER--ASPFVRQISRNYW-- 304 (423)
Q Consensus 231 ~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~-~vl~f~~~~-~~--~~~~~~~~a~~~~-- 304 (423)
...|.|.++.+.+.+|+............++.+. ++..... ...+ +|.|+++.+ .| ..|.+..++..+.
T Consensus 92 --~~~~~G~~~~~~l~~~l~~~l~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~ 166 (226)
T 1a8l_A 92 --GVRYFGLPAGHEFAAFLEDIVDVSREETNLMDET-KQAIRNI--DQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA 166 (226)
T ss_dssp --SEEEESCCCTTHHHHHHHHHHHHHHTCCCCCHHH-HHHHTTC--CSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT
T ss_pred --eEEEeccCcHHHHHHHHHHHHhhcCCCCCCCHHH-HHHHHhc--CCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc
Confidence 3589999999999999977521111111133222 2333221 2234 555666532 22 3466777787775
Q ss_pred --ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 305 --AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 305 --~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+.+.++.+... +...++++|+|.++||+++|+++ .....|.|..+.+.|.+||++.
T Consensus 167 ~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 167 GKGKILGDMVEAI--EYPEWADQYNVMAVPKIVIQVNG-EDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp TCCCEEEEEEEGG--GCHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred cCCcEEEEEEEcc--cCHHHHHhCCCcccCeEEEEeCC-ceeEEEcCCCCHHHHHHHHHHh
Confidence 35666666533 23779999999999999999854 3445678999999999999874
No 15
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.83 E-value=9.4e-20 Score=168.89 Aligned_cols=195 Identities=10% Similarity=0.030 Sum_probs=139.0
Q ss_pred ccccc--CCCCcEEEEEe-----cCCCccccccHHHHHHHHHHh--hccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 146 FPSIF--HDSKPWLIQVY-----SDGSYLCGQFSGAWKTIAALL--EGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 146 f~~~v--~~~~~~lV~FY-----apwC~~C~~~~p~~~~~A~~l--~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
+.+++ +...+++|.|| +|||+||+++.|+|+++|+.+ .+.+.+++|||+ .+.++|++|+ |++
T Consensus 11 l~~~~~~~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~---~~~~l~~~~~------v~~ 81 (229)
T 2ywm_A 11 LKELAQKEFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF---THKEETEKYG------VDR 81 (229)
T ss_dssp HHHHHHHHCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT---TCHHHHHHTT------CCB
T ss_pred HHHHHHHhccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc---ccHHHHHHcC------CCc
Confidence 44445 34566776666 899999999999999999998 667999999999 5566999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCce-EEEEEecCC-CC--C
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKV-KVIFFSKTG-ER--A 292 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~-~vl~f~~~~-~~--~ 292 (423)
+||+++|.+|.. ...|.|.++.+.+.+|+.+.+........++... ++..... ...+ ++.|+++.+ .| .
T Consensus 82 ~Ptl~~~~~~~~----~~~~~G~~~~~~l~~~~~~~~~~~~~~~~l~~~~-~~~~~~~--~~~~~~v~F~a~wC~~C~~~ 154 (229)
T 2ywm_A 82 VPTIVIEGDKDY----GIRYIGLPAGLEFTTLINGIFHVSQRKPQLSEKT-LELLQVV--DIPIEIWVFVTTSCGYCPSA 154 (229)
T ss_dssp SSEEEEESSSCC----CEEEESCCCTTHHHHHHHHHHHHHTTCCSCCHHH-HHHHTTC--CSCEEEEEEECTTCTTHHHH
T ss_pred CcEEEEECCCcc----cceecCCccHHHHHHHHHHHHhccCCccCCCHHH-HHHHHhc--CCCeEEEEEECCCCcchHHH
Confidence 999999986543 5689999999999999987632111122234333 3433321 2234 344666432 22 3
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+ +.+.++.+.... .++++++|+|.++|++++ ++ . ...|.|..+.+.|.+||++.
T Consensus 155 ~~~~~~~~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~--~G-~-~~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 155 AVMAWDFALAN-DYITSKVIDASE--NQDLAEQFQVVGVPKIVI--NK-G-VAEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp HHHHHHHHHHC-TTEEEEEEEGGG--CHHHHHHTTCCSSSEEEE--GG-G-TEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEEEECCC--CHHHHHHcCCcccCEEEE--CC-E-EEEeeCCCCHHHHHHHHHHH
Confidence 46667777776 466676665332 377999999999999998 33 2 44588999999999999874
No 16
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.82 E-value=8.8e-20 Score=180.68 Aligned_cols=211 Identities=15% Similarity=0.167 Sum_probs=155.5
Q ss_pred eeeEeccCCcccccCC-CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~-~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|.++|.++|...+.+ ..+++|.||++||++|+++.|.|+++|+.+++.+.|+.|||++. ....+|+.+| |+
T Consensus 118 ~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~-~~~~~~~~fg------i~ 190 (361)
T 3uem_A 118 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHT-DNQRILEFFG------LK 190 (361)
T ss_dssp SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSG-GGHHHHHHTT------CC
T ss_pred cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChH-HHHHHHHHcC------CC
Confidence 4789999999988844 56789999999999999999999999999999999999999832 2456999999 77
Q ss_pred C--ccEEEEeCCCCCCCCCccccc---CCCCHHHHHHHHHHhhcc----------CCc------eeecccchhhhhhhhh
Q 014549 216 G--LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWFATAILK----------LPR------IFYYTKESMGKNFLAK 274 (423)
Q Consensus 216 ~--~Pti~~f~~g~~~~~~~~~y~---G~~~~~~l~~fi~~~~~~----------~p~------~~~it~~~~~~~fl~~ 274 (423)
+ +|++++|..+.. ...|. |.++.+.|.+|+.+.+.. +|. ...++..+ ++.++..
T Consensus 191 ~~~~P~~~~~~~~~~----~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~-f~~~~~~ 265 (361)
T 3uem_A 191 KEECPAVRLITLEEE----MTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKN-FEDVAFD 265 (361)
T ss_dssp TTTCSEEEEEECC------CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTT-HHHHHTC
T ss_pred ccCCccEEEEEcCCc----ccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCc-hhhhccc
Confidence 7 999999998643 34665 799999999999886321 111 11134444 3443321
Q ss_pred cCCCceEEEEEecCC---CCCchHHHHHHHhcccc--ceEEEEEccccccHHHHhhcCCCCCCeEEEecCC-CcceeEec
Q 014549 275 TGPHKVKVIFFSKTG---ERASPFVRQISRNYWAY--ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYY 348 (423)
Q Consensus 275 ~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~~--~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~-~~~~~~y~ 348 (423)
....++|.|+++.| ....|.+..++..|.+. +.++.+. ++.. .+++|+|.++||+++|+.+ +..+..|.
T Consensus 266 -~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd---~~~~-~~~~~~v~~~Pt~~~~~~~~~~~~~~~~ 340 (361)
T 3uem_A 266 -EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMD---STAN-EVEAVKVHSFPTLKFFPASADRTVIDYN 340 (361)
T ss_dssp -TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEE---TTTC-BCSSCCCCSSSEEEEECSSSSCCCEECC
T ss_pred -CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEE---CCcc-chhhcCCcccCeEEEEECCCCcceeEec
Confidence 12224555666532 22457788888888765 5555554 3222 2789999999999999766 45678899
Q ss_pred CCCChhHHHHHHHhhc
Q 014549 349 GSFNNSRLSEVMEQNK 364 (423)
Q Consensus 349 g~~~~~~l~~fi~~~~ 364 (423)
|.++.+.|.+||+++.
T Consensus 341 G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 341 GERTLDGFKKFLESGG 356 (361)
T ss_dssp SCSSHHHHHHHHTTTS
T ss_pred CCCCHHHHHHHHHhcC
Confidence 9999999999999864
No 17
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.79 E-value=9.9e-20 Score=138.50 Aligned_cols=67 Identities=33% Similarity=0.541 Sum_probs=62.9
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhhcCCc
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 102 (423)
..|||++|||+++++.++||+|||++++++|||+++++.++|++|++||++|+||.+|..||.+|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 4699999999999999999999999999999999988889999999999999999999999999863
No 18
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=1.2e-18 Score=146.66 Aligned_cols=107 Identities=19% Similarity=0.354 Sum_probs=95.1
Q ss_pred ceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
+.|.+|+.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+ ....+|++++ |
T Consensus 17 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~---~~~~l~~~~~------v 87 (130)
T 2dml_A 17 DDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNAD---KHQSLGGQYG------V 87 (130)
T ss_dssp SSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETT---TCHHHHHHHT------C
T ss_pred CCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCC---CCHHHHHHcC------C
Confidence 457999999999855 77899999999999999999999999999999988999999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhc
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~ 254 (423)
.++||+++|.+|+.. ...|.|.++.+.|.+|+.+.+.
T Consensus 88 ~~~Pt~~~~~~~~~~---~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 88 QGFPTIKIFGANKNK---PEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp CSSSEEEEESSCTTS---CEECCSCCSHHHHHHHHHHHHH
T ss_pred CccCEEEEEeCCCCe---EEEeecCCCHHHHHHHHHHHHh
Confidence 999999999988652 4578999999999999988743
No 19
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.77 E-value=2.9e-19 Score=137.36 Aligned_cols=69 Identities=26% Similarity=0.475 Sum_probs=64.4
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
..|||++|||+++++.++||+|||++++++|||+++ ++.+.|+.|++||++|+||.+|..||.+|..+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 469999999999999999999999999999999986 578899999999999999999999999987653
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.77 E-value=2.5e-19 Score=146.25 Aligned_cols=99 Identities=15% Similarity=0.240 Sum_probs=84.4
Q ss_pred eEec-cCCccccc--CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 139 NVVT-SEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 139 ~~L~-~~nf~~~v--~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.+++ .++|++.| .++++++|.||||||++|+.+.|.|+++++.+.+ +.+++|||+ ..+++|++|+ |+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~-~~~~~vd~d---~~~~l~~~~~------V~ 72 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD-VVFLKVDVD---ECEDIAQDNQ------IA 72 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEETT---TCHHHHHHTT------CC
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-eEEEEEecc---cCHHHHHHcC------CC
Confidence 4454 46899888 4578999999999999999999999999998764 689999999 4556999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|++|+. ...+.| .+.++|.+|+.++
T Consensus 73 ~~PT~~~~~~G~~----v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 73 CMPTFLFMKNGQK----LDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp BSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred eecEEEEEECCEE----EEEEeC-cCHHHHHHHHHhc
Confidence 9999999999876 456778 5899999999875
No 21
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=2.9e-19 Score=137.70 Aligned_cols=71 Identities=27% Similarity=0.481 Sum_probs=65.4
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
+...|||++|||+++++.++||+|||++++++|||+++ ++.++|+.|++||++|+||.+|..||.+|..+.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 44679999999999999999999999999999999986 467889999999999999999999999987653
No 22
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=4.6e-19 Score=136.96 Aligned_cols=70 Identities=26% Similarity=0.512 Sum_probs=64.7
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~---~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
....|||++|||+++++.++||+|||++++++|||+++ .+.++|+.|++||++|+||.+|..||.+|..+
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 44679999999999999999999999999999999986 35788999999999999999999999998765
No 23
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=6.2e-19 Score=137.24 Aligned_cols=71 Identities=30% Similarity=0.476 Sum_probs=65.1
Q ss_pred CCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 33 ~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~----~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
++...|||++|||+++++.++||+|||+++++||||++++ +.++|++|++||++|+||.+|..||.+|+.+
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 79 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGP 79 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCS
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 4556899999999999999999999999999999999874 3568999999999999999999999999765
No 24
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.76 E-value=3e-19 Score=142.02 Aligned_cols=69 Identities=30% Similarity=0.590 Sum_probs=65.5
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
..|||+||||+++++.++||+|||+|++++|||++++..++|++|++||++|+||.+|..||.+|..+.
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 75 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAA 75 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHh
Confidence 569999999999999999999999999999999998888999999999999999999999999987653
No 25
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=8.5e-19 Score=138.25 Aligned_cols=70 Identities=29% Similarity=0.573 Sum_probs=65.2
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
....|||++|||+++++.++||+|||++++++|||+++ .+.++|++|++||++|+||.+|..||.+|..+
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 34779999999999999999999999999999999986 57889999999999999999999999998765
No 26
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.75 E-value=1.1e-18 Score=142.41 Aligned_cols=103 Identities=16% Similarity=0.287 Sum_probs=94.0
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|.+||.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....+|++++ |.
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~---~~~~l~~~~~------v~ 75 (111)
T 3gnj_A 5 SLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVE---EEKTLFQRFS------LK 75 (111)
T ss_dssp CSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETT---TCHHHHHHTT------CC
T ss_pred cceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECC---cChhHHHhcC------CC
Confidence 47899999999998 88999999999999999999999999999999988999999999 4556999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|+. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 76 GVPQILYFKDGEY----KGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp SSCEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred cCCEEEEEECCEE----EEEEeccCCHHHHHHHHHHH
Confidence 9999999988865 45788999999999999876
No 27
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.75 E-value=3.2e-18 Score=152.12 Aligned_cols=107 Identities=15% Similarity=0.306 Sum_probs=91.5
Q ss_pred eeeEeccCCcccccCC--CCcEEEEEec-------CCCccccccHHHHHHHHHHhh-----ccceEEEEEcccchhhhHH
Q 014549 137 AFNVVTSEDFPSIFHD--SKPWLIQVYS-------DGSYLCGQFSGAWKTIAALLE-----GIANTGMVELGDIRLATHL 202 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~--~~~~lV~FYa-------pwC~~C~~~~p~~~~~A~~l~-----~~~~~~~Vdc~~~~~~~~l 202 (423)
.|++||++||+++|.+ +.+++|.||| +||++|+.++|+|+++|+++. +.+.|++||+++ .+++
T Consensus 19 ~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~---~~~l 95 (178)
T 3ga4_A 19 GVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE---VPQL 95 (178)
T ss_dssp SEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT---CHHH
T ss_pred CCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc---CHHH
Confidence 4899999999998843 5679999999 499999999999999999998 789999999994 5569
Q ss_pred HhhCCCCccccccCccEEEEeCCCCCCC--------CCcccc---cC-CCCHHHHHHHHHHh
Q 014549 203 AERKPIGQIFFRRGLPSLVAFPPGCKSS--------DCMTRF---EG-ELSVDAVTDWFATA 252 (423)
Q Consensus 203 ~~~~~~~~~~~i~~~Pti~~f~~g~~~~--------~~~~~y---~G-~~~~~~l~~fi~~~ 252 (423)
+++|+ |+++|||++|++|.... .....| .| .++++.|.+|+.+.
T Consensus 96 a~~~~------I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~ 151 (178)
T 3ga4_A 96 VKDLK------LQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKI 151 (178)
T ss_dssp HHHTT------CCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHH
T ss_pred HHHcC------CCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHh
Confidence 99999 99999999999997521 012345 35 89999999999987
No 28
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.75 E-value=1.1e-18 Score=142.12 Aligned_cols=105 Identities=15% Similarity=0.272 Sum_probs=91.8
Q ss_pred CcceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhh---ccceEEEEEcccchhhhHHHhhCCCCc
Q 014549 134 SVHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRLATHLAERKPIGQ 210 (423)
Q Consensus 134 ~~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~---~~~~~~~Vdc~~~~~~~~l~~~~~~~~ 210 (423)
..+.|.+||.++|++.+. +++++|.||++||++|+.+.|.|+++++.+. +.+.++.|||+ ....+|++++
T Consensus 3 ~~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~---~~~~l~~~~~--- 75 (111)
T 3uvt_A 3 LGSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT---AERNICSKYS--- 75 (111)
T ss_dssp --CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT---TCHHHHHHTT---
T ss_pred CCCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc---ccHhHHHhcC---
Confidence 345689999999999987 7799999999999999999999999999875 35799999999 4556999999
Q ss_pred cccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...|.|.++.+.|.+|+.+.
T Consensus 76 ---v~~~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 76 ---VRGYPTLLLFRGGKK----VSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp ---CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHH
T ss_pred ---CCcccEEEEEeCCcE----EEeccCCcCHHHHHHHHHhc
Confidence 999999999988865 45788999999999999875
No 29
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=2.1e-18 Score=145.43 Aligned_cols=106 Identities=17% Similarity=0.318 Sum_probs=94.6
Q ss_pred cceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhh----ccceEEEEEcccchhhhHHHhhCCCC
Q 014549 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIG 209 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~----~~~~~~~Vdc~~~~~~~~l~~~~~~~ 209 (423)
.+.|.+|+.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+. +.+.|+.|||++ ...+|++++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~---~~~l~~~~~-- 80 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV---NQVLASRYG-- 80 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT---CCHHHHHHT--
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC---CHHHHHhCC--
Confidence 3458999999999876 778999999999999999999999999999998 679999999994 456999999
Q ss_pred ccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 210 ~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|.++||+++|.+|+. ...|.|.++.+.|.+|+.+.+
T Consensus 81 ----v~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 81 ----IRGFPTIKIFQKGES----PVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp ----CCSSSEEEEEETTEE----EEEECSCCSHHHHHHHHHHHH
T ss_pred ----CCeeCeEEEEeCCCc----eEEecCCCCHHHHHHHHHHHh
Confidence 999999999998764 467899999999999998874
No 30
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.74 E-value=3e-18 Score=140.75 Aligned_cols=101 Identities=9% Similarity=0.071 Sum_probs=91.8
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
|++|+.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+++ .++|++++ |.++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~~---~~l~~~~~------v~~~ 72 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDEN---QETAGKYG------VMSI 72 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTTC---CSHHHHTT------CCSB
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcC------CCcc
Confidence 6789999999988 889999999999999999999999999999988899999999954 45999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
||+++|.+|+. ...|.|..+.++|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (112)
T 2voc_A 73 PTLLVLKDGEV----VETSVGFKPKEALQELVNKH 103 (112)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 99999977765 45788999999999999877
No 31
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.74 E-value=2.8e-18 Score=139.16 Aligned_cols=103 Identities=17% Similarity=0.309 Sum_probs=94.0
Q ss_pred eeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.|.++|.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....++++++ |.+
T Consensus 5 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------i~~ 75 (109)
T 3tco_A 5 VTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD---ENQKIADKYS------VLN 75 (109)
T ss_dssp CCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT---TCHHHHHHTT------CCS
T ss_pred eEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc---cCHHHHHhcC------ccc
Confidence 4789999999999988999999999999999999999999999999988999999999 4556999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|+. ...|.|.++.+.|.+|+.+.
T Consensus 76 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 76 IPTTLIFVNGQL----VDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEcCCcE----EEeeeccCCHHHHHHHHHHH
Confidence 999999988765 45788999999999999876
No 32
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.5e-18 Score=136.88 Aligned_cols=70 Identities=31% Similarity=0.506 Sum_probs=64.5
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP--STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~--~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
....|||++|||+++++.++||+|||+|++++|||+++. +.++|++|++||++|+||.+|..||.+|..+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 346799999999999999999999999999999999873 5778999999999999999999999998765
No 33
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.74 E-value=3.8e-18 Score=137.80 Aligned_cols=102 Identities=20% Similarity=0.270 Sum_probs=92.5
Q ss_pred eeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.|.+|+.++|++.+ ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....++++++ |++
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------v~~ 73 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGKADILKLDVD---ENPSTAAKYE------VMS 73 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHTT------CCS
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCCcEEEEEECC---cCHHHHHhCC------Ccc
Confidence 36889999999999 8999999999999999999999999999999988999999999 4456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|+. ...+.|.++.++|.+|+.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 74 IPTLIVFKDGQP----VDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp BSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred cCEEEEEeCCeE----EEEEeCCCCHHHHHHHHHHh
Confidence 999999988765 45788999999999999764
No 34
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.73 E-value=1.3e-17 Score=138.31 Aligned_cols=103 Identities=19% Similarity=0.385 Sum_probs=89.7
Q ss_pred ceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhc-----cceEEEEEcccchhhhHHHhhCCCC
Q 014549 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-----IANTGMVELGDIRLATHLAERKPIG 209 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-----~~~~~~Vdc~~~~~~~~l~~~~~~~ 209 (423)
+.|.+|+.++|++.+ .++++++|.||++||++|+++.|.|+++++.+.+ .+.++.|||++++ +++ +
T Consensus 7 ~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~----~~~--~-- 78 (121)
T 2djj_A 7 GPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAND----VPD--E-- 78 (121)
T ss_dssp CSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC----CSS--C--
T ss_pred CCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcccc----ccc--c--
Confidence 457999999999987 7889999999999999999999999999999987 6899999999654 554 6
Q ss_pred ccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 ~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+.. ....|.|.++.+.|.+|+.+.
T Consensus 79 ----v~~~Pt~~~~~~~~~~--~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 79 ----IQGFPTIKLYPAGAKG--QPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp ----CSSSSEEEEECSSCTT--SCCCCCCCSCHHHHHHHHHHT
T ss_pred ----cCcCCeEEEEeCcCCC--CceEecCCCCHHHHHHHHHhc
Confidence 9999999999988541 134788999999999999887
No 35
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=4.3e-18 Score=145.07 Aligned_cols=104 Identities=17% Similarity=0.304 Sum_probs=93.9
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~---~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.|.+|+.++|++.+.++++++|.||++||++|+++.|.|+++++.+.+. +.++.|||+ ....+|++|+
T Consensus 17 ~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~---~~~~~~~~~~----- 88 (140)
T 2dj1_A 17 NGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT---SASMLASKFD----- 88 (140)
T ss_dssp TTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT---TCHHHHHHTT-----
T ss_pred CCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc---ccHHHHHHCC-----
Confidence 45899999999999988999999999999999999999999999999876 899999999 4456999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|.++||+++|.+|+. ..|.|.++.+.|.+|+.+.+
T Consensus 89 -v~~~Pt~~~~~~G~~-----~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 89 -VSGYPTIKILKKGQA-----VDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCCCHHHHHHHHHHHH
T ss_pred -CCccCeEEEEECCcE-----EEcCCCCCHHHHHHHHHHhc
Confidence 999999999987753 47889999999999998873
No 36
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.73 E-value=5.9e-18 Score=137.39 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=91.5
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|++|+.++|++.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||+++ ..++++++ |.
T Consensus 3 ~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~------v~ 73 (108)
T 2trx_A 3 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYG------IR 73 (108)
T ss_dssp TEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTTC---TTHHHHTT------CC
T ss_pred cceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCCcEEEEEECCCC---HHHHHHcC------Cc
Confidence 47899999999655 7789999999999999999999999999999988899999999944 45999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|++|+. ...+.|..+.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 74 GIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCEE----EEEEecCCCHHHHHHHHHHh
Confidence 9999999987765 45678999999999999775
No 37
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.73 E-value=7.2e-18 Score=145.51 Aligned_cols=105 Identities=17% Similarity=0.306 Sum_probs=95.6
Q ss_pred eeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.+..++.++|++.+..+++++|.||++||++|+.+.|.|+++++.+.+.+.|+.||++ ....++++|+ |.+
T Consensus 39 ~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~---~~~~l~~~~~------v~~ 109 (148)
T 3p2a_A 39 EVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTE---AEPALSTRFR------IRS 109 (148)
T ss_dssp CCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHTT------CCS
T ss_pred CceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECc---CCHHHHHHCC------CCc
Confidence 3799999999999989999999999999999999999999999999888999999999 4556999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhc
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~ 254 (423)
+||+++|.+|+. ...|.|.++.+.|.+|+.+.+.
T Consensus 110 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 110 IPTIMLYRNGKM----IDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp SSEEEEEETTEE----EEEESSCCCHHHHHHHHHHHHH
T ss_pred cCEEEEEECCeE----EEEEeCCCCHHHHHHHHHHHhc
Confidence 999999988865 4578899999999999988744
No 38
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.73 E-value=4.2e-18 Score=137.56 Aligned_cols=102 Identities=12% Similarity=0.207 Sum_probs=91.0
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
|++|+.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++ ...++++++ |.++
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~---~~~~~~~~~------v~~~ 72 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADKVTVAKLNVDE---NPETTSQFG------IMSI 72 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTTCEEEEEETTT---CHHHHHHTT------CCSS
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCcEEEEEECcC---CHHHHHHcC------Cccc
Confidence 6889999999878888999999999999999999999999999998889999999994 456999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
||+++|.+|+. ...+.|..+.+.|.+|+.+.
T Consensus 73 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 103 (105)
T 1nsw_A 73 PTLILFKGGRP----VKQLIGYQPKEQLEAQLADV 103 (105)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHTTTT
T ss_pred cEEEEEeCCeE----EEEEecCCCHHHHHHHHHHH
Confidence 99999987764 45688999999999998654
No 39
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.72 E-value=8.9e-18 Score=135.80 Aligned_cols=103 Identities=17% Similarity=0.264 Sum_probs=91.8
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|++|+.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++ ...++++++ |.
T Consensus 3 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~------v~ 73 (107)
T 2i4a_A 3 HTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD---NPETPNAYQ------VR 73 (107)
T ss_dssp CEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT---CCHHHHHTT------CC
T ss_pred ceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC---CHHHHHhcC------CC
Confidence 47899999999766 788999999999999999999999999999998889999999994 456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|++|+. ...+.|..+.+.|.+|+.+.
T Consensus 74 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 74 SIPTLMLVRDGKV----IDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHT
T ss_pred ccCEEEEEeCCEE----EEEecCCCCHHHHHHHHHhc
Confidence 9999999987765 44688999999999999764
No 40
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.4e-18 Score=141.79 Aligned_cols=72 Identities=24% Similarity=0.289 Sum_probs=65.6
Q ss_pred CCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 33 ~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~---~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
.+...|||++|||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 3456899999999999999999999999999999999863 67899999999999999999999999986653
No 41
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.72 E-value=5.6e-18 Score=138.90 Aligned_cols=72 Identities=25% Similarity=0.414 Sum_probs=65.8
Q ss_pred CCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 33 ~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~---~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
++...|||++|||+++++.++||+|||+|++++|||++++ +.++|++|++||++|+||.+|+.||.+|..+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 4457899999999999999999999999999999999874 46789999999999999999999999997654
No 42
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.72 E-value=5.3e-18 Score=145.18 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=94.1
Q ss_pred ceeeEeccCCcc-cccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 136 HAFNVVTSEDFP-SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 136 ~~v~~L~~~nf~-~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
+.|.+|+.++|. .+++++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+ ....+|++++ |
T Consensus 6 ~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~---~~~~l~~~~~------v 76 (140)
T 3hz4_A 6 SSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIA---TNPWTAEKYG------V 76 (140)
T ss_dssp TTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETT---TCHHHHHHHT------C
T ss_pred cceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECC---cCHhHHHHCC------C
Confidence 347999999999 55688999999999999999999999999999999998999999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.++||+++|.+|+. ...|.|.++.+.|.+|+.+.
T Consensus 77 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 77 QGTPTFKFFCHGRP----VWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp CEESEEEEEETTEE----EEEEESSCCHHHHHHHHHHH
T ss_pred CcCCEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 99999999988865 45788999999999999887
No 43
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.72 E-value=6.4e-18 Score=136.85 Aligned_cols=103 Identities=15% Similarity=0.185 Sum_probs=92.8
Q ss_pred eeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.|++|+.++|+++++++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||++ ...++++++ |.+
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~------v~~ 72 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE---NPKTAMRYR------VMS 72 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT---CHHHHHHTT------CCS
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC---CHhHHHhCC------CCc
Confidence 37899999999888888999999999999999999999999999998889999999994 456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|+. ...+.|..+.++|.+|+.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 73 IPTVILFKDGQP----VEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp SSEEEEEETTEE----EEEEESCCCHHHHHHHHHTT
T ss_pred CCEEEEEeCCcE----eeeEeCCCCHHHHHHHHHHH
Confidence 999999987765 34688999999999999876
No 44
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=3.4e-18 Score=137.52 Aligned_cols=67 Identities=27% Similarity=0.525 Sum_probs=61.9
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 37 ~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~----~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
.|||++|||+++++.++||+|||+++++||||++++ +.++|++|++||++|+||.+|+.||.+|..+
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 489999999999999999999999999999999874 4678999999999999999999999998655
No 45
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.72 E-value=4.9e-18 Score=139.97 Aligned_cols=106 Identities=17% Similarity=0.312 Sum_probs=92.7
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhc---cceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~---~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.|.+|+.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+ .+.++.|||+++ ..+|++++
T Consensus 7 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~~~~~----- 78 (120)
T 1mek_A 7 DHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATEE---SDLAQQYG----- 78 (120)
T ss_dssp TTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTTC---CSSHHHHT-----
T ss_pred CCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCCC---HHHHHHCC-----
Confidence 3479999999999998899999999999999999999999999999874 479999999954 45899999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+.. ....|.|.++.+.|.+|+.+.
T Consensus 79 -v~~~Pt~~~~~~g~~~--~~~~~~g~~~~~~l~~~l~~~ 115 (120)
T 1mek_A 79 -VRGYPTIKFFRNGDTA--SPKEYTAGREADDIVNWLKKR 115 (120)
T ss_dssp -CCSSSEEEEEESSCSS--SCEECCCCSSHHHHHHHHHTT
T ss_pred -CCcccEEEEEeCCCcC--CcccccCccCHHHHHHHHHhc
Confidence 9999999999888641 125788999999999999876
No 46
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.72 E-value=7.5e-18 Score=135.08 Aligned_cols=101 Identities=13% Similarity=0.184 Sum_probs=91.3
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
|++||.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||+ ....++++++ |.++
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~v~~~---~~~~~~~~~~------v~~~ 70 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ-VGFGKLNSD---ENPDIAARYG------VMSL 70 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT---TCHHHHHHTT------CCSS
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC-ceEEEEECC---CCHHHHHhCC------cccc
Confidence 57899999999998889999999999999999999999999999988 999999999 4456999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
||+++|.+|+. ...|.|..+.++|.+|+.+.
T Consensus 71 Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 71 PTVIFFKDGEP----VDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp CEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEECCeE----hhhccCCCCHHHHHHHHHHH
Confidence 99999987765 45788999999999999876
No 47
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.72 E-value=9.5e-18 Score=146.45 Aligned_cols=102 Identities=17% Similarity=0.300 Sum_probs=93.1
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
+++++.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+ ....++++|+ |+++
T Consensus 49 ~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~---~~~~l~~~~~------i~~~ 119 (155)
T 2ppt_A 49 VAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQ---AHPAVAGRHR------IQGI 119 (155)
T ss_dssp EEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT---TSTHHHHHTT------CCSS
T ss_pred CccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCC---ccHHHHHHcC------CCcC
Confidence 688999999998888899999999999999999999999999999988999999999 4456999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
||+++|.+|+. ...|.|..+.++|.+|+.+.
T Consensus 120 Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 120 PAFILFHKGRE----LARAAGARPASELVGFVRGK 150 (155)
T ss_dssp SEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEeCCeE----EEEecCCCCHHHHHHHHHHH
Confidence 99999988765 45688999999999999876
No 48
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.72 E-value=6.5e-18 Score=140.48 Aligned_cols=106 Identities=13% Similarity=0.263 Sum_probs=92.0
Q ss_pred ceeeEeccCCccc-ccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 136 HAFNVVTSEDFPS-IFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 136 ~~v~~L~~~nf~~-~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
+.|.+||.++|.+ +++++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ...++|++++ |
T Consensus 3 ~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~---~~~~~~~~~~------v 73 (122)
T 3aps_A 3 QASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQ---AYPQTCQKAG------I 73 (122)
T ss_dssp CCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETT---TCHHHHHHTT------C
T ss_pred cchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCc---CCHHHHHHcC------C
Confidence 3478999999965 5588899999999999999999999999999999988999999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCC----CCHHHHHHHHHHhhc
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATAIL 254 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~----~~~~~l~~fi~~~~~ 254 (423)
.++||+++|.+|+. ...+.|. ++.+.|.+|+.+.+.
T Consensus 74 ~~~Pt~~~~~~~~~----~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 74 KAYPSVKLYQYERA----KKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp CSSSEEEEEEEEGG----GTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred CccceEEEEeCCCc----cceeeccccCcCCHHHHHHHHHHHHH
Confidence 99999999987754 3456665 899999999988744
No 49
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.71 E-value=1.5e-17 Score=136.07 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=91.7
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|.+++.++|.+.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||++ ...++++++ |.
T Consensus 6 ~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~---~~~~~~~~~------v~ 76 (112)
T 1t00_A 6 TLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDKIEIVKLNIDE---NPGTAAKYG------VM 76 (112)
T ss_dssp CCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT---CHHHHHHTT------CC
T ss_pred eEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCCeEEEEEEcCC---CHHHHHhCC------CC
Confidence 47899999998655 778999999999999999999999999999998889999999994 456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|+. ...+.|..+.+.|.+|+.+.
T Consensus 77 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 77 SIPTLNVYQGGEV----AKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHTHHH
T ss_pred cccEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999988765 45688999999999999876
No 50
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=139.70 Aligned_cols=102 Identities=19% Similarity=0.372 Sum_probs=90.1
Q ss_pred cceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 135 VHAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.+.|++||.++|+++++.. ++|.||++||++|+.+.|.|+++++.+.+ .+.++.|||+ ....+|++++
T Consensus 6 ~~~v~~l~~~~f~~~~~~~--vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~---~~~~~~~~~~------ 74 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEGD--WMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVT---EQPGLSGRFI------ 74 (126)
T ss_dssp CCSEEECCTTTHHHHTSSE--EEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETT---TCHHHHHHTT------
T ss_pred CCccEEecHHHHHHHhCCC--EEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECc---CCHHHHHHcC------
Confidence 3458999999999888543 99999999999999999999999999986 5899999999 4456999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ..|.|.++.+.|.+|+.+.
T Consensus 75 v~~~Pt~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 75 INALPTIYHCKDGEF-----RRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp CCSSSEEEEEETTEE-----EECCSCCCHHHHHHHHHTC
T ss_pred CcccCEEEEEeCCeE-----EEeecCCCHHHHHHHHHHH
Confidence 999999999977753 4789999999999999876
No 51
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=5.1e-18 Score=134.96 Aligned_cols=70 Identities=30% Similarity=0.509 Sum_probs=64.4
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~----~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
+...|||++|||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|..||.+|..+
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 446799999999999999999999999999999999874 4678999999999999999999999998765
No 52
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.71 E-value=2e-17 Score=135.51 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=92.4
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.|.+|+.++|++.+ .++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....+|++++ |.
T Consensus 8 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~---~~~~~~~~~~------v~ 78 (115)
T 1thx_A 8 GVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEID---PNPTTVKKYK------VE 78 (115)
T ss_dssp SEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEEST---TCHHHHHHTT------CC
T ss_pred ceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcC---CCHHHHHHcC------CC
Confidence 47999999999775 78899999999999999999999999999999888999999999 4456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|++|.. ...+.|.++.+.|.+|+.+.
T Consensus 79 ~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 79 GVPALRLVKGEQI----LDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ceeEEEEEcCCEE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999987765 34688999999999999876
No 53
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.71 E-value=7.7e-18 Score=136.53 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=76.9
Q ss_pred ccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEE
Q 014549 142 TSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 142 ~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
|.++|++.++++++++|.||+|||++|+.+.|.|+++++.+. .+.++.|||+++ ..++++++ |.++||++
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~~~~---~~l~~~~~------v~~~Pt~~ 76 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-YVEKIEILLQDM---QEIAGRYA------VFTGPTVL 76 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-TEEEEEEEECCC------------------CCCCEEE
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-CceEEEEECCCC---HHHHHhcC------CCCCCEEE
Confidence 567899999899999999999999999999999999999884 589999999944 45999999 99999999
Q ss_pred EeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 222 AFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 222 ~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+|.+|+. ...+.|..+.+.|.+++.+.
T Consensus 77 ~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 103 (105)
T 4euy_A 77 LFYNGKE----ILRESRFISLENLERTIQLF 103 (105)
T ss_dssp EEETTEE----EEEEESSCCHHHHHHHHHTT
T ss_pred EEeCCeE----EEEEeCCcCHHHHHHHHHHh
Confidence 9998865 45778999999999999765
No 54
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.71 E-value=9.5e-18 Score=142.27 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=92.4
Q ss_pred eeeEeccCCcccccCCC-CcEEEEEecCCC--ccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 137 AFNVVTSEDFPSIFHDS-KPWLIQVYSDGS--YLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~-~~~lV~FYapwC--~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
...++|+++|++.|.+. .+++|.|||+|| ++|+.++|..+++|+++.+.++|++||.+ .+++++.+|+
T Consensus 16 g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvD---e~~~la~~yg------ 86 (137)
T 2qsi_A 16 APTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAE---AERGLMARFG------ 86 (137)
T ss_dssp -CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGG---GHHHHHHHHT------
T ss_pred CCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECC---CCHHHHHHcC------
Confidence 34679999999988544 499999999999 99999999999999999999999999999 5566999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|++.||+++|++|+. .....|.++.+.|.+++.+.
T Consensus 87 V~siPTlilFkdG~~----v~~~vG~~~k~~l~~~l~~~ 121 (137)
T 2qsi_A 87 VAVCPSLAVVQPERT----LGVIAKIQDWSSYLAQIGAM 121 (137)
T ss_dssp CCSSSEEEEEECCEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CccCCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999999999987 56778999999999999876
No 55
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.71 E-value=4.3e-18 Score=138.26 Aligned_cols=69 Identities=28% Similarity=0.521 Sum_probs=63.9
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC---ChHHHHHHHHHHHHHcCChhhHhhhhhcCCchh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI---PSTADFLKIQYAYELLTDPLWKRNYDVYGIDEQ 104 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~---~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 104 (423)
..|||+||||+++++.++||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||.+|+.+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 469999999999999999999999999999999986 367889999999999999999999999998753
No 56
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.71 E-value=1.1e-17 Score=141.12 Aligned_cols=105 Identities=15% Similarity=0.216 Sum_probs=92.3
Q ss_pred cceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 135 VHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.+.|++|+.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+++ .+++++++
T Consensus 21 ~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~~---~~l~~~~~------ 91 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYG------ 91 (128)
T ss_dssp CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTTC---CTTSGGGT------
T ss_pred ccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCCC---HHHHHHcC------
Confidence 3447999999999655 7889999999999999999999999999999988899999999954 45899999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.|..+.+.|.+|+.+.
T Consensus 92 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 92 IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCccCEEEEEeCCEE----EEEEcCCCCHHHHHHHHHHh
Confidence 999999999977765 45688999999999999875
No 57
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.71 E-value=2.6e-17 Score=157.55 Aligned_cols=103 Identities=17% Similarity=0.288 Sum_probs=93.8
Q ss_pred eeeEeccCCcccccCC--CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 137 AFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~--~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
.|+++|.++|++++.. +++++|.||+|||++|+.+.|.|+++++++.+.+.|++|||+ ....+|++|+ |
T Consensus 8 ~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~---~~~~~~~~~~------v 78 (287)
T 3qou_A 8 NIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCD---AEQMIAAQFG------L 78 (287)
T ss_dssp TEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETT---TCHHHHHTTT------C
T ss_pred ccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCc---cCHHHHHHcC------C
Confidence 4799999999998843 899999999999999999999999999999988999999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+++||+++|.+|+. ...|.|..+.+.+.+|+.+.
T Consensus 79 ~~~Pt~~~~~~G~~----~~~~~g~~~~~~l~~~l~~~ 112 (287)
T 3qou_A 79 RAIPTVYLFQNGQP----VDGFQGPQPEEAIRALLDXV 112 (287)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCCCeEEEEECCEE----EEEeeCCCCHHHHHHHHHHH
Confidence 99999999988865 45789999999999999887
No 58
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.71 E-value=2.5e-17 Score=139.04 Aligned_cols=107 Identities=17% Similarity=0.268 Sum_probs=91.5
Q ss_pred cceeeEeccCCcccccC-CCCcEEEEEecCCCccccccHHHHHHHHHHhh--ccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 135 VHAFNVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~-~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~--~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
.+.|.+|+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. +.+.++.|||+++ ..++++|+
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~---- 78 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATAN---DITNDQYK---- 78 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTTS---CCCCSSCC----
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCcC---HHHHhhcC----
Confidence 34589999999999884 58999999999999999999999999999998 4589999999954 44788888
Q ss_pred ccccCccEEEEeCCCCCCCCCccccc-CCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFE-GELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~-G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|... ....|. |.++.+.|.+|+.+.
T Consensus 79 --v~~~Pt~~~~~~g~~~--~~~~~~gg~~~~~~l~~~l~~~ 116 (133)
T 2dj3_A 79 --VEGFPTIYFAPSGDKK--NPIKFEGGNRDLEHLSKFIDEH 116 (133)
T ss_dssp --CSSSSEEEEECTTCTT--SCEECCSSCCSTTHHHHHHHHH
T ss_pred --CCcCCEEEEEeCCCcc--cceEecCCCcCHHHHHHHHHHh
Confidence 9999999999987642 123577 568999999999988
No 59
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.70 E-value=2.4e-17 Score=140.72 Aligned_cols=105 Identities=15% Similarity=0.177 Sum_probs=91.4
Q ss_pred cceeeEeccCCcccccC------------CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHH
Q 014549 135 VHAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHL 202 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~------------~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l 202 (423)
.+.|++|+.++|.+.+. .+++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....+
T Consensus 21 ~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~ 97 (141)
T 3hxs_A 21 QSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVD---KEPEL 97 (141)
T ss_dssp --CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHH
T ss_pred CCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECC---CCHHH
Confidence 34578999999998773 4799999999999999999999999999999988999999999 44569
Q ss_pred HhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 203 AERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 203 ~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|++|+ |.++||+++|.+++. ...|.|.++.+.|.+|+.+.
T Consensus 98 ~~~~~------v~~~Pt~~~~~~~g~----~~~~~G~~~~~~l~~~l~~~ 137 (141)
T 3hxs_A 98 ARDFG------IQSIPTIWFVPMKGE----PQVNMGALSKEQLKGYIDKV 137 (141)
T ss_dssp HHHTT------CCSSSEEEEECSSSC----CEEEESCCCHHHHHHHHHHT
T ss_pred HHHcC------CCCcCEEEEEeCCCC----EEEEeCCCCHHHHHHHHHHH
Confidence 99999 999999999965544 34788999999999999876
No 60
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.70 E-value=4.5e-18 Score=144.80 Aligned_cols=103 Identities=9% Similarity=0.092 Sum_probs=94.1
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCC--CccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapw--C~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
+..+|+++|++.|.++.++||.||++| |++|+.++|.++++|+++.|. ++|++||.+ .+++++.+|+ |
T Consensus 19 ~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD---e~~~lA~~yg------V 89 (140)
T 2qgv_A 19 WTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE---QSEAIGDRFG------A 89 (140)
T ss_dssp CEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH---HHHHHHHHHT------C
T ss_pred CccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC---CCHHHHHHcC------C
Confidence 467999999998888889999999999 999999999999999999999 999999999 5566999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
++.||+++|++|+. .....|..+.+.|.+|+.+.+
T Consensus 90 ~sIPTlilFk~G~~----v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 90 FRFPATLVFTGGNY----RGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp CSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred ccCCEEEEEECCEE----EEEEecCCCHHHHHHHHHHHh
Confidence 99999999999987 467789999999999998773
No 61
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.5e-17 Score=133.97 Aligned_cols=69 Identities=23% Similarity=0.344 Sum_probs=62.7
Q ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC---hHHHHHHHHHHHHHcCChhhHhhhhhcCCc
Q 014549 34 SFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---STADFLKIQYAYELLTDPLWKRNYDVYGID 102 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~---~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 102 (423)
....|||+||||+++++.++||+|||+|+++||||++++ +.++|++|++||++|+||.+|+.||.+...
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 347799999999999999999999999999999999863 577899999999999999999999986443
No 62
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.70 E-value=1.7e-17 Score=134.34 Aligned_cols=102 Identities=15% Similarity=0.216 Sum_probs=91.1
Q ss_pred eeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.++|.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....++++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------v~~ 73 (107)
T 1dby_A 3 AGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDKLKCVKLNTD---ESPNVASEYG------IRS 73 (107)
T ss_dssp CEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHHT------CCS
T ss_pred cEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCceEEEEEECC---CCHHHHHHCC------CCc
Confidence 6789999999866 67899999999999999999999999999999888999999999 4456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|+. ...+.|..+.+.|.+++.+.
T Consensus 74 ~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 74 IPTIMVFKGGKK----CETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp SCEEEEESSSSE----EEEEESCCCHHHHHHHHHHH
T ss_pred CCEEEEEeCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999988865 45678999999999999775
No 63
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.70 E-value=3.2e-17 Score=139.47 Aligned_cols=104 Identities=16% Similarity=0.161 Sum_probs=91.8
Q ss_pred cceeeEeccCCcccccC------------CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHH
Q 014549 135 VHAFNVVTSEDFPSIFH------------DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHL 202 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~------------~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l 202 (423)
...|++||.++|.+.+. ++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....+
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~---~~~~l 84 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTE---KEQEL 84 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHH
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCC---CCHHH
Confidence 34578999999998773 4689999999999999999999999999999888999999999 44569
Q ss_pred HhhCCCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 203 AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 203 ~~~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|++++ |.++||+++| .+|+. ..|.|..+.+.|.+|+.+.
T Consensus 85 ~~~~~------v~~~Pt~~~~~~~G~~-----~~~~G~~~~~~l~~~l~~~ 124 (136)
T 2l5l_A 85 AGAFG------IRSIPSILFIPMEGKP-----EMAQGAMPKASFKKAIDEF 124 (136)
T ss_dssp HHHTT------CCSSCEEEEECSSSCC-----EEEESCCCHHHHHHHHHHH
T ss_pred HHHcC------CCCCCEEEEECCCCcE-----EEEeCCCCHHHHHHHHHHH
Confidence 99999 9999999999 66654 2688999999999999887
No 64
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.70 E-value=1.5e-17 Score=137.81 Aligned_cols=106 Identities=17% Similarity=0.192 Sum_probs=92.5
Q ss_pred CcceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 134 SVHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 134 ~~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
..+.|.+|+.++|.+.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....+|++++
T Consensus 10 ~~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~----- 81 (121)
T 2i1u_A 10 EKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVD---TNPETARNFQ----- 81 (121)
T ss_dssp --CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHTT-----
T ss_pred hcccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEECC---CCHHHHHhcC-----
Confidence 34558999999998655 77899999999999999999999999999999888999999999 4456999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.|..+.+.|.+|+.+.
T Consensus 82 -i~~~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 116 (121)
T 2i1u_A 82 -VVSIPTLILFKDGQP----VKRIVGAKGKAALLRELSDV 116 (121)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHTCSC
T ss_pred -CCcCCEEEEEECCEE----EEEecCCCCHHHHHHHHHHH
Confidence 999999999988765 45688999999999998765
No 65
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.70 E-value=9.6e-18 Score=138.83 Aligned_cols=100 Identities=10% Similarity=0.130 Sum_probs=89.1
Q ss_pred eeEeccCCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 138 FNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 138 v~~L~~~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
....|.++|++.+. ++++++|.||++||++|+++.|.|+++++.+.+ +.|+.|||+ ....++++|+ |.
T Consensus 14 ~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d---~~~~l~~~~~------v~ 83 (116)
T 3qfa_C 14 KQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVD---DCQDVASECE------VK 83 (116)
T ss_dssp BCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETT---TTHHHHHHTT------CC
T ss_pred cCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC---CCHHHHHHcC------Cc
Confidence 35578889999996 899999999999999999999999999999887 999999999 4556999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|+. ...+.|. +.+.|.+|+.+.
T Consensus 84 ~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 84 SMPTFQFFKKGQK----VGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp SSSEEEEESSSSE----EEEEESC-CHHHHHHHHHHH
T ss_pred cccEEEEEeCCeE----EEEEcCC-CHHHHHHHHHHh
Confidence 9999999988865 4568898 999999999765
No 66
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.70 E-value=2.1e-17 Score=137.21 Aligned_cols=106 Identities=17% Similarity=0.258 Sum_probs=93.3
Q ss_pred CcceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 134 SVHAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 134 ~~~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
.-+.|..++.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....++++++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~v~~~~vd~d---~~~~l~~~~~----- 82 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGKVVMAKVDID---DHTDLAIEYE----- 82 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEETT---TTHHHHHHTT-----
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCC---CCHHHHHHcC-----
Confidence 34458999999999865 77899999999999999999999999999999888999999999 4456999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...|.|.++.+.|.+|+.+.
T Consensus 83 -v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 83 -VSAVPTVLAMKNGDV----VDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp -CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred -CCcccEEEEEeCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 999999999987765 34688999999999999765
No 67
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.70 E-value=3e-17 Score=132.17 Aligned_cols=102 Identities=14% Similarity=0.203 Sum_probs=90.6
Q ss_pred eeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.++|.++|++.+ .++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||+ ....+|++++ |.+
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------v~~ 72 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGKIAVYKLNTD---EAPGIATQYN------IRS 72 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETT---TCHHHHHHTT------CCS
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCceEEEEEcCc---chHHHHHhCC------CCc
Confidence 5789999999866 67899999999999999999999999999999888999999999 4456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|++|+. ...+.|..+.+.+.+++.+.
T Consensus 73 ~Pt~~~~~~g~~----~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 73 IPTVLFFKNGER----KESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp SSEEEEEETTEE----EEEEEECCCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEecCCCHHHHHHHHHhh
Confidence 999999988765 34678999999999999764
No 68
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.69 E-value=4.8e-17 Score=152.49 Aligned_cols=105 Identities=12% Similarity=0.106 Sum_probs=91.1
Q ss_pred cceeeEeccCCcccccCCCCcEEEEEe--cCCCccccccHHHHHHHHHHhhc---cceEEEEEccc--chhhhHHHhhCC
Q 014549 135 VHAFNVVTSEDFPSIFHDSKPWLIQVY--SDGSYLCGQFSGAWKTIAALLEG---IANTGMVELGD--IRLATHLAERKP 207 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~~~~~~lV~FY--apwC~~C~~~~p~~~~~A~~l~~---~~~~~~Vdc~~--~~~~~~l~~~~~ 207 (423)
.+.|++||..||+++++++.+|||.|| ||||+ +.|.|+++|+.+.+ .+.|++|||++ ...+.++|++|+
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~ 90 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYK 90 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTT
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhC
Confidence 344799999999998888999999999 99999 99999999999964 58999999995 112567999999
Q ss_pred CCcccccc--CccEEEEeCCCCCCCCCcccc--cCCCCHHHHHHHHHHh
Q 014549 208 IGQIFFRR--GLPSLVAFPPGCKSSDCMTRF--EGELSVDAVTDWFATA 252 (423)
Q Consensus 208 ~~~~~~i~--~~Pti~~f~~g~~~~~~~~~y--~G~~~~~~l~~fi~~~ 252 (423)
|+ +||||++|+ |.. ..+..| .|.++.++|.+|+.+.
T Consensus 91 ------V~~~~~PTl~~F~-G~~--~~~~~y~~~G~~~~~~L~~fi~~~ 130 (248)
T 2c0g_A 91 ------VDDKNFPSIFLFK-GNA--DEYVQLPSHVDVTLDNLKAFVSAN 130 (248)
T ss_dssp ------CCTTSCCEEEEES-SSS--SSEEECCTTSCCCHHHHHHHHHHH
T ss_pred ------CCcCCCCeEEEEe-CCc--CcceeecccCCCCHHHHHHHHHHh
Confidence 99 999999999 862 125688 8999999999999987
No 69
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.69 E-value=1.2e-17 Score=133.32 Aligned_cols=67 Identities=21% Similarity=0.450 Sum_probs=61.4
Q ss_pred CcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC---------hHHHHHHHHHHHHHcCChhhHhhhhhcCC
Q 014549 35 FPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP---------STADFLKIQYAYELLTDPLWKRNYDVYGI 101 (423)
Q Consensus 35 ~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~---------~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 101 (423)
...|||+||||+++++.++||+|||+|+++||||+++. +.++|++|++||++|+||.+|+.||.+..
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 36799999999999999999999999999999999752 46789999999999999999999998754
No 70
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.68 E-value=2.6e-17 Score=137.95 Aligned_cols=103 Identities=17% Similarity=0.258 Sum_probs=85.0
Q ss_pred eeeEeccCCccccc-CCCCcEEEEEecCCCc--------------cccccHHHHHHHHHHhhccceEEEEEcccchhhhH
Q 014549 137 AFNVVTSEDFPSIF-HDSKPWLIQVYSDGSY--------------LCGQFSGAWKTIAALLEGIANTGMVELGDIRLATH 201 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~--------------~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~ 201 (423)
.|++|+.++|++.+ +++++++|.||+|||+ +|+.+.|.|+++++.+.+.+.+++|||+++ ..
T Consensus 4 ~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~---~~ 80 (123)
T 1oaz_A 4 KIIHLTDDSFDTDVLKADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PG 80 (123)
T ss_dssp SCEECCSTTHHHHTTSCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-------CEEEEEETTSC---TT
T ss_pred ccEecChhhHHHHHHhCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCC---HH
Confidence 47899999998654 7899999999999999 999999999999999988899999999954 45
Q ss_pred HHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 202 LAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 202 l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++++|+ |+++||+++|.+|+. ...+.|.++.++|.+|+.+.
T Consensus 81 l~~~~~------v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 121 (123)
T 1oaz_A 81 TAPKYG------IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDAN 121 (123)
T ss_dssp TGGGGT------CCBSSEEEEEESSSE----EEEEESCCCHHHHHHHHTTT
T ss_pred HHHHcC------CCccCEEEEEECCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999 999999999987765 45688999999999998764
No 71
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.68 E-value=1.4e-17 Score=136.64 Aligned_cols=70 Identities=26% Similarity=0.301 Sum_probs=63.8
Q ss_pred CCcccccccccccCCC-CHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhHhhhhhcCCch
Q 014549 34 SFPPSHYDALGIKPYS-SVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDVYGIDE 103 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a-~~~~ik~ayr~l~~~~hPd~~~~------~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 103 (423)
....|||++|||++++ +.++||+|||++++++|||++++ +.++|++|++||++|+||.+|..||.+|...
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 3467999999999999 99999999999999999999864 5678999999999999999999999987654
No 72
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.68 E-value=7.4e-17 Score=135.70 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=85.4
Q ss_pred eccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEE
Q 014549 141 VTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 141 L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti 220 (423)
++.+.++....++++++|.||++||++|+++.|.|+++++.+.+.+.++.|||+ ....++++++ |.++||+
T Consensus 30 ~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d---~~~~l~~~~~------v~~~Pt~ 100 (128)
T 3ul3_B 30 NGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLD---KNESLARKFS------VKSLPTI 100 (128)
T ss_dssp CCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGG---GCHHHHHHTT------CCSSSEE
T ss_pred CCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECC---CCHHHHHHcC------CCCcCEE
Confidence 444445566688999999999999999999999999999999988999999999 4456999999 9999999
Q ss_pred EEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 221 VAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 221 ~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
++|.+|+. ...+.|.++.++|.+|+.+
T Consensus 101 ~~~~~G~~----~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 101 ILLKNKTM----LARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp EEEETTEE----EEEESSCCCHHHHHHHHTT
T ss_pred EEEECCEE----EEEecCCCCHHHHHHHHHh
Confidence 99987765 4578899999999999864
No 73
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.68 E-value=9.8e-17 Score=131.11 Aligned_cols=104 Identities=13% Similarity=0.155 Sum_probs=89.0
Q ss_pred cceeeEeccCCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 135 VHAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
.+.|.+|+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||++. ...++++++
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~-v~~~~vd~~~~--~~~~~~~~~----- 75 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELG----- 75 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHC-----
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC-eEEEEEecCcc--hHHHHHHcC-----
Confidence 34589999999999885 589999999999999999999999999999875 89999999821 245999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||++++++|+. ...+.|.. .+.|.+++.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 76 -IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp -CSBSSEEEEESSSSE----EEEEESSC-HHHHHHHHHHH
T ss_pred -CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 999999999998875 34677874 88999998765
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.67 E-value=6e-17 Score=136.14 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=89.1
Q ss_pred eeEecc-CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~-~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.+|+. ++|++.+.++++++|.||++||++|+.+.|.|+++++.+. .+.|+.|||+ ...++|++++ |.+
T Consensus 21 v~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~v~~~~vd~d---~~~~l~~~~~------v~~ 90 (125)
T 1r26_A 21 VVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-TVKFAKVDAD---NNSEIVSKCR------VLQ 90 (125)
T ss_dssp CEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-TSEEEEEETT---TCHHHHHHTT------CCS
T ss_pred eEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-CCEEEEEECC---CCHHHHHHcC------CCc
Confidence 788999 9999999889999999999999999999999999999984 4899999999 4456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|.. ...+.| .+.+.|.+|+.+.
T Consensus 91 ~Pt~~i~~~G~~----~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 91 LPTFIIARSGKM----LGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp SSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred ccEEEEEeCCeE----EEEEeC-CCHHHHHHHHHHH
Confidence 999999988865 446778 6889999999876
No 75
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=1.3e-17 Score=141.95 Aligned_cols=104 Identities=16% Similarity=0.280 Sum_probs=88.6
Q ss_pred ceeeEeccCCcccccCC--CCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~--~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.|.++|.++|++.+.. .++++|.||++||++|+.+.|.|+++++++.+ .+.|+.|||+ ....+|++++
T Consensus 7 ~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~---~~~~~~~~~~----- 78 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG---RYTDVSTRYK----- 78 (137)
T ss_dssp SCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT---TCHHHHHHTT-----
T ss_pred ceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc---cCHHHHHHcc-----
Confidence 34789999999998833 44999999999999999999999999999986 6899999999 4456999999
Q ss_pred ccc------CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRR------GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~------~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|. ++||+++|.+|+. ...+.|..+.+.|.+|+.+.
T Consensus 79 -v~~~~~~~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 79 -VSTSPLTKQLPTLILFQGGKE----AMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp -CCCCSSSSCSSEEEEESSSSE----EEEESCBCSSSCBCCCCCCH
T ss_pred -CcccCCcCCCCEEEEEECCEE----EEEecCcCchHHHHHHHhcc
Confidence 87 9999999988865 45678888888887777543
No 76
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.67 E-value=1.5e-16 Score=136.92 Aligned_cols=102 Identities=11% Similarity=0.103 Sum_probs=78.0
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCC--CccccccHHHHHHHHHHhhccce--EEEEEcccchhhhHHHhhCCCCcccc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALLEGIAN--TGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapw--C~~C~~~~p~~~~~A~~l~~~~~--~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
+..||.++|++.+.+...++|.||++| |++|+.+.|.|+++++++ +.+. |++||++ ...+++++|+
T Consensus 19 ~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d---~~~~la~~~~------ 88 (142)
T 2es7_A 19 WQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLE---QSEAIGDRFN------ 88 (142)
T ss_dssp CEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHH---HHHHHHHTTT------
T ss_pred CcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECC---CCHHHHHhcC------
Confidence 578999999999987778999999987 999999999999999999 7788 9999999 5566999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|+++||+++|++|+. ...+.|.++.+.|.+|+.+.+
T Consensus 89 V~~iPT~~~fk~G~~----v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 89 VRRFPATLVFTDGKL----RGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CCSSSEEEEESCC--------CEESCCCHHHHHHHHHHHH
T ss_pred CCcCCeEEEEeCCEE----EEEEeCCCCHHHHHHHHHHHh
Confidence 999999999998876 457889999999999998873
No 77
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.67 E-value=1.1e-16 Score=129.80 Aligned_cols=100 Identities=13% Similarity=0.169 Sum_probs=84.7
Q ss_pred eeEe-ccCCccccc--CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 138 FNVV-TSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L-~~~nf~~~v--~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
|.++ +.++|++.+ .++++++|.||+|||++|+.+.|.|+++++.+ +.+.++.||++ ....++++++ |
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~---~~~~~~~~~~------v 72 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVH---QCQGTAATNN------I 72 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETT---TSHHHHHHTT------C
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECc---cCHHHHHhcC------C
Confidence 4556 568899988 57899999999999999999999999999998 45899999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.++||+++|.+|+. ...+.|.. .++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 73 SATPTFQFFRNKVR----IDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp CSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EEEEeCCC-HHHHHHHHHHh
Confidence 99999999988865 34677854 56699998765
No 78
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.67 E-value=7.4e-17 Score=130.10 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=88.6
Q ss_pred eeEecc-CCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 138 FNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L~~-~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
|.+|++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+++.+.++.|||+ ....++++++ |
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------v 72 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVD---ECEDIAMEYN------I 72 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT---TCHHHHHHTT------C
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEecc---chHHHHHHcC------C
Confidence 567888 88998885 7899999999999999999999999999999877999999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.++||+++|.+|+. ...+.| .+.++|.+|+.+.
T Consensus 73 ~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 73 SSMPTFVFLKNGVK----VEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp CSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHT
T ss_pred CcccEEEEEcCCcE----EEEEcC-CCHHHHHHHHHHh
Confidence 99999999988865 456778 7889999998764
No 79
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.66 E-value=1.4e-15 Score=142.71 Aligned_cols=194 Identities=11% Similarity=0.095 Sum_probs=134.6
Q ss_pred Cccccc-CCCCcEEEEEecCC--CccccccHHHHHHHHHHh---hcc--ceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 145 DFPSIF-HDSKPWLIQVYSDG--SYLCGQFSGAWKTIAALL---EGI--ANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 145 nf~~~v-~~~~~~lV~FYapw--C~~C~~~~p~~~~~A~~l---~~~--~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.|.+++ +-..+++|.||++| |++|+.+.|.++++|+.. +|. +.|+.+||+ .+..+|++|+ |++
T Consensus 16 ql~~~~~~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d---~~~~~~~~~g------v~~ 86 (243)
T 2hls_A 16 ELRETLAEMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE---SDSDKFSEFK------VER 86 (243)
T ss_dssp HHHHHHTTCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT---TTHHHHHHTT------CCS
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC---cCHHHHHhcC------CCc
Confidence 454555 34679999999999 999999999999999883 444 899999999 4556999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhc-cCCceeecccchhhhhhhhhcCCCceEEEEEecC-CCC--C
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAIL-KLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-GER--A 292 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~-~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~-~~~--~ 292 (423)
+||+++| +| . ..|.|.++.+.+..|+..... ..+... ++ ++..+. +.......+++.|+++. +.| .
T Consensus 87 ~Pt~~i~-~g-~-----~~~~G~~~~~~l~~fv~~~l~~~~~~~~-l~-~~~~~~-~~~~~~~~~vv~F~a~wC~~C~~~ 156 (243)
T 2hls_A 87 VPTVAFL-GG-E-----VRWTGIPAGEEIRALVEVIMRLSEDESG-LE-DATKEA-LKSLKGRVHIETIITPSCPYCPYA 156 (243)
T ss_dssp SSEEEET-TT-T-----EEEESCCCTTHHHHHHHHHHHHHTTCCC-CC-HHHHHH-HHHCCSCEEEEEEECSSCSSHHHH
T ss_pred CCEEEEE-CC-c-----eeEcCCCcHHHHHHHHHHHHhccCCCCC-CC-HHHHHH-HHHcCCCcEEEEEECCCCCCcHHH
Confidence 9999999 55 3 489998888889998876521 111111 22 221222 22221122355566643 233 3
Q ss_pred chHHHHHHHhcc----ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 293 SPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 293 ~~~~~~~a~~~~----~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
.|.+..++..+. ..+.++.+... ..++++++|+|.++||+++ + +. +.|.|..+.+.|.+||.+..
T Consensus 157 ~p~l~~la~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~V~~vPt~~i--~-G~--~~~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 157 VLLAHMFAYEAWKQGNPVILSEAVEAY--ENPDIADKYGVMSVPSIAI--N-GY--LVFVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEEEETT--TCHHHHHHTTCCSSSEEEE--T-TE--EEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccccCCcEEEEEEECc--cCHHHHHHcCCeeeCeEEE--C-CE--EEEeCCCCHHHHHHHHHHHh
Confidence 566677777762 34566666432 2367899999999999988 3 22 34899999999999998853
No 80
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.66 E-value=1.1e-16 Score=130.77 Aligned_cols=99 Identities=15% Similarity=0.249 Sum_probs=86.7
Q ss_pred eEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCcc
Q 014549 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 139 ~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~P 218 (423)
...+.++|++.+.++++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||+ ....++++++ |.++|
T Consensus 10 ~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~---~~~~l~~~~~------v~~~P 79 (109)
T 3f3q_A 10 QFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVD---ELGDVAQKNE------VSAMP 79 (109)
T ss_dssp ECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT---TCHHHHHHTT------CCSSS
T ss_pred CCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECC---CCHHHHHHcC------CCccC
Confidence 4467789999999999999999999999999999999999999866 899999999 4556999999 99999
Q ss_pred EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 219 SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 219 ti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+++|.+|+. ...+.|. +.+.|.+++.+.
T Consensus 80 t~~~~~~G~~----~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 80 TLLLFKNGKE----VAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp EEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEECCEE----EEEEeCC-CHHHHHHHHHhh
Confidence 9999997765 4567788 679999998764
No 81
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.66 E-value=1.7e-16 Score=147.51 Aligned_cols=103 Identities=21% Similarity=0.317 Sum_probs=93.6
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc---ceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI---ANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~---~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.+..++.++|++.+.++++++|.||++||++|+.+.|.|+++|+.+.+. +.++.|||+ ...++|++++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~---~~~~l~~~~~----- 201 (241)
T 3idv_A 130 EVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDAT---AETDLAKRFD----- 201 (241)
T ss_dssp CSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETT---TCHHHHHHTT-----
T ss_pred ccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECC---CCHHHHHHcC-----
Confidence 34688999999999988899999999999999999999999999999765 899999999 4556999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ..|.|.++.++|.+|+.+.
T Consensus 202 -v~~~Pt~~~~~~g~~-----~~~~g~~~~~~l~~~l~~~ 235 (241)
T 3idv_A 202 -VSGYPTLKIFRKGRP-----YDYNGPREKYGIVDYMIEQ 235 (241)
T ss_dssp -CCSSSEEEEEETTEE-----EECCSCCSHHHHHHHHHHH
T ss_pred -CcccCEEEEEECCeE-----EEecCCCCHHHHHHHHHhh
Confidence 999999999998865 3699999999999999987
No 82
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.66 E-value=5.7e-17 Score=132.38 Aligned_cols=101 Identities=16% Similarity=0.235 Sum_probs=88.8
Q ss_pred eeEe-ccCCcccccCC----CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 138 FNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 138 v~~L-~~~nf~~~v~~----~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
|.++ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+.+.+.++.|||+ ....++++++
T Consensus 4 v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~---~~~~~~~~~~----- 75 (112)
T 1ep7_A 4 VIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVD---AVAAVAEAAG----- 75 (112)
T ss_dssp EEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT---TTHHHHHHHT-----
T ss_pred EEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCCeEEEEEECC---chHHHHHHcC-----
Confidence 6778 45889998854 899999999999999999999999999999878999999999 4556999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|.. ...+.|. +.+.|.+|+.+.
T Consensus 76 -v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 76 -ITAMPTFHVYKDGVK----ADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp -CCBSSEEEEEETTEE----EEEEESC-CHHHHHHHHHHH
T ss_pred -CCcccEEEEEECCeE----EEEEcCC-CHHHHHHHHHHH
Confidence 999999999988865 3467898 899999999876
No 83
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.66 E-value=1e-16 Score=148.17 Aligned_cols=106 Identities=16% Similarity=0.263 Sum_probs=94.7
Q ss_pred cceeeEeccCCcccc-cCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 135 VHAFNVVTSEDFPSI-FHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~-v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.+.+..||.++|++. ++++++++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+++ ..+|++|+
T Consensus 11 ~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~l~~~~~------ 81 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQN---PGTAPKYG------ 81 (222)
T ss_dssp SCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTC---TTTGGGGT------
T ss_pred CCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCCC---HHHHHHcC------
Confidence 345788999999975 58899999999999999999999999999999998899999999944 45899999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|.++||+++|.+|+. ...+.|.++.+.|.+|+.+.+
T Consensus 82 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 82 IRGIPTLLLFKNGEV----AATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp CCSBSEEEEEETTEE----EEEEESCCCHHHHHHHHHHHS
T ss_pred CCcCCEEEEEECCeE----EEEeccccChHHHHHHHHhhc
Confidence 999999999998865 457889999999999999883
No 84
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.66 E-value=1.5e-16 Score=135.89 Aligned_cols=104 Identities=16% Similarity=0.166 Sum_probs=78.0
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
..|.+|+.++|++.+..++.++|.||++||++|+.+.|.|+++++.+.+.+.|+.|||+ ....++++|+ |.
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~---~~~~l~~~~~------v~ 103 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVD---EHPGLAARYG------VR 103 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETT---TCHHHHHHTT------CC
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC---CCHHHHHHCC------CC
Confidence 34788999999988744434999999999999999999999999999888999999999 4456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|.. ...|.|..+.+.|.+|+.+.
T Consensus 104 ~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 104 SVPTLVLFRRGAP----VATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp SSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ccCEEEEEeCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999988865 35688999999999999876
No 85
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.66 E-value=1.3e-16 Score=130.48 Aligned_cols=101 Identities=9% Similarity=0.125 Sum_probs=84.4
Q ss_pred eeEecc-CCcccccCC---CCcEEEEEecCCCccccccHHHHHHHHHHhh-ccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 138 FNVVTS-EDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 138 v~~L~~-~nf~~~v~~---~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~-~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
|.+|+. ++|++.+.+ +++++|.||++||++|+.+.|.|+++++.++ +.+.++.|||+ ....++++++
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~---~~~~~~~~~~----- 73 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDAD---ENSEISELFE----- 73 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETT---TCHHHHHHTT-----
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEecc---cCHHHHHHcC-----
Confidence 678888 899998865 8999999999999999999999999999863 34899999999 4456999999
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.|.. .++|.+++.+.
T Consensus 74 -v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 74 -ISAVPYFIIIHKGTI----LKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp -CCSSSEEEEEETTEE----EEEECSCC-HHHHHHHHHHH
T ss_pred -CCcccEEEEEECCEE----EEEecCCC-HHHHHHHHHHH
Confidence 999999999988765 45677874 56799999776
No 86
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.66 E-value=7.4e-17 Score=139.13 Aligned_cols=106 Identities=11% Similarity=0.068 Sum_probs=87.7
Q ss_pred eeEecc-CCccccc--CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 138 FNVVTS-EDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L~~-~nf~~~v--~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
|.+|+. ++|++.| .++++++|.|||+||++|+.+.|.++++|+++.+.+.|++||.+++ ++++++|+ |
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe~---~e~a~~y~------V 93 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITEV---PDFNTMYE------L 93 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTTTT------C
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCCC---HHHHHHcC------C
Confidence 455665 7898877 4789999999999999999999999999999998899999999944 55999999 9
Q ss_pred cCccEEEEeCCCCCCC-C----CcccccCCCC-HHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSS-D----CMTRFEGELS-VDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~-~----~~~~y~G~~~-~~~l~~fi~~~ 252 (423)
.+.||+++|.+|+... + +.....|..+ .+.|.+++...
T Consensus 94 ~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 94 YDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp CSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred CCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 9999999999997610 0 0015678776 88899998766
No 87
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.65 E-value=1.8e-16 Score=147.99 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=90.2
Q ss_pred eeeEeccCCcccccCCCCcEEEEEec--CCCccccccHHHHHHHHHHhhc--cceEEEEEccc--chhhhHHHhhCCCCc
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYS--DGSYLCGQFSGAWKTIAALLEG--IANTGMVELGD--IRLATHLAERKPIGQ 210 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYa--pwC~~C~~~~p~~~~~A~~l~~--~~~~~~Vdc~~--~~~~~~l~~~~~~~~ 210 (423)
.|++||..||+++|+++++|||.||| |||+ +.|.|+++|+.+.+ .+.|++|||++ ...+.++|++|+
T Consensus 6 ~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~--- 78 (240)
T 2qc7_A 6 GALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYK--- 78 (240)
T ss_dssp TCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTT---
T ss_pred CceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcC---
Confidence 47899999999999888999999999 9999 99999999999974 58999999542 114567999999
Q ss_pred ccccc--CccEEEEeCCCC-CCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRR--GLPSLVAFPPGC-KSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~--~~Pti~~f~~g~-~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+ +||||++|++|. .. +..|.|.++.++|++|+.+.
T Consensus 79 ---V~~~~~PTl~~f~~G~~~~---~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 79 ---LDKESYPVFYLFRDGDFEN---PVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp ---CCGGGCSEEEEEETTCSSC---CEECCSCSCHHHHHHHHHHT
T ss_pred ---CCCCCCCEEEEEeCCCcCc---ceeecCCCCHHHHHHHHHHh
Confidence 99 999999999997 22 56899999999999999987
No 88
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.65 E-value=8.5e-17 Score=131.89 Aligned_cols=102 Identities=11% Similarity=0.213 Sum_probs=89.9
Q ss_pred ceeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 136 HAFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
+....++.++|++.++++++++|.||++||++|+.+.|.++++++.+.+ +.++.||++ ....++++++ |.
T Consensus 9 ~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~-v~~~~vd~~---~~~~~~~~~~------v~ 78 (112)
T 1syr_A 9 MVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYTK-MVFIKVDVD---EVSEVTEKEN------IT 78 (112)
T ss_dssp CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT---TTHHHHHHTT------CC
T ss_pred eEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CEEEEEECC---CCHHHHHHcC------CC
Confidence 4457789999999998899999999999999999999999999998864 899999999 4456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|.. ...+.|. +.+.|.+|+.+.
T Consensus 79 ~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 110 (112)
T 1syr_A 79 SMPTFKVYKNGSS----VDTLLGA-NDSALKQLIEKY 110 (112)
T ss_dssp SSSEEEEEETTEE----EEEEESC-CHHHHHHHHHTT
T ss_pred cccEEEEEECCcE----EEEEeCC-CHHHHHHHHHHh
Confidence 9999999988765 3467898 999999999764
No 89
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.65 E-value=1.3e-16 Score=128.65 Aligned_cols=96 Identities=11% Similarity=0.190 Sum_probs=84.5
Q ss_pred ccCCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccE
Q 014549 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (423)
Q Consensus 142 ~~~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pt 219 (423)
+.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||+ ....++++++ |.++||
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~---~~~~~~~~~~------v~~~Pt 76 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVD---DCQDVASESE------VKSMPT 76 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETT---TCHHHHHHTT------CCBSSE
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhh---hhHHHHHHcC------CCcCcE
Confidence 4567888885 789999999999999999999999999999877 899999999 4456999999 999999
Q ss_pred EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 220 LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 220 i~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+++|.+|+. ...+.|. +.+.|.+|+.+.
T Consensus 77 ~~~~~~g~~----~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 77 FQFFKKGQK----VGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp EEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred EEEEECCeE----EEEEeCC-CHHHHHHHHHHh
Confidence 999988865 4568898 999999999765
No 90
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.64 E-value=2.3e-15 Score=139.48 Aligned_cols=201 Identities=8% Similarity=0.059 Sum_probs=148.0
Q ss_pred eeEec-cCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~-~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
+++|+ .+++++.++++++++|-||++| |..+.++|.++|+.+ ..+.||.+. ..++|++++ +++
T Consensus 11 ~~~l~s~~~~~~~l~~~~v~vVgff~~~---~~~~~~~f~~~A~~l-~~~~F~~t~------~~~v~~~~~------v~~ 74 (227)
T 4f9z_D 11 PTWLTDVPAAMEFIAATEVAVIGFFQDL---EIPAVPILHSMVQKF-PGVSFGIST------DSEVLTHYN------ITG 74 (227)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCS---CSTHHHHHHHHTTTC-TTSEEEEEC------CHHHHHHTT------CCS
T ss_pred CeeeCCHHHHHHHHhcCCeEEEEEecCC---CchhHHHHHHHHHhC-CCceEEEEC------CHHHHHHcC------CCC
Confidence 46674 4889998999999999999998 568999999999999 478888754 234899999 888
Q ss_pred ccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEec-CC-C
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSK-TG-E 290 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~-~~-~ 290 (423)
|+|++|+++... ...|.| .++.++|.+|+... ..|....+|.++ ...+.... ....+++|.+ .+ +
T Consensus 75 -p~i~lfk~~~~~---~~~~~~~~~g~~~~~~l~~fi~~~--~~plv~e~t~~n-~~~~~~~~--~~~~~l~f~~~~~~~ 145 (227)
T 4f9z_D 75 -NTICLFRLVDNE---QLNLEDEDIESIDATKLSRFIEIN--SLHMVTEYNPVT-VIGLFNSV--IQIHLLLIMNKASPE 145 (227)
T ss_dssp -SEEEEEETTTTE---EEEECHHHHHTCCHHHHHHHHHHH--CCCSEEECCHHH-HHHHHHSS--CCEEEEEEECTTSTT
T ss_pred -CeEEEEEecCcc---cccccccccCCCCHHHHHHHHHHh--CCCceeecCccc-HHHHhccC--CceEEEEEEcCCcch
Confidence 999999975432 457874 89999999999988 466666677655 34444332 1245555532 21 1
Q ss_pred C--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCC--CCCeEEEecCCCcceeEe-cCCCChhHHHHHHHhh
Q 014549 291 R--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY-YGSFNNSRLSEVMEQN 363 (423)
Q Consensus 291 ~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~--~~Ptl~lfk~~~~~~~~y-~g~~~~~~l~~fi~~~ 363 (423)
+ ..+.++.+|.+|++.+.|+.+...+.....+++.||+. .+|+|+++...+.....+ .++++.+.|.+|++..
T Consensus 146 ~~~~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~ 223 (227)
T 4f9z_D 146 YEENMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGF 223 (227)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHH
Confidence 1 23566778999999999999875433335678999998 699999997544433333 3778999999999874
No 91
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.64 E-value=6.6e-16 Score=129.19 Aligned_cols=102 Identities=14% Similarity=0.145 Sum_probs=88.7
Q ss_pred eeEeccCCcc-----cccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEE--cccchhhhHHHhhCCCCc
Q 014549 138 FNVVTSEDFP-----SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--LGDIRLATHLAERKPIGQ 210 (423)
Q Consensus 138 v~~L~~~nf~-----~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vd--c~~~~~~~~l~~~~~~~~ 210 (423)
+..++..+|+ ....++++++|.||++||++|+.+.|.++++++.+.+.+.+..|| ++ ....++++++
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~d---~~~~~~~~~~--- 79 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGKFNIYYARLEEE---KNIDLAYKYD--- 79 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSSCEEEEEETTSS---HHHHHHHHTT---
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCCeEEEEEeCCCC---chHHHHHHcC---
Confidence 4567777777 555778999999999999999999999999999998779999999 88 5566999999
Q ss_pred cccccCccEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|. +|+. ...+.|..+.+.|.+|+.+.
T Consensus 80 ---v~~~Pt~~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 80 ---ANIVPTTVFLDKEGNK----FYVHQGLMRKNNIETILNSL 115 (126)
T ss_dssp ---CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHHH
T ss_pred ---CcceeEEEEECCCCCE----EEEecCCCCHHHHHHHHHHH
Confidence 99999999999 5654 34678999999999999887
No 92
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.64 E-value=1.9e-16 Score=130.69 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=87.3
Q ss_pred eeeEecc-CCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 137 AFNVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 137 ~v~~L~~-~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.|.+++. ++|++.+. ++++++|.||++||++|+.+.|.|+++++.+ .+.++.|||+ ....++++++
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~---~~~~~~~~~~------ 82 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD---KLEETARKYN------ 82 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT---TSHHHHHHTT------
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC---ccHHHHHHcC------
Confidence 3788988 89998885 7899999999999999999999999999887 6899999999 4556999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...+.| .+.+.|.+++.+.
T Consensus 83 v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 83 ISAMPTFIAIKNGEK----VGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred CCccceEEEEeCCcE----EEEEeC-CCHHHHHHHHHHh
Confidence 999999999988865 446778 6889999998764
No 93
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.63 E-value=2.6e-16 Score=128.78 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=87.2
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
+..++.++| +.+.++++++|.||++||++|+.+.|.|+++++.+. .+.++.||++ ...+++++++ |.++
T Consensus 5 ~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~---~~~~l~~~~~------v~~~ 73 (110)
T 2l6c_A 5 RDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-QVAISSVDSE---ARPELMKELG------FERV 73 (110)
T ss_dssp SBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-TSCEEEEEGG---GCHHHHHHTT------CCSS
T ss_pred eecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-CcEEEEEcCc---CCHHHHHHcC------Cccc
Confidence 356788999 677778999999999999999999999999998875 5899999999 4556999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
||+++|.+|+. ...+.|..+.+.|.+++.+.
T Consensus 74 Pt~~~~~~G~~----v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 74 PTLVFIRDGKV----AKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp CEEEEEESSSE----EEEEESCCCHHHHHHHHHTC
T ss_pred CEEEEEECCEE----EEEEcCCCCHHHHHHHHHHH
Confidence 99999988865 45788999999999999765
No 94
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.63 E-value=3.9e-16 Score=130.10 Aligned_cols=103 Identities=14% Similarity=0.182 Sum_probs=88.3
Q ss_pred ceeeEeccCCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 136 HAFNVVTSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
+.|.+++.++|.+.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||++. ...++++++
T Consensus 18 ~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~vd~~~~--~~~~~~~~~------ 88 (124)
T 1faa_A 18 GKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYLD-VIFLKLDCNQE--NKTLAKELG------ 88 (124)
T ss_dssp TSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEECSST--THHHHHHHC------
T ss_pred CceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCCC-CEEEEEecCcc--hHHHHHHcC------
Confidence 3478999999998884 689999999999999999999999999998875 79999999831 345999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...+.|.. .++|.+++.+.
T Consensus 89 v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 89 IRVVPTFKILKENSV----VGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp CSSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CCeeeEEEEEeCCcE----EEEEcCCC-HHHHHHHHHHh
Confidence 999999999988865 34677876 89999998765
No 95
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.63 E-value=2.1e-16 Score=131.25 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=88.3
Q ss_pred eeEeccCCcccccC----CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 138 FNVVTSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 138 v~~L~~~nf~~~v~----~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
+..++.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+.+ +.+..|||+ ....++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~vd~~---~~~~~~~~~~------ 84 (122)
T 2vlu_A 15 ISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN-AVFLKVDVD---ELKPIAEQFS------ 84 (122)
T ss_dssp EEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT---TCHHHHHHTT------
T ss_pred eeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-cEEEEEECC---CCHHHHHHcC------
Confidence 56678899998883 589999999999999999999999999999887 899999999 4456999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...+.|.. .+.|.+|+.+.
T Consensus 85 v~~~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 85 VEAMPTFLFMKEGDV----KDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp CCSSSEEEEEETTEE----EEEEESSC-HHHHHHHHHHH
T ss_pred CCcccEEEEEeCCEE----EEEEeCcC-HHHHHHHHHHH
Confidence 999999999988865 45688988 99999999876
No 96
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.63 E-value=1.3e-16 Score=135.77 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=89.6
Q ss_pred eeeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc------hhhhHHHhhCCCCc
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI------RLATHLAERKPIGQ 210 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~------~~~~~l~~~~~~~~ 210 (423)
.+.++|.++|++.+.+ +++|.|||+||++|+.+.|.|+++++.+. +.|+.|||++. .....++++|+
T Consensus 17 ~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~--- 89 (135)
T 3emx_A 17 RLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAG--- 89 (135)
T ss_dssp EEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHT---
T ss_pred ceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcC---
Confidence 4789999999999976 99999999999999999999999999886 89999999211 15667999999
Q ss_pred cccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.|..+.+.+.+++.+.
T Consensus 90 ---v~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 90 ---VEGTPTLVFYKEGRI----VDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp ---CCSSSEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred ---CceeCeEEEEcCCEE----EEEEeCCCCHHHHHHHHHHH
Confidence 999999999998865 45788999999999999887
No 97
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.4e-16 Score=125.97 Aligned_cols=60 Identities=23% Similarity=0.333 Sum_probs=56.2
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhHhh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRN 95 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~~~~~f~~i~~Ay~~L~~~~~r~~ 95 (423)
..|||+||||+++++.++||+|||+|+++||||+++ ++.++|++|++||++|+||.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 579999999999999999999999999999999985 688899999999999999998864
No 98
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.62 E-value=4e-16 Score=125.29 Aligned_cols=99 Identities=12% Similarity=0.260 Sum_probs=85.5
Q ss_pred eEecc-CCcccccC--CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 139 NVVTS-EDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 139 ~~L~~-~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
.++++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.++.|||+ ....++++++ |.
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~---~~~~~~~~~~------v~ 71 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVD---QNEEAAAKYS------VT 71 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT---TCHHHHHHTT------CC
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEecc---CCHHHHHHcC------Cc
Confidence 45666 78988885 78999999999999999999999999999886 5899999999 4456999999 99
Q ss_pred CccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++|.+|+. ...+.| .+.+.|.+|+.+.
T Consensus 72 ~~Pt~~~~~~g~~----~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 72 AMPTFVFIKDGKE----VDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp SSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHH
T ss_pred cccEEEEEeCCcE----EEEEeC-CCHHHHHHHHHhh
Confidence 9999999988765 346778 6899999998764
No 99
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.62 E-value=2.1e-17 Score=145.06 Aligned_cols=67 Identities=15% Similarity=0.181 Sum_probs=59.5
Q ss_pred CCcccccccccccCCCC--HHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhhcCC
Q 014549 34 SFPPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGI 101 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~--~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 101 (423)
+...|+|++|||+++|+ .++||+|||++++++|||++++ .++|++|++||++|+||.+|+.||++|.
T Consensus 8 ~~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 8 EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred cccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 44579999999999998 6999999999999999999854 6899999999999999999999999986
No 100
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.62 E-value=7.1e-17 Score=133.63 Aligned_cols=101 Identities=13% Similarity=0.169 Sum_probs=83.8
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc---hhhhHHHhhCCCCccccc
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~---~~~~~l~~~~~~~~~~~i 214 (423)
+..++.++|.+.+.++++++|.||+|||++|+++.|.|+++++.+... +..+|++.. .....++++++ |
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~------i 85 (118)
T 1zma_A 14 LEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLNDLQAFRSRYG------I 85 (118)
T ss_dssp SEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHHHHHHHHHHT------C
T ss_pred hhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHHHHHHHHHcC------C
Confidence 577888999988888899999999999999999999999999987644 444555422 13457899999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~ 250 (423)
.++||+++|.+|+. ...+.|.++.+.|.+|+.
T Consensus 86 ~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 86 PTVPGFVHITDGQI----NVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp CSSCEEEEEETTEE----EEECCTTCCHHHHHHHHT
T ss_pred CCCCeEEEEECCEE----EEEecCCCCHHHHHHHhh
Confidence 99999999988865 457889999999999984
No 101
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.62 E-value=2.9e-17 Score=135.05 Aligned_cols=66 Identities=15% Similarity=0.147 Sum_probs=61.3
Q ss_pred cccccccccccCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhhcCCc
Q 014549 36 PPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~--~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 102 (423)
..|+|+||||+++++. ++||+|||+|++++|||++++ .++|++|++||++|+||.+|+.||.+|..
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 4589999999999999 999999999999999999864 78999999999999999999999998754
No 102
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.62 E-value=2.2e-16 Score=136.90 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=87.2
Q ss_pred eccCCccccc--CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCcc
Q 014549 141 VTSEDFPSIF--HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 141 L~~~nf~~~v--~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~P 218 (423)
.+.++|++.+ .++++++|.||||||++|+.+.|.++++++++.+.+.++.||++ ....++++++ |.++|
T Consensus 9 ~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d---~~~~l~~~~~------v~~~P 79 (149)
T 3gix_A 9 TSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVD---QTAVYTQYFD------ISYIP 79 (149)
T ss_dssp CSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETT---TCCHHHHHTT------CCSSS
T ss_pred CCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECC---cCHHHHHHcC------CCccC
Confidence 3567888887 56899999999999999999999999999999888999999999 4456999999 99999
Q ss_pred EEEEeCCCCCC-----CCCcccccC-CCCHHHHHHHHHHh
Q 014549 219 SLVAFPPGCKS-----SDCMTRFEG-ELSVDAVTDWFATA 252 (423)
Q Consensus 219 ti~~f~~g~~~-----~~~~~~y~G-~~~~~~l~~fi~~~ 252 (423)
|+++|.+|+.. ......+.| ..+.+.|.+++.+.
T Consensus 80 t~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 80 STVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp EEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred eEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 99999988651 000046779 88999999999776
No 103
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.61 E-value=1.6e-16 Score=122.25 Aligned_cols=65 Identities=11% Similarity=0.118 Sum_probs=58.9
Q ss_pred cccccccccccCC--CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhhcCCc
Q 014549 36 PPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (423)
Q Consensus 36 ~~d~y~~lg~~~~--a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 102 (423)
..++|++|||+++ ++..+||+|||+|++++|||++ ++.++|++|++||++|+|+.+|.. +.||..
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~-~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~ 76 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLR-MNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS-CCHHHHHHHHHHHHHHHHHHHHHT-TCCSSC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC-CCHHHHHHHHHHHHHHhhHHHHHH-HhcCCc
Confidence 4689999999999 9999999999999999999997 568899999999999999999988 556653
No 104
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.61 E-value=3.4e-16 Score=136.65 Aligned_cols=69 Identities=22% Similarity=0.437 Sum_probs=62.3
Q ss_pred CCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCCh---------HHHHHHHHHHHHHcCChhhHhhhhhcCC
Q 014549 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIPS---------TADFLKIQYAYELLTDPLWKRNYDVYGI 101 (423)
Q Consensus 33 ~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~~---------~~~f~~i~~Ay~~L~~~~~r~~yd~~~~ 101 (423)
.....|||++|||+++++.++||+|||+|++++|||+++.. .++|..|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 34567999999999999999999999999999999998632 4789999999999999999999998654
No 105
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.61 E-value=3.1e-16 Score=129.40 Aligned_cols=99 Identities=11% Similarity=0.170 Sum_probs=84.6
Q ss_pred eeEecc-CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~-~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
+.++++ ++|+++++++++++|.||++||++|+.+.|.|+++++.+.+ +.++.|||+ ....++++++ |.+
T Consensus 14 ~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~---~~~~l~~~~~------v~~ 83 (114)
T 2oe3_A 14 ITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVD---ESPDIAKECE------VTA 83 (114)
T ss_dssp SCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETT---TCHHHHHHTT------CCS
T ss_pred eeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECC---CCHHHHHHCC------CCc
Confidence 455555 45677778889999999999999999999999999999887 999999999 4456999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
+||+++|++|+. ...+.|.. .+.|.+|+.+
T Consensus 84 ~Pt~~~~~~G~~----~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 84 MPTFVLGKDGQL----IGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp BSEEEEEETTEE----EEEEESSC-HHHHHHHHHT
T ss_pred ccEEEEEeCCeE----EEEEeCCC-HHHHHHHHHh
Confidence 999999988865 34688988 8999998864
No 106
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.61 E-value=5e-16 Score=129.31 Aligned_cols=102 Identities=17% Similarity=0.267 Sum_probs=89.2
Q ss_pred eeeEecc-CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 137 AFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 137 ~v~~L~~-~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
.+..+++ ++|++.++++++++|.||++||++|+.+.|.|+++++.+.+. +.++.|||+ ...+++++++ |
T Consensus 16 ~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d---~~~~~~~~~~------v 86 (121)
T 2j23_A 16 SVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVD---EQSQIAQEVG------I 86 (121)
T ss_dssp CEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETT---TCHHHHHHHT------C
T ss_pred ceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECc---CCHHHHHHcC------C
Confidence 3566666 789999988999999999999999999999999999998876 899999999 4456999999 9
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.++||+++|.+|+. ...+.|. +.+.|.+|+.+.
T Consensus 87 ~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 87 RAMPTFVFFKNGQK----IDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp CSSSEEEEEETTEE----EEEEESS-CHHHHHHHHHHH
T ss_pred CcccEEEEEECCeE----EeeEcCC-CHHHHHHHHHHh
Confidence 99999999988765 3467888 899999999875
No 107
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.40 E-value=5.1e-17 Score=130.64 Aligned_cols=102 Identities=21% Similarity=0.287 Sum_probs=89.4
Q ss_pred eeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.+|+.++|.+.+ +++++++|.||++||++|+.+.|.++++++.+.+.+.++.|||+ ....++++++ |.+
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~~~~~~~~------v~~ 73 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGKVKVVKVNVD---ENPNTAAQYG------IRS 73 (106)
Confidence 5789999999766 77899999999999999999999999999999888999999999 4455999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++|.+|+. ...|.|..+.+.|.+|+.+.
T Consensus 74 ~Pt~~~~~~g~~----~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 74 IPTLLLFKNGQV----VDRLVGAQPKEALKERIDKH 105 (106)
Confidence 999999987765 45788999999999998654
No 108
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.60 E-value=8.9e-16 Score=127.74 Aligned_cols=99 Identities=11% Similarity=0.175 Sum_probs=81.3
Q ss_pred eeeEeccCCccccc-CCCC--cEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 137 AFNVVTSEDFPSIF-HDSK--PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 137 ~v~~L~~~nf~~~v-~~~~--~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
.|.++|.++|.+.| ++.+ +++|.||||||++|+.+.|.++++|+++. .++|.+||++ . .+++|+
T Consensus 4 ~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d---~---~~~~~~------ 70 (118)
T 3evi_A 4 ELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVN---S---CIQHYH------ 70 (118)
T ss_dssp SCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGG---G---TSTTCC------
T ss_pred ceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhH---H---hHHHCC------
Confidence 37889999999877 3333 89999999999999999999999999985 4899999999 3 247777
Q ss_pred ccCccEEEEeCCCCCCCCCcccccC-------CCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G-------~~~~~~l~~fi~~~ 252 (423)
|+++||+++|++|+. ...+.| ..+.++|..++.+.
T Consensus 71 v~~~PT~~~fk~G~~----v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 71 DNCLPTIFVYKNGQI----EAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp GGGCSEEEEEETTEE----EEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred CCCCCEEEEEECCEE----EEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 999999999999976 344544 34688888888664
No 109
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.59 E-value=8.7e-16 Score=133.39 Aligned_cols=104 Identities=16% Similarity=0.233 Sum_probs=87.8
Q ss_pred cceeeEecc-CCcccccCC--CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 135 VHAFNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 135 ~~~v~~L~~-~nf~~~v~~--~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
...|.+++. ++|++.+.+ +++++|.||++||++|+.+.|.|+++++.+ +.+.|+.|||++ ...+|++|+
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~---~~~l~~~~~---- 82 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG---VPEVSEKYE---- 82 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT---SHHHHHHTT----
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC---CHHHHHHcC----
Confidence 344688874 889988865 899999999999999999999999999987 458999999994 456999999
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|.++||+++|.+|+. ...+.| .+.+.|.+|+.+.+
T Consensus 83 --v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 83 --ISSVPTFLFFKNSQK----IDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp --CCSSSEEEEEETTEE----EEEEES-SCHHHHHHHHHHHS
T ss_pred --CCCCCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHHh
Confidence 999999999997755 345667 47889999998873
No 110
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.59 E-value=1e-15 Score=128.19 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=87.5
Q ss_pred cceeeEe-ccCCcccccC----CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCC
Q 014549 135 VHAFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIG 209 (423)
Q Consensus 135 ~~~v~~L-~~~nf~~~v~----~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~ 209 (423)
...|.+| +.++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..||++ ....++++|+
T Consensus 15 ~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d---~~~~l~~~~~-- 88 (124)
T 1xfl_A 15 EGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD---ELKSVASDWA-- 88 (124)
T ss_dssp CSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT---TSHHHHHHTT--
T ss_pred CCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc---cCHHHHHHcC--
Confidence 3447888 5688998884 48999999999999999999999999999986 5899999999 4456999999
Q ss_pred ccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 QIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 ~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...+.| .+.+.|.+++.+.
T Consensus 89 ----v~~~Pt~~~~~~G~~----~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 89 ----IQAMPTFMFLKEGKI----LDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp ----CCSSSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred ----CCccCEEEEEECCEE----EEEEeC-CCHHHHHHHHHHh
Confidence 999999999988865 346778 4899999999775
No 111
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.57 E-value=2.4e-15 Score=138.62 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=88.2
Q ss_pred eEeccCCcccccCCCCcE-EEEEecCCCccccccHHHHHHHHHHhh----ccceEEEEEcccchhhhHHHhhCCCCcccc
Q 014549 139 NVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFF 213 (423)
Q Consensus 139 ~~L~~~nf~~~v~~~~~~-lV~FYapwC~~C~~~~p~~~~~A~~l~----~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~ 213 (423)
..|+.++|+.+...++++ +|.||+|||++|+++.|.|+++++.+. +.+.++.|||+ ....+|++|+
T Consensus 119 ~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~---~~~~l~~~~~------ 189 (226)
T 1a8l_A 119 TNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAI---EYPEWADQYN------ 189 (226)
T ss_dssp CCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGG---GCHHHHHHTT------
T ss_pred CCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEcc---cCHHHHHhCC------
Confidence 557888888777666666 999999999999999999999999998 57899999999 4556999999
Q ss_pred ccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|.. ...|.|.++.+.|.+|+.+.
T Consensus 190 v~~~Pt~~~~~~G~~----~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 190 VMAVPKIVIQVNGED----RVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp CCSSCEEEEEETTEE----EEEEESCCCHHHHHHHHHHH
T ss_pred CcccCeEEEEeCCce----eEEEcCCCCHHHHHHHHHHh
Confidence 999999999998865 45788999999999999875
No 112
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.57 E-value=1.9e-15 Score=128.58 Aligned_cols=106 Identities=10% Similarity=0.135 Sum_probs=88.6
Q ss_pred eeeEec-cCCccccc----CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 137 AFNVVT-SEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 137 ~v~~L~-~~nf~~~v----~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
.+++++ .++|++.+ ..+++++|.||++||++|+.+.|.|+++++.+. .+.+..|||+ ....++++|+
T Consensus 25 ~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~v~~~---~~~~~~~~~~---- 96 (139)
T 3d22_A 25 NVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-SLMFLVIDVD---ELSDFSASWE---- 96 (139)
T ss_dssp TCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT---TSHHHHHHTT----
T ss_pred cEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CCEEEEEeCc---ccHHHHHHcC----
Confidence 356665 68899887 358899999999999999999999999999884 5899999999 4556999999
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCC
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLP 257 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p 257 (423)
|.++||+++|.+|+. ...+.|. +.++|.+++.+.+..+|
T Consensus 97 --v~~~Pt~~~~~~G~~----~~~~~G~-~~~~l~~~l~~~~~~~~ 135 (139)
T 3d22_A 97 --IKATPTFFFLRDGQQ----VDKLVGA-NKPELHKKITAILDSLP 135 (139)
T ss_dssp --CCEESEEEEEETTEE----EEEEESC-CHHHHHHHHHHHHHTSC
T ss_pred --CCcccEEEEEcCCeE----EEEEeCC-CHHHHHHHHHHHhccCC
Confidence 999999999987765 3467788 88999999988754443
No 113
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=2.8e-15 Score=127.54 Aligned_cols=102 Identities=10% Similarity=0.149 Sum_probs=84.1
Q ss_pred CcceeeEeccCCcccccCC---CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCc
Q 014549 134 SVHAFNVVTSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQ 210 (423)
Q Consensus 134 ~~~~v~~L~~~nf~~~v~~---~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~ 210 (423)
....|.+|+.++|.+.|.. +++++|.||||||++|+.+.|.|+++|+.+. .+.|+.||++++. ++|+
T Consensus 8 ~~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~~------~~~~--- 77 (135)
T 2dbc_A 8 KFGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSCI------EHYH--- 77 (135)
T ss_dssp CCCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSSC------SSCC---
T ss_pred CCCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcCc------ccCC---
Confidence 3445788999999988743 3689999999999999999999999999874 5899999999442 5667
Q ss_pred cccccCccEEEEeCCCCCCCCCcccccCCC-------CHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAFPPGCKSSDCMTRFEGEL-------SVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~-------~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.|.. +.+.|..++.+.
T Consensus 78 ---i~~~Pt~~~~~~G~~----v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 78 ---DNCLPTIFVYKNGQI----EGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp ---SSCCSEEEEESSSSC----SEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred ---CCCCCEEEEEECCEE----EEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 999999999998876 34566654 788999999876
No 114
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.56 E-value=2.8e-15 Score=123.27 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=86.2
Q ss_pred eeeEe-ccCCcccccCC----CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 137 AFNVV-TSEDFPSIFHD----SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 137 ~v~~L-~~~nf~~~v~~----~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
.|+++ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+. .+.+..||++ ....++++++
T Consensus 7 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~---~~~~~~~~~~---- 78 (118)
T 2vm1_A 7 AVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVD---ELKDVAEAYN---- 78 (118)
T ss_dssp CEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETT---TSHHHHHHTT----
T ss_pred ceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEcc---cCHHHHHHcC----
Confidence 36777 46889988843 8999999999999999999999999999886 5899999999 4456999999
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|++|+. ...+.| .+.+.|.+++.+.
T Consensus 79 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 79 --VEAMPTFLFIKDGEK----VDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp --CCSBSEEEEEETTEE----EEEEES-CCHHHHHHHHHHH
T ss_pred --CCcCcEEEEEeCCeE----EEEecC-CCHHHHHHHHHHH
Confidence 999999999988765 346678 5889999999877
No 115
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.56 E-value=7.7e-16 Score=155.99 Aligned_cols=106 Identities=21% Similarity=0.351 Sum_probs=87.1
Q ss_pred cceeeEeccCCcccccCC--CCcEEEEEecCCCccccccHHHHHHHHHHhh---c-----cceEEEEEcccchhhhHHHh
Q 014549 135 VHAFNVVTSEDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLE---G-----IANTGMVELGDIRLATHLAE 204 (423)
Q Consensus 135 ~~~v~~L~~~nf~~~v~~--~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~---~-----~~~~~~Vdc~~~~~~~~l~~ 204 (423)
.+.|++||.++|++.+.+ .++++|.||||||++|+.+.|.|+++++.+. + .+.|++|||+ ...++|+
T Consensus 22 ~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d---~~~~la~ 98 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA---SEVDLCR 98 (470)
T ss_dssp CTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT---TCHHHHH
T ss_pred CCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC---CCHHHHH
Confidence 345899999999999854 4799999999999999999999999999987 3 5899999999 4456999
Q ss_pred hCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+|+ |.++||+++|.+|+.. .+..|.|.++.+.| .|+.+.
T Consensus 99 ~y~------V~~~PTlilf~~gg~~--~~~~y~G~r~~e~L-~fI~k~ 137 (470)
T 3qcp_A 99 KYD------INFVPRLFFFYPRDSC--RSNEECGTSSLEHV-AFENSH 137 (470)
T ss_dssp HTT------CCSSCEEEEEEESSCC--CTTSCCCCCCEEEE-ECSCTT
T ss_pred HcC------CCccCeEEEEECCCce--EEEEeeCCCCHHHH-HHHHHh
Confidence 999 9999999999766531 24578888777665 555433
No 116
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.56 E-value=2.1e-15 Score=129.58 Aligned_cols=102 Identities=10% Similarity=0.089 Sum_probs=80.8
Q ss_pred ccCCccccc-C-CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccE
Q 014549 142 TSEDFPSIF-H-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPS 219 (423)
Q Consensus 142 ~~~nf~~~v-~-~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pt 219 (423)
+.++|++.+ + ++++++|.||||||++|+.+.|.++++++++++.+.|+.||++++ .+++++++ |+++||
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~~---~~~~~~~~------i~~~Pt 80 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITEV---PDFNKMYE------LYDPCT 80 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTTC---CTTTTSSC------SCSSCE
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEccccC---HHHHHHcC------CCCCCE
Confidence 456788666 4 689999999999999999999999999999988899999999954 45899999 999999
Q ss_pred EEEeCCCCCCC-----CCcccccCCC-CHHHHHHHHHHh
Q 014549 220 LVAFPPGCKSS-----DCMTRFEGEL-SVDAVTDWFATA 252 (423)
Q Consensus 220 i~~f~~g~~~~-----~~~~~y~G~~-~~~~l~~fi~~~ 252 (423)
+++|.+|+... .......|.. +.+.|.+++.+.
T Consensus 81 ~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 81 VMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp EEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred EEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 99999886520 0001244555 378888888765
No 117
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.56 E-value=6.8e-16 Score=120.97 Aligned_cols=63 Identities=11% Similarity=0.094 Sum_probs=56.4
Q ss_pred CCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC----hHHHHHHHHHHHHHcCChhhHhh
Q 014549 33 RSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP----STADFLKIQYAYELLTDPLWKRN 95 (423)
Q Consensus 33 ~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~----~~~~f~~i~~Ay~~L~~~~~r~~ 95 (423)
.+...++|+||||+++|+.+|||+|||+|+++||||++++ +.++|++|++||++|+|...|..
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccccc
Confidence 3456789999999999999999999999999999999985 46789999999999999877733
No 118
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.56 E-value=1.5e-15 Score=124.01 Aligned_cols=101 Identities=13% Similarity=0.160 Sum_probs=85.8
Q ss_pred eeeEe-ccCCcccccC----CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 137 AFNVV-TSEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 137 ~v~~L-~~~nf~~~v~----~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
.|+++ +.++|++.+. ++++++|.||++||++|+.+.|.++++++.+. .+.+..||++ ....++++++
T Consensus 5 ~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~---~~~~~~~~~~---- 76 (113)
T 1ti3_A 5 QVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD---ELKAVAEEWN---- 76 (113)
T ss_dssp CEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT---TCHHHHHHHH----
T ss_pred ceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc---ccHHHHHhCC----
Confidence 46777 5688998884 48999999999999999999999999999886 5899999999 4456999999
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|+. ...+.| .+.+.|.+++.+.
T Consensus 77 --v~~~Pt~~~~~~G~~----~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 77 --VEAMPTFIFLKDGKL----VDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp --CSSTTEEEEEETTEE----EEEEEC-CCTTHHHHHHHHH
T ss_pred --CCcccEEEEEeCCEE----EEEEec-CCHHHHHHHHHHh
Confidence 999999999988765 345678 5888999999876
No 119
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.55 E-value=1.6e-15 Score=134.42 Aligned_cols=66 Identities=15% Similarity=0.269 Sum_probs=58.2
Q ss_pred CCcccccccccccCCCC--HHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhHhhhhhc
Q 014549 34 SFPPSHYDALGIKPYSS--VEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDVY 99 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~a~--~~~ik~ayr~l~~~~hPd~~~~--------~~~~f~~i~~Ay~~L~~~~~r~~yd~~ 99 (423)
|...|||++|||+++++ ..+||+|||+++++||||++++ +.++|..|++||++|+||.+|..||..
T Consensus 1 s~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 1 SNAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp ---CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 45679999999999988 9999999999999999999863 346799999999999999999999973
No 120
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.55 E-value=2.9e-15 Score=127.09 Aligned_cols=101 Identities=10% Similarity=0.190 Sum_probs=84.9
Q ss_pred ceeeEecc-CCcccccCC--CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTS-EDFPSIFHD--SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~-~nf~~~v~~--~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
+.|++++. ++|++++.+ +++++|.||++||++|+.+.|.|+++++.+ .+.++.||++ ....++++|+
T Consensus 20 ~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~---~~~~l~~~~~----- 89 (133)
T 3cxg_A 20 SIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD---IHPKLNDQHN----- 89 (133)
T ss_dssp EEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT---TCHHHHHHTT-----
T ss_pred ccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc---chHHHHHhcC-----
Confidence 45788886 788888844 579999999999999999999999998776 4799999999 4456999999
Q ss_pred cccCccEEEEeC--CCC--CCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFP--PGC--KSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~--~g~--~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+++||+++|. +|+ . ...+.|. +.++|.+++.+.
T Consensus 90 -v~~~Pt~~~~~~~~g~g~~----~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 90 -IKALPTFEFYFNLNNEWVL----VHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp -CCSSSEEEEEEEETTEEEE----EEEEESC-CHHHHHHHHHHH
T ss_pred -CCCCCEEEEEEecCCCeEE----EEEEcCC-CHHHHHHHHHHH
Confidence 99999999996 665 3 3467787 899999999877
No 121
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.55 E-value=2e-15 Score=118.71 Aligned_cols=65 Identities=15% Similarity=0.230 Sum_probs=53.5
Q ss_pred HHHHHhhcCCCCcccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCC
Q 014549 24 LFYQLVVLPRSFPPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTD 89 (423)
Q Consensus 24 ~~~~~~~~~~~~~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~------~~~~f~~i~~Ay~~L~~ 89 (423)
+|..+..+...+ .++|++|||++.|+..+||+|||+++++||||++++ +.++|+.|++||++|.+
T Consensus 21 lL~~l~~~L~~~-~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 21 LLSTMHTVLWAG-ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp HHHHGGGTSCTT-CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccc-ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 333444444332 589999999999999999999999999999999874 46689999999999974
No 122
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.54 E-value=8.2e-15 Score=151.47 Aligned_cols=104 Identities=16% Similarity=0.269 Sum_probs=89.8
Q ss_pred ceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhh-c--cceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-G--IANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~-~--~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
+.|..|+.++|+..+ +++++++|.||||||++|+.+.|.|+++++.+. + .+.++.|||+.+. +.+ ++
T Consensus 358 ~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~----~~~-~~---- 428 (504)
T 2b5e_A 358 SSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTEND----VRG-VV---- 428 (504)
T ss_dssp CSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGGGCC----CSS-CC----
T ss_pred ccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCCccc----ccc-CC----
Confidence 568999999999887 678999999999999999999999999999987 3 5799999999553 223 67
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+++||+++|++|... .+..|.|.++.++|.+|+.+.
T Consensus 429 --v~~~Pt~~~~~~G~~~--~~~~~~G~~~~~~l~~~i~~~ 465 (504)
T 2b5e_A 429 --IEGYPTIVLYPGGKKS--ESVVYQGSRSLDSLFDFIKEN 465 (504)
T ss_dssp --CSSSSEEEEECCTTSC--CCCBCCSCCCHHHHHHHHHHH
T ss_pred --ceecCeEEEEeCCcee--cceEecCCCCHHHHHHHHHhc
Confidence 9999999999888641 245899999999999999987
No 123
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.54 E-value=3.4e-15 Score=123.84 Aligned_cols=100 Identities=12% Similarity=0.074 Sum_probs=83.8
Q ss_pred eeEe--ccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 138 FNVV--TSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 138 v~~L--~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
|..+ +.++|++.+ +++++++|.||++||++|+.+.|.|+++++.+ +.+.|+.|||++ ...++++++ |
T Consensus 5 v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~v~~~~vd~~~---~~~~~~~~~------i 74 (118)
T 2f51_A 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KDVTFIKVDVDK---NGNAADAYG------V 74 (118)
T ss_dssp SEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT---CHHHHHHTT------C
T ss_pred ceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CCeEEEEEECCC---CHHHHHhcC------C
Confidence 5667 567888555 67899999999999999999999999999998 678999999994 456999999 9
Q ss_pred cCccEEEEeCC----CCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 215 RGLPSLVAFPP----GCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f~~----g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.++||+++|.+ |.. ...+.|..+ ++|.+.+.+.
T Consensus 75 ~~~Pt~~~~~~~~~~G~~----~~~~~G~~~-~~l~~~~~~~ 111 (118)
T 2f51_A 75 SSIPALFFVKKEGNEIKT----LDQFVGADV-SRIKADIEKF 111 (118)
T ss_dssp CSSSEEEEEEEETTEEEE----EEEEESCCH-HHHHHHHHHH
T ss_pred CCCCEEEEEeCCCCcceE----EEeecCCCH-HHHHHHHHHh
Confidence 99999999987 544 346778764 5699888877
No 124
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.53 E-value=5.9e-16 Score=150.67 Aligned_cols=67 Identities=24% Similarity=0.442 Sum_probs=0.0
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--ChHHHHHHHHHHHHHcCChhhHhhhhhcCCc
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--PSTADFLKIQYAYELLTDPLWKRNYDVYGID 102 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~ 102 (423)
..|||++|||+++|+.+|||+|||+|+++||||+++ .+.++|++|++||++|+||.+|+.||.++..
T Consensus 27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 479999999999999999999999999999999886 4678899999999999999999999998543
No 125
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.53 E-value=1.1e-14 Score=149.68 Aligned_cols=105 Identities=18% Similarity=0.297 Sum_probs=93.1
Q ss_pred ceeeEeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhc--cceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 136 HAFNVVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 136 ~~v~~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~--~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
..|..++.++|++.+ +++++++|+||||||++|+++.|.|+++++.+++ .+.++.||++.+ +++++++
T Consensus 352 ~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~~----~~~~~~~----- 422 (481)
T 3f8u_A 352 GPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATAN----DVPSPYE----- 422 (481)
T ss_dssp SSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTSS----CCCTTCC-----
T ss_pred CCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCch----hhHhhCC-----
Confidence 457899999999888 5589999999999999999999999999999987 489999999955 3788888
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|... .+..|.|.++.++|.+|+.+.
T Consensus 423 -v~~~Pt~~~~~~~~~~--~~~~~~G~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 423 -VRGFPTIYFSPANKKL--NPKKYEGGRELSDFISYLQRE 459 (481)
T ss_dssp -CCSSSEEEEECTTCTT--SCEECCSCCSHHHHHHHHHHH
T ss_pred -CcccCEEEEEeCCCeE--eeeEeCCCCCHHHHHHHHHHh
Confidence 9999999999988751 256899999999999999988
No 126
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=9.8e-15 Score=122.46 Aligned_cols=103 Identities=12% Similarity=0.149 Sum_probs=87.5
Q ss_pred eEeccCCccccc----CCCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 139 ~~L~~~nf~~~v----~~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
+.++..+|++.+ .++++++|.||++||++|+.+.|.| +++++.+.+.+.+..|||+.+ ....+|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~---- 83 (130)
T 2kuc_A 9 IAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRHFVNLKMDMEKG-EGVELRKKYG---- 83 (130)
T ss_dssp CCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHHSEEEEECSSST-THHHHHHHTT----
T ss_pred CCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcCeEEEEEecCCc-chHHHHHHcC----
Confidence 567888998877 3688999999999999999999999 888888877788999999842 2456999999
Q ss_pred ccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++||+++| ++|+. ...+.|..+.+.|.+|+.+.
T Consensus 84 --v~~~Pt~~~~d~~G~~----~~~~~G~~~~~~l~~~l~~~ 119 (130)
T 2kuc_A 84 --VHAYPTLLFINSSGEV----VYRLVGAEDAPELLKKVKLG 119 (130)
T ss_dssp --CCSSCEEEEECTTSCE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 9999999999 56654 44678999999999999887
No 127
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.53 E-value=3.8e-15 Score=132.61 Aligned_cols=72 Identities=18% Similarity=0.389 Sum_probs=63.3
Q ss_pred cCCCCcccccccc------cccC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHhhhhh---cC
Q 014549 31 LPRSFPPSHYDAL------GIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKRNYDV---YG 100 (423)
Q Consensus 31 ~~~~~~~d~y~~l------g~~~-~a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~---~~ 100 (423)
+.++...|||++| |+.+ +++..+||+|||+|++++|||+++++.++|..|++||++|+||.+|..||. +|
T Consensus 5 ~~~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~~g 84 (181)
T 3uo3_A 5 VQRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLKLLRN 84 (181)
T ss_dssp --CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHHHHHC
T ss_pred cCCCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHHHHhC
Confidence 3566788999999 4654 899999999999999999999998788899999999999999999999997 55
Q ss_pred Cc
Q 014549 101 ID 102 (423)
Q Consensus 101 ~~ 102 (423)
..
T Consensus 85 ~~ 86 (181)
T 3uo3_A 85 ID 86 (181)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 128
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.51 E-value=7.1e-15 Score=129.88 Aligned_cols=62 Identities=11% Similarity=0.286 Sum_probs=57.6
Q ss_pred cccccccccCCC--CHHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhHhhhhhc
Q 014549 38 SHYDALGIKPYS--SVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDVY 99 (423)
Q Consensus 38 d~y~~lg~~~~a--~~~~ik~ayr~l~~~~hPd~~~~--------~~~~f~~i~~Ay~~L~~~~~r~~yd~~ 99 (423)
|||++|||++++ +..+||++||+|+++||||++++ +.++|..|++||++|+||.+|..||..
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 73 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS 73 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 899999999999 99999999999999999999873 235799999999999999999999986
No 129
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.50 E-value=4.1e-15 Score=112.03 Aligned_cols=58 Identities=16% Similarity=0.068 Sum_probs=53.1
Q ss_pred cccccccccccC-CCCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCChhhHh
Q 014549 36 PPSHYDALGIKP-YSSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTDPLWKR 94 (423)
Q Consensus 36 ~~d~y~~lg~~~-~a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~~~~r~ 94 (423)
..++|++|||++ +++.++||+|||+|++++|||++ ++.++|++|++||++|+++..|+
T Consensus 13 ~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~-g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 13 SKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp HHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT-CCHHHHHHHHHHHHHHHHHCCCC
T ss_pred HHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 468999999998 79999999999999999999996 67889999999999999887653
No 130
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.50 E-value=1.1e-14 Score=132.32 Aligned_cols=65 Identities=12% Similarity=0.129 Sum_probs=58.0
Q ss_pred CCcccccccccccCC--CCHHHHHHHHHHHHHhcCCCCCCC--------hHHHHHHHHHHHHHcCChhhHhhhhh
Q 014549 34 SFPPSHYDALGIKPY--SSVEQVKEAYEKFSSKWNSGEEIP--------STADFLKIQYAYELLTDPLWKRNYDV 98 (423)
Q Consensus 34 ~~~~d~y~~lg~~~~--a~~~~ik~ayr~l~~~~hPd~~~~--------~~~~f~~i~~Ay~~L~~~~~r~~yd~ 98 (423)
....|||++|||+++ ++..+||++||+|++++|||++++ +.++|..|++||++|+||.+|..||.
T Consensus 40 ~~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 40 DPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp CTTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 346799999999986 789999999999999999999863 23569999999999999999999995
No 131
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.50 E-value=8.4e-15 Score=129.36 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=56.1
Q ss_pred ccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhHhhh
Q 014549 37 PSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNY 96 (423)
Q Consensus 37 ~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~------~~~~f~~i~~Ay~~L~~~~~r~~y 96 (423)
.|+|++|||++.|+.++||+|||+++++||||++++ +.++|++|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 699999999999999999999999999999999863 467899999999999999999876
No 132
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.49 E-value=4.4e-15 Score=124.38 Aligned_cols=102 Identities=13% Similarity=0.184 Sum_probs=85.7
Q ss_pred eeeEec-cCCcccccC----CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcc
Q 014549 137 AFNVVT-SEDFPSIFH----DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQI 211 (423)
Q Consensus 137 ~v~~L~-~~nf~~~v~----~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~ 211 (423)
.+.+++ .++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. .+.+..|||++ ...++++++
T Consensus 15 ~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~~---~~~~~~~~~---- 86 (130)
T 1wmj_A 15 VVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVDE---LKEVAEKYN---- 86 (130)
T ss_dssp SSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTTT---SGGGHHHHT----
T ss_pred ceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEeccc---hHHHHHHcC----
Confidence 356674 578988883 48899999999999999999999999999986 58999999994 455999999
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
|.++||+++|.+|+. ...+.| .+.+.|.+++.+.+
T Consensus 87 --v~~~Pt~~~~~~g~~----~~~~~g-~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 87 --VEAMPTFLFIKDGAE----ADKVVG-ARKDDLQNTIVKHV 121 (130)
T ss_dssp --CCSSCCCCBCTTTTC----CBCCCT-TCTTTHHHHHHHHT
T ss_pred --CCccceEEEEeCCeE----EEEEeC-CCHHHHHHHHHHHH
Confidence 999999999988865 346778 57889999998873
No 133
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.48 E-value=3e-14 Score=120.71 Aligned_cols=102 Identities=16% Similarity=0.257 Sum_probs=83.4
Q ss_pred ccCCcccccC--CCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcccc-hhhhHHHhhCCCCcccccc
Q 014549 142 TSEDFPSIFH--DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDI-RLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 142 ~~~nf~~~v~--~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~-~~~~~l~~~~~~~~~~~i~ 215 (423)
+.++|+..+. .+++++|.||++||++|+.+.|.+ +++++.+.+ +.+..|||+.+ .....++++|+ |.
T Consensus 18 ~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~~-~~~~~vd~~~~~~~~~~l~~~~~------v~ 90 (134)
T 2fwh_A 18 TVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALAD-TVLLQANVTANDAQDVALLKHLN------VL 90 (134)
T ss_dssp SHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTTT-SEEEEEECTTCCHHHHHHHHHTT------CC
T ss_pred CHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-cEEEEEeCCCCcchHHHHHHHcC------CC
Confidence 4456766663 378999999999999999999999 999999876 89999999532 24677999999 99
Q ss_pred CccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 216 GLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
++||+++| ++|+.. ....+.|..+.+.|.+++.+.
T Consensus 91 ~~Pt~~~~d~~G~~v--~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 91 GLPTILFFDGQGQEH--PQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp SSSEEEEECTTSCBC--GGGCBCSCCCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCEe--eeeeeeeccCHHHHHHHHHhc
Confidence 99999999 777541 004688999999999999776
No 134
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.48 E-value=7.2e-15 Score=135.36 Aligned_cols=101 Identities=17% Similarity=0.275 Sum_probs=84.7
Q ss_pred eeeEe-ccCCcccccCC---CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 137 AFNVV-TSEDFPSIFHD---SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 137 ~v~~L-~~~nf~~~v~~---~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
.|.+| +.++|.+.|.+ +++++|.||+|||++|+.+.|.|+++|+.+. .+.|++|||+ + +.++++|+
T Consensus 100 ~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~-~---~~l~~~~~----- 169 (217)
T 2trc_P 100 FVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS-N---TGAGDRFS----- 169 (217)
T ss_dssp SEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH-H---HTCSTTSC-----
T ss_pred eEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC-c---HHHHHHCC-----
Confidence 37888 88999988832 3899999999999999999999999999884 6899999998 3 34888898
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCC-------HHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELS-------VDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~-------~~~l~~fi~~~ 252 (423)
|.++||+++|.+|.. ...|.|..+ .++|..|+.+.
T Consensus 170 -i~~~PTl~~~~~G~~----v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 170 -SDVLPTLLVYKGGEL----ISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp -GGGCSEEEEEETTEE----EEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 999999999998865 346667655 48899998765
No 135
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.47 E-value=1.9e-14 Score=134.60 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=84.0
Q ss_pred eeeEe-ccCCcccccC---CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccc
Q 014549 137 AFNVV-TSEDFPSIFH---DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIF 212 (423)
Q Consensus 137 ~v~~L-~~~nf~~~v~---~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~ 212 (423)
.|.+| +.++|.+.|. .+++++|.||||||++|+.+.|.|+++|+.+.+ ++|++||+++ ..++++|+
T Consensus 113 ~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~----~~l~~~~~----- 182 (245)
T 1a0r_P 113 FVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN----TGAGDRFS----- 182 (245)
T ss_dssp SEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH----HCCTTSSC-----
T ss_pred eEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc----HHHHHHCC-----
Confidence 47888 7899998883 378999999999999999999999999999865 8999999983 44888888
Q ss_pred cccCccEEEEeCCCCCCCCCcccccC-------CCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G-------~~~~~~l~~fi~~~ 252 (423)
|.++||+++|.+|.. ...+.| .++.+.|..|+.+.
T Consensus 183 -I~~~PTll~~~~G~~----v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 183 -SDVLPTLLVYKGGEL----LSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp -TTTCSEEEEEETTEE----EEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred -CCCCCEEEEEECCEE----EEEEeCCcccccccccHHHHHHHHHHc
Confidence 999999999998865 223333 25678899998876
No 136
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.47 E-value=8.9e-14 Score=107.35 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=71.6
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCc
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~ 233 (423)
.+.+|.||++||++|+++.|.++++++++.+.+.+..||+++++ +++++++ |.++||+++ +|+.
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~---~~~~~~~------v~~~Pt~~~--~G~~----- 66 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPDAVEVEYINVMENP---QKAMEYG------IMAVPTIVI--NGDV----- 66 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC---CTTTSTT------TCCSSEEEE--TTEE-----
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCCceEEEEEECCCCH---HHHHHCC------CcccCEEEE--CCEE-----
Confidence 46799999999999999999999999999878999999999554 4889998 999999998 5532
Q ss_pred ccccCCCCHHHHHHHHHHh
Q 014549 234 TRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 234 ~~y~G~~~~~~l~~fi~~~ 252 (423)
.+.|..+.+.|.+++.+.
T Consensus 67 -~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 67 -EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp -ECCSSSSSHHHHHHHHHH
T ss_pred -eeecCCCHHHHHHHHHHh
Confidence 688988999999999765
No 137
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.47 E-value=5e-14 Score=119.42 Aligned_cols=101 Identities=15% Similarity=0.204 Sum_probs=88.9
Q ss_pred eeEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC-
Q 014549 138 FNVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG- 216 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~- 216 (423)
|.++|.+||++++++..+++|.||++ |++|+.+.|.++++|++++|.+.|++||.++ +..++++|| |++
T Consensus 8 v~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~---~~~~a~~~g------i~~~ 77 (133)
T 2djk_A 8 IGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGVINFGTIDAKA---FGAHAGNLN------LKTD 77 (133)
T ss_dssp SEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTTSEEEEECTTT---TGGGTTTTT------CCSS
T ss_pred eeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCeEEEEEEchHH---hHHHHHHcC------CCcc
Confidence 67899999998888889999999999 8999999999999999999999999999994 445899999 888
Q ss_pred -ccEEEEeCC--CCCCCCCccccc--CCCCHHHHHHHHHHhh
Q 014549 217 -LPSLVAFPP--GCKSSDCMTRFE--GELSVDAVTDWFATAI 253 (423)
Q Consensus 217 -~Pti~~f~~--g~~~~~~~~~y~--G~~~~~~l~~fi~~~~ 253 (423)
.||+++|.. |... .+. |..+.+.|.+|+.+.+
T Consensus 78 ~iPtl~i~~~~~g~~~-----~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 78 KFPAFAIQEVAKNQKF-----PFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp SSSEEEEECTTTCCBC-----CCCSSSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEEecCcCccc-----CCCCccccCHHHHHHHHHHHH
Confidence 999999997 4432 443 9999999999998873
No 138
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=1.6e-14 Score=117.21 Aligned_cols=55 Identities=9% Similarity=-0.003 Sum_probs=49.8
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCC--C--------hHHHHHHHHHHHHHcCChh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEI--P--------STADFLKIQYAYELLTDPL 91 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~--~--------~~~~f~~i~~Ay~~L~~~~ 91 (423)
..|||++||++. |+..+||+|||++++++|||+++ + +.++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 479999999996 99999999999999999999975 2 3678999999999999985
No 139
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.46 E-value=1.3e-13 Score=106.37 Aligned_cols=81 Identities=11% Similarity=0.032 Sum_probs=71.2
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcc
Q 014549 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (423)
Q Consensus 155 ~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~ 234 (423)
..+|.||++||++|+++.|.++++++++.+.+.+..||++++ .+++++++ |.++||+++ +|+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~---~~~~~~~~------v~~~Pt~~~--~G~~------ 65 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMVD---REKAIEYG------LMAVPAIAI--NGVV------ 65 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTTC---GGGGGGTC------SSCSSEEEE--TTTE------
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCCC---HHHHHhCC------ceeeCEEEE--CCEE------
Confidence 468999999999999999999999999988899999999944 45899999 999999998 5532
Q ss_pred cccCCCCHHHHHHHHHHh
Q 014549 235 RFEGELSVDAVTDWFATA 252 (423)
Q Consensus 235 ~y~G~~~~~~l~~fi~~~ 252 (423)
.+.|..+.+.|.+++.+.
T Consensus 66 ~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 66 RFVGAPSREELFEAINDE 83 (85)
T ss_dssp EEECSSCCHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHHHH
Confidence 688988999999999875
No 140
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.46 E-value=1.3e-13 Score=116.27 Aligned_cols=92 Identities=18% Similarity=0.294 Sum_probs=77.3
Q ss_pred CCCCcEEEEEecCCCccccccHHHHH--HHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc---cCccEEEEe-C
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWK--TIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR---RGLPSLVAF-P 224 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~--~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i---~~~Pti~~f-~ 224 (423)
.++++++|.||++||++|+.+.|.|+ ++++.+.+.+.+..||++.......++++|+ | .++||+++| +
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~------v~~~~~~Pt~~~~d~ 100 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYG------DPIQDGIPAVVVVNS 100 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTT------CGGGGCSSEEEEECT
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhC------CccCCccceEEEECC
Confidence 56899999999999999999999999 9999998889999999932115567999999 8 999999999 7
Q ss_pred CCCCCCCCcccccC-------CCCHHHHHHHHHHh
Q 014549 225 PGCKSSDCMTRFEG-------ELSVDAVTDWFATA 252 (423)
Q Consensus 225 ~g~~~~~~~~~y~G-------~~~~~~l~~fi~~~ 252 (423)
+|+. ...+.| ..+.+.+.+|+.+.
T Consensus 101 ~G~~----~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 101 DGKV----RYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp TSCE----EEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred CCCE----EEEecCCcccccccCCHHHHHHHHHHh
Confidence 7765 345556 57889999998764
No 141
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.46 E-value=5.9e-14 Score=129.64 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=84.7
Q ss_pred eeEeccCCcccccCCCCcE-EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTSEDFPSIFHDSKPW-LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~~nf~~~v~~~~~~-lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
+..|+.++|+.++..+.++ +|.||+|||++|+.+.|.|+++++.+ +.+.++.|||+ ...++|++++ |.+
T Consensus 120 ~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~v~~~~vd~~---~~~~l~~~~~------v~~ 189 (229)
T 2ywm_A 120 KPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DYITSKVIDAS---ENQDLAEQFQ------VVG 189 (229)
T ss_dssp CCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TTEEEEEEEGG---GCHHHHHHTT------CCS
T ss_pred ccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CCeEEEEEECC---CCHHHHHHcC------Ccc
Confidence 4678888998887666666 88999999999999999999999998 57899999999 4556999999 999
Q ss_pred ccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+||+++ +|+. ..|.|.++.+.|.+|+.+.
T Consensus 190 ~Pt~~~--~G~~-----~~~~G~~~~~~l~~~l~~~ 218 (229)
T 2ywm_A 190 VPKIVI--NKGV-----AEFVGAQPENAFLGYIMAV 218 (229)
T ss_dssp SSEEEE--GGGT-----EEEESCCCHHHHHHHHHHH
T ss_pred cCEEEE--CCEE-----EEeeCCCCHHHHHHHHHHH
Confidence 999998 6643 3689999999999999876
No 142
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.44 E-value=4.5e-14 Score=117.83 Aligned_cols=104 Identities=13% Similarity=0.106 Sum_probs=83.0
Q ss_pred eeeEeccCCcccccC--CCCcEEEEEecC-------CCccccccHHHHHHHHHHhhccceEEEEEcccc----hhhhHHH
Q 014549 137 AFNVVTSEDFPSIFH--DSKPWLIQVYSD-------GSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----RLATHLA 203 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~--~~~~~lV~FYap-------wC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~----~~~~~l~ 203 (423)
.|...+.++|++.+. ++++++|.|||+ ||++|+.+.|.++++++.+.+.+.|..||+++. .....++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~ 85 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFR 85 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHH
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHH
Confidence 356678889998884 489999999999 999999999999999999877899999999310 0345689
Q ss_pred hhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 204 ERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 204 ~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
++++ |.++||+++|.++.. ...+.| .+.+.|.+|+.+
T Consensus 86 ~~~~------i~~~Pt~~~~~~~~~----~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 86 KNLK------VTAVPTLLKYGTPQK----LVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHC------CCSSSEEEETTSSCE----EEGGGG-GCHHHHHHHHHC
T ss_pred HHCC------CCeeCEEEEEcCCce----Eecccc-CCHHHHHHHHhc
Confidence 9999 999999999988643 223333 467888888753
No 143
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.44 E-value=6.5e-12 Score=123.94 Aligned_cols=204 Identities=13% Similarity=0.192 Sum_probs=146.3
Q ss_pred ceeeEecc-CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccc
Q 014549 136 HAFNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFR 214 (423)
Q Consensus 136 ~~v~~L~~-~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i 214 (423)
..|.+|++ +++++.++++++++|-|+.+-+..+ ...|.++|+.+ ..+.|+.++- .++|++++ +
T Consensus 17 ~~~~~l~~~~~~~~~~~~~~~~vvgff~~~~~~~---~~~f~~~A~~~-~~~~F~~t~~------~~v~~~~~------v 80 (361)
T 3uem_A 17 EFATTLPDGAAAESLVESSEVAVIGFFKDVESDS---AKQFLQAAEAI-DDIPFGITSN------SDVFSKYQ------L 80 (361)
T ss_dssp SSSEECCSHHHHHHHHHTSSEEEEEECSCTTSHH---HHHHHHHHHHC-SSSCEEEECC------HHHHHHTT------C
T ss_pred ccceecCCHHHHHHHHhcCCcEEEEEEcCCCchH---HHHHHHHHhcC-CCceEEEECc------HHHHHHhC------C
Confidence 34567754 7788888889999999998766654 57999999998 5577775543 34999999 8
Q ss_pred cCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCC-CC--
Q 014549 215 RGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTG-ER-- 291 (423)
Q Consensus 215 ~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~-~~-- 291 (423)
+. |+|++|++-... ...|+|..+.++|.+|+... ..|....++.++ ...+.... ...++++|+.+.+ +|
T Consensus 81 ~~-~~i~lfk~f~~~---~~~~~g~~~~~~i~~fi~~~--~~p~v~~~~~~~-~~~~~~~~-~~~~~v~F~~~~~~~~~~ 152 (361)
T 3uem_A 81 DK-DGVVLFKKFDEG---RNNFEGEVTKENLLDFIKHN--QLPLVIEFTEQT-APKIFGGE-IKTHILLFLPKSVSDYDG 152 (361)
T ss_dssp SS-SEEEEEESSTTS---EEECCSCCCHHHHHHHHHHH--SSCSEEECSTTT-HHHHHSCS-CCEEEEEECCSSSSSHHH
T ss_pred CC-CeEEEEEecCCC---ccccCCcCCHHHHHHHHHHc--CCCcceecCccc-HHHHhcCC-CCcEEEEEEeCCchhHHH
Confidence 77 999999863221 45899999999999999987 356665567655 34444332 1123455555322 22
Q ss_pred CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCC--CCeEEEecCCCcceeEec---CCCChhHHHHHHHhhc
Q 014549 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--APAIVFLKDPGVKPVVYY---GSFNNSRLSEVMEQNK 364 (423)
Q Consensus 292 ~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~--~Ptl~lfk~~~~~~~~y~---g~~~~~~l~~fi~~~~ 364 (423)
..+.++.+|.+|++.+.|+.+.....+...+++.|||.+ +|++++|..++ ....|. |.++.+.|.+|+....
T Consensus 153 ~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~-~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 153 KLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEE-EMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp HHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC---CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCC-cccccCCCccccCHHHHHHHHHHHh
Confidence 346678899999988888888644223578999999987 99999998643 233453 7889999999999864
No 144
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.41 E-value=5.3e-12 Score=124.31 Aligned_cols=204 Identities=10% Similarity=0.131 Sum_probs=143.7
Q ss_pred eeEec-cCCcccccC-CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 138 FNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 138 v~~L~-~~nf~~~v~-~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
+.+|+ .+++++.++ +++.++|.||++||. ...+.|.++|+.+.+.+.||.+++. ++|++++ |+
T Consensus 125 ~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~~~~~A~~~~~~~~f~~~~~~------~~~~~~~------v~ 189 (350)
T 1sji_A 125 VEIINSKLEVQAFERIEDQIKLIGFFKSEES---EYYKAFEEAAEHFQPYIKFFATFDK------GVAKKLS------LK 189 (350)
T ss_dssp EEECCSHHHHHHHHHCCSSCEEEEECSCTTS---HHHHHHHHHHHHTTTTSEEEEECCH------HHHHHHT------CC
T ss_pred ceeccchHHHHHHhccCCCcEEEEEECCCCc---HHHHHHHHHHHhhccCcEEEEECCH------HHHHHcC------CC
Confidence 56775 467888876 778999999999864 5678999999999988999998644 3899999 88
Q ss_pred CccEEEEeCCCCCCCCCcccccCC-CCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCC----
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEGE-LSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE---- 290 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G~-~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~---- 290 (423)
+|++++|+++... +..|+|. ++.++|.+|+.+. ..|....+|.++. ..+..+ +..+..+++|.....
T Consensus 190 -~p~i~~~~~~~~~---~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~~-~~~~~~-~~~~~~~l~f~~~~~~~~~ 261 (350)
T 1sji_A 190 -MNEVDFYEPFMDE---PIAIPDKPYTEEELVEFVKEH--QRPTLRRLRPEDM-FETWED-DLNGIHIVAFAERSDPDGY 261 (350)
T ss_dssp -TTCEEEECTTCSS---CEECSSSSCCHHHHHHHHHHH--CCCSEEECCTTTH-HHHHHS-CSSSEEEEEECCTTSHHHH
T ss_pred -CCcEEEEeCCCCC---ceecCCCCCCHHHHHHHHHHc--CccchhhcChhhH-HHHhcC-CCCCcEEEEEEcCCCccHH
Confidence 9999999985432 5689997 9999999999987 4566666776663 334332 111233334443211
Q ss_pred CCchHHHHHHHhccc--cceEEEEEccccccHHHH----hhcCCC-CCCeEEEecCCCcceeE--e---cCCCChhHHHH
Q 014549 291 RASPFVRQISRNYWA--YASFAFVLWREEESSIWW----NTFEVE-SAPAIVFLKDPGVKPVV--Y---YGSFNNSRLSE 358 (423)
Q Consensus 291 ~~~~~~~~~a~~~~~--~~~f~~v~~~~~~~~~l~----~~f~v~-~~Ptl~lfk~~~~~~~~--y---~g~~~~~~l~~ 358 (423)
.....++.+|.++++ .+.|+.+.... ...++ +.||+. .+|+++++......... + .+.++.+.|.+
T Consensus 262 ~~~~~~~~vA~~~~~~~~~~f~~id~~~--~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 339 (350)
T 1sji_A 262 EFLEILKQVARDNTDNPDLSIVWIDPDD--FPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELED 339 (350)
T ss_dssp HHHHHHHHHHHHGGGCSSCCEEEECGGG--CHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCceEEEEECchh--hHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHH
Confidence 123445668888876 78888875332 24456 789998 48999999753332222 2 24788999999
Q ss_pred HHHhhccc
Q 014549 359 VMEQNKLQ 366 (423)
Q Consensus 359 fi~~~~~~ 366 (423)
|++...-+
T Consensus 340 F~~d~~~G 347 (350)
T 1sji_A 340 WIEDVLSG 347 (350)
T ss_dssp HHHHHHTS
T ss_pred HHHHHhcC
Confidence 99985433
No 145
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.40 E-value=5.7e-12 Score=125.05 Aligned_cols=211 Identities=10% Similarity=0.107 Sum_probs=146.9
Q ss_pred eeEec-cCCcccccC-CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 138 FNVVT-SEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 138 v~~L~-~~nf~~~v~-~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
|..++ .+++++.++ +.++++|-||++||+ ...+.|.++|..+.+.+.||.+++. . ++++++ |+
T Consensus 127 v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~~~F~~~~~~---~---~~~~~~------v~ 191 (367)
T 3us3_A 127 VELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPYIPFFATFDS---K---VAKKLT------LK 191 (367)
T ss_dssp EEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTTSCEEEECCH---H---HHHHHT------CC
T ss_pred cEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCCcEEEEECCH---H---HHHHcC------CC
Confidence 56675 477888887 679999999999865 5688999999999999999998754 3 889998 77
Q ss_pred CccEEEEeCCCCCCCCCcccccC-CCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCC----
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEG-ELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGE---- 290 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G-~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~---- 290 (423)
. |+|++|+++... +..|.| .++.++|.+|+... ..|....+|.++....+. +. ..++.+++|.+...
T Consensus 192 ~-p~i~lf~~~~~~---~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~ 263 (367)
T 3us3_A 192 L-NEIDFYEAFMEE---PVTIPDKPNSEEEIVNFVEEH--RRSTLRKLKPESMYETWE-DD-MDGIHIVAFAEEADPDGY 263 (367)
T ss_dssp T-TCEEEECTTCSS---CEECSSSSCCHHHHHHHHHHT--CSCSEEECCGGGHHHHHH-SC-BTTEEEEEECCTTSHHHH
T ss_pred C-CeEEEEcCCCCC---CeecCCCCCCHHHHHHHHHHc--CccceeecChhhHHHHHh-hc-cCCcEEEEEEcCCChhHH
Confidence 5 999999986432 568999 49999999999987 356655577665333332 21 12234444433211
Q ss_pred CCchHHHHHHHhccc--cceEEEEEcccccc--HHHHhhcCCC-CCCeEEEecCCCcc--eeEec---CCCChhHHHHHH
Q 014549 291 RASPFVRQISRNYWA--YASFAFVLWREEES--SIWWNTFEVE-SAPAIVFLKDPGVK--PVVYY---GSFNNSRLSEVM 360 (423)
Q Consensus 291 ~~~~~~~~~a~~~~~--~~~f~~v~~~~~~~--~~l~~~f~v~-~~Ptl~lfk~~~~~--~~~y~---g~~~~~~l~~fi 360 (423)
.....++.+|.+|++ .+.|+.+...+-.. +.+.+.||+. ..|+++++...... ...+. +.++.+.|.+|+
T Consensus 264 ~~~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~ 343 (367)
T 3us3_A 264 EFLEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWL 343 (367)
T ss_dssp HHHHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHH
Confidence 122345678999987 68888886443211 1124569997 69999999754432 22234 368999999999
Q ss_pred HhhccccCccc
Q 014549 361 EQNKLQELPQL 371 (423)
Q Consensus 361 ~~~~~~~lp~l 371 (423)
+...-..+..-
T Consensus 344 ~~~~~Gkl~p~ 354 (367)
T 3us3_A 344 EDVLEGEINTE 354 (367)
T ss_dssp HHHHHTSSCC-
T ss_pred HHHHcCCcCcc
Confidence 99766655433
No 146
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.39 E-value=6.1e-13 Score=124.54 Aligned_cols=84 Identities=14% Similarity=0.093 Sum_probs=73.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhh----ccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE----GIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~----~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~ 227 (423)
.++++++.||||||++|+++.|.|+++|..+. +.+.++.|||+ ...+++++|+ |.++||+++ +|.
T Consensus 137 ~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~---~~~~~~~~~~------V~~vPt~~i--~G~ 205 (243)
T 2hls_A 137 KGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAY---ENPDIADKYG------VMSVPSIAI--NGY 205 (243)
T ss_dssp CSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETT---TCHHHHHHTT------CCSSSEEEE--TTE
T ss_pred CCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECc---cCHHHHHHcC------CeeeCeEEE--CCE
Confidence 35678999999999999999999999999984 46899999999 4456999999 999999988 664
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHh
Q 014549 228 KSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 228 ~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
. .|.|.++.++|++|+.+.
T Consensus 206 ~------~~~G~~~~~~l~~~l~~~ 224 (243)
T 2hls_A 206 L------VFVGVPYEEDFLDYVKSA 224 (243)
T ss_dssp E------EEESCCCHHHHHHHHHHH
T ss_pred E------EEeCCCCHHHHHHHHHHH
Confidence 3 599999999999999887
No 147
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.38 E-value=9.9e-14 Score=113.02 Aligned_cols=78 Identities=10% Similarity=-0.015 Sum_probs=63.7
Q ss_pred CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc-h--hhhHHHhhCCCCccccccCccEEEEeCCCCCC
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-R--LATHLAERKPIGQIFFRRGLPSLVAFPPGCKS 229 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~-~--~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~ 229 (423)
+++.+|.||||||++|+++.|.|+++++.+. .|||+.+ . ...++|++++ |+++||+++ +|.
T Consensus 12 ~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~------~v~~~~~~~~~~~~~l~~~~~------V~~~PT~~i--~G~-- 75 (106)
T 3kp8_A 12 RQIGGTMYGAYWCPHCQDQKELFGAAFDQVP------YVECSPNGPGTPQAQECTEAG------ITSYPTWII--NGR-- 75 (106)
T ss_dssp HHHTCEEEECTTCHHHHHHHHHHGGGGGGSC------EEESCTTCTTSCCCHHHHHTT------CCSSSEEEE--TTE--
T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHhCC------EEEEecccccchhHHHHHHcC------CeEeCEEEE--CCE--
Confidence 4567899999999999999999999986654 7888722 1 3466999999 999999877 542
Q ss_pred CCCcccccCCCCHHHHHHHHHH
Q 014549 230 SDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 230 ~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
.|.|.++.+.|.+|+.-
T Consensus 76 -----~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 76 -----TYTGVRSLEALAVASGY 92 (106)
T ss_dssp -----EEESCCCHHHHHHHHTC
T ss_pred -----EecCCCCHHHHHHHhCC
Confidence 58999999999999843
No 148
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=99.36 E-value=2.9e-11 Score=113.59 Aligned_cols=211 Identities=13% Similarity=0.195 Sum_probs=146.8
Q ss_pred eeEec-cCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~-~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.+|+ .++++++++++++++|-|+++|| ....+.|.++|+.+.+.+.||.+.- ..++++++ +++
T Consensus 8 v~~l~s~~~~~~~l~~~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~~~F~~~~~------~~v~~~~~------~~~ 72 (252)
T 2h8l_A 8 SVPLRTEEEFKKFISDKDASIVGFFDDSF---SEAHSEFLKAASNLRDNYRFAHTNV------ESLVNEYD------DNG 72 (252)
T ss_dssp EEECCSHHHHHHHHTSSSCEEEEEESCTT---SHHHHHHHHHHHHTTTTSCEEEECC------HHHHHHHC------SSS
T ss_pred ceeecCHHHHHHHhhcCCeEEEEEECCCC---ChHHHHHHHHHHhcccCcEEEEECh------HHHHHHhC------CCC
Confidence 67785 45567778888999999999984 5678899999999998899998853 23888888 777
Q ss_pred ccEEEEeCCCCCC---CCCcccc-cCCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCCC-
Q 014549 217 LPSLVAFPPGCKS---SDCMTRF-EGELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER- 291 (423)
Q Consensus 217 ~Pti~~f~~g~~~---~~~~~~y-~G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~- 291 (423)
|+|++|+++... .+....| .|..+.++|.+|+... .+|....+|.++. ..+ .+.+ .+++++....+.
T Consensus 73 -p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~--~~Plv~e~t~~n~-~~~-~~~~---~~v~~~~~~~~~~ 144 (252)
T 2h8l_A 73 -EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN--IFGICPHMTEDNK-DLI-QGKD---LLIAYYDVDYEKN 144 (252)
T ss_dssp -EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH--SSCSSCEECTTTH-HHH-SSSS---EEEEEECCBTTTB
T ss_pred -CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc--ccCCeeecccccH-hhh-cCCC---eEEEEeecchhhc
Confidence 999999975210 1225689 9999999999999988 3676666777663 333 2222 455555322111
Q ss_pred ------CchHHHHHHHhcccc---ceEEEEEccccccHHHHhhcCC--C--CCCeEEEecCCCcceeEecCCCChhH--H
Q 014549 292 ------ASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEV--E--SAPAIVFLKDPGVKPVVYYGSFNNSR--L 356 (423)
Q Consensus 292 ------~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~l~~~f~v--~--~~Ptl~lfk~~~~~~~~y~g~~~~~~--l 356 (423)
....++.+|.+|++. +.|+.+... +-..+.+.||+ . ..|+|+++.... ....+.++++.+. |
T Consensus 145 ~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~--~~~~~~~~fgl~~~~~~~P~v~i~~~~~-~ky~~~~~~t~~~~~i 221 (252)
T 2h8l_A 145 AKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK--TFSHELSDFGLESTAGEIPVVAIRTAKG-EKFVMQEEFSRDGKAL 221 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT--TTHHHHGGGTCCCCSCSSCEEEEECTTS-CEEECCSCCCTTSHHH
T ss_pred chhHHHHHHHHHHHHHHccccCceEEEEEEchH--HHHHHHHHcCCCCccCCCCEEEEEeCcC-cEecCCcccCcchHHH
Confidence 122345588888876 888888643 22568899999 3 489999985432 3333567788888 9
Q ss_pred HHHHHhhccccC-cccccc
Q 014549 357 SEVMEQNKLQEL-PQLRSV 374 (423)
Q Consensus 357 ~~fi~~~~~~~l-p~l~~~ 374 (423)
.+|++...-..+ |.+.++
T Consensus 222 ~~F~~~~~~Gkl~~~~kSe 240 (252)
T 2h8l_A 222 ERFLQDYFDGNLKRYLKSE 240 (252)
T ss_dssp HHHHHHHHHTCSCCCC---
T ss_pred HHHHHHHHCCCccccccCC
Confidence 999999765555 334333
No 149
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.04 E-value=7.5e-14 Score=117.10 Aligned_cols=99 Identities=16% Similarity=0.143 Sum_probs=79.9
Q ss_pred CcccccCCCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
.+......+++++|.||++||++|+.+.|.+ +++++.+.+.+.+..||++.+ ....++++++ |.++||++
T Consensus 11 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~-~~~~~~~~~~------v~~~Pt~~ 83 (130)
T 2lst_A 11 ALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEARFVVASVSVDTP-EGQELARRYR------VPGTPTFV 83 (130)
Confidence 4444456788999999999999999999999 999998888789999999633 3456899999 99999999
Q ss_pred Ee--CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 222 AF--PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 222 ~f--~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+| .+|... ....+.|..+.+.|.+++.+.
T Consensus 84 ~~d~~~G~~~--~~~~~~G~~~~~~l~~~l~~~ 114 (130)
T 2lst_A 84 FLVPKAGAWE--EVGRLFGSRPRAEFLKELRQV 114 (130)
Confidence 99 445430 013578999999999998776
No 150
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.33 E-value=9.1e-13 Score=116.17 Aligned_cols=104 Identities=12% Similarity=0.114 Sum_probs=81.2
Q ss_pred eEeccCCccccc----CCCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcccchhhh-----------
Q 014549 139 NVVTSEDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLAT----------- 200 (423)
Q Consensus 139 ~~L~~~nf~~~v----~~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~~~~~----------- 200 (423)
..++..+|++.+ ..+++++|.|||+||++|+.+.+.. .++.+.+++.+.+..||++++....
T Consensus 29 ~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~ 108 (172)
T 3f9u_A 29 VHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTE 108 (172)
T ss_dssp CCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEE
T ss_pred cccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhhcchh
Confidence 446677888777 5689999999999999999986666 7777777767899999998543210
Q ss_pred -----------HH-HhhCCCCccccccCccEEEEe-CCCCCCCCCcccccCCCC-HHHHHHHHHHh
Q 014549 201 -----------HL-AERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELS-VDAVTDWFATA 252 (423)
Q Consensus 201 -----------~l-~~~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~-~~~l~~fi~~~ 252 (423)
.+ +++|+ |.++||+++| ++|+. ...+.|..+ .+.+.+|+.+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~------v~~~Pt~~lid~~G~~----~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 109 RTLRTVGDKWSYLQRVKFG------ANAQPFYVLIDNEGNP----LNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp EEEEEHHHHHHHHHHHHHS------CCCSSEEEEECTTSCB----SSCCBCSCCCHHHHHHHHHHH
T ss_pred hhhhhhhhhhhHHHHHHcC------CCCcceEEEECCCCCE----EeeccCCCCCHHHHHHHHHHH
Confidence 01 57777 9999999999 66655 346679888 99999999876
No 151
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.32 E-value=5.8e-13 Score=108.50 Aligned_cols=97 Identities=10% Similarity=0.112 Sum_probs=79.9
Q ss_pred eEec-cCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccC
Q 014549 139 NVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRG 216 (423)
Q Consensus 139 ~~L~-~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~ 216 (423)
..|+ .++|+++++++++++|.|+|.|||.|+.+.|.++++++. +.+.++.||.++++.. .+++++++ |++
T Consensus 9 ~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~------V~h 80 (112)
T 3iv4_A 9 IKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTN------VKH 80 (112)
T ss_dssp EECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHT------CCC
T ss_pred eecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhC------Ccc
Confidence 4554 467999998899999999999999999999999999984 6689999999965432 34899999 995
Q ss_pred -ccEEEEeCCCCCCCCCccccc---CCCCHHHHHHHH
Q 014549 217 -LPSLVAFPPGCKSSDCMTRFE---GELSVDAVTDWF 249 (423)
Q Consensus 217 -~Pti~~f~~g~~~~~~~~~y~---G~~~~~~l~~fi 249 (423)
.||+++|++|+. .++ |..+.++|.+.+
T Consensus 81 ~sPq~il~k~G~~------v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 81 ESPQAFYFVNGEM------VWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp CSSEEEEEETTEE------EEEEEGGGCSHHHHHHHT
T ss_pred CCCeEEEEECCEE------EEEeeccccCHHHHHHhh
Confidence 999999999976 343 677888777653
No 152
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.31 E-value=7.1e-13 Score=109.23 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=68.5
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-----ceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-----ANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-----~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
+....||+|||+||++|+.|.+. ++..++.. +.+.+||.+++. ...++.+++ |.+.|||++|.+|
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~---i~~~~~~~a~~~~~~l~~vdv~~~~-~~~la~~~~------V~g~PT~i~f~~G 86 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAE---IAPQYPLTDEGRAAPVQRLQMRDPL-PPGLELARP------VTFTPTFVLMAGD 86 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHH---TTTTGGGSHHHHHSCEEEEETTSCC-CTTCBCSSC------CCSSSEEEEEETT
T ss_pred cCCCEEEEEECCCCHHHHHHHHH---HHhhHHHhhhcccceEEEEECCCCC-chhHHHHCC------CCCCCEEEEEECC
Confidence 45689999999999999999863 33333332 688999998653 245778888 9999999999988
Q ss_pred CCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 227 CKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 227 ~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+. ..+..|....+.+..|+.+.
T Consensus 87 ~e----v~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 87 VE----SGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp EE----EEEEECCCCHHHHHHHHHHH
T ss_pred EE----EeeecCCCCHHHHHHHHHHH
Confidence 76 46788999999999999776
No 153
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.30 E-value=2.4e-12 Score=97.53 Aligned_cols=73 Identities=18% Similarity=0.215 Sum_probs=62.1
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y 236 (423)
.|.||++||++|+.+.|.++++++.+.+.+.+..|| ..+++++++ |.++||+++ +|+. .+
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~------~~~~~~~~~------v~~~Pt~~~--~G~~------~~ 62 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK------EMDQILEAG------LTALPGLAV--DGEL------KI 62 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC------SHHHHHHHT------CSSSSCEEE--TTEE------EE
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec------CHHHHHHCC------CCcCCEEEE--CCEE------EE
Confidence 589999999999999999999999998778888888 235899999 999999998 6644 34
Q ss_pred cCCC-CHHHHHHHH
Q 014549 237 EGEL-SVDAVTDWF 249 (423)
Q Consensus 237 ~G~~-~~~~l~~fi 249 (423)
.|.. +.+.|.+|+
T Consensus 63 ~G~~~~~~~l~~~l 76 (77)
T 1ilo_A 63 MGRVASKEEIKKIL 76 (77)
T ss_dssp CSSCCCHHHHHHHC
T ss_pred cCCCCCHHHHHHHh
Confidence 4887 899998875
No 154
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.28 E-value=1e-12 Score=115.48 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEe
Q 014549 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAF 223 (423)
Q Consensus 144 ~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f 223 (423)
++|......+++++|.|||+||++|+.+.|.|+++++.....+.|..||++++.. .++..+++. +.++||+++|
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~~d~~~~--~~~~~~~~~----~~~~Pt~~~~ 110 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVNLEDEEE--PKDEDFSPD----GGYIPRILFL 110 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEEEEGGGS--CSCGGGCTT----CSCSSEEEEE
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEEecCCch--HHHHHhccc----CCcCCeEEEE
Confidence 3454455678999999999999999999999999887766667889999984432 156777722 3679999999
Q ss_pred -CCCCCCCCCcccccCC----------CCHHHHHHHHHHh
Q 014549 224 -PPGCKSSDCMTRFEGE----------LSVDAVTDWFATA 252 (423)
Q Consensus 224 -~~g~~~~~~~~~y~G~----------~~~~~l~~fi~~~ 252 (423)
++|+. ...+.|. .+.+.|++++.+.
T Consensus 111 d~~G~~----~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~ 146 (164)
T 1sen_A 111 DPSGKV----HPEIINENGNPSYKYFYVSAEQVVQGMKEA 146 (164)
T ss_dssp CTTSCB----CTTCCCTTSCTTSTTCCCSHHHHHHHHHHH
T ss_pred CCCCCE----EEEEeCCCCccchhcccCCHHHHHHHHHHH
Confidence 67765 2345563 7899999999876
No 155
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.27 E-value=1e-11 Score=107.64 Aligned_cols=97 Identities=18% Similarity=0.190 Sum_probs=78.4
Q ss_pred Cccccc----CCCCcEEEEEe-cCCCccccccHHHH---HHHHHHhhccceEEEEEcccch--------hhhHHHhhCCC
Q 014549 145 DFPSIF----HDSKPWLIQVY-SDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIR--------LATHLAERKPI 208 (423)
Q Consensus 145 nf~~~v----~~~~~~lV~FY-apwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~~--------~~~~l~~~~~~ 208 (423)
++.+.+ ..+++++|.|| ++||++|+.+.|.+ .++++.....+.+..||++++. ....++++|+
T Consensus 35 ~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~- 113 (154)
T 2ju5_A 35 SYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYK- 113 (154)
T ss_dssp CHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTT-
T ss_pred CHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcC-
Confidence 454444 35789999999 99999999999999 7887776666899999998542 3457999999
Q ss_pred CccccccCccEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 014549 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~--~~~~l~~fi~~~ 252 (423)
|.++||+++| ++|+. ...+ |.. +.+.+.+++.+.
T Consensus 114 -----v~~~Pt~~~~d~~G~~----~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 114 -----VTGFPELVFIDAEGKQ----LARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp -----CCSSSEEEEECTTCCE----EEEE-CCCTTCHHHHHHHHHHH
T ss_pred -----CCCCCEEEEEcCCCCE----EEEe-cCCCCCHHHHHHHHHHH
Confidence 9999999999 66655 4456 887 899999999776
No 156
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.24 E-value=2.5e-11 Score=101.61 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=75.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch-------------------hhhHHHhhCCCCccc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-------------------LATHLAERKPIGQIF 212 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~-------------------~~~~l~~~~~~~~~~ 212 (423)
.+++++|.||++||++|+.+.|.++++++++. .+.+..|+++.+. ....++++++
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~----- 96 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYN----- 96 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTT-----
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcC-----
Confidence 56899999999999999999999999999988 7899999998521 1356888888
Q ss_pred cccCccEEEEeC-CCCCCCCCccccc---CCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFP-PGCKSSDCMTRFE---GELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~-~g~~~~~~~~~y~---G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++. +|.. . .+. |..+.+.|.+++.+.
T Consensus 97 -i~~~P~~~lid~~G~i----~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 97 -VPWQPAFVFYRADGTS----T-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp -CCSSSEEEEECTTSCE----E-EECCSSSCCCHHHHHHHHHHC
T ss_pred -CCCCCEEEEECCCCcE----E-EEEcCCCccCHHHHHHHHHHH
Confidence 89999999994 5543 3 688 999999999999765
No 157
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.23 E-value=2.6e-11 Score=102.91 Aligned_cols=103 Identities=15% Similarity=0.111 Sum_probs=81.6
Q ss_pred EeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc-----------------------
Q 014549 140 VVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----------------------- 196 (423)
Q Consensus 140 ~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~----------------------- 196 (423)
.++.+.+....-.+++++|.||++||++|+.+.|.++++++.+.+.+.|..|+++..
T Consensus 16 ~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (148)
T 2b5x_A 16 WLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIF 95 (148)
T ss_dssp EESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEE
T ss_pred cccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceE
Confidence 455555543334578999999999999999999999999999987799999997531
Q ss_pred -hhhhHHHhhCCCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 197 -RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 197 -~~~~~l~~~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.....+++.|+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 96 ~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 143 (148)
T 2b5x_A 96 VDSDHALTDAFE------NEYVPAYYVFDKTGQL----RHFQAGGSGMKMLEKRVNRV 143 (148)
T ss_dssp ECSSCHHHHHTC------CCCSSEEEEECTTCBE----EEEEESCSTTHHHHHHHHHH
T ss_pred ECCchhHHHHhC------CCCCCEEEEECCCCcE----EEEecCCCCHHHHHHHHHHH
Confidence 12356888888 9999999999 55544 34677988999999999876
No 158
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.22 E-value=3.8e-11 Score=100.21 Aligned_cols=90 Identities=14% Similarity=0.009 Sum_probs=74.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc--------------------hhhhHHHhhCCCCcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------------------RLATHLAERKPIGQI 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~--------------------~~~~~l~~~~~~~~~ 211 (423)
.+++++|.||++||++|+.+.|.++++++.+. .+.+..|+++++ .....+++.|+
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 98 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFG---- 98 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTT----
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcC----
Confidence 56899999999999999999999999999988 789999998642 12355788888
Q ss_pred ccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++.+++.. . .+.|..+.+.|.+++.+.
T Consensus 99 --i~~~P~~~~id~~g~i---~-~~~g~~~~~~l~~~l~~~ 133 (136)
T 1zzo_A 99 --VTQQPAYAFVDPHGNV---D-VVRGRMSQDELTRRVTAL 133 (136)
T ss_dssp --CCSSSEEEEECTTCCE---E-EEESCCCHHHHHHHHHHH
T ss_pred --CCCCceEEEECCCCCE---E-EEecCCCHHHHHHHHHHH
Confidence 8999999999544332 3 688999999999999876
No 159
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=99.19 E-value=2.4e-10 Score=107.22 Aligned_cols=205 Identities=14% Similarity=0.116 Sum_probs=140.7
Q ss_pred eeEecc-CCcccccCC-CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 138 FNVVTS-EDFPSIFHD-SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 138 v~~L~~-~nf~~~v~~-~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
|.+|++ +++++.+++ +++|+|-|++++| ....+.|.++|+.+.+.+.||.+.-. +++++++ ++
T Consensus 8 v~~l~s~~~~~~~~~~~~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~~~F~~t~~~------~v~~~~~------v~ 72 (250)
T 3ec3_A 8 SKEILTLKQVQEFLKDGDDVVILGVFQGVG---DPGYLQYQDAANTLREDYKFHHTFST------EIAKFLK------VS 72 (250)
T ss_dssp SEECCCHHHHHHHHHHCSSCEEEEECSCTT---CHHHHHHHHHHHHHTTTCCEEEECCH------HHHHHHT------CC
T ss_pred ceecCCHHHHHHHHhcCCCeEEEEEEcCCC---chHHHHHHHHHHhhhcCcEEEEECcH------HHHHHcC------CC
Confidence 567755 778888877 8999999999985 57889999999999999999987532 3788888 77
Q ss_pred CccEEEEeCCCCC---CCCCccccc--CCCCHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecC-C
Q 014549 216 GLPSLVAFPPGCK---SSDCMTRFE--GELSVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKT-G 289 (423)
Q Consensus 216 ~~Pti~~f~~g~~---~~~~~~~y~--G~~~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~-~ 289 (423)
+ |+|++|+++.. ..+....|. |.++.++|.+|+... .+|....+|.++....+ .+.+ ..++++..+ .
T Consensus 73 ~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~--~~Plv~e~t~~n~~~~~-~~~~---l~~~~~~~d~~ 145 (250)
T 3ec3_A 73 L-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKH--ALPLVGHRKTSNDAKRY-SKRP---LVVVYYSVDFS 145 (250)
T ss_dssp S-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHH--SSCTEEEECTTTHHHHS-CSSS---EEEEEECCCCS
T ss_pred C-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHc--CCCceeecCccchhhhh-ccCc---cEEEEEecccc
Confidence 7 99999997421 011245788 589999999999988 46776667766533323 2222 334444311 1
Q ss_pred CC-------CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCC--C-CeEEEecCCCcceeEec-CCCChhHHHH
Q 014549 290 ER-------ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A-PAIVFLKDPGVKPVVYY-GSFNNSRLSE 358 (423)
Q Consensus 290 ~~-------~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~--~-Ptl~lfk~~~~~~~~y~-g~~~~~~l~~ 358 (423)
+. ....++.+|.+|+ .+.|+.+...+ -....+.||+.. . |.++++... .....+. +.++.+.|.+
T Consensus 146 ~~~~~~~~~~~~~~~~vAk~~k-ki~F~~~d~~~--~~~~l~~fgl~~~~~~p~~~~~~~~-~~ky~~~~~~~t~~~i~~ 221 (250)
T 3ec3_A 146 FDYRTATQFWRNKVLEVAKDFP-EYTFAIADEED--YATEVKDLGLSESGGDVNAAILDES-GKKFAMEPEEFDSDALRE 221 (250)
T ss_dssp TTTHHHHHHHHHHHHHHHTTCT-TSEEEEEETTT--THHHHHHTTCSSCSCSCEEEEECTT-SCEEECCCCSCCHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHhhc-ceeEEEEcHHH--HHHHHHHcCCCccCCCcEEEEEcCC-CceecCCcccCCHHHHHH
Confidence 11 1233456888898 88888875322 245678999974 3 477776533 3333334 6789999999
Q ss_pred HHHhhccccC
Q 014549 359 VMEQNKLQEL 368 (423)
Q Consensus 359 fi~~~~~~~l 368 (423)
|++...-..+
T Consensus 222 Fv~~~~~Gkl 231 (250)
T 3ec3_A 222 FVMAFKKGKL 231 (250)
T ss_dssp HHHHHHTTCC
T ss_pred HHHHHHCCCc
Confidence 9998765544
No 160
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.16 E-value=6.4e-11 Score=100.09 Aligned_cols=88 Identities=9% Similarity=0.126 Sum_probs=73.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhh-ccceEEEEEcccch----------------------hhhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE-GIANTGMVELGDIR----------------------LATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~-~~~~~~~Vdc~~~~----------------------~~~~l~~~~~~ 208 (423)
.+++++|.||++||++|+.+.|.++++++.+. ..+.|..|+++... ....+++.|+
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 111 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYH- 111 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcC-
Confidence 67899999999999999999999999999997 45899999997410 1346889998
Q ss_pred CccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHH
Q 014549 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWF 249 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi 249 (423)
|.++|+++++ ++|.. ...+.|..+.+.|.+++
T Consensus 112 -----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l 144 (145)
T 3erw_A 112 -----IITIPTSFLLNEKGEI----EKTKIGPMTAEQLKEWT 144 (145)
T ss_dssp -----CCEESEEEEECTTCCE----EEEEESCCCHHHHHHHH
T ss_pred -----cCccCeEEEEcCCCcE----EEEEcCCcCHHHHHHhh
Confidence 9999999999 56654 34678999999998876
No 161
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.12 E-value=4.4e-11 Score=103.76 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=76.8
Q ss_pred eEeccCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccc---------------------
Q 014549 139 NVVTSEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------------------- 196 (423)
Q Consensus 139 ~~L~~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~--------------------- 196 (423)
..++.+.+......+++++|.||++||++|+.+.|.+++++++++.. +.|..|+++..
T Consensus 24 ~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (164)
T 2h30_A 24 KTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKL 103 (164)
T ss_dssp EETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTS
T ss_pred CCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcc
Confidence 44555555544446789999999999999999999999999887432 45544443210
Q ss_pred ----hhhhHHHhhCCCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 197 ----RLATHLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 197 ----~~~~~l~~~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.....++++|+ |.++||++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 104 ~~~~d~~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 104 PVVTDNGGTIAQNLN------ISVYPSWALIGKDGDV----QRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CEEECTTCHHHHHTT------CCSSSEEEEECTTSCE----EEEEESCCCHHHHHHHHHCT
T ss_pred eEEEcCchHHHHHcC------CCccceEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 02345888888 9999999999 56654 34677999999999999876
No 162
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.10 E-value=2.1e-11 Score=116.36 Aligned_cols=76 Identities=11% Similarity=-0.010 Sum_probs=61.7
Q ss_pred EEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc---hhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCC
Q 014549 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (423)
Q Consensus 156 ~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~---~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~ 232 (423)
.+|+||||||+||++++|.|+++|+++ ..|||+.. ..++++|++++ |+++||+++ +|+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l------~~Vd~d~~d~~~~~~~la~~~g------I~~vPT~~i--~G~----- 260 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV------PYVECSPNGPGTPQAQECTEAG------ITSYPTWII--NGR----- 260 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS------CEEESCSSCSSSCCCHHHHTTT------CCSTTEEEE--TTE-----
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc------CEEEEeecCchhhHHHHHHHcC------CcccCeEEE--CCE-----
Confidence 469999999999999999999998655 36888732 12577999999 999999655 552
Q ss_pred cccccCCCCHHHHHHHHHHh
Q 014549 233 MTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 233 ~~~y~G~~~~~~l~~fi~~~ 252 (423)
.|.|.++.++|.+|+.-.
T Consensus 261 --~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 261 --TYTGVRSLEALAVASGYP 278 (291)
T ss_dssp --EEESCCCHHHHHHHTCCC
T ss_pred --EecCCCCHHHHHHHHCCC
Confidence 599999999999998543
No 163
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.10 E-value=1.9e-10 Score=99.67 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=73.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-hhHHHhhCCCCc-----------cc------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATHLAERKPIGQ-----------IF------ 212 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-~~~l~~~~~~~~-----------~~------ 212 (423)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.|..|+++++.. .....+++++.. .+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDG 112 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhcc
Confidence 5689999999999999999999999999999876 8999999985332 112222221110 00
Q ss_pred cccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 113 ~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNV----SGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBE----EEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 28899999998 55543 35677999999999999887
No 164
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.09 E-value=2.7e-10 Score=97.69 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=74.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCCC---------------cccc--
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG---------------QIFF-- 213 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~~---------------~~~~-- 213 (423)
.+++++|.||++||++|+...|.++++++.+++. +.|..|+++........++++++. ..|+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNT 102 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCc
Confidence 4689999999999999999999999999998554 799999997443333333333322 1122
Q ss_pred ccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 214 i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 103 v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 103 VGVLPFTVVEAPKCGY----RQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp SCCSSEEEEEETTTTE----EEECCSCCCHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 7899999988 55654 45778999999999999876
No 165
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.08 E-value=6e-11 Score=102.69 Aligned_cols=90 Identities=10% Similarity=0.057 Sum_probs=62.5
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeC-CCCC
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFP-PGCK 228 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~-~g~~ 228 (423)
.+++++||.|||+||++|+.+.|.+.+..+..+- ...|..|+.+.+. .+++.+++ |.++||+++|. +|+.
T Consensus 42 ~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~fv~V~vD~e~--~~~~~~~~------v~~~PT~~f~~~~G~~ 113 (151)
T 3ph9_A 42 KSKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKFIMLNLMHET--TDKNLSPD------GQYVPRIMFVDPSLTV 113 (151)
T ss_dssp HHTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTCEEEEESSCC--SCGGGCTT------CCCSSEEEEECTTSCB
T ss_pred HcCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCeEEEEecCCc--hhhHhhcC------CCCCCEEEEECCCCCE
Confidence 6789999999999999999999999875322111 1356777775321 23567777 89999999998 6654
Q ss_pred CCCCcccccCC----------CCHHHHHHHHHHh
Q 014549 229 SSDCMTRFEGE----------LSVDAVTDWFATA 252 (423)
Q Consensus 229 ~~~~~~~y~G~----------~~~~~l~~fi~~~ 252 (423)
.....|. .+.+.+++.+.+.
T Consensus 114 ----v~~~~G~~~~~~~~~~~~~~~~ll~~~~~a 143 (151)
T 3ph9_A 114 ----RADIAGRYSNRLYTYEPRDLPLLIENMKKA 143 (151)
T ss_dssp ----CTTCCCSCTTSTTCCCGGGHHHHHHHHHHH
T ss_pred ----EEEEeCCcCCcccccchhhHHHHHHHHHHH
Confidence 2344455 3456666666655
No 166
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.07 E-value=3.7e-10 Score=96.66 Aligned_cols=91 Identities=11% Similarity=0.168 Sum_probs=75.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccch-------------------hhhHHHhhCCCCcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR-------------------LATHLAERKPIGQI 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~-------------------~~~~l~~~~~~~~~ 211 (423)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.|..|++++.. ....+++.|+
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 100 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYD---- 100 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcC----
Confidence 4689999999999999999999999999999874 799999987432 0245888888
Q ss_pred ccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 101 --v~~~P~~~lid~~G~i----~~~~~G~~~~~~l~~~l~~l 136 (151)
T 2f9s_A 101 --VSPLPTTFLINPEGKV----VKVVTGTMTESMIHDYMNLI 136 (151)
T ss_dssp --CCSSCEEEEECTTSEE----EEEEESCCCHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCcE----EEEEeCCCCHHHHHHHHHHH
Confidence 9999999999 55544 34677999999999999877
No 167
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.06 E-value=4.2e-10 Score=95.47 Aligned_cols=91 Identities=8% Similarity=-0.045 Sum_probs=71.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-hhH---------------------HHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-ATH---------------------LAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-~~~---------------------l~~~~~~ 208 (423)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.|..|+++.+.. ... +++.|+
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~- 108 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD- 108 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC-
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcC-
Confidence 5689999999999999999999999999999876 8999999984321 111 677777
Q ss_pred CccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|..+.+.+++.+.+.
T Consensus 109 -----i~~~P~~~lid~~G~i----~~~~~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 109 -----IYATPVLYVLDKNKVI----IAKRIGYENLDDFLVQYEKS 144 (148)
T ss_dssp -----CCSSCEEEEECTTCBE----EEESCCGGGHHHHHHHHHHH
T ss_pred -----cCCCCEEEEECCCCcE----EEecCCHHHHHHHHHHHHHH
Confidence 8999999999 55544 34566777777777776554
No 168
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.06 E-value=4e-10 Score=93.78 Aligned_cols=90 Identities=14% Similarity=0.047 Sum_probs=72.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc-------------------------hhhhHHHhhC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI-------------------------RLATHLAERK 206 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~-------------------------~~~~~l~~~~ 206 (423)
.+++++|.||++||++|+...|.++++++.+...+.+..|++... .....+++.|
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETY 100 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHc
Confidence 468999999999999999999999999999766778888864310 0134578888
Q ss_pred CCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 207 ~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+
T Consensus 101 ~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 101 G------VRSYPTQAFIDKEGKL----VKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp T------CCSSSEEEEECTTCCE----EEEEESCCCHHHHHHHHHH
T ss_pred C------cccCCeEEEECCCCcE----EEeecCCCcHHHHHHHHHh
Confidence 8 9999999999 56654 4567899999999998865
No 169
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.04 E-value=2e-10 Score=93.26 Aligned_cols=78 Identities=15% Similarity=0.199 Sum_probs=66.8
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCc
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~ 233 (423)
...++.||+|||+.|+.+.|..+++++++. +.+..||.+++ ++++++|+ ++ +|+|++|.+|+.
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~~--i~~~~vDId~d---~~l~~~yg------v~-VP~l~~~~dG~~----- 91 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKSW--FELEVINIDGN---EHLTRLYN------DR-VPVLFAVNEDKE----- 91 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHSC--CCCEEEETTTC---HHHHHHST------TS-CSEEEETTTTEE-----
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhcC--CeEEEEECCCC---HHHHHHhC------CC-CceEEEEECCEE-----
Confidence 356899999999999999999999998864 88999999944 45889998 87 999999998864
Q ss_pred ccccCCCCHHHHHHHH
Q 014549 234 TRFEGELSVDAVTDWF 249 (423)
Q Consensus 234 ~~y~G~~~~~~l~~fi 249 (423)
.+.|..+.+.|.+|+
T Consensus 92 -v~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 92 -LCHYFLDSDVIGAYL 106 (107)
T ss_dssp -EECSSCCCHHHHHHH
T ss_pred -EEecCCCHHHHHHHh
Confidence 356888889998886
No 170
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.03 E-value=8.3e-10 Score=93.58 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=71.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHh-hcc-ceEEEEEcccchh----------------------hhHHHhhCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l-~~~-~~~~~Vdc~~~~~----------------------~~~l~~~~~ 207 (423)
.+++++|.||++||++|+.+.|.+.++++.+ .+. +.|..|+++.+.. ...+++.|+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 111 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYA 111 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcC
Confidence 5689999999999999999999999999999 665 7899999885321 346889998
Q ss_pred CCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 208 IGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 208 ~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. .+... +.+.+.+++.+.
T Consensus 112 ------v~~~P~~~lid~~G~i------~~~~~-~~~~l~~~l~~l 144 (148)
T 3fkf_A 112 ------ILTLPTNILLSPTGKI------LARDI-QGEALTGKLKEL 144 (148)
T ss_dssp ------CCSSSEEEEECTTSBE------EEESC-CHHHHHHHHHHH
T ss_pred ------CCCcCEEEEECCCCeE------EEecC-CHHHHHHHHHHH
Confidence 9999999999 55543 33333 788888888765
No 171
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.03 E-value=9.5e-10 Score=94.08 Aligned_cols=91 Identities=14% Similarity=0.010 Sum_probs=72.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccch--------------------hhhHHHhhCCCCc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR--------------------LATHLAERKPIGQ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~--------------------~~~~l~~~~~~~~ 210 (423)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.|..|+.+.+. ....+++.|+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFG--- 103 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHT---
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcC---
Confidence 5689999999999999999999999999999875 677666532110 2345888888
Q ss_pred cccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 104 ---i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 104 ---TQVYPTSVLIGKKGEI----LKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp ---CCSSSEEEEECSSSCC----CEEEESSCCHHHHHHHHHHH
T ss_pred ---CCccCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 8999999999 55544 44688999999999999877
No 172
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.02 E-value=1e-09 Score=93.78 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=75.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh--------------------hhHHHhhCCCCc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~--------------------~~~l~~~~~~~~ 210 (423)
.+++++|.||++||++|+.+.|.++++++.+.+. +.|..|+++.+.. ...+++.|+
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 105 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYL--- 105 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTT---
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcC---
Confidence 4689999999999999999999999999998875 7999999985431 125888888
Q ss_pred cccccCccEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++. +|.. ...+.|..+.+.|.+++.+.
T Consensus 106 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 106 ---INGIPRFILLDRDGKI----ISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp ---CCSSCCEEEECTTSCE----EESSCCCTTCHHHHHHHHHH
T ss_pred ---cCCCCEEEEECCCCeE----EEccCCCCCHHHHHHHHHHH
Confidence 99999999997 5544 34566888899999999876
No 173
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.02 E-value=6.1e-11 Score=104.87 Aligned_cols=76 Identities=17% Similarity=0.288 Sum_probs=62.5
Q ss_pred cCCcccccCCCCcEEEEEecCCCccccccHH-HH--HHHHHHhhccceEEEEEcccchhhhHHHhhC--------CCCcc
Q 014549 143 SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSG-AW--KTIAALLEGIANTGMVELGDIRLATHLAERK--------PIGQI 211 (423)
Q Consensus 143 ~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p-~~--~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~--------~~~~~ 211 (423)
.+.|......++++||.||++||++|+.|.| .| .++++.+.+.+.+.+||.+++ +++++.| +
T Consensus 29 ~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~fv~ikVD~de~---~~l~~~y~~~~q~~~g---- 101 (173)
T 3ira_A 29 EEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEAFVSIKVDREER---PDIDNIYMTVCQIILG---- 101 (173)
T ss_dssp HHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHHCEEEEEETTTC---HHHHHHHHHHHHHHHS----
T ss_pred HHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhcCceeeeCCccc---CcHHHHHHHHHHHHcC----
Confidence 4456666678999999999999999999999 44 578888888889999999944 4577777 7
Q ss_pred ccccCccEEEEeCCCC
Q 014549 212 FFRRGLPSLVAFPPGC 227 (423)
Q Consensus 212 ~~i~~~Pti~~f~~g~ 227 (423)
|.++||+++|.+++
T Consensus 102 --v~g~Pt~v~l~~dG 115 (173)
T 3ira_A 102 --RGGWPLNIIMTPGK 115 (173)
T ss_dssp --CCCSSEEEEECTTS
T ss_pred --CCCCcceeeECCCC
Confidence 88999999997443
No 174
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.01 E-value=9e-10 Score=94.44 Aligned_cols=87 Identities=18% Similarity=0.151 Sum_probs=72.6
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc--cc----------------------hhhhHHHhhCCCC
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--DI----------------------RLATHLAERKPIG 209 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~--~~----------------------~~~~~l~~~~~~~ 209 (423)
++++|.||++||++|+...|.+.++++++ .+.|..|+++ +. .....+++.|+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-- 106 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFK-- 106 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSS--
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhC--
Confidence 89999999999999999999999999999 6788999992 10 03456888888
Q ss_pred ccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 QIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 ~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 107 ----v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 107 ----VLGQPWTFVVDREGKV----VALFAGRAGREALLDALLLA 142 (154)
T ss_dssp ----BCSSCEEEEECTTSEE----EEEEESBCCHHHHHHHHHHT
T ss_pred ----CCcccEEEEECCCCCE----EEEEcCCCCHHHHHHHHHhc
Confidence 9999998888 55544 45677999999999999887
No 175
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.00 E-value=1.4e-09 Score=92.98 Aligned_cols=91 Identities=12% Similarity=0.058 Sum_probs=73.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhh-------------------hHHHhhCCCCcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------THLAERKPIGQI 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~-------------------~~l~~~~~~~~~ 211 (423)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.|..|+++.+... ..+++.|+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 102 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYG---- 102 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcC----
Confidence 4679999999999999999999999999999876 78999998844311 15778888
Q ss_pred ccccCccEEEEe-CCCCCCCCCcccccCC--CCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGE--LSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f-~~g~~~~~~~~~y~G~--~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|. .+.+.|.+++.+.
T Consensus 103 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 103 --VKGMPTSFLIDRNGKV----LLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp --CCSSSEEEEECTTSBE----EEEEESCCTTTHHHHHHHHHHH
T ss_pred --CCCCCeEEEECCCCCE----EEEEccCCCcCHHHHHHHHHHH
Confidence 8999998888 55543 3456674 3568999999877
No 176
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.2e-08 Score=101.59 Aligned_cols=202 Identities=12% Similarity=0.123 Sum_probs=119.8
Q ss_pred eeEecc-CCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVTS-EDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~~-~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
|.+++. ++++. +.+++.++|.||+++|.. ..+.|.++|..+.+...|+.+.+. ++++++ +++
T Consensus 120 v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~~~F~~~~~~-------~~~~~~------v~~ 182 (382)
T 2r2j_A 120 IQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDDCAFLSAFGD-------VSKPER------YSG 182 (382)
T ss_dssp CEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTTCEEEEEESC-------C--------------
T ss_pred ceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhccceEEEEehh-------hHHhhC------CCC
Confidence 455643 46777 677889999999988654 467899999999998899988874 566677 889
Q ss_pred ccEEEEeCCCCCCCCCcccccCCC-CHHHHHHHHHHhhccCCceeecccchhhhhhhhhcCCCceEEEEEecCCCC-Cch
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEGEL-SVDAVTDWFATAILKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER-ASP 294 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G~~-~~~~l~~fi~~~~~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~-~~~ 294 (423)
+| +++++.+.. .....|.|.+ +.++|.+|+... ..|....+|.++ ...+.... ..++++|+...... ...
T Consensus 183 ~p-i~~~~~~~~--~~~~~y~g~~~~~~~l~~fi~~~--~~p~v~elt~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~ 254 (382)
T 2r2j_A 183 DN-IIYKPPGHS--APDMVYLGAMTNFDVTYNWIQDK--CVPLVREITFEN-GEELTEEG--LPFLILFHMKEDTESLEI 254 (382)
T ss_dssp CE-EEEECSSSS--SCCEECCSCTTCHHHHHHHHHHH--HSCSSEECCHHH-HHHHHTTC--CCEEEEEECTTCCHHHHH
T ss_pred Cc-eEECCCCCC--CcCcccCCCCCCHHHHHHHHHhc--ccCceEecChhh-HHHHhcCC--CcEEEEEecCCchHHHHH
Confidence 99 666655321 1246899998 999999999987 355555566655 33343321 22445555432111 111
Q ss_pred HHH---HHHHhccccceEEEEEccccccHHHHhhcCCC--CCCeEEEecCCCcceeEe---cCCCChhHHHHHHHhhccc
Q 014549 295 FVR---QISRNYWAYASFAFVLWREEESSIWWNTFEVE--SAPAIVFLKDPGVKPVVY---YGSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 295 ~~~---~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~--~~Ptl~lfk~~~~~~~~y---~g~~~~~~l~~fi~~~~~~ 366 (423)
+.. ..+.++++.+.|+.+... ....+++.||++ ..|+|+++..... ..| .+.++.+.|.+|++...-.
T Consensus 255 ~~~~~~~~~~~~~~~i~f~~id~~--~~~~~~~~~gl~~~~~P~i~i~~~~~~--y~~~~~~~~~~~~~i~~F~~d~~~G 330 (382)
T 2r2j_A 255 FQNEVARQLISEKGTINFLHADCD--KFRHPLLHIQKTPADCPVIAIDSFRHM--YVFGDFKDVLIPGKLKQFVFDLHSG 330 (382)
T ss_dssp HHHHHHHHTGGGTTTSEEEEEETT--TTHHHHHHTTCCGGGCSEEEEECSSCE--EECCCSGGGGSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCeeEEEEEchH--HhHHHHHHcCCCccCCCEEEEEcchhc--CCCCccccccCHHHHHHHHHHHHCC
Confidence 212 234466677888888633 235678999997 4899988754221 222 3445678999999987655
Q ss_pred cC
Q 014549 367 EL 368 (423)
Q Consensus 367 ~l 368 (423)
.+
T Consensus 331 kl 332 (382)
T 2r2j_A 331 KL 332 (382)
T ss_dssp TT
T ss_pred Cc
Confidence 55
No 177
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.96 E-value=5.2e-09 Score=98.07 Aligned_cols=128 Identities=14% Similarity=0.143 Sum_probs=98.3
Q ss_pred CCceeecccchhhhhhhhhcCCCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEE
Q 014549 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (423)
Q Consensus 256 ~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~ 335 (423)
.|....+++.+.++.|+... ..++|.||.+.+......+..+|..+++.+.|+.+. ...++++|+++. |+|+
T Consensus 5 gP~v~~l~s~~~~~~~l~~~--~v~vvgff~~~~~~~~~~f~~~A~~lr~~~~F~~~~-----~~~v~~~~~~~~-p~i~ 76 (252)
T 2h8l_A 5 SPASVPLRTEEEFKKFISDK--DASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTN-----VESLVNEYDDNG-EGII 76 (252)
T ss_dssp -CCEEECCSHHHHHHHHTSS--SCEEEEEESCTTSHHHHHHHHHHHHTTTTSCEEEEC-----CHHHHHHHCSSS-EEEE
T ss_pred CCCceeecCHHHHHHHhhcC--CeEEEEEECCCCChHHHHHHHHHHhcccCcEEEEEC-----hHHHHHHhCCCC-CcEE
Confidence 56666677666678888653 236777787543334466777899998999999873 356999999985 9999
Q ss_pred EecC------CCcceeEe-cCCCChhHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEEcc
Q 014549 336 FLKD------PGVKPVVY-YGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGR 404 (423)
Q Consensus 336 lfk~------~~~~~~~y-~g~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~ 404 (423)
+|++ .+..++.| .|+++.+.|.+||..+.+|++++++..+...+. .. ++|++++..
T Consensus 77 ~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~------------~~~v~~~~~ 139 (252)
T 2h8l_A 77 LFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQ-GK------------DLLIAYYDV 139 (252)
T ss_dssp EECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCSSCEECTTTHHHHS-SS------------SEEEEEECC
T ss_pred EEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCCeeecccccHhhhc-CC------------CeEEEEeec
Confidence 9986 24567889 999999999999999999999999999988762 11 488887753
No 178
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.94 E-value=1.1e-09 Score=95.58 Aligned_cols=89 Identities=16% Similarity=0.075 Sum_probs=68.5
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc--------------------hhhhHHHhhCCCCc
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------------------RLATHLAERKPIGQ 210 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~--------------------~~~~~l~~~~~~~~ 210 (423)
..+++++|.||++||++|+.+.|.+++++++ .+.|..|+++++ .....+++.|+
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 122 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLG--- 122 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHT---
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcC---
Confidence 4688999999999999999999999999876 467778875421 12345788888
Q ss_pred cccccCccEE-EEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 IFFRRGLPSL-VAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti-~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+. ++.++|.. ...+.|..+.+.+.+++.+.
T Consensus 123 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 123 ---VYGAPETFLIDGNGII----RYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp ---CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHTTHHH
T ss_pred ---ccccCEEEEECCCCeE----EEEEeCCCCHHHHHHHHHHH
Confidence 8999955 44556654 34677999999999988766
No 179
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.94 E-value=5.9e-09 Score=97.64 Aligned_cols=144 Identities=12% Similarity=0.057 Sum_probs=105.4
Q ss_pred CCceeecccchhhhhhhhh-cCCCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeE
Q 014549 256 LPRIFYYTKESMGKNFLAK-TGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAI 334 (423)
Q Consensus 256 ~p~~~~it~~~~~~~fl~~-~~~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl 334 (423)
.|....+++.+.++.|++. .. .++|.||.+.+......+..+|..+++.+.|+.+. +.+++++|+++. |+|
T Consensus 5 gP~v~~l~s~~~~~~~~~~~~~--v~vVgff~~~~~~~~~~F~~~A~~lr~~~~F~~t~-----~~~v~~~~~v~~-p~i 76 (250)
T 3ec3_A 5 SPPSKEILTLKQVQEFLKDGDD--VVILGVFQGVGDPGYLQYQDAANTLREDYKFHHTF-----STEIAKFLKVSL-GKL 76 (250)
T ss_dssp CCSSEECCCHHHHHHHHHHCSS--CEEEEECSCTTCHHHHHHHHHHHHHTTTCCEEEEC-----CHHHHHHHTCCS-SEE
T ss_pred CCCceecCCHHHHHHHHhcCCC--eEEEEEEcCCCchHHHHHHHHHHhhhcCcEEEEEC-----cHHHHHHcCCCC-CeE
Confidence 5666667765557788765 33 35666777544445566788898998999999873 356889999976 999
Q ss_pred EEecCC------CcceeEec--CCCChhHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEEccC-
Q 014549 335 VFLKDP------GVKPVVYY--GSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILAGRL- 405 (423)
Q Consensus 335 ~lfk~~------~~~~~~y~--g~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~~~~- 405 (423)
++|+++ +..++.|. |.++.+.|.+||..+.+|++++++..+...+. .. + ++|++++..+
T Consensus 77 vlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Plv~e~t~~n~~~~~-~~-------~----~l~~~~~~~d~ 144 (250)
T 3ec3_A 77 VLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPLVGHRKTSNDAKRY-SK-------R----PLVVVYYSVDF 144 (250)
T ss_dssp EEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCTEEEECTTTHHHHS-CS-------S----SEEEEEECCCC
T ss_pred EEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCceeecCccchhhhh-cc-------C----ccEEEEEeccc
Confidence 999863 45678888 47899999999999999999999999987664 11 1 5888887532
Q ss_pred ----ChhhHHHHHHHhhh
Q 014549 406 ----SPELNKMREVSISA 419 (423)
Q Consensus 406 ----~~~~~~~~~~~~~~ 419 (423)
....+++++.++++
T Consensus 145 ~~~~~~~~~~~~~~~~~v 162 (250)
T 3ec3_A 145 SFDYRTATQFWRNKVLEV 162 (250)
T ss_dssp STTTHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHH
Confidence 22345566666554
No 180
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.93 E-value=1.6e-09 Score=92.93 Aligned_cols=89 Identities=11% Similarity=0.097 Sum_probs=69.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch--------------------hhhHHHhhCCCCcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~--------------------~~~~l~~~~~~~~~ 211 (423)
.+++++|.||++||++|+.+.|.++++++. +.+.+..|+++++. ....+++.|+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 114 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWG---- 114 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTT----
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcC----
Confidence 478999999999999999999999999876 55788888764221 2345788888
Q ss_pred ccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|..+.+.|.+++.+.
T Consensus 115 --v~~~P~~~~id~~G~i----~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 115 --VYGVPETFVVGREGTI----VYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp --CCSSCEEEEECTTSBE----EEEEESCCCHHHHHHTHHHH
T ss_pred --cCccCeEEEEcCCCCE----EEEEeCCCCHHHHHHHHHHH
Confidence 8999976666 56654 34577999999999988765
No 181
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.92 E-value=3.7e-09 Score=91.83 Aligned_cols=88 Identities=9% Similarity=0.086 Sum_probs=71.9
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc------------------cchhh--------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------DIRLA-------------- 199 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~------------------~~~~~-------------- 199 (423)
.+++++|.||++||++|+...|.+.++++.+. .+.|..|+++ ++...
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWI 114 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSE
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCee
Confidence 46899999999999999999999999999988 7889999987 22110
Q ss_pred -----hHHHhhCCCCccccccCccEEEEe-CCCCCCCCCcccccCCC-CHHHHHHHHHHh
Q 014549 200 -----THLAERKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL-SVDAVTDWFATA 252 (423)
Q Consensus 200 -----~~l~~~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~-~~~~l~~fi~~~ 252 (423)
..+++.|+ |.++|+++++ ++|.. .+.|.. +.+.|.+++.+.
T Consensus 115 ~~~d~~~~~~~~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~l~~~l~~l 162 (165)
T 3ha9_A 115 MVMDDGSLVEKFN------VRSIDYIVIMDKSSNV------LYAGTTPSLGELESVIKSV 162 (165)
T ss_dssp EEECCSHHHHHTT------CCSSSEEEEEETTCCE------EEEEESCCHHHHHHHHHHC
T ss_pred EEeChHHHHHHhC------CCCceEEEEEcCCCcE------EEeCCCCCHHHHHHHHHHH
Confidence 25778888 9999999999 55544 337888 899999988764
No 182
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=98.92 E-value=2.5e-09 Score=92.17 Aligned_cols=91 Identities=10% Similarity=0.020 Sum_probs=72.1
Q ss_pred CCCcEEEEEecCCCccccc-cHHHHHHHHHHhhcc-ceEEEEEcc-------cch------------------hhhH---
Q 014549 152 DSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-ANTGMVELG-------DIR------------------LATH--- 201 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~-~~p~~~~~A~~l~~~-~~~~~Vdc~-------~~~------------------~~~~--- 201 (423)
.+++++|.||++||++|+. +.|.++++++++.+. +.|..|+++ ... ....
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 108 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQR 108 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCS
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccch
Confidence 4789999999999999999 699999999999875 788888862 000 1112
Q ss_pred ---HHhhCCCCccccccCccEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 202 ---LAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 202 ---l~~~~~~~~~~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+++.|+ |.++|+++++. +|.. ...+.|..+.+.|.+++.+.
T Consensus 109 ~~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 153 (160)
T 3lor_A 109 IPSTMKKYR------LEGTPSIILADRKGRI----RQVQFGQVDDFVLGLLLGSL 153 (160)
T ss_dssp SCHHHHHTT------CCSSSEEEEECTTSBE----EEEEESCCCHHHHHHHHHHH
T ss_pred hhhHHHhcc------cCccceEEEECCCCcE----EEEecCcCCHHHHHHHHHHH
Confidence 777787 89999999995 4543 44667999999999999876
No 183
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.91 E-value=9.9e-10 Score=96.66 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=61.6
Q ss_pred EeccCCccccc-CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCcc
Q 014549 140 VVTSEDFPSIF-HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 140 ~L~~~nf~~~v-~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~P 218 (423)
.++++.+..+- -.+++++|.|||+||++|+.+.|.++++++... .+.|..||.+ ...+++++|. ..++.++|
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d---~~~~~~~~~~---~~~v~~iP 112 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG---RAEDDLRQRL---ALERIAIP 112 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH---HHHHHTTTTT---TCSSCCSS
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC---CCHHHHHHHH---HcCCCCcC
Confidence 34444444332 246789999999999999999999999998764 5889999988 4455777663 11288999
Q ss_pred EEEEeCCCCC
Q 014549 219 SLVAFPPGCK 228 (423)
Q Consensus 219 ti~~f~~g~~ 228 (423)
|+++|.+|..
T Consensus 113 t~i~~~~~G~ 122 (167)
T 1z6n_A 113 LVLVLDEEFN 122 (167)
T ss_dssp EEEEECTTCC
T ss_pred eEEEECCCCC
Confidence 9999998644
No 184
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.91 E-value=3.6e-09 Score=90.67 Aligned_cols=88 Identities=14% Similarity=0.101 Sum_probs=69.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh----------------------hhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~----------------------~~~l~~~~~~ 208 (423)
.+++++|.||++||++|+...|.+.++++.+.+. +.|..|+++++.. ...+++.|+
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~- 106 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYC- 106 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhC-
Confidence 4689999999999999999999999999999876 7999999985321 466889999
Q ss_pred CccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 209 GQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+ .+.+.+.+++.+.
T Consensus 107 -----v~~~P~~~lid~~G~i----~~~~---~~~~~l~~~l~~l 139 (152)
T 2lrn_A 107 -----IVGFPHIILVDPEGKI----VAKE---LRGDDLYNTVEKF 139 (152)
T ss_dssp -----CCSSCEEEEECTTSEE----EEEC---CCTTHHHHHHHHH
T ss_pred -----CCcCCeEEEECCCCeE----EEee---CCHHHHHHHHHHH
Confidence 8999999999 55543 1222 2456677777665
No 185
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.90 E-value=5.2e-09 Score=92.66 Aligned_cols=97 Identities=11% Similarity=0.114 Sum_probs=72.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-c------eEEEEEccc--chhhhHHHhhCCCC------------c
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-A------NTGMVELGD--IRLATHLAERKPIG------------Q 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~------~~~~Vdc~~--~~~~~~l~~~~~~~------------~ 210 (423)
.++++||.||++||++|+...|.+.++++++.+. + .|..|+++. .......++++++. .
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 137 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAA 137 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGG
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHH
Confidence 4689999999999999999999999999999876 7 999999985 22233444544431 0
Q ss_pred ---cccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 ---IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ---~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.+.|.++|+++++ ++|.. ...|.|..+.+.|.+++.+.
T Consensus 138 ~~~~~~v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 138 SLGGVPASVIPTTIVLDKQHRP----AAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp GTTTCCTTCCSEEEEECTTSCE----EEEECSCCCHHHHHHHHHHH
T ss_pred HhccCCCCCCCeEEEECCCCcE----EEEEcCCCCHHHHHHHHHHH
Confidence 1237899976666 55554 34677999999999999876
No 186
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.89 E-value=3.1e-09 Score=90.11 Aligned_cols=71 Identities=10% Similarity=0.030 Sum_probs=59.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhc--cceEEEEEcccch---------------------hhhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIR---------------------LATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~--~~~~~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (423)
.+++++|.||++||++|+.+.|.++++++++.+ .+.|..|+++++. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFD- 105 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcC-
Confidence 467999999999999999999999999999984 5789999988532 1356889998
Q ss_pred CccccccCccEEEEeC--CCCC
Q 014549 209 GQIFFRRGLPSLVAFP--PGCK 228 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f~--~g~~ 228 (423)
|.++||++++. +|..
T Consensus 106 -----v~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 106 -----VKSIPTLVGVEADSGNI 122 (144)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCcE
Confidence 99999999995 5643
No 187
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.89 E-value=8e-10 Score=86.37 Aligned_cols=73 Identities=23% Similarity=0.186 Sum_probs=59.9
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y 236 (423)
++.||+|||+.|+.++|.+++++..+ +.+||.+++ ++++++|+ ++ +||+++ .+|+. ..
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~~~~-----~~~vdid~~---~~l~~~~g------~~-vPtl~~-~~G~~------v~ 60 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQARAGA-----FFSVFIDDD---AALESAYG------LR-VPVLRD-PMGRE------LD 60 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCC-----EEEEECTTC---HHHHHHHT------TT-CSEEEC-TTCCE------EE
T ss_pred EEEEECCCCchHHHHHHHHHHHHHhh-----eEEEECCCC---HHHHHHhC------CC-cCeEEE-ECCEE------Ee
Confidence 68899999999999999998776432 688999954 45999998 88 999988 77754 22
Q ss_pred cCCCCHHHHHHHHHHh
Q 014549 237 EGELSVDAVTDWFATA 252 (423)
Q Consensus 237 ~G~~~~~~l~~fi~~~ 252 (423)
|..+.+.|.+|+.+.
T Consensus 61 -g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 61 -WPFDAPRLRAWLDAA 75 (87)
T ss_dssp -SCCCHHHHHHHHHTC
T ss_pred -CCCCHHHHHHHHHHH
Confidence 888999999999765
No 188
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=98.88 E-value=4.9e-09 Score=90.21 Aligned_cols=92 Identities=15% Similarity=0.017 Sum_probs=72.0
Q ss_pred CCCcEEEEEecCCCcccccc-HHHHHHHHHHhhcc-ceEEEEEccc------c-h------------------hhh----
Q 014549 152 DSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-ANTGMVELGD------I-R------------------LAT---- 200 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~-~p~~~~~A~~l~~~-~~~~~Vdc~~------~-~------------------~~~---- 200 (423)
.+++++|.||++||++|+.. .|.+.++++++.+. +.|..|+++. . . ...
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 106 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAM 106 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSS
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhh
Confidence 46899999999999999996 99999999999854 7888888631 0 0 001
Q ss_pred -HHHhhCCCCccccccCccEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 201 -HLAERKPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 201 -~l~~~~~~~~~~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
.+++.|+ |.++|+++++- +|.. ...+.|..+.+.|.+++.+.+
T Consensus 107 ~~~~~~~~------v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 107 PRTMAAYQ------MRGTPSLLLIDKAGDL----RAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp CHHHHHTT------CCSSSEEEEECTTSEE----EEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHcC------CCCCCEEEEECCCCCE----EEEEeCCCCHHHHHHHHHHHh
Confidence 4778888 99999999984 5543 346679999999999998763
No 189
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.86 E-value=5.3e-09 Score=90.31 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccc----------------hhhhHHHhhCCCCccccc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI----------------RLATHLAERKPIGQIFFR 214 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~----------------~~~~~l~~~~~~~~~~~i 214 (423)
.+++++|.||++||++|+...|.++++++.+.+ .+.|..|+++.. .....+++.|+ |
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~------v 113 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYG------A 113 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTT------C
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhC------C
Confidence 468999999999999999999999999999974 478999998841 11356889999 9
Q ss_pred cCccEEEEe-CCCCCCCCCcccccCC--CCHHHHHHHHHHh
Q 014549 215 RGLPSLVAF-PPGCKSSDCMTRFEGE--LSVDAVTDWFATA 252 (423)
Q Consensus 215 ~~~Pti~~f-~~g~~~~~~~~~y~G~--~~~~~l~~fi~~~ 252 (423)
.++|+++++ ++|.. ...+.|. .+..++++.+.+.
T Consensus 114 ~~~P~~~lid~~G~i----~~~~~G~~~~~~~~~~~~~~~~ 150 (158)
T 3hdc_A 114 NRLPDTFIVDRKGII----RQRVTGGIEWDAPKVVSYLKSL 150 (158)
T ss_dssp CSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTT
T ss_pred CCcceEEEEcCCCCE----EEEEeCCCccchHHHHHHHHhh
Confidence 999998777 45543 3456674 4567777777654
No 190
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.85 E-value=4.5e-09 Score=89.44 Aligned_cols=71 Identities=8% Similarity=0.031 Sum_probs=59.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhh--ccceEEEEEcccch---------------------hhhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~--~~~~~~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (423)
.+++++|.||++||++|+.+.|.++++++++. +.+.|..|+++++. ....++++|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~- 105 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFN- 105 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTT-
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhC-
Confidence 46799999999999999999999999999998 35789999988532 1356889998
Q ss_pred CccccccCccEEEEeC--CCCC
Q 014549 209 GQIFFRRGLPSLVAFP--PGCK 228 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f~--~g~~ 228 (423)
|.++||++++. +|..
T Consensus 106 -----v~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 106 -----VESIPTLIGVDADSGDV 122 (146)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCeE
Confidence 99999999996 5543
No 191
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.84 E-value=1.6e-08 Score=93.17 Aligned_cols=138 Identities=19% Similarity=0.248 Sum_probs=99.8
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCC
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPG 341 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~ 341 (423)
+++.+.++.|+... ..++|.||.+.++...+.+..+|..+ ..+.|+.+. ..+++++|+++. |+|++|+..+
T Consensus 14 l~s~~~~~~~l~~~--~v~vVgff~~~~~~~~~~f~~~A~~l-~~~~F~~t~-----~~~v~~~~~v~~-p~i~lfk~~~ 84 (227)
T 4f9z_D 14 LTDVPAAMEFIAAT--EVAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNITG-NTICLFRLVD 84 (227)
T ss_dssp CCSHHHHHHHHHTS--SEEEEEECSCSCSTHHHHHHHHTTTC-TTSEEEEEC-----CHHHHHHTTCCS-SEEEEEETTT
T ss_pred eCCHHHHHHHHhcC--CeEEEEEecCCCchhHHHHHHHHHhC-CCceEEEEC-----CHHHHHHcCCCC-CeEEEEEecC
Confidence 55544467787643 23556677765556678888888888 478888753 356999999986 9999999877
Q ss_pred cceeEecC----CCChhHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEEE-ccCChhhHHHHHHH
Q 014549 342 VKPVVYYG----SFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVILA-GRLSPELNKMREVS 416 (423)
Q Consensus 342 ~~~~~y~g----~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~~-~~~~~~~~~~~~~~ 416 (423)
..+..|.| +++.+.|.+||..+.+|++++++..+...+. .. +. +++++++ .+...+.+++++.|
T Consensus 85 ~~~~~~~~~~~g~~~~~~l~~fi~~~~~plv~e~t~~n~~~~~-~~------~~----~~~~l~f~~~~~~~~~~~~~~~ 153 (227)
T 4f9z_D 85 NEQLNLEDEDIESIDATKLSRFIEINSLHMVTEYNPVTVIGLF-NS------VI----QIHLLLIMNKASPEYEENMHRY 153 (227)
T ss_dssp TEEEEECHHHHHTCCHHHHHHHHHHHCCCSEEECCHHHHHHHH-HS------SC----CEEEEEEECTTSTTHHHHHHHH
T ss_pred cccccccccccCCCCHHHHHHHHHHhCCCceeecCcccHHHHh-cc------CC----ceEEEEEEcCCcchHHHHHHHH
Confidence 77888884 7899999999999999999999998876653 11 11 3665555 33444556666666
Q ss_pred hhh
Q 014549 417 ISA 419 (423)
Q Consensus 417 ~~~ 419 (423)
+++
T Consensus 154 ~~v 156 (227)
T 4f9z_D 154 QKA 156 (227)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 192
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.83 E-value=6e-09 Score=88.19 Aligned_cols=86 Identities=12% Similarity=0.134 Sum_probs=64.4
Q ss_pred CCcEEEEEecCCCccccccHHHHHH---HHHHhhcc-ceEEEEEcccchhh-h--------------------HHHhhCC
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRLA-T--------------------HLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~---~A~~l~~~-~~~~~Vdc~~~~~~-~--------------------~l~~~~~ 207 (423)
+++++|.||++||++|+...|.+.+ +.+.+++. +.|..|+.+++... . .+++.|+
T Consensus 31 gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 110 (142)
T 3eur_A 31 AEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYD 110 (142)
T ss_dssp CSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSC
T ss_pred CCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcC
Confidence 5899999999999999999999999 99988654 78888988754221 1 1345555
Q ss_pred CCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 014549 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (423)
Q Consensus 208 ~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~ 250 (423)
|.++|+++++.+++.. .+.+ .+.++|.+|+.
T Consensus 111 ------v~~~P~~~lid~~G~i-----~~~~-~~~~~l~~~l~ 141 (142)
T 3eur_A 111 ------LRAIPTLYLLDKNKTV-----LLKD-ATLQKVEQYLA 141 (142)
T ss_dssp ------CTTCSEEEEECTTCBE-----EEEE-ECHHHHHHHHH
T ss_pred ------CCcCCeEEEECCCCcE-----EecC-CCHHHHHHHHh
Confidence 9999999999654442 4443 25788888875
No 193
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.82 E-value=7.2e-09 Score=88.61 Aligned_cols=91 Identities=10% Similarity=0.190 Sum_probs=70.9
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccc-hh-------------------hhHHHhhCCCCc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI-RL-------------------ATHLAERKPIGQ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~-~~-------------------~~~l~~~~~~~~ 210 (423)
.+++++|.||++||++|+...|.+.++++.+.+ .+.|..|+++.+ .. ...+++.|+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--- 103 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYG--- 103 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHT---
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhC---
Confidence 568999999999999999999999999999987 478999998853 11 133777788
Q ss_pred cccccCccEEEEe-CCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 014549 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~--~~~~l~~fi~~~ 252 (423)
|.++|+++++ ++|.. ...+.|.. +.+.+.+++.+.
T Consensus 104 ---v~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 141 (154)
T 3kcm_A 104 ---TTGVPETFVIDRHGVI----LKKVVGAMEWDHPEVIAFLNNE 141 (154)
T ss_dssp ---CCSBCEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHTC
T ss_pred ---CCCCCeEEEECCCCcE----EEEEcCCCccccHHHHHHHHHH
Confidence 8999977666 55544 34566764 677899998765
No 194
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.81 E-value=5.6e-09 Score=88.35 Aligned_cols=71 Identities=10% Similarity=0.117 Sum_probs=59.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhh--ccceEEEEEcccch---------------------hhhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLE--GIANTGMVELGDIR---------------------LATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~--~~~~~~~Vdc~~~~---------------------~~~~l~~~~~~ 208 (423)
.+++++|.||++||++|+.+.|.++++++++. +.+.+..|+++.+. ....+++.|+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 105 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFG- 105 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHT-
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcC-
Confidence 46799999999999999999999999999997 45788889988532 1356888888
Q ss_pred CccccccCccEEEEeC--CCCC
Q 014549 209 GQIFFRRGLPSLVAFP--PGCK 228 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f~--~g~~ 228 (423)
|.++||++++. +|..
T Consensus 106 -----v~~~Pt~~lid~~~G~i 122 (144)
T 1o73_A 106 -----VESIPTLITINADTGAI 122 (144)
T ss_dssp -----CCSSSEEEEEETTTCCE
T ss_pred -----CCCCCEEEEEECCCCeE
Confidence 99999999997 4543
No 195
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.81 E-value=7.9e-09 Score=87.21 Aligned_cols=95 Identities=16% Similarity=0.225 Sum_probs=67.4
Q ss_pred CCCcEEEEEecCCCccccccHHHHHH---HHHHhhcc-ceEEEEEcccchh-hhHHHhhCCCC--------------ccc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKT---IAALLEGI-ANTGMVELGDIRL-ATHLAERKPIG--------------QIF 212 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~---~A~~l~~~-~~~~~Vdc~~~~~-~~~l~~~~~~~--------------~~~ 212 (423)
.+++++|.||++||++|+...|.+.+ +.+.+++. +.|..|+++++.. .....+++++. ..|
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 105 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLY 105 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCS
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHc
Confidence 46899999999999999999999998 88888764 7889998884332 12222222210 133
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+|.++|+++++.+++.. .+ +..+.++|.+++.+.
T Consensus 106 ~v~~~P~~~lid~~G~i-----~~-~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 106 DIRATPTIYLLDGRKRV-----IL-KDTSMEQLIDYLATQ 139 (142)
T ss_dssp CCCSSSEEEEECTTCBE-----EE-CSCCHHHHHHHHHC-
T ss_pred CCCCCCeEEEECCCCCE-----Ee-cCCCHHHHHHHHHHH
Confidence 49999999999544331 33 567899999998754
No 196
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.77 E-value=1.3e-08 Score=87.52 Aligned_cols=89 Identities=12% Similarity=0.001 Sum_probs=69.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhh--------------------hHHHhhCCCCc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA--------------------THLAERKPIGQ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~--------------------~~l~~~~~~~~ 210 (423)
.+++++|.||++||++|+...|.+.++++++.+. +.|..|+++..... ..+++.|+
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--- 110 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYN--- 110 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHT---
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcC---
Confidence 3579999999999999999999999999999876 79999999854321 02677777
Q ss_pred cccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHH
Q 014549 211 IFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFA 250 (423)
Q Consensus 211 ~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~ 250 (423)
|.++|+++++ ++|.. ...+.|..+.++...-..
T Consensus 111 ---v~~~P~~~lid~~G~i----~~~~~g~~~~e~~~~~~~ 144 (152)
T 2lrt_A 111 ---VTNLPSVFLVNRNNEL----SARGENIKDLDEAIKKLL 144 (152)
T ss_dssp ---CCSCSEEEEEETTTEE----EEETTTCSCHHHHHHHHH
T ss_pred ---cccCceEEEECCCCeE----EEecCCHHHHHHHHHHHH
Confidence 8899999999 55654 346678888777655443
No 197
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.74 E-value=1.5e-08 Score=88.59 Aligned_cols=68 Identities=9% Similarity=0.089 Sum_probs=58.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhc--cceEEEEEcccchh---------------------hhHHHhhCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG--IANTGMVELGDIRL---------------------ATHLAERKPI 208 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~--~~~~~~Vdc~~~~~---------------------~~~l~~~~~~ 208 (423)
.++++||.||++||++|+.+.|.++++++.+.+ .+.|..|+++++.. ...+++.|+
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 125 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYS- 125 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTT-
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcC-
Confidence 468999999999999999999999999999985 57888888875421 156889998
Q ss_pred CccccccCccEEEEeCC
Q 014549 209 GQIFFRRGLPSLVAFPP 225 (423)
Q Consensus 209 ~~~~~i~~~Pti~~f~~ 225 (423)
|.++||++++.+
T Consensus 126 -----v~~~Pt~~lid~ 137 (165)
T 3s9f_A 126 -----VESIPTLIGLNA 137 (165)
T ss_dssp -----CCSSSEEEEEET
T ss_pred -----CCCCCEEEEEeC
Confidence 999999999975
No 198
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.72 E-value=2.3e-08 Score=86.47 Aligned_cols=98 Identities=10% Similarity=0.103 Sum_probs=75.1
Q ss_pred CCccccc----CCCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 144 EDFPSIF----HDSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 144 ~nf~~~v----~~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
.+|++.+ ..++++||.||++||..|+.|...- .++++.+.....+.++|.+.. ....++++|+ +.+
T Consensus 29 ~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~~~fv~v~~d~~~~-~~~~l~~~y~------v~~ 101 (153)
T 2dlx_A 29 GSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIREHFIFWQVYHDSE-EGQRYIQFYK------LGD 101 (153)
T ss_dssp SCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHHHTEEEEEEESSSH-HHHHHHHHHT------CCS
T ss_pred cCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHHcCeEEEEEecCCH-hHHHHHHHcC------CCC
Confidence 4666655 4589999999999999999997644 567777766777788888643 4566889999 899
Q ss_pred ccEEEEeCCC-CCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPG-CKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g-~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+|+++++.+. ... ...+.| .+++++++++.+.
T Consensus 102 ~P~~~fld~~~G~~---l~~~~g-~~~~~fl~~L~~~ 134 (153)
T 2dlx_A 102 FPYVSILDPRTGQK---LVEWHQ-LDVSSFLDQVTGF 134 (153)
T ss_dssp SSEEEEECTTTCCC---CEEESS-CCHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcE---eeecCC-CCHHHHHHHHHHH
Confidence 9999999764 321 334556 8999999988776
No 199
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.71 E-value=2.5e-08 Score=98.02 Aligned_cols=92 Identities=11% Similarity=-0.047 Sum_probs=74.4
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccch------------------------hhhHHHhhC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIR------------------------LATHLAERK 206 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~------------------------~~~~l~~~~ 206 (423)
.++++||.||++||++|+.+.|.++++++++.+. +.|..|+|++.. ....+++.|
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~y 160 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNY 160 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHc
Confidence 3689999999999999999999999999999874 789999885210 124578888
Q ss_pred CCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHhh
Q 014549 207 PIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATAI 253 (423)
Q Consensus 207 ~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~ 253 (423)
+ |.++|+++++ ++|.. ...+.|..+.+.|.+++.+.+
T Consensus 161 g------V~~~Pt~~lID~~G~I----v~~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 161 R------NRYWPAEYLIDATGTV----RHIKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp T------CCEESEEEEECTTSBE----EEEEESBCCHHHHHHHHHHHH
T ss_pred C------CCccCEEEEEeCCCeE----EEEEcCCCCHHHHHHHHHHHH
Confidence 8 8999999888 55544 446779899999999998763
No 200
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=5.8e-08 Score=82.84 Aligned_cols=88 Identities=11% Similarity=0.065 Sum_probs=69.3
Q ss_pred CCCcEEEEEecCCCcc--ccccHHHHHHHHHHh-hcc-ceEEEEEcccchh----------------------hhHHHhh
Q 014549 152 DSKPWLIQVYSDGSYL--CGQFSGAWKTIAALL-EGI-ANTGMVELGDIRL----------------------ATHLAER 205 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~--C~~~~p~~~~~A~~l-~~~-~~~~~Vdc~~~~~----------------------~~~l~~~ 205 (423)
.+++++|.||++||++ |+...|.+.++.+++ ++. +.|..|+++.++. ...+++.
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 111 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQ 111 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHH
Confidence 4689999999999999 999999999999999 665 7899999885431 2367888
Q ss_pred CCCCccccccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 206 KPIGQIFFRRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 206 ~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+ |.++|+++++ ++|.. .+.. .+.+.+.+.+.+.
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~~-~~~~~l~~~l~~l 146 (150)
T 3fw2_A 112 YS------IYKIPANILLSSDGKI------LAKN-LRGEELKKKIENI 146 (150)
T ss_dssp TT------CCSSSEEEEECTTSBE------EEES-CCHHHHHHHHHHH
T ss_pred cC------CCccCeEEEECCCCEE------EEcc-CCHHHHHHHHHHH
Confidence 88 8999999999 55543 3333 2677788777665
No 201
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.71 E-value=3.7e-08 Score=87.25 Aligned_cols=97 Identities=15% Similarity=0.274 Sum_probs=72.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhc-cceEEEEEcccc--hhhhHHHhhCCCC-------------ccccc-
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDI--RLATHLAERKPIG-------------QIFFR- 214 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~--~~~~~l~~~~~~~-------------~~~~i- 214 (423)
.+++++|.||++||++|+...|.++++.+.+.+ .+.|..|+++.+ ......++++++. ..+.+
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 138 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAI 138 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTT
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccc
Confidence 467999999999999999999999999999974 478999998844 2345677777731 11112
Q ss_pred ---cCccEEEEe-CCCCCCCCCcccccCCCC--HHHHHHHHHHh
Q 014549 215 ---RGLPSLVAF-PPGCKSSDCMTRFEGELS--VDAVTDWFATA 252 (423)
Q Consensus 215 ---~~~Pti~~f-~~g~~~~~~~~~y~G~~~--~~~l~~fi~~~ 252 (423)
.++|+++++ ++|.. ...|.|..+ .+++.+++.+.
T Consensus 139 ~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 178 (186)
T 1jfu_A 139 GRALGMPTSVLVDPQGCE----IATIAGPAEWASEDALKLIRAA 178 (186)
T ss_dssp TCCSSSSEEEEECTTSBE----EEEEESCCCTTSHHHHHHHHHH
T ss_pred cccCCCCEEEEECCCCCE----EEEEecCCccCHHHHHHHHHHH
Confidence 389999999 55544 345677654 78899988776
No 202
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.70 E-value=2.8e-08 Score=88.77 Aligned_cols=92 Identities=8% Similarity=-0.014 Sum_probs=71.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccc--------------------------hhhhHHHh
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------------------------RLATHLAE 204 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~--------------------------~~~~~l~~ 204 (423)
...+++|.||++||++|+...|.++++++++.+. +.|..|+++.. .....+++
T Consensus 45 gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 124 (196)
T 2ywi_A 45 SDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAK 124 (196)
T ss_dssp CSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHH
T ss_pred CCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHH
Confidence 3345999999999999999999999999999875 89999998521 02345777
Q ss_pred hCCCCccccccCccEEEEe-CCCCCCCCCccc---------ccCCCCHHHHHHHHHHhh
Q 014549 205 RKPIGQIFFRRGLPSLVAF-PPGCKSSDCMTR---------FEGELSVDAVTDWFATAI 253 (423)
Q Consensus 205 ~~~~~~~~~i~~~Pti~~f-~~g~~~~~~~~~---------y~G~~~~~~l~~fi~~~~ 253 (423)
.|+ |.++|+++++ ++|.. ... +.|..+.+.|.+.+.+.+
T Consensus 125 ~~~------v~~~P~~~lid~~G~i----~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 125 AYD------AACTPDFYIFDRDLKC----VYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp HHT------CCEESEEEEEETTCBE----EEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred HhC------CCCCCeEEEEcCCCeE----EEccccCcccccccCccCHHHHHHHHHHHH
Confidence 787 8899999999 55543 122 457778899999988763
No 203
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.69 E-value=3e-08 Score=87.49 Aligned_cols=88 Identities=15% Similarity=0.081 Sum_probs=67.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch--------------------hhhHHHhhCCCCcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--------------------LATHLAERKPIGQI 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~--------------------~~~~l~~~~~~~~~ 211 (423)
.+++++|.||++||++|+...|.+++++++ .+.|..|+++++. ....+++.|+
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 129 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLG---- 129 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHT----
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcC----
Confidence 368999999999999999999999999876 3677777753211 2244667777
Q ss_pred ccccCccEEEEeC-CCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 FFRRGLPSLVAFP-PGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.++|+++++- +|.. ...+.|..+.+.+.+++.+.
T Consensus 130 --v~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~~ 165 (176)
T 3kh7_A 130 --VYGAPETYLIDKQGII----RHKIVGVVDQKVWREQLAPL 165 (176)
T ss_dssp --CCSSCEEEEECTTCBE----EEEEESCCCHHHHHHHTHHH
T ss_pred --CCCCCeEEEECCCCeE----EEEEcCCCCHHHHHHHHHHH
Confidence 88999877774 4543 34667999999999888776
No 204
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.69 E-value=2.9e-08 Score=88.16 Aligned_cols=90 Identities=9% Similarity=0.065 Sum_probs=69.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc--------------------------hhhhHHHhh
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--------------------------RLATHLAER 205 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~--------------------------~~~~~l~~~ 205 (423)
.+++++|.||++||++|+...|.++++++++.+.+.|..|+++.. .....+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 111 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKA 111 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHH
Confidence 358999999999999999999999999999987688889988421 023457788
Q ss_pred CCCCccccccCccEEEEeC-CCCCCCCCccccc----------CCCCHHHHHHHHHHhh
Q 014549 206 KPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFE----------GELSVDAVTDWFATAI 253 (423)
Q Consensus 206 ~~~~~~~~i~~~Pti~~f~-~g~~~~~~~~~y~----------G~~~~~~l~~fi~~~~ 253 (423)
|+ |.++|+++++. +|.. .+. |..+.+.|.+.+.+.+
T Consensus 112 ~~------v~~~P~~~lid~~G~i------~~~g~~~~~~~~~g~~~~~~l~~~i~~ll 158 (188)
T 2cvb_A 112 YR------ALRTPEVFLFDERRLL------RYHGRVNDNPKDPSKVQSHDLEAAIEALL 158 (188)
T ss_dssp TT------CCEESEEEEECTTCBE------EEEECSSSCTTCGGGCCCCHHHHHHHHHH
T ss_pred cC------CCCCCeEEEECCCCcE------EEEEecCCccccccccCHHHHHHHHHHHH
Confidence 88 88999999994 4543 333 3346788988887763
No 205
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.64 E-value=2.4e-08 Score=103.44 Aligned_cols=95 Identities=15% Similarity=0.132 Sum_probs=76.7
Q ss_pred eEeccCCcccccC-CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCc
Q 014549 139 NVVTSEDFPSIFH-DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGL 217 (423)
Q Consensus 139 ~~L~~~nf~~~v~-~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~ 217 (423)
..++++.++.+.+ +....++.||++||++|+.+.|.++++|.... .+.+.+||.+ ..++++++++ |.++
T Consensus 102 ~~~~~~~~~~i~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v~~~~vd~~---~~~~~~~~~~------i~sv 171 (521)
T 1hyu_A 102 SKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RIKHTAIDGG---TFQNEITERN------VMGV 171 (521)
T ss_dssp CCSCHHHHHHHHHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TEEEEEEETT---TCHHHHHHTT------CCSS
T ss_pred CCCCHHHHHHHHhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ceEEEEEech---hhHHHHHHhC------CCcc
Confidence 3466666655542 35567899999999999999999999998875 7899999999 5566999999 9999
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
||+++ +|+. ...|..+.+.|.+|+.+
T Consensus 172 Pt~~i--~g~~------~~~G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 172 PAVFV--NGKE------FGQGRMTLTEIVAKVDT 197 (521)
T ss_dssp SEEEE--TTEE------EEESCCCHHHHHHHHCC
T ss_pred CEEEE--CCEE------EecCCCCHHHHHHHHhh
Confidence 99977 6644 35599999999999754
No 206
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.63 E-value=2.7e-09 Score=87.28 Aligned_cols=89 Identities=12% Similarity=0.132 Sum_probs=56.6
Q ss_pred cccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch--hhhHHHhhCCCCccccccCccEEEEe
Q 014549 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR--LATHLAERKPIGQIFFRRGLPSLVAF 223 (423)
Q Consensus 146 f~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~--~~~~l~~~~~~~~~~~i~~~Pti~~f 223 (423)
++++++. +.+++ ||++||++|+.+.|.+++++.. ..+..||.+.+. ....++++++ +.++||+ |
T Consensus 13 ~~~~~~~-~~vv~-f~a~~C~~C~~~~~~l~~~~~~----~~~v~v~~~~~~~~~~~~l~~~~~------v~~~Pt~--~ 78 (116)
T 2e7p_A 13 AKELASS-APVVV-FSKTYCGYCNRVKQLLTQVGAS----YKVVELDELSDGSQLQSALAHWTG------RGTVPNV--F 78 (116)
T ss_dssp HHHHHTS-SSEEE-EECTTCHHHHHHHHHHHHHTCC----CEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE--E
T ss_pred HHHHHcC-CCEEE-EECCCChhHHHHHHHHHHcCCC----eEEEEccCCCChHHHHHHHHHHhC------CCCcCEE--E
Confidence 3444544 45555 9999999999999999887533 344444444210 0145888998 9999999 5
Q ss_pred CCCCCCCCCcccccCCC---CHHHHHHHHHHh
Q 014549 224 PPGCKSSDCMTRFEGEL---SVDAVTDWFATA 252 (423)
Q Consensus 224 ~~g~~~~~~~~~y~G~~---~~~~l~~fi~~~ 252 (423)
.+|.. ...+.|.. +.+.|.+++.+.
T Consensus 79 ~~g~~----v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 79 IGGKQ----IGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp ETTEE----EECHHHHHHHHHTTCHHHHHHHT
T ss_pred ECCEE----ECChHHHHHHHhCChHHHHHHHc
Confidence 56644 23444433 455677777654
No 207
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.58 E-value=2.1e-07 Score=80.26 Aligned_cols=91 Identities=12% Similarity=0.015 Sum_probs=70.3
Q ss_pred CCCcEEEEEecCCCcc-ccccHHHHHHHHHHhhc-----cceEEEEEcccch-------------------------hhh
Q 014549 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~~~p~~~~~A~~l~~-----~~~~~~Vdc~~~~-------------------------~~~ 200 (423)
.+++++|.||++||++ |+...|.+.++.++++. .+.+..|+++.++ ...
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~ 101 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVD 101 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3679999999999998 99999999999999875 5788888887421 112
Q ss_pred HHHhhCCCCccccccCcc---------------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 201 ~l~~~~~~~~~~~i~~~P---------------ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.+++.|+ |...| +++++ ++|.. ...|.|..+.++|.+.+.+.
T Consensus 102 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 159 (164)
T 2ggt_A 102 QVARAYR------VYYSPGPKDEDEDYIVDHTIIMYLIGPDGEF----LDYFGQNKRKGEIAASIATH 159 (164)
T ss_dssp HHHHTTT------CCEEEEEECTTSCEEEEECCEEEEECTTSCE----EEEEETTCCHHHHHHHHHHH
T ss_pred HHHHhcC------eEEEecCCCCCCCeeEeccceEEEECCCCeE----EEEeCCCCCHHHHHHHHHHH
Confidence 4677777 88888 55555 55654 44667888999999988776
No 208
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.57 E-value=8e-08 Score=81.26 Aligned_cols=87 Identities=5% Similarity=-0.100 Sum_probs=64.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-----------------------hhHHHhhCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-----------------------ATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-----------------------~~~l~~~~~ 207 (423)
.+++++|.||++||++|+...|.+.++.+++.+. +.|..|+++.+.. ...+++.|+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 110 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYD 110 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcC
Confidence 4689999999999999999999999999998754 7888888874321 134667777
Q ss_pred CCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHH
Q 014549 208 IGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFA 250 (423)
Q Consensus 208 ~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~ 250 (423)
|.++|+.+++.++... .+.+ .+.+++.+++.
T Consensus 111 ------v~~~P~~~lid~~G~i-----~~~~-~~~~~l~~~l~ 141 (143)
T 4fo5_A 111 ------LRKGFKNFLINDEGVI-----IAAN-VTPEKLTEILK 141 (143)
T ss_dssp ------GGGCCCEEEECTTSBE-----EEES-CCHHHHHHHHT
T ss_pred ------CCCCCcEEEECCCCEE-----EEcc-CCHHHHHHHHH
Confidence 9999998888644331 3332 34566666653
No 209
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.56 E-value=3.6e-08 Score=98.07 Aligned_cols=63 Identities=25% Similarity=0.510 Sum_probs=53.3
Q ss_pred cccccccccccCCCCHHHHHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHHHHcCChhhHhhhhh
Q 014549 36 PPSHYDALGIKPYSSVEQVKEAYEKFSSKWNSGEEIP------STADFLKIQYAYELLTDPLWKRNYDV 98 (423)
Q Consensus 36 ~~d~y~~lg~~~~a~~~~ik~ayr~l~~~~hPd~~~~------~~~~f~~i~~Ay~~L~~~~~r~~yd~ 98 (423)
..++|++||+.+.++.++|+++|+++++++|||+.++ +.++|..|.+||++|+||++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 3489999999999999999999999999999998864 45679999999999999999999997
No 210
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.97 E-value=8e-09 Score=87.09 Aligned_cols=70 Identities=16% Similarity=0.098 Sum_probs=55.2
Q ss_pred CC-cEEEEEecCCCccccccHHHHHHHHHHhh---ccceEEEEEcccchh----------------------hhHHHhhC
Q 014549 153 SK-PWLIQVYSDGSYLCGQFSGAWKTIAALLE---GIANTGMVELGDIRL----------------------ATHLAERK 206 (423)
Q Consensus 153 ~~-~~lV~FYapwC~~C~~~~p~~~~~A~~l~---~~~~~~~Vdc~~~~~----------------------~~~l~~~~ 206 (423)
++ +++|.||++||++|+.+.|.++++++.++ ..+.+..|+++++.. ...+++.|
T Consensus 25 gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (143)
T 2lus_A 25 DKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKY 104 (143)
Confidence 44 99999999999999999999999999883 346788888774321 13577777
Q ss_pred CCCccccccCccEEEEeC-CCCC
Q 014549 207 PIGQIFFRRGLPSLVAFP-PGCK 228 (423)
Q Consensus 207 ~~~~~~~i~~~Pti~~f~-~g~~ 228 (423)
+ |.++|+++++. +|..
T Consensus 105 ~------v~~~P~~~lid~~G~i 121 (143)
T 2lus_A 105 G------ITGIPALVIVKKDGTL 121 (143)
Confidence 7 99999999997 4543
No 211
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.54 E-value=1.4e-08 Score=77.47 Aligned_cols=61 Identities=16% Similarity=0.150 Sum_probs=46.0
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCC
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGC 227 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~ 227 (423)
++.||+|||++|+.+.|.+++++++....+.+..||.+ ....++++++| ++++||+++ +|+
T Consensus 4 ~~~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~g------v~~vPt~~i--~g~ 64 (80)
T 2k8s_A 4 KAIFYHAGCPVCVSAEQAVANAIDPSKYTVEIVHLGTD--KARIAEAEKAG------VKSVPALVI--DGA 64 (80)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHSCTTTEEEEEEETTTC--SSTHHHHHHHT------CCEEEEEEE--TTE
T ss_pred eEEEeCCCCCchHHHHHHHHHHHHhcCCeEEEEEecCC--hhhHHHHHHcC------CCcCCEEEE--CCE
Confidence 67899999999999999999987765444455555442 12345788888 999999987 554
No 212
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.54 E-value=3e-07 Score=81.97 Aligned_cols=97 Identities=9% Similarity=-0.070 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHH-hhCCCCc-----------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLA-ERKPIGQ----------- 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~-~~~~~~~----------- 210 (423)
.+++++|.||++||+.|+...|.+.++.+++.+. +.|..|++++ .......+ +++++..
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 4689999999999999999999999999999876 8999999872 12223344 3432210
Q ss_pred ------------cccccCcc------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 ------------IFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ------------~~~i~~~P------ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.+++.++| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 183 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEKKLIPL 183 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcE----EEEECCCCCHHHHHHHHHHH
Confidence 12478889 55444 66655 34677888999999988776
No 213
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.53 E-value=5.4e-08 Score=84.68 Aligned_cols=97 Identities=13% Similarity=-0.011 Sum_probs=72.4
Q ss_pred CCCcEEEEEecCCCcc-ccccHHHHHHHHHHhhc----cceEEEEEcccchh----h---------------------hH
Q 014549 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDIRL----A---------------------TH 201 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~~~p~~~~~A~~l~~----~~~~~~Vdc~~~~~----~---------------------~~ 201 (423)
.+++++|.||++||++ |+...|.+.++.+++.+ .+.|..|+++.++. . ..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 113 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVRE 113 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4679999999999998 99999999999998874 57899999873210 0 34
Q ss_pred HHhhCCCC---------ccccccCccEEEEeCCCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 014549 202 LAERKPIG---------QIFFRRGLPSLVAFPPGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (423)
Q Consensus 202 l~~~~~~~---------~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~--~~~~l~~fi~~~ 252 (423)
+++.|++. ..+.|.+.|+++++.+|.. ...|.|.. +.+.|.+.+.+.
T Consensus 114 ~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid~G~i----~~~~~g~~~~~~~~l~~~l~~l 171 (172)
T 2k6v_A 114 AAQTFGVFYQKSQYRGPGEYLVDHTATTFVVKEGRL----VLLYSPDKAEATDRVVADLQAL 171 (172)
T ss_dssp HHHHHTCCEEEEEEEETTEEEEEECCCEEEEETTEE----EEEECHHHHTCHHHHHHHHHHC
T ss_pred HHHhcCeEEEeccCCCCCCceEecCCEEEEEECCEE----EEEECCCCCCCHHHHHHHHHHh
Confidence 66666631 2244678999999984433 34566777 889999888653
No 214
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.53 E-value=1.7e-07 Score=85.72 Aligned_cols=88 Identities=11% Similarity=0.100 Sum_probs=67.9
Q ss_pred CCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccc--------------------------hhhhHHHhh
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDI--------------------------RLATHLAER 205 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~--------------------------~~~~~l~~~ 205 (423)
..+++|.||++||+.|+...|.++++++++.+. +.|..|+++.. .....+++.
T Consensus 59 k~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ 138 (218)
T 3u5r_E 59 SPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKA 138 (218)
T ss_dssp CSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHH
Confidence 335999999999999999999999999999876 78999998411 023457888
Q ss_pred CCCCccccccCccEEEEeC-CCCCCCCCcccccC-----------CCCHHHHHHHHHHh
Q 014549 206 KPIGQIFFRRGLPSLVAFP-PGCKSSDCMTRFEG-----------ELSVDAVTDWFATA 252 (423)
Q Consensus 206 ~~~~~~~~i~~~Pti~~f~-~g~~~~~~~~~y~G-----------~~~~~~l~~fi~~~ 252 (423)
|+ |.++|+++++- +|.. .|.| ..+.+.|.+.+.+.
T Consensus 139 ~~------v~~~P~~~liD~~G~i------~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 139 YG------AACTPDFFLYDRERRL------VYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp HT------CCEESEEEEECTTCBE------EEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred cC------CCCCCeEEEECCCCcE------EEeccccccccccccccCHHHHHHHHHHH
Confidence 88 88999999994 4433 4543 34567788887766
No 215
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.53 E-value=6.6e-08 Score=77.34 Aligned_cols=81 Identities=11% Similarity=0.027 Sum_probs=61.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCC
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSD 231 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~ 231 (423)
...+.++.|+++||++|+.+.|.++++++ .+.+..||.++. ...+++++++ . ++|++ |.+|+.
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l~~----~i~~~~vdi~~~-~~~el~~~~g-~------~vP~l--~~~g~~--- 76 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPYKD----RFILQEVDITLP-ENSTWYERYK-F------DIPVF--HLNGQF--- 76 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTTSS----SSEEEEEETTSS-TTHHHHHHSS-S------SCSEE--EESSSE---
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHhhh----CCeEEEEECCCc-chHHHHHHHC-C------CCCEE--EECCEE---
Confidence 35678899999999999999999887653 278999999822 2366888886 4 89986 456643
Q ss_pred CcccccCCCCHHHHHHHHHHh
Q 014549 232 CMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 232 ~~~~y~G~~~~~~l~~fi~~~ 252 (423)
...|..+.+.|.+++.+.
T Consensus 77 ---~~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 77 ---LMMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp ---EEESSCCHHHHHHHHHSS
T ss_pred ---EEecCCCHHHHHHHHHHH
Confidence 234667889999999765
No 216
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.53 E-value=4.1e-07 Score=79.01 Aligned_cols=91 Identities=10% Similarity=0.018 Sum_probs=70.2
Q ss_pred CCCcEEEEEecCCCcc-ccccHHHHHHHHHHhhc-----cceEEEEEcccch-------------------------hhh
Q 014549 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG-----IANTGMVELGDIR-------------------------LAT 200 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~~~p~~~~~A~~l~~-----~~~~~~Vdc~~~~-------------------------~~~ 200 (423)
.+++++|.||++||++ |+...|.++++.++++. .+.|..|+++.++ ...
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~ 104 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVA 104 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHH
Confidence 3679999999999998 99999999999999963 5788888887321 112
Q ss_pred HHHhhCCCCccccccCcc---------------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 201 HLAERKPIGQIFFRRGLP---------------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 201 ~l~~~~~~~~~~~i~~~P---------------ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.+++.|+ |...| +++++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 105 ~~~~~~~------v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~l~~l 162 (171)
T 2rli_A 105 QASHSYR------VYYNAGPKDEDQDYIVDHSIAIYLLNPDGLF----TDYYGRSRSAEQISDSVRRH 162 (171)
T ss_dssp HHHHHSC------CCCEECCCCSSCCCCEECCCEEEEECTTSCE----EEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHhC------eEEEecCCCCCCCeEEeccceEEEECCCCeE----EEEECCCCCHHHHHHHHHHH
Confidence 4777787 77777 66665 55654 34677888999999998776
No 217
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.52 E-value=7.1e-08 Score=70.44 Aligned_cols=51 Identities=14% Similarity=0.041 Sum_probs=46.3
Q ss_pred cccccccccCC---CCHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHcCC
Q 014549 38 SHYDALGIKPY---SSVEQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYELLTD 89 (423)
Q Consensus 38 d~y~~lg~~~~---a~~~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~L~~ 89 (423)
.-|.||||+++ ++.++|+++||+|...+|||+. +..-....|+.|.+.|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG-GS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 46889999999 9999999999999999999996 778889999999998864
No 218
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=98.52 E-value=2.6e-07 Score=81.70 Aligned_cols=97 Identities=12% Similarity=0.091 Sum_probs=70.4
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHhh-CCCC------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIG------------ 209 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~~-~~~~------------ 209 (423)
.+++++|.||++||+.|+...|.++++++++++. +.|..|+|+. .......+++ +++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~ 127 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGT 127 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCc
Confidence 4679999999999999999999999999999876 7899999863 1223344555 3322
Q ss_pred --c---cccccCcc--------EEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 --Q---IFFRRGLP--------SLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 --~---~~~i~~~P--------ti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
. .+.+.++| ++++-++|.. ...|.|..+.++|.+.+.+.
T Consensus 128 ~~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 179 (181)
T 2p31_A 128 GAHPAFKYLAQTSGKEPTWNFWKYLVAPDGKV----VGAWDPTVSVEEVRPQITAL 179 (181)
T ss_dssp TSCHHHHHHHHHHSCCCCSTTCEEEECTTSCE----EEEECTTSCHHHHHHHHHTT
T ss_pred cchhhhhhhhhcCCCccccceeEEEEcCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 0 23366788 4555566655 34577888889998888654
No 219
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.48 E-value=3.3e-07 Score=80.05 Aligned_cols=96 Identities=8% Similarity=-0.075 Sum_probs=65.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcc--------cchhhhHHH-hhCCCC------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG--------DIRLATHLA-ERKPIG------------ 209 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~--------~~~~~~~l~-~~~~~~------------ 209 (423)
.+++++|.||++||+.|+ ..|.+.++.+++.+. +.|..|+++ ........+ +++++.
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~~~~~~~~~~~~~p~~~d~d~~~~ 109 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEIAQFCQLNYGVTFPIMKKIDVNGG 109 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC------------------CCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCceEEeeccCCCc
Confidence 468999999999999999 999999999999876 788899874 111122233 332211
Q ss_pred -----------ccccccCcc------EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 -----------QIFFRRGLP------SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 -----------~~~~i~~~P------ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
..+++.++| +.+++ ++|.. ...+.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~~~~~~~~v~~~P~i~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (171)
T 3cmi_A 110 NEDPVYKFLKSQKSGMLGLRGIKWNFEKFLVDKKGKV----YERYSSLTKPSSLSETIEEL 166 (171)
T ss_dssp TBCHHHHHHHHHSCCSSSCCSCCSTTCEEEECSSSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cchHHHHHHHhccCCcCCCCcccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHHH
Confidence 023488899 55555 66654 34667888888898888776
No 220
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.46 E-value=3.4e-07 Score=70.15 Aligned_cols=79 Identities=10% Similarity=0.173 Sum_probs=58.3
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchh-hhHHHhhCCCCccccccCccEEEEeCCCCCCCCCccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~-~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~ 235 (423)
++.|+++||++|+++.+.+++++....+ +.+..+|.++++. ..+++++++.+ +.++|++ |.+|+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~~-i~~~~vdi~~~~~~~~~l~~~~~~~----~~~vP~i--~~~g~~------- 68 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERDD-FQYQYVDIRAEGITKEDLQQKAGKP----VETVPQI--FVDQQH------- 68 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHSS-CEEEEECHHHHTCCSHHHHHHTCCC----SCCSCEE--EETTEE-------
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCCC-ceEEEEecccChHHHHHHHHHhCCC----CceeCeE--EECCEE-------
Confidence 6789999999999999999999887654 7889999874421 23688887743 7799998 345532
Q ss_pred ccCCCCHHHHHHHHHHh
Q 014549 236 FEGELSVDAVTDWFATA 252 (423)
Q Consensus 236 y~G~~~~~~l~~fi~~~ 252 (423)
..| .++|.+++.+.
T Consensus 69 i~~---~~~l~~~~~~~ 82 (85)
T 1ego_A 69 IGG---YTDFAAWVKEN 82 (85)
T ss_dssp EES---SHHHHHHHHHH
T ss_pred EEC---HHHHHHHHHHh
Confidence 222 36788887664
No 221
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.45 E-value=4.6e-07 Score=78.51 Aligned_cols=97 Identities=8% Similarity=-0.077 Sum_probs=70.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHh-hCCCCcc----------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIGQI---------- 211 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~-~~~~~~~---------- 211 (423)
.+++++|.||++||+.|+...|.+.++++++.+. +.|..|+++. .......++ ++++...
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 110 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGE 110 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSST
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCC
Confidence 4689999999999999999999999999999876 8999999852 122333455 5543200
Q ss_pred -------------ccc--cCcc---EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 212 -------------FFR--RGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 212 -------------~~i--~~~P---ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+++ .++| +.+++ ++|.. ...+.|..+.+.|.+.+.+.
T Consensus 111 ~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 166 (170)
T 2p5q_A 111 NASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQV----VDRYYPTTSPLSLERDIKQL 166 (170)
T ss_dssp TBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred chHHHHHHHHhcCCCccCCcccccccEEEECCCCCE----EEeeCCCCCHHHHHHHHHHH
Confidence 134 6778 65555 66654 34677888888899888776
No 222
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=2.9e-08 Score=85.51 Aligned_cols=95 Identities=8% Similarity=-0.026 Sum_probs=62.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHH-HHHHhh--ccceEEEEEcccchh-hhHHHhhCCCC------------cccc--
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKT-IAALLE--GIANTGMVELGDIRL-ATHLAERKPIG------------QIFF-- 213 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~-~A~~l~--~~~~~~~Vdc~~~~~-~~~l~~~~~~~------------~~~~-- 213 (423)
.+++++|.||++||++|+...|.+++ +.+.+. ..+.+..|++++++. .....+++++. ..|.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 111 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALR 111 (159)
Confidence 46789999999999999999999998 888776 347888888874422 22233333211 1222
Q ss_pred ccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 214 RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 214 i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
+.++|+++++ ++|.. ...+.| .+.+++.+++.+
T Consensus 112 ~~~~P~~~lid~~G~i----~~~~~g-~~~~~l~~~l~~ 145 (159)
T 2ls5_A 112 DAGITRNVLIDREGKI----VKLTRL-YNEEEFASLVQQ 145 (159)
Confidence 4679999988 55654 223445 345556665543
No 223
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=98.39 E-value=8.2e-07 Score=76.84 Aligned_cols=97 Identities=8% Similarity=-0.059 Sum_probs=67.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHH-HhhCCCCc-----------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHL-AERKPIGQ----------- 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l-~~~~~~~~----------- 210 (423)
.+++++|.||++||++|+...|.++++.+++.+. +.|..|+++. ....... .+++++..
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGS 109 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSEEBCCCCCSST
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHHHHHHHHhcCCCCceEEEEeecCc
Confidence 4689999999999999999999999999999875 7899999863 1122333 24443210
Q ss_pred ----cc--------c-----ccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 211 ----IF--------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 211 ----~~--------~-----i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.+ + |..+|+.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 110 ~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 110 DADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQP----VKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp TSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCE----EEEECTTSCGGGGHHHHHHH
T ss_pred cccHHHHHHHhhcCCccCCcccccceEEEECCCCCE----EEEcCCCCCHHHHHHHHHHH
Confidence 01 2 3445776666 55544 34567888888888888765
No 224
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=98.38 E-value=1.5e-06 Score=77.30 Aligned_cols=97 Identities=10% Similarity=0.026 Sum_probs=68.7
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHh-hCCCC------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAE-RKPIG------------ 209 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~-~~~~~------------ 209 (423)
.++++||.||++||+.|+...|.+.++.+++++. +.|..|+++. .......++ ++++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 4689999999999999999999999999999876 7888898862 111122222 22321
Q ss_pred --------------ccccccCcc---EEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 210 --------------QIFFRRGLP---SLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 210 --------------~~~~i~~~P---ti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
..+.+..+| +.+++ ++|.. ...|.|..+.+.|.+.+.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i----~~~~~g~~~~~~l~~~i~~l 181 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVP----VERFSPGASVKDIEEKLIPL 181 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCE----EEEECTTCCHHHHHHHHHHH
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 011244566 76666 56654 44677888999999998876
No 225
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.37 E-value=2.1e-06 Score=71.39 Aligned_cols=101 Identities=18% Similarity=0.221 Sum_probs=75.1
Q ss_pred CCceee--cccchhhhhhhhhcCCCceEEEEEecCCCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCe
Q 014549 256 LPRIFY--YTKESMGKNFLAKTGPHKVKVIFFSKTGERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPA 333 (423)
Q Consensus 256 ~p~~~~--it~~~~~~~fl~~~~~~~~~vl~f~~~~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Pt 333 (423)
.|.... |++.+.++.|+...+ .++|.||.+.+....+.+..+|..+ +.+.|+.+. +.+++++++++ .|+
T Consensus 18 gP~~~~~~i~s~~e~e~fi~~~~--v~VVGfF~~~~~~~~~~F~~~A~~~-~d~~F~~t~-----~~~v~~~~~v~-~~~ 88 (124)
T 2l4c_A 18 GAAQEPTWLTDVPAAMEFIAATE--VAVIGFFQDLEIPAVPILHSMVQKF-PGVSFGIST-----DSEVLTHYNIT-GNT 88 (124)
T ss_dssp CCSCCCEECCSHHHHHHHHHTSS--EEEEEECSCTTSTHHHHHHHHHHHC-TTSEEEEEC-----CHHHHHHTTCC-SSC
T ss_pred CCCCcceEcCCHHHHHHHHhcCC--CEEEEEECCCCChhHHHHHHHHHhC-CCceEEEEC-----hHHHHHHcCCC-CCe
Confidence 454433 665555788886433 3455566653333467778888888 888998874 35699999997 799
Q ss_pred EEEecCCCcceeEecC----CCChhHHHHHHHhhcc
Q 014549 334 IVFLKDPGVKPVVYYG----SFNNSRLSEVMEQNKL 365 (423)
Q Consensus 334 l~lfk~~~~~~~~y~g----~~~~~~l~~fi~~~~~ 365 (423)
|++|++++..++.|.| +++.+.|.+||..|.+
T Consensus 89 vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n~l 124 (124)
T 2l4c_A 89 ICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSL 124 (124)
T ss_dssp EEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHHCC
T ss_pred EEEEEcCCCCceeecCcccCCCCHHHHHHHHHHhcC
Confidence 9999998888888986 7899999999998753
No 226
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.35 E-value=4.2e-07 Score=83.05 Aligned_cols=84 Identities=13% Similarity=0.143 Sum_probs=61.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEE---------------------------------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vd--------------------------------------- 192 (423)
+.++.++.|+++||++|+++.|.++++++. + +.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~--~-v~v~~~~~p~~~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~~ 161 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNAL--G-ITVRYLAFPRQGLDSDAEKEMKAIWCAKDKNKAFDDVMAGKSVAPA 161 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCTTCSSSHHHHHHHHHHTSSSHHHHHHHHHTTCCCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhccCHHHHHHHHHhCCCCChh
Confidence 467899999999999999999999988753 2 3332221
Q ss_pred -ccc-chhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 193 -LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 193 -c~~-~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.. -.....+++++| |+++||+ ++.+|. .+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gtPt~-v~~dG~-------~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 162 SCDVDIADHYALGVQLG------VSGTPAV-VLSNGT-------LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp CCSCCHHHHHHHHHHHT------CCSSSEE-ECTTSC-------EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC------CCccCEE-EEcCCe-------EecCCCCHHHHHHHHHHh
Confidence 221 012355788888 9999998 565652 567988999999998765
No 227
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=98.35 E-value=8.5e-07 Score=78.37 Aligned_cols=96 Identities=5% Similarity=-0.097 Sum_probs=67.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHhhCCCCc------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIGQ------------ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~~~~~~~------------ 210 (423)
.+++++|.||++||+.|+...|.++++.+++++. +.|..|+++. .......++++++..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 125 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 125 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTT
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcc
Confidence 4689999999999999999999999999999875 7899998862 122334455554320
Q ss_pred ---cc----------c-----ccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 211 ---IF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 211 ---~~----------~-----i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
.| + |+..|+++++ ++|.. ...|.|..+.+.|.+.+.+
T Consensus 126 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 126 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp SCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCE----EEEECTTSCTHHHHTTSGG
T ss_pred hhHHHHHhhccCCCCCcccccccccceEEEECCCCCE----EEEeCCCCCHHHHHHHHHH
Confidence 01 1 3345887777 55544 3456788787877776643
No 228
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.33 E-value=1.1e-06 Score=77.83 Aligned_cols=91 Identities=12% Similarity=0.052 Sum_probs=69.2
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh----------------------hhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~----------------------~~~l~~~~~ 207 (423)
.+++++|.|| ++||+.|+...|.+.++++++.+. +.|..|+++.... ...+++.|+
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 109 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFD 109 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTT
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhC
Confidence 3579999999 999999999999999999999864 7888888874211 234666666
Q ss_pred CCcccccc------CccEEEEe-CCCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 014549 208 IGQIFFRR------GLPSLVAF-PPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (423)
Q Consensus 208 ~~~~~~i~------~~Pti~~f-~~g~~~~~~~~~y~G~----~~~~~l~~fi~~~ 252 (423)
+. ++|+++++ ++|.. ...+.|. ++.+.|.+.+.+.
T Consensus 110 ------v~~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 110 ------VLNEETGLADRGTFIIDPDGVI----QAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp ------CEETTTTEECEEEEEECTTSBE----EEEEEECTTSCCCTTHHHHHHHHH
T ss_pred ------CCcCCCCceeeEEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 87 89999999 55544 2344453 3788898888765
No 229
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.31 E-value=1.2e-06 Score=78.58 Aligned_cols=91 Identities=9% Similarity=0.034 Sum_probs=68.9
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-------------------------hhHHHh
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-------------------------~~~l~~ 204 (423)
.+++++|.|| ++||++|+...|.+.++.+++.+. +.|..|+++.... ...+++
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 111 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISR 111 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHH
Confidence 4578999999 999999999999999999998765 7888888873211 234666
Q ss_pred hCCCCcccccc-----CccEEEEe-CCCCCCCCCcccccCCC----CHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~-----~~Pti~~f-~~g~~~~~~~~~y~G~~----~~~~l~~fi~~~ 252 (423)
.|+ +. ++|+++++ ++|.. ...+.|.. +.++|.+.+.+.
T Consensus 112 ~~~------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 112 DYD------VLFEEAIALRGAFLIDKNMKV----RHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp HTT------CEETTTEECEEEEEEETTTEE----EEEEEESSSCCCHHHHHHHHHHHH
T ss_pred HhC------CcccCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 676 88 89999888 45544 23444543 678888888765
No 230
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.30 E-value=2.1e-06 Score=77.93 Aligned_cols=43 Identities=9% Similarity=-0.188 Sum_probs=39.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~ 194 (423)
.+++++|.|||+||+.|+...|.++++++++++. +.|..|+|+
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 4679999999999999999999999999999876 788899986
No 231
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.29 E-value=1.5e-06 Score=76.14 Aligned_cols=86 Identities=14% Similarity=0.120 Sum_probs=63.7
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEccc-----------------------------------
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD----------------------------------- 195 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~----------------------------------- 195 (423)
.+.++.++.|+++||++|+++.|..+++.++..+ +++...+..-
T Consensus 20 ~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~~~lf~~~~~~ 98 (175)
T 3gyk_A 20 PEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA 98 (175)
T ss_dssp TTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHHHHHHTCSSCC
T ss_pred CCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHHHHHHhcCCCC
Confidence 3567899999999999999999999999887654 5554444210
Q ss_pred -------------------------------chhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHH
Q 014549 196 -------------------------------IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDA 244 (423)
Q Consensus 196 -------------------------------~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~ 244 (423)
-.....+++++| |.++||+++ +| . .+.|..+.+.
T Consensus 99 ~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~v~~~~~~a~~~g------v~gtPt~~i--~g-~------~~~G~~~~~~ 163 (175)
T 3gyk_A 99 NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQSMALAQKLG------FNGTPSFVV--ED-A------LVPGFVEQSQ 163 (175)
T ss_dssp SHHHHHHHHHHTTCCHHHHHHHTTCHHHHHHHHHHHHHHHHHT------CCSSSEEEE--TT-E------EECSCCCHHH
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHhChHHHHHHHHHHHHHHHcC------CccCCEEEE--CC-E------EeeCCCCHHH
Confidence 012334566777 999999987 44 2 5779999999
Q ss_pred HHHHHHHh
Q 014549 245 VTDWFATA 252 (423)
Q Consensus 245 l~~fi~~~ 252 (423)
|.+.+.+.
T Consensus 164 l~~~i~~~ 171 (175)
T 3gyk_A 164 LQDAVDRA 171 (175)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988765
No 232
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.29 E-value=9.1e-07 Score=73.62 Aligned_cols=95 Identities=6% Similarity=0.008 Sum_probs=78.1
Q ss_pred eeEec-cCCcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccC
Q 014549 138 FNVVT-SEDFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRG 216 (423)
Q Consensus 138 v~~L~-~~nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~ 216 (423)
+..|+ .+++++.++++++++|-|+++||+.| .+.|.++|+.+ ..+.||.++-. +++++++ +.
T Consensus 23 ~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d~~F~~t~~~------~v~~~~~------v~- 85 (124)
T 2l4c_A 23 PTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PGVSFGISTDS------EVLTHYN------IT- 85 (124)
T ss_dssp CEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TTSEEEEECCH------HHHHHTT------CC-
T ss_pred ceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CCceEEEEChH------HHHHHcC------CC-
Confidence 34464 46788888889999999999999998 78999999999 77899988643 3888998 77
Q ss_pred ccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 217 LPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 217 ~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|+|++|++.... ...|.| ..+.++|.+||...
T Consensus 86 ~~~vvlfkkfde~---~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 86 GNTICLFRLVDNE---QLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp SSCEEEEETTTTE---EEEECHHHHTTCCHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCC---ceeecCcccCCCCHHHHHHHHHHh
Confidence 7999999986532 457886 78999999999865
No 233
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.27 E-value=1.6e-06 Score=74.96 Aligned_cols=88 Identities=15% Similarity=0.130 Sum_probs=63.0
Q ss_pred CCc-EEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh------------------hhHHHhhCCCCcc
Q 014549 153 SKP-WLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------ATHLAERKPIGQI 211 (423)
Q Consensus 153 ~~~-~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~------------------~~~l~~~~~~~~~ 211 (423)
+++ ++|.|| ++||+.|+...|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---- 103 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG---- 103 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTT----
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcC----
Confidence 455 999999 999999999999999999999875 7888888863211 234667777
Q ss_pred ccccC----ccEEEEeC-CCCCCCCCcccccCCC----CHHHHHHHHH
Q 014549 212 FFRRG----LPSLVAFP-PGCKSSDCMTRFEGEL----SVDAVTDWFA 250 (423)
Q Consensus 212 ~~i~~----~Pti~~f~-~g~~~~~~~~~y~G~~----~~~~l~~fi~ 250 (423)
+.+ +|+++++- +|.. ...|.|.. ..+.+++.+.
T Consensus 104 --v~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~il~~l~ 145 (161)
T 3drn_A 104 --AKGFILPARITFVIDKKGII----RHIYNSQMNPANHVNEALKALK 145 (161)
T ss_dssp --CCCSSSCCCEEEEECTTSBE----EEEEECSSCTTHHHHHHHHHHH
T ss_pred --CCCcCcccceEEEECCCCEE----EEEEecCCCCCcCHHHHHHHHH
Confidence 888 99988885 4543 33556633 2344444443
No 234
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.24 E-value=8.1e-06 Score=78.24 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=96.3
Q ss_pred cccchhhhhhhhhcCCCc-eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHK-VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~-~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++..+ +++.+.. .++ ++|.|+++.| ....|.+..++..+.+.+.++.+.........++++|+|.++||+++|
T Consensus 22 lt~~~-f~~~i~~--~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~ 98 (298)
T 3ed3_A 22 LTPKS-FDKAIHN--TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVF 98 (298)
T ss_dssp CCHHH-HHHHHTS--SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEE
T ss_pred eCHHH-HHHHHHh--CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEE
Confidence 56555 4555532 223 5555666532 224577777888887778888887554345789999999999999999
Q ss_pred cCCC----------------cceeEecCCCChhHHHHHHHhhccccCcccccccccccCCCCCCccCCCCCCcceEEEEE
Q 014549 338 KDPG----------------VKPVVYYGSFNNSRLSEVMEQNKLQELPQLRSVTSMELGCDARGYSRAGSDTTIWYCVIL 401 (423)
Q Consensus 338 k~~~----------------~~~~~y~g~~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~~~~~~~~~~~~~~~cvi~ 401 (423)
+++. ..+..|.|.++.+.|.+|+.+..-+.+.++++....+..... . . ..+||+
T Consensus 99 ~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~~~~~v~~i~~~~~l~~~l~~---~--~-----~~~vi~ 168 (298)
T 3ed3_A 99 RPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSRIRSYVKKFVRIDTLGSLLRK---S--P-----KLSVVL 168 (298)
T ss_dssp ECCCC-------------CCCEEEECCSCCSHHHHHHHHHTTCCCCEEECSCGGGHHHHHTS---C--S-----SEEEEE
T ss_pred ECCceeecccccccccccccccceeecCCcCHHHHHHHHHHhcccccEEcCCHHHHHHHHhc---C--C-----ceEEEE
Confidence 9864 246789999999999999999776666677654433322111 0 1 377777
Q ss_pred EccCC---hhhHHHHHHHhh
Q 014549 402 AGRLS---PELNKMREVSIS 418 (423)
Q Consensus 402 ~~~~~---~~~~~~~~~~~~ 418 (423)
+.... ..+..+...|++
T Consensus 169 fs~~~~~~~~f~~~A~~~~~ 188 (298)
T 3ed3_A 169 FSKQDKISPVYKSIALDWLG 188 (298)
T ss_dssp EESSSSCCHHHHHHHHHTBT
T ss_pred EcCCCcchHHHHHHHHHhhc
Confidence 75432 345666666654
No 235
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.24 E-value=2.5e-06 Score=76.21 Aligned_cols=91 Identities=12% Similarity=0.014 Sum_probs=68.7
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh----------------------hhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL----------------------ATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~----------------------~~~l~~~~~ 207 (423)
.+++++|.|| ++||+.|+...|.+.++.+++.+. +.|..|+++.... ...+++.|+
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 123 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAG 123 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhC
Confidence 3578999999 999999999999999999999864 7888888874221 233555555
Q ss_pred CCcccccc-----CccEEEEeC-CCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 014549 208 IGQIFFRR-----GLPSLVAFP-PGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (423)
Q Consensus 208 ~~~~~~i~-----~~Pti~~f~-~g~~~~~~~~~y~G~----~~~~~l~~fi~~~ 252 (423)
|. ++|+++++. +|.. ...+.|. ++.++|.+.+.+.
T Consensus 124 ------v~~~~g~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 168 (195)
T 2bmx_A 124 ------VLNADGVADRVTFIVDPNNEI----QFVSATAGSVGRNVDEVLRVLDAL 168 (195)
T ss_dssp ------CBCTTSSBCEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred ------CcccCCCccceEEEEcCCCeE----EEEEecCCCCCCCHHHHHHHHHHH
Confidence 88 899999995 4543 2344454 3788999988776
No 236
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.23 E-value=1.7e-06 Score=74.37 Aligned_cols=90 Identities=11% Similarity=0.018 Sum_probs=63.7
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh--------------------hhHHHhhCCCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL--------------------ATHLAERKPIG 209 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~--------------------~~~l~~~~~~~ 209 (423)
..++++|.|| ++||++|+...|.+.++++++++. +.|..|+++.... ...+++.|+
T Consensus 35 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-- 112 (160)
T 1xvw_A 35 GAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYG-- 112 (160)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTT--
T ss_pred CCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcC--
Confidence 3348999998 999999999999999999998754 7888888863211 345777887
Q ss_pred cccccc----Ccc--EEEEe-CCCCCCCCCcccccCCC----CHHHHHHHHHH
Q 014549 210 QIFFRR----GLP--SLVAF-PPGCKSSDCMTRFEGEL----SVDAVTDWFAT 251 (423)
Q Consensus 210 ~~~~i~----~~P--ti~~f-~~g~~~~~~~~~y~G~~----~~~~l~~fi~~ 251 (423)
+. ++| +.+++ ++|.. ...+.|.. ..+.+++.+.+
T Consensus 113 ----v~~~~~~~p~~~~~lid~~G~i----~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 113 ----VFNEQAGIANRGTFVVDRSGII----RFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp ----CEETTTTEECSEEEEECTTSBE----EEEEECCTTCCCCHHHHHHHHHH
T ss_pred ----CccccCCCeeeeEEEECCCCeE----EEEEecCCCCCCCHHHHHHHHHH
Confidence 87 899 55555 56654 23444543 45666666543
No 237
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.23 E-value=2.6e-06 Score=75.47 Aligned_cols=96 Identities=5% Similarity=-0.096 Sum_probs=65.8
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHhhCCCCc------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAERKPIGQ------------ 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~~~~~~~------------ 210 (423)
.+++++|.||++||+.|+...|.+.++.+++++. +.|..|+++. .....+.++++++..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~ 127 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDD 127 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHTTCCSEEBCCCBSSSTT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHHHHHHHHcCCCCeeeeeeccCChh
Confidence 4679999999999999999999999999999875 7899998862 112344666666430
Q ss_pred ---cc----------c-----ccCccEEEEe-CCCCCCCCCcccccCCCCHHHHHHHHHH
Q 014549 211 ---IF----------F-----RRGLPSLVAF-PPGCKSSDCMTRFEGELSVDAVTDWFAT 251 (423)
Q Consensus 211 ---~~----------~-----i~~~Pti~~f-~~g~~~~~~~~~y~G~~~~~~l~~fi~~ 251 (423)
.+ + |+..|+.+++ ++|.. ...|.|..+.++|.+.+.+
T Consensus 128 ~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 128 AHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCV----VKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp BCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCE----EEEECTTSCGGGGGGGHHH
T ss_pred hhHHHHHHHhhcccccccCCcccccceEEEECCCCCE----EEeeCCCCCHHHHHHHHHH
Confidence 01 1 2224676666 44543 3456677777777666654
No 238
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.20 E-value=5.8e-06 Score=69.70 Aligned_cols=97 Identities=12% Similarity=0.055 Sum_probs=69.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCCCC-----CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTGER-----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~~~-----~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~ 335 (423)
+++.+ +++++.+ ...++++ |..+.+.+ ..|.+..++.+|.+.+.|+.|++.+ .++++.+|+|.+.||++
T Consensus 20 vt~~~-F~~~v~~--~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~v~~~KVdvDe--~~~la~~ygV~siPTli 94 (137)
T 2qsi_A 20 VDEAT-VDDFIAH--SGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGRLVAAEVAAEA--ERGLMARFGVAVCPSLA 94 (137)
T ss_dssp ECTTT-HHHHHHT--SSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTTEEEEEECGGG--HHHHHHHHTCCSSSEEE
T ss_pred cCHhH-HHHHHhc--CCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCccCCEEE
Confidence 55655 4555532 2225555 44543333 5788899999998888998887433 47899999999999999
Q ss_pred EecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 336 lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
+||++... ....|..+.+.|.++|+++.
T Consensus 95 lFkdG~~v-~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 95 VVQPERTL-GVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp EEECCEEE-EEEESCCCHHHHHHHHHHHH
T ss_pred EEECCEEE-EEEeCCCCHHHHHHHHHHHh
Confidence 99976543 33478888899999998754
No 239
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.19 E-value=5e-06 Score=73.18 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=67.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc--------chhhhHHHhh-CCCCccc---------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD--------IRLATHLAER-KPIGQIF--------- 212 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~--------~~~~~~l~~~-~~~~~~~--------- 212 (423)
.++++||.||++||+.|+...|.+.++++++++. +.|..|+++. .......+++ +++....
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 116 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGS 116 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSST
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCc
Confidence 4679999999999999999999999999999876 7888888752 1223445666 5433111
Q ss_pred ------c-----ccCccE-----EEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 ------F-----RRGLPS-----LVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ------~-----i~~~Pt-----i~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
. +.+.|+ +++-++|.. ...|.|..+.+.|.+.+.+.
T Consensus 117 ~~~~~~~~~~~~~~~~p~~~~~~~lid~~G~i----~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 117 EGEPAFRFLVDSSKKEPRWNFWKYLVNPEGQV----VKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TCCHHHHHHHHHHTCCCSSTTCEEEECTTSCE----EEEECTTCCGGGTHHHHHHH
T ss_pred cccHHHHHHHhcCCCCccccceEEEECCCCCE----EEEECCCCCHHHHHHHHHHH
Confidence 0 112564 666666655 34677877777777766655
No 240
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.17 E-value=6.6e-06 Score=76.34 Aligned_cols=99 Identities=16% Similarity=0.191 Sum_probs=74.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe--cCCCCCchHHHHHHHhcc--ccceEEEEEccc--cc-cHHHHhhcCCC--CCC
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFS--KTGERASPFVRQISRNYW--AYASFAFVLWRE--EE-SSIWWNTFEVE--SAP 332 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~--~~~~~~~~~~~~~a~~~~--~~~~f~~v~~~~--~~-~~~l~~~f~v~--~~P 332 (423)
+++.+ ++..+... ..++|.|+. +.|. ..|.+..+|..+. ..+.|+.|.+.+ |+ .++++++|+|. ++|
T Consensus 10 Lt~~n-F~~~i~~~--~~vlV~FyA~~pWCg-l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~P 85 (240)
T 2qc7_A 10 LDTVT-FYKVIPKS--KFVLVKFDTQYPYGE-KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYP 85 (240)
T ss_dssp CCTTH-HHHHGGGC--SEEEEEECCSSCCSH-HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCS
T ss_pred CCHHH-HHHHHcCC--CCEEEEEeCCCCCCc-chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCC
Confidence 56655 45555432 235666777 6555 6788888888875 357788887554 54 37899999999 999
Q ss_pred eEEEecCCC-cceeEecCCCChhHHHHHHHhhc
Q 014549 333 AIVFLKDPG-VKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 333 tl~lfk~~~-~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
|+++|+++. ..+..|.|.++.+.|.+||+++.
T Consensus 86 Tl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 86 VFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp EEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred EEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 999999876 46788999999999999999873
No 241
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.16 E-value=1.7e-06 Score=78.68 Aligned_cols=84 Identities=17% Similarity=0.187 Sum_probs=60.5
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEE---------------------------------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE--------------------------------------- 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vd--------------------------------------- 192 (423)
+.++.++.|+++||++|+++.|..+++.+. + +++..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~--~-v~v~~~~~p~~~~~~~s~~~a~~~~~a~d~~~a~~~~~~~~~~~~~ 161 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL--G-ITVRYLAFPRAGMNNQTAKQMEAIWTAKDPVFALNEAEKGNLPKEV 161 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT--T-EEEEEEECCSSTTCSHHHHHHHHHHHSSSHHHHHHHHHTTCCCSSC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC--C-cEEEEEECCccCCCchHHHHHHHHHhCcCHHHHHHHHHcCCCCChH
Confidence 567899999999999999999999887652 2 3332211
Q ss_pred -ccc-chhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 193 -LGD-IRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 193 -c~~-~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|.. -.....+++++| |+++||+++ .+|. .+.|..+.+.|.+++.+.
T Consensus 162 ~~~~~v~~~~~l~~~~g------V~gTPt~vi-~nG~-------~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 162 KTPNIVKKHYELGIQFG------VRGTPSIVT-STGE-------LIGGYLKPADLLRALEET 209 (211)
T ss_dssp CCSSHHHHHHHHHHHHT------CCSSCEEEC-TTSC-------CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcC------CCcCCEEEE-eCCE-------EecCCCCHHHHHHHHHhc
Confidence 110 012345778888 999999987 5663 467888999999988653
No 242
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.13 E-value=1e-05 Score=71.43 Aligned_cols=111 Identities=8% Similarity=0.072 Sum_probs=74.3
Q ss_pred cccchhhhhhhhhcCCCceEEEEEec---------CC--CCCchHHHHHHHhcc-----ccceEEEEEccccccHHHHhh
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSK---------TG--ERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNT 325 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~---------~~--~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~~~l~~~ 325 (423)
+|+.+ +++++.+. .+.++|+.|.. ++ +...|.+..+|.+|. +.+.|+.|.+.+ .++++++
T Consensus 23 lt~~n-F~~~v~~~-~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~--~~~la~~ 98 (178)
T 3ga4_A 23 VTADN-YPLLSRGV-PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVNE--VPQLVKD 98 (178)
T ss_dssp CCTTT-HHHHTTCC-TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--CHHHHHH
T ss_pred CCHHH-HHHHHccc-CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECcc--CHHHHHH
Confidence 67766 45666432 23455555432 21 224678888998887 678888887543 4789999
Q ss_pred cCCCCCCeEEEecCCCcce-----------eEe---cC-CCChhHHHHHHHhhccccCcccccccc
Q 014549 326 FEVESAPAIVFLKDPGVKP-----------VVY---YG-SFNNSRLSEVMEQNKLQELPQLRSVTS 376 (423)
Q Consensus 326 f~v~~~Ptl~lfk~~~~~~-----------~~y---~g-~~~~~~l~~fi~~~~~~~lp~l~~~~~ 376 (423)
|+|.+.|||++|+++.... ..| .| .++.+.|.+||.+..-..++-..+.+.
T Consensus 99 ~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~la~fi~~~t~~~i~I~rp~ny 164 (178)
T 3ga4_A 99 LKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQFGDFLAKILNISITVPQAFNV 164 (178)
T ss_dssp TTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHHHHHHHHHHTCCCCCCCSCC-
T ss_pred cCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHHHHHHHHhcCCCccccCCCCh
Confidence 9999999999999886544 445 35 778899999999854444433333333
No 243
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.12 E-value=6e-06 Score=73.87 Aligned_cols=91 Identities=14% Similarity=0.028 Sum_probs=67.6
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-------------------------hhHHHh
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-------------------------~~~l~~ 204 (423)
.+++++|.|| ++||++|....|.+.++++++++. +.|..|+++.... ...+++
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~ 112 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSE 112 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHH
Confidence 3578999999 999999999999999999999764 7888998874221 234666
Q ss_pred hCCCCcccccc------CccEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~------~~Pti~~f~-~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|+ +. .+|+++++- +|.. ...+.| .++.+++++.+...
T Consensus 113 ~~g------v~~~~~~~~~P~~~lid~~G~i----~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 113 DYG------VLKTDEGIAYRGLFIIDGKGVL----RQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp HTT------CEETTTTEECEEEEEECTTSBE----EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CccCCCCceeeEEEEECCCCcE----EEEEeCCCCCCCCHHHHHHHHHhc
Confidence 666 77 799888884 4433 223334 45788899888765
No 244
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.11 E-value=2.1e-05 Score=68.26 Aligned_cols=97 Identities=11% Similarity=0.123 Sum_probs=68.0
Q ss_pred CCCcEEEEEecCCCc-cccccHHHHHHHHHHhhcc---ceEEEEEcccc----hhhhHHHhhCCCCc-------------
Q 014549 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELGDI----RLATHLAERKPIGQ------------- 210 (423)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~~~p~~~~~A~~l~~~---~~~~~Vdc~~~----~~~~~l~~~~~~~~------------- 210 (423)
.+++++|.||++||+ .|....|.+.++.+.+... +.|..|+++.. ......++++++..
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~ 111 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSE 111 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHH
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHH
Confidence 467899999999999 9999999999999988764 78999998621 12233455554321
Q ss_pred ------------------cccccCccEEEEeC-CCCCCCCCcccccCCC--CHHHHHHHHHHh
Q 014549 211 ------------------IFFRRGLPSLVAFP-PGCKSSDCMTRFEGEL--SVDAVTDWFATA 252 (423)
Q Consensus 211 ------------------~~~i~~~Pti~~f~-~g~~~~~~~~~y~G~~--~~~~l~~fi~~~ 252 (423)
.+.+.+.|+++++- +|.. ...|.|.. +.++|.+.+.+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i----~~~~~g~~~~~~~~l~~~l~~l 170 (174)
T 1xzo_A 112 IEEFALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKV----LKDYNGVENTPYDDIISDVKSA 170 (174)
T ss_dssp HHHHHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEE----EEEEESSSSCCHHHHHHHHHHH
T ss_pred HHHHHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeE----EEEEcCCCCCCHHHHHHHHHHH
Confidence 02356788866664 4443 34566765 578898888765
No 245
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.10 E-value=1.5e-06 Score=65.94 Aligned_cols=72 Identities=11% Similarity=0.141 Sum_probs=49.2
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y 236 (423)
++.|+++||++|+++.+.+++. .+.+..+|.++++...+..++++ +.++|++. .+|.. .
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~------~i~~~~vdi~~~~~~~~~~~~~g------~~~vP~~~--~~g~~-------~ 61 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR------GFDFEMINVDRVPEAAEALRAQG------FRQLPVVI--AGDLS-------W 61 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CCSSCEEE--ETTEE-------E
T ss_pred EEEEcCCCChhHHHHHHHHHHC------CCCeEEEECCCCHHHHHHHHHhC------CCccCEEE--ECCEE-------E
Confidence 5789999999999999888753 26788899986544333334577 88999983 35522 2
Q ss_pred cCCCCHHHHHHHHH
Q 014549 237 EGELSVDAVTDWFA 250 (423)
Q Consensus 237 ~G~~~~~~l~~fi~ 250 (423)
|..+.+.|.+++.
T Consensus 62 -~g~~~~~l~~~l~ 74 (81)
T 1h75_A 62 -SGFRPDMINRLHP 74 (81)
T ss_dssp -ESCCHHHHGGGSC
T ss_pred -ecCCHHHHHHHHh
Confidence 3345666666553
No 246
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.06 E-value=7.1e-07 Score=80.42 Aligned_cols=44 Identities=14% Similarity=0.107 Sum_probs=40.4
Q ss_pred CCCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEccc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELGD 195 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~~ 195 (423)
+.++++|+||++||+||+++.|.| +++++.+.+.++|.+++.+.
T Consensus 112 ~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~ 158 (197)
T 1un2_A 112 AGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNF 158 (197)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSS
T ss_pred CCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCc
Confidence 467899999999999999999999 99999998889999999874
No 247
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.05 E-value=9.3e-06 Score=68.71 Aligned_cols=96 Identities=14% Similarity=0.158 Sum_probs=69.0
Q ss_pred cccchhhhhhhhhcCCCceEEEEEe-cCCCC-----CchHHHHHHHhcccc-ceEEEEEccccccHHHHhhcCCCCCCeE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFS-KTGER-----ASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAI 334 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~-~~~~~-----~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~l~~~f~v~~~Ptl 334 (423)
+++.+ +++++.+. .+++++|. +.+.| ..|.+..+|.+|.+. +.|+.|++.+ .++++.+|+|.+.||+
T Consensus 22 ~t~~~-F~~~v~~~---~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvDe--~~~lA~~ygV~sIPTl 95 (140)
T 2qgv_A 22 VSESR-LDDWLTQA---PDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQ--SEAIGDRFGAFRFPAT 95 (140)
T ss_dssp CCHHH-HHHHHHTC---SSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHHH--HHHHHHHHTCCSSSEE
T ss_pred CCHHH-HHHHHhCC---CCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECCC--CHHHHHHcCCccCCEE
Confidence 55555 55555422 24555554 22222 578889999999888 8988886443 4789999999999999
Q ss_pred EEecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
++||+|... -...|..+.+.|.+||+++.
T Consensus 96 ilFk~G~~v-~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 96 LVFTGGNYR-GVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp EEEETTEEE-EEEESCCCHHHHHHHHHHHH
T ss_pred EEEECCEEE-EEEecCCCHHHHHHHHHHHh
Confidence 999976543 34478888899999998754
No 248
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.03 E-value=8.5e-06 Score=60.44 Aligned_cols=71 Identities=8% Similarity=0.003 Sum_probs=49.8
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRF 236 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y 236 (423)
++.|+++||++|+++.+.+++. .+.+..+|.++++...+..++++ +.++|++.. +|. ..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~di~~~~~~~~~~~~~~------~~~vP~l~~--~g~-------~~ 61 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA------GLAYNTVDISLDDEARDYVMALG------YVQAPVVEV--DGE-------HW 61 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCCEEEETTTCHHHHHHHHHTT------CBCCCEEEE--TTE-------EE
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHcC------CCccCEEEE--CCe-------EE
Confidence 5779999999999999888754 26778889885543222224678 889999874 442 23
Q ss_pred cCCCCHHHHHHHH
Q 014549 237 EGELSVDAVTDWF 249 (423)
Q Consensus 237 ~G~~~~~~l~~fi 249 (423)
|..+.+.|.+++
T Consensus 62 -~g~~~~~l~~~l 73 (75)
T 1r7h_A 62 -SGFRPERIKQLQ 73 (75)
T ss_dssp -ESCCHHHHHHHH
T ss_pred -cCCCHHHHHHHH
Confidence 335677777775
No 249
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.03 E-value=1.4e-05 Score=72.95 Aligned_cols=90 Identities=13% Similarity=0.067 Sum_probs=67.3
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchh-------------------------hhHHHhh
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRL-------------------------ATHLAER 205 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~-------------------------~~~l~~~ 205 (423)
+++++|.|| ++||+.|+...|.+.+++++++. .+.|..|+++.... ...+++.
T Consensus 56 Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ 135 (220)
T 1zye_A 56 GKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRD 135 (220)
T ss_dssp TSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHH
Confidence 489999999 99999999999999999999975 47888888873211 2346666
Q ss_pred CCCCcccccc------CccEEEEeC-CCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 206 KPIGQIFFRR------GLPSLVAFP-PGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 206 ~~~~~~~~i~------~~Pti~~f~-~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
|+ +. .+|+++++- +|.. ...+.| .++.+++.+.+...
T Consensus 136 yg------v~~~~~g~~~P~~~liD~~G~I----~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 136 YG------VLLEGPGLALRGLFIIDPNGVI----KHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp TT------CEETTTTEECEEEEEECTTSBE----EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hC------CeecCCCcccceEEEECCCCEE----EEEEecCCCCCCCHHHHHHHHHHh
Confidence 66 87 899999994 4543 122233 35778888888765
No 250
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.02 E-value=2e-05 Score=65.83 Aligned_cols=108 Identities=11% Similarity=0.115 Sum_probs=72.1
Q ss_pred CCceeecccchhhhhhhhhcCCCceEEEEEecCCCC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCC--C
Q 014549 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES--A 331 (423)
Q Consensus 256 ~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~--~ 331 (423)
.|....+|.++ ++.++++. ..++|.|++.+++| ..|.+..+|.+|++.+.|+.++..+ .+.++++|||.+ .
T Consensus 5 ~plv~~~t~~~-f~~~~~~~--~pv~v~f~a~~~~c~~~~p~l~~~A~~~~gk~~f~~vd~d~--~~~~a~~~gi~~~~i 79 (133)
T 2djk_A 5 SPLIGEIGPET-YSDYMSAG--IPLAYIFAETAEERKELSDKLKPIAEAQRGVINFGTIDAKA--FGAHAGNLNLKTDKF 79 (133)
T ss_dssp CCCSEECCHHH-HHHHHHTT--SCEEEEECSCSSSHHHHHHHHHHHHHSSTTTSEEEEECTTT--TGGGTTTTTCCSSSS
T ss_pred cCceeccChHH-HHHHhcCC--CCEEEEEecChhhHHHHHHHHHHHHHHhCCeEEEEEEchHH--hHHHHHHcCCCcccC
Confidence 34444456555 34444322 12444455543333 3577788999999899999987543 357999999998 9
Q ss_pred CeEEEecCCCcceeEec--CCCChhHHHHHHHhhccccC
Q 014549 332 PAIVFLKDPGVKPVVYY--GSFNNSRLSEVMEQNKLQEL 368 (423)
Q Consensus 332 Ptl~lfk~~~~~~~~y~--g~~~~~~l~~fi~~~~~~~l 368 (423)
|++++|+..+.+...+. |.++.+.|.+||++..-..+
T Consensus 80 Ptl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl 118 (133)
T 2djk_A 80 PAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKI 118 (133)
T ss_dssp SEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCC
T ss_pred CEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCc
Confidence 99999986222223434 88999999999998765555
No 251
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.01 E-value=2.4e-05 Score=72.83 Aligned_cols=98 Identities=17% Similarity=0.105 Sum_probs=72.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEE--ecCCCCCchHHHHHHHhcc---ccceEEEEEccc---cccHHHHhhcCCC--CC
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFF--SKTGERASPFVRQISRNYW---AYASFAFVLWRE---EESSIWWNTFEVE--SA 331 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f--~~~~~~~~~~~~~~a~~~~---~~~~f~~v~~~~---~~~~~l~~~f~v~--~~ 331 (423)
+++.+ ++..+... ..++|.|+ .+.|. ..|.+..+|..|. ..+.|+.|...+ .+.++++++|+|. ++
T Consensus 21 Lt~~n-F~~vi~~~--~~vlV~Fy~~ApWCg-l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~ 96 (248)
T 2c0g_A 21 LDELS-FEKTVERF--PYSVVKFDIASPYGE-KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNF 96 (248)
T ss_dssp CCTTT-HHHHHTTS--SEEEEEEEESSCCSH-HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSC
T ss_pred CCHHH-HHHHHhcC--CCEEEEEECCCCCCc-cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCC
Confidence 56655 44455432 23566677 56555 7888888998874 367788886544 1147899999999 99
Q ss_pred CeEEEecCCC-cceeEe--cCCCChhHHHHHHHhhc
Q 014549 332 PAIVFLKDPG-VKPVVY--YGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 332 Ptl~lfk~~~-~~~~~y--~g~~~~~~l~~fi~~~~ 364 (423)
|||++|+ +. ..+..| .|..+.+.|.+||+++.
T Consensus 97 PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~ 131 (248)
T 2c0g_A 97 PSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANT 131 (248)
T ss_dssp CEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHS
T ss_pred CeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhh
Confidence 9999999 66 457888 89999999999999864
No 252
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.01 E-value=3.3e-05 Score=61.99 Aligned_cols=97 Identities=22% Similarity=0.237 Sum_probs=64.4
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+... .++++++ |+++.+ ....|.+..++..+. .+.|+.|... +.++++++|+|.+.||+++|
T Consensus 5 i~~~~~f~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~-~~~~~~vd~d--~~~~l~~~~~V~~~PT~~~~ 80 (105)
T 3zzx_A 5 VKDQEDFTKQLNEA-GNKLVVIDFYATWCGPCKMIAPKLEELSQSMS-DVVFLKVDVD--ECEDIAQDNQIACMPTFLFM 80 (105)
T ss_dssp CCSHHHHHHHHHHT-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TEEEEEEETT--TCHHHHHHTTCCBSSEEEEE
T ss_pred eCCHHHHHHHHHhc-CCCEEEEEEECCCCCCccCCCcchhhhhhccC-CeEEEEEecc--cCHHHHHHcCCCeecEEEEE
Confidence 44444456666543 3456555 555432 224577777887764 4567766533 24789999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
++|. .-..+.| .+.+.|.+||++|+
T Consensus 81 ~~G~-~v~~~~G-~~~~~l~~~i~k~K 105 (105)
T 3zzx_A 81 KNGQ-KLDSLSG-ANYDKLLELVEKNK 105 (105)
T ss_dssp ETTE-EEEEEES-CCHHHHHHHHHHHC
T ss_pred ECCE-EEEEEeC-cCHHHHHHHHHhcC
Confidence 8653 3334567 58899999999875
No 253
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.00 E-value=1.4e-05 Score=71.09 Aligned_cols=91 Identities=14% Similarity=0.078 Sum_probs=66.5
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh-------------------------hhHHHh
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL-------------------------ATHLAE 204 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~-------------------------~~~l~~ 204 (423)
.+++++|.|| ++||++|+...|.+.++++++++. +.|..|+++.... ...+++
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 109 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIAR 109 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHH
Confidence 4578999999 999999999999999999998754 7888888863211 234666
Q ss_pred hCCCCcccccc-----CccEEEEe-CCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRR-----GLPSLVAF-PPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~-----~~Pti~~f-~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|+ +. .+|+++++ ++|.. ...+.| .++.+++.+.+.+.
T Consensus 110 ~~g------v~~~~g~~~P~~~liD~~G~i----~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 110 SYD------VLFNESVALRAFVLIDKQGVV----QHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp HTT------CEETTTEECCEEEEECTTSBE----EEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred HhC------CcCcCCceeeEEEEEcCCCEE----EEEEeCCCCCCCCHHHHHHHHHHH
Confidence 666 88 89999999 45543 223334 34578888877654
No 254
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.00 E-value=2.2e-05 Score=70.44 Aligned_cols=93 Identities=8% Similarity=-0.087 Sum_probs=64.2
Q ss_pred CCCcEEEEEecCCCcc-ccccHHHHHHHHHHhhc----cceEEEEEcccc-------------------------hhhhH
Q 014549 152 DSKPWLIQVYSDGSYL-CGQFSGAWKTIAALLEG----IANTGMVELGDI-------------------------RLATH 201 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~-C~~~~p~~~~~A~~l~~----~~~~~~Vdc~~~-------------------------~~~~~ 201 (423)
.+++++|.||++||++ |....|.+.++.+.+.. .+.|..|+++.. .....
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~ 119 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDPARDSPAVLKEYLSDFHPSILGLTGTFDEVKN 119 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCTTTCCHHHHHHHHTTSCTTCEEEECCHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCCCCCCHHHHHHHHHHcCCCceEEeCCHHHHHH
Confidence 3679999999999998 99999999998887763 478888887731 01234
Q ss_pred HHhhCCCCcccccc-Cc---------------cEEEE-eCCCCCCCCCcccccCCCCHHHHHHHHHHhhc
Q 014549 202 LAERKPIGQIFFRR-GL---------------PSLVA-FPPGCKSSDCMTRFEGELSVDAVTDWFATAIL 254 (423)
Q Consensus 202 l~~~~~~~~~~~i~-~~---------------Pti~~-f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~~~ 254 (423)
+++.|+ |. +. |++++ -++|.. ...|.|..+.+.+.+.+.+.+.
T Consensus 120 ~~~~~g------v~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i----~~~~~g~~~~~~~~~~i~~~l~ 179 (200)
T 2b7k_A 120 ACKKYR------VYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQF----VDALGRNYDEKTGVDKIVEHVK 179 (200)
T ss_dssp HHHHTT------C--------------CTTTCCCEEEECTTSCE----EEEECTTCCTTHHHHHHHHHHH
T ss_pred HHHHcC------cEEeeccccCCCCCceeeecceEEEECCCCcE----EEEeCCCCCHHHHHHHHHHHHH
Confidence 667777 44 23 35444 455654 3456677777888888777643
No 255
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=97.98 E-value=1.2e-05 Score=71.67 Aligned_cols=44 Identities=9% Similarity=0.017 Sum_probs=38.5
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~ 194 (423)
.+.++.+|.||++||++|+++.|.++++++.+.+.+.+..++..
T Consensus 23 ~~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~ 66 (195)
T 3hd5_A 23 TPGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIA 66 (195)
T ss_dssp STTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECC
T ss_pred CCCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEecc
Confidence 45788999999999999999999999999988777777777764
No 256
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=97.91 E-value=1.8e-05 Score=70.97 Aligned_cols=91 Identities=10% Similarity=0.029 Sum_probs=66.4
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhh-------------------------hHHHhh
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAER 205 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~-------------------------~~l~~~ 205 (423)
+++++|.|| ++||+.|+...|.+.++++++++. +.|..|+++..... ..+++.
T Consensus 36 gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ 115 (202)
T 1uul_A 36 GKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKS 115 (202)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHH
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHH
Confidence 578999999 999999999999999999999764 78888988742222 234555
Q ss_pred CCCCcccccc------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 206 KPIGQIFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 206 ~~~~~~~~i~------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
|+ +. ++|+++++-++... ...+.| .++.++|.+.+.+.
T Consensus 116 yg------v~~~~~g~~~P~~~lid~~G~i---~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 116 YG------VLKEEDGVAYRGLFIIDPKQNL---RQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp HT------CEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cC------CccCCCCceeeEEEEECCCCEE---EEEEeCCCCCCCCHHHHHHHHHHh
Confidence 55 88 89998888544331 222323 35678888888765
No 257
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.91 E-value=1.3e-05 Score=71.30 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=35.5
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc 193 (423)
+.++.+|+|+++||++|+++.|.++++.+.+.+.+.+-.+..
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 578899999999999999999999999998876666655543
No 258
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=97.89 E-value=5e-05 Score=62.48 Aligned_cols=98 Identities=15% Similarity=0.087 Sum_probs=65.4
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhcc-----ccceEEEEEccccccHHHHhhcCCCCCCe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYW-----AYASFAFVLWREEESSIWWNTFEVESAPA 333 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~-----~~~~f~~v~~~~~~~~~l~~~f~v~~~Pt 333 (423)
++..+ ++..+.. ....++|.|+++.+ ....|.+..++..+. ..+.|+.+... +...++++|+|.++||
T Consensus 20 l~~~~-f~~~~~~-~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~--~~~~l~~~~~v~~~Pt 95 (127)
T 3h79_A 20 LTDET-FDSIVMD-PEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGE--KYPDVIERMRVSGFPT 95 (127)
T ss_dssp CCTTT-HHHHHTC-TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETT--TCHHHHHHTTCCSSSE
T ss_pred CChhh-HHHHHhC-CCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEcc--ccHhHHHhcCCccCCE
Confidence 56555 4444432 11224555555432 224566777776543 34666666432 2478999999999999
Q ss_pred EEEecCCCcc-eeEecCCCChhHHHHHHHhh
Q 014549 334 IVFLKDPGVK-PVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 334 l~lfk~~~~~-~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++|+++... +..|.|..+.+.|.+||+++
T Consensus 96 ~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 96 MRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp EEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred EEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 9999887653 47889999999999999875
No 259
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.88 E-value=1.4e-05 Score=74.13 Aligned_cols=89 Identities=10% Similarity=0.047 Sum_probs=61.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc-------------------------------------
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG------------------------------------- 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~------------------------------------- 194 (423)
+.+..++.|+++||++|+++.|..+++.+. +.++|..+...
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g~v~v~~~~~p~~~~~s~~~a~a~~~a~d~~~~~~~~~~~~~~~~l~~ 173 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVDS--GKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQQYEASGGKLKLNV 173 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHT--TSEEEEEEECCCSSTTHHHHHHHHHHSSSHHHHHHHHHHTTTCCCCCC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHhC--CcEEEEEEECCcCCCcHHHHHHHHHHccCHHHHHHHHHHHhccCCCCc
Confidence 456789999999999999999998887664 44554433321
Q ss_pred ----------cchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 195 ----------DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 195 ----------~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.-.....+++++| |+++||+++...+.. .....|..+.+.|.+++.+.
T Consensus 174 ~~~~~~~~~~~v~~~~~l~~~~g------v~gtPt~vi~~~~G~----~~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 174 PANVSTEQMKVLSDNEKLMDDLG------ANVTPAIYYMSKENT----LQQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHT------CCSSCEEEEEETTTE----EEEEESSCCHHHHHHHTTC-
T ss_pred cccCCHHHHHHHHHHHHHHHHcC------CCCCCEEEEECCCCC----EEEecCCCCHHHHHHHHHHH
Confidence 0001234667777 999999999753222 12567989999999887654
No 260
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.88 E-value=5.8e-05 Score=65.16 Aligned_cols=91 Identities=13% Similarity=-0.027 Sum_probs=62.8
Q ss_pred CCCcEEEEEecCC-CccccccHHHHHHHHHHhhccceEEEEEcccchh--------------------hhHHHhhCCCCc
Q 014549 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL--------------------ATHLAERKPIGQ 210 (423)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~--------------------~~~l~~~~~~~~ 210 (423)
.+++++|.||++| |++|+...|.+.++++++ ..+.+..|+++.... ...+++.|+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--- 118 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFG--- 118 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTT---
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhC---
Confidence 3679999999999 999999999999999999 667888888773221 234555555
Q ss_pred cccccC------ccEEEEeCCCCCCCCCcccccC-----CCCHHHHHHHHHHh
Q 014549 211 IFFRRG------LPSLVAFPPGCKSSDCMTRFEG-----ELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~~------~Pti~~f~~g~~~~~~~~~y~G-----~~~~~~l~~fi~~~ 252 (423)
+.. .|+.+++-++... ...+.| ..+.+++++.+.+.
T Consensus 119 ---v~~~~~g~~~p~~~lid~~G~i---~~~~~g~~~~~~~~~~~l~~~l~~l 165 (167)
T 2jsy_A 119 ---VYIKELRLLARSVFVLDENGKV---VYAEYVSEATNHPNYEKPIEAAKAL 165 (167)
T ss_dssp ---CBBTTTCSBCCEEEEECTTSCE---EEEEECSBTTSCCCSHHHHHHHHHH
T ss_pred ---CccccCCceeeEEEEEcCCCcE---EEEEecCCcCCCCCHHHHHHHHHHh
Confidence 554 4888777543331 233433 22457788777654
No 261
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.86 E-value=0.00013 Score=59.94 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=61.7
Q ss_pred eEEEEEecC---CCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHH
Q 014549 280 VKVIFFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (423)
Q Consensus 280 ~~vl~f~~~---~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l 356 (423)
++|.|+++. +....|.+..++..+.+.+.|+.+.... ...++++|+|.++|++++|+++......|.|..+.+.|
T Consensus 38 ~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l 115 (130)
T 2dml_A 38 WLVEFYAPWCGHCQRLTPEWKKAATALKDVVKVGAVNADK--HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAI 115 (130)
T ss_dssp EEEEEECTTCSTTGGGHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHH
T ss_pred EEEEEECCCCHHHHhhCHHHHHHHHHhcCceEEEEEeCCC--CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHH
Confidence 455555542 2334577788888887777777776432 36799999999999999998776656778999999999
Q ss_pred HHHHHhh
Q 014549 357 SEVMEQN 363 (423)
Q Consensus 357 ~~fi~~~ 363 (423)
.+|+.+.
T Consensus 116 ~~~l~~~ 122 (130)
T 2dml_A 116 VDAALSA 122 (130)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 262
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.85 E-value=4.9e-06 Score=66.38 Aligned_cols=69 Identities=12% Similarity=0.123 Sum_probs=47.4
Q ss_pred cccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch----hhhHHHhhCCCCccccccCccEEE
Q 014549 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 146 f~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~----~~~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
+++++.+.. ++.|+++||++|+++.+.+++++.... .+..+|.+++. ....+++.++ +.++|++
T Consensus 5 ~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~~~~~---~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP~i- 72 (105)
T 1kte_A 5 VNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLPFKEG---LLEFVDITATSDTNEIQDYLQQLTG------ARTVPRV- 72 (105)
T ss_dssp HHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSCBCTT---SEEEEEGGGSTTHHHHHHHHHHHHS------CCCSCEE-
T ss_pred HHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcCCCCC---ccEEEEccCCCCHHHHHHHHHHHhC------CCCcCeE-
Confidence 344554443 677999999999999999887643322 17778887542 1235778888 8899997
Q ss_pred EeCCCC
Q 014549 222 AFPPGC 227 (423)
Q Consensus 222 ~f~~g~ 227 (423)
|.+|.
T Consensus 73 -~~~g~ 77 (105)
T 1kte_A 73 -FIGKE 77 (105)
T ss_dssp -EETTE
T ss_pred -EECCE
Confidence 34553
No 263
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=97.83 E-value=0.00025 Score=65.29 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=42.5
Q ss_pred CCCcEEEEEe-cCCCcccc-ccHHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~~~p~~~~~A~~l~~~-~-~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.+++++|.|| +.||+.|. .-.|.+.++++++++. + .|..|+.+........+++++
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~ 91 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEK 91 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcC
Confidence 3568899999 99999999 8999999999998754 6 788888764333344455544
No 264
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.80 E-value=4.1e-05 Score=69.53 Aligned_cols=92 Identities=12% Similarity=0.031 Sum_probs=65.8
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchh-------------------------hhHHHh
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRL-------------------------ATHLAE 204 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~-------------------------~~~l~~ 204 (423)
.+++++|.|| ++||+.|+...|.+.+++++++. .+.|..|+++.... ...+++
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 130 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISK 130 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHH
Confidence 4578999999 99999999999999999999975 37888888763211 234556
Q ss_pred hCCCCcccccc-----CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRR-----GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~-----~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|+ +. ..|+++++-++... ...+.| .++.++|.+.+...
T Consensus 131 ~yg------v~~~~g~~~p~~~lID~~G~i---~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 131 DYN------VLFDDSVSLRAFVLIDMNGIV---QHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp HTT------CEETTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HhC------CccccCCcccEEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 666 87 78988888544332 222223 35688888888655
No 265
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.80 E-value=6.6e-05 Score=63.72 Aligned_cols=98 Identities=13% Similarity=0.149 Sum_probs=60.3
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecC-----CCCCchHHHHHHHhccccce--EEEEEccccccHHHHhhcCCCCCCeE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKT-----GERASPFVRQISRNYWAYAS--FAFVLWREEESSIWWNTFEVESAPAI 334 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~-----~~~~~~~~~~~a~~~~~~~~--f~~v~~~~~~~~~l~~~f~v~~~Ptl 334 (423)
+++++ +++++.... .++|.|+... +....|.+..++.+| +.+. |+.|+..+ .++++++|+|.+.||+
T Consensus 22 l~~~~-f~~~i~~~~--~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~v~~~~~~Vd~d~--~~~la~~~~V~~iPT~ 95 (142)
T 2es7_A 22 VEAST-VDDWIKRVG--DGVILLSSDPRRTPEVSDNPVMIAELLREF-PQFDWQVAVADLEQ--SEAIGDRFNVRRFPAT 95 (142)
T ss_dssp CCCC---------CC--SEEEEECCCSCC----CCHHHHHHHHHHTC-TTSCCEEEEECHHH--HHHHHHTTTCCSSSEE
T ss_pred ccccc-HHHHHHhCC--CEEEEEECCCCCCccHHHHHHHHHHHHHHh-cccceeEEEEECCC--CHHHHHhcCCCcCCeE
Confidence 55544 566665432 2444443321 223568888899888 7777 77775332 3689999999999999
Q ss_pred EEecCCCcceeEecCCCChhHHHHHHHhhccc
Q 014549 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 366 (423)
++|++|. ....+.|..+.+.|.+||++..-.
T Consensus 96 ~~fk~G~-~v~~~~G~~~~~~l~~~i~~~l~~ 126 (142)
T 2es7_A 96 LVFTDGK-LRGALSGIHPWAELLTLMRSIVDT 126 (142)
T ss_dssp EEESCC-----CEESCCCHHHHHHHHHHHHC-
T ss_pred EEEeCCE-EEEEEeCCCCHHHHHHHHHHHhcc
Confidence 9997653 344568988989999999986443
No 266
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.78 E-value=5.6e-05 Score=69.04 Aligned_cols=92 Identities=11% Similarity=0.026 Sum_probs=65.4
Q ss_pred CCCcEEEEEec-CCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhh-------------------------hHHHh
Q 014549 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-------------------------THLAE 204 (423)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~-------------------------~~l~~ 204 (423)
.+++++|.||+ .||+.|....|.+.++.+++++. +.|..|+++..... ..+++
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~ 147 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISK 147 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHH
Confidence 46789999996 99999999999999999999865 78888988743222 23445
Q ss_pred hCCCCcccccc------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 205 RKPIGQIFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 205 ~~~~~~~~~i~------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|+ +. .+|+.+++-+.... ...+.| .+..+++++.+...
T Consensus 148 ~yg------v~~~~~g~~~P~~~lID~~G~I---~~~~~g~~~~~~~~~~il~~l~~l 196 (222)
T 3ztl_A 148 AYG------VFDEEDGNAFRGLFIIDPNGIL---RQITINDKPVGRSVDETLRLLDAF 196 (222)
T ss_dssp HTT------CBCTTTSSBCEEEEEECTTSEE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HcC------CeecCCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 555 77 78999998544332 223333 24577777777543
No 267
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.76 E-value=4.4e-05 Score=65.57 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=62.7
Q ss_pred CCcEEEEEec-CCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCCC------------ccccccC--
Q 014549 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPIG------------QIFFRRG-- 216 (423)
Q Consensus 153 ~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~~------------~~~~i~~-- 216 (423)
+++++|.||+ .||+.|....|.+.++.+++++. +.+..|+++........++++++. ..|++..
T Consensus 35 gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 114 (163)
T 3gkn_A 35 GHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEK 114 (163)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEE
T ss_pred CCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCcccc
Confidence 5589999998 99999999999999999999865 688888887332233333333321 1222555
Q ss_pred ----------ccEEEEeCCCCCCCCCcccccC---CCCHHHHHHHHHH
Q 014549 217 ----------LPSLVAFPPGCKSSDCMTRFEG---ELSVDAVTDWFAT 251 (423)
Q Consensus 217 ----------~Pti~~f~~g~~~~~~~~~y~G---~~~~~~l~~fi~~ 251 (423)
.|+.+++-++... ...|.| ....+++++.+.+
T Consensus 115 ~~~~~~~~~~~p~~~lid~~G~i---~~~~~~~~~~~~~~~il~~l~~ 159 (163)
T 3gkn_A 115 NMYGKQVLGIERSTFLLSPEGQV---VQAWRKVKVAGHADAVLAALKA 159 (163)
T ss_dssp EETTEEEEEECCEEEEECTTSCE---EEEECSCCSTTHHHHHHHHHHH
T ss_pred ccccccccCcceEEEEECCCCeE---EEEEcCCCcccCHHHHHHHHHH
Confidence 8999998554432 223433 2345666666654
No 268
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.75 E-value=9.1e-05 Score=65.75 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=34.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEE
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vd 192 (423)
+.++.++.|+++||++|+.+.|.+.++.+.+.+.+.+-.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p 61 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH 61 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEE
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEec
Confidence 46788999999999999999999999998876655555554
No 269
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.68 E-value=6.1e-05 Score=64.57 Aligned_cols=93 Identities=6% Similarity=0.001 Sum_probs=57.4
Q ss_pred CcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCC------------ccccccCcc--
Q 014549 154 KPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIG------------QIFFRRGLP-- 218 (423)
Q Consensus 154 ~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~------------~~~~i~~~P-- 218 (423)
.+++|.|| +.||+.|....|.+.++.++++....|..|+++........++++++. ..|++...|
T Consensus 36 ~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~p~~ 115 (159)
T 2a4v_A 36 RVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADSVTSQKKFQSKQNLPYHLLSDPKREFIGLLGAKKTPLS 115 (159)
T ss_dssp SEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCCHHHHHHHHHHHTCSSEEEECTTCHHHHHHTCBSSSSS
T ss_pred CeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHhCCCceEEECCccHHHHHhCCcccccC
Confidence 46888887 899999999999999999998754377777776332222233332221 223377888
Q ss_pred -----EEEEeCCCCCCCCCcccccCCCCH---HHHHHHHHH
Q 014549 219 -----SLVAFPPGCKSSDCMTRFEGELSV---DAVTDWFAT 251 (423)
Q Consensus 219 -----ti~~f~~g~~~~~~~~~y~G~~~~---~~l~~fi~~ 251 (423)
++++ ++|.. ...+.|.... +.+++-+.+
T Consensus 116 g~~~~~~li-~~G~i----~~~~~g~~~~~~~~~~~~~l~~ 151 (159)
T 2a4v_A 116 GSIRSHFIF-VDGKL----KFKRVKISPEVSVNDAKKEVLE 151 (159)
T ss_dssp CBCCEEEEE-ETTEE----EEEEESCCHHHHHHHHHHHHHH
T ss_pred CccceEEEE-cCCEE----EEEEccCCccccHHHHHHHHHH
Confidence 5666 77754 2344564432 344444433
No 270
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=97.67 E-value=0.00012 Score=66.87 Aligned_cols=98 Identities=8% Similarity=-0.001 Sum_probs=67.1
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhc-cceEEEEEcccchhhhHHHhhC-------CCC------------c
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEG-IANTGMVELGDIRLATHLAERK-------PIG------------Q 210 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~-~~~~~~Vdc~~~~~~~~l~~~~-------~~~------------~ 210 (423)
.+++++|.|| +.||+.|....|.+.++.++++. .+.|..|+++........++++ ++. .
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~ 134 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISK 134 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSEEEECTTSHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhhhhcCccCCceEEEECCchHHHH
Confidence 4578999999 99999999999999999999875 3688888887433333445544 221 2
Q ss_pred cccc-----cCccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 211 IFFR-----RGLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i-----~~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|++ ...|+.+++-+.... ...+.| .++.++|.+.+.+.
T Consensus 135 ~ygv~~~~g~~~P~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 135 NYNVLYDNSFALRGLFIIDKNGCV---RHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp HTTCEETTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCcccCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 3446 357999988654432 122223 35788888888665
No 271
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.63 E-value=0.00031 Score=55.36 Aligned_cols=95 Identities=14% Similarity=0.234 Sum_probs=64.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.++ ++..+.+. +++++ |+++.+ ....+.+..++..+.+.+.|+.+... ..+.++++|++.+.|++++|
T Consensus 9 l~~~~-~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~i~~~Pt~~~~ 82 (109)
T 3tco_A 9 LTEEN-FDEVIRNN---KLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGKAVFGRLNVD--ENQKIADKYSVLNIPTTLIF 82 (109)
T ss_dssp CCTTT-HHHHHHHS---SEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTSEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHHhcC---CeEEEEEECCCCHHHHhhhHHHHHHHHHhCCCceEEEEccc--cCHHHHHhcCcccCCEEEEE
Confidence 55555 45555432 35555 444322 12346667788888777888877643 24789999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
++ +.....+.|..+.+.|.+||++.
T Consensus 83 ~~-g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 83 VN-GQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp ET-TEEEEEEESCCCHHHHHHHHHHH
T ss_pred cC-CcEEEeeeccCCHHHHHHHHHHH
Confidence 64 44445578999999999999874
No 272
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=97.63 E-value=0.00044 Score=62.85 Aligned_cols=42 Identities=10% Similarity=-0.158 Sum_probs=36.9
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~ 194 (423)
.++++||.|||.||+.|+ -.|.++++.+++++. +.|..|+|+
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 367999999999999998 788999999999765 788889886
No 273
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.62 E-value=0.00029 Score=56.44 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=59.8
Q ss_pred eEEE-EEecC---CCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhH
Q 014549 280 VKVI-FFSKT---GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (423)
Q Consensus 280 ~~vl-~f~~~---~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~ 355 (423)
++++ |+++. +....+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|++ +.....+.|..+.+.
T Consensus 19 ~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~~~ 95 (112)
T 2voc_A 19 VVLADFWAPWCGPSKMIAPVLEELDQEMGDKLKIVKIDVDE--NQETAGKYGVMSIPTLLVLKD-GEVVETSVGFKPKEA 95 (112)
T ss_dssp EEEEEEECTTBGGGGGHHHHHHHHHHHHTTTCEEEEEETTT--CCSHHHHTTCCSBSEEEEEET-TEEEEEEESCCCHHH
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCCcccEEEEEeC-CEEEEEEeCCCCHHH
Confidence 5444 55542 2223566777888887677888776433 357999999999999999954 444455789999999
Q ss_pred HHHHHHhhccc
Q 014549 356 LSEVMEQNKLQ 366 (423)
Q Consensus 356 l~~fi~~~~~~ 366 (423)
|.+|+..+.-+
T Consensus 96 l~~~l~~~~~~ 106 (112)
T 2voc_A 96 LQELVNKHLLE 106 (112)
T ss_dssp HHHHHHTTSCS
T ss_pred HHHHHHHHHHh
Confidence 99999885443
No 274
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.59 E-value=0.00019 Score=58.98 Aligned_cols=68 Identities=13% Similarity=0.277 Sum_probs=46.9
Q ss_pred CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 292 ~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..|.+..++..+.+.+.|+.+...+ ...++++|+|.++|++++|+++ .....+.|..+.+.|.+||++
T Consensus 53 ~~p~~~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 120 (123)
T 1oaz_A 53 IAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNG-EVAATKVGALSKGQLKEFLDA 120 (123)
T ss_dssp THHHHTTC-------CEEEEEETTS--CTTTGGGGTCCBSSEEEEEESS-SEEEEEESCCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEECC-EEEEEEeCCCCHHHHHHHHHH
Confidence 3566666777776667777776433 3679999999999999999654 344457899899999999976
No 275
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.58 E-value=0.00054 Score=56.22 Aligned_cols=83 Identities=16% Similarity=0.168 Sum_probs=59.0
Q ss_pred ceEEE-EEecCC---CCCchHHHHHHHhcc----ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC
Q 014549 279 KVKVI-FFSKTG---ERASPFVRQISRNYW----AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (423)
Q Consensus 279 ~~~vl-~f~~~~---~~~~~~~~~~a~~~~----~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~ 350 (423)
+++++ |+++.| ....|.+..++..+. ..+.|+.+.... ...++++|+|.++|++++|++ +.....|.|.
T Consensus 26 ~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-g~~~~~~~G~ 102 (133)
T 1x5d_A 26 DVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPTIKIFQK-GESPVDYDGG 102 (133)
T ss_dssp SEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSEEEEEET-TEEEEEECSC
T ss_pred CeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCeEEEEeC-CCceEEecCC
Confidence 35444 554422 234566777777775 567777765332 367999999999999999987 4455667899
Q ss_pred CChhHHHHHHHhhc
Q 014549 351 FNNSRLSEVMEQNK 364 (423)
Q Consensus 351 ~~~~~l~~fi~~~~ 364 (423)
.+.+.|.+||.+..
T Consensus 103 ~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 103 RTRSDIVSRALDLF 116 (133)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh
Confidence 99999999998853
No 276
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=97.58 E-value=0.00035 Score=60.93 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=35.6
Q ss_pred CCCcEEEEEecCC-CccccccHHHHHHHHHHhhccceEEEEEcc
Q 014549 152 DSKPWLIQVYSDG-SYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapw-C~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~ 194 (423)
.+++++|.||+.| |+.|+...|.+.++.++ ..+.|..|+.+
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D 84 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKD 84 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECC
Confidence 3678999999999 99999999999999988 44778888876
No 277
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.56 E-value=0.00045 Score=56.41 Aligned_cols=99 Identities=15% Similarity=0.122 Sum_probs=66.5
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhccc-cceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.++ +++.+++ .++|.|+++.+ ....|.+..++..+.+ .+.|+.+...+ ...++++|+|.++||+++|
T Consensus 12 l~~~~-f~~~~~~----~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 84 (126)
T 1x5e_A 12 ITDEN-WRELLEG----DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE--QPGLSGRFIINALPTIYHC 84 (126)
T ss_dssp CCTTT-HHHHTSS----EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred ecHHH-HHHHhCC----CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC--CHHHHHHcCCcccCEEEEE
Confidence 55554 3444432 26666666532 2234666667777664 57777775432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhhccccCc
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQNKLQELP 369 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~~~~~lp 369 (423)
+++. ...|.|..+.+.|.+||++.....+.
T Consensus 85 ~~G~--~~~~~G~~~~~~l~~~l~~~~~~~~~ 114 (126)
T 1x5e_A 85 KDGE--FRRYQGPRTKKDFINFISDKEWKSIE 114 (126)
T ss_dssp ETTE--EEECCSCCCHHHHHHHHHTCGGGGSC
T ss_pred eCCe--EEEeecCCCHHHHHHHHHHHhhccCC
Confidence 6543 46788999999999999986544333
No 278
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.56 E-value=0.00032 Score=55.55 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=60.6
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhcc---ccceEEEEEccccccHHHHhhcCCCCCCeEE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYW---AYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~---~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~ 335 (423)
++.++ +++.+.+ ..++|.|+++.+ ....+.+..++..+. ..+.++.+... +...++++|+|.++|+++
T Consensus 10 l~~~~-~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~--~~~~l~~~~~v~~~Pt~~ 83 (111)
T 3uvt_A 10 LTENN-FDDTIAE---GITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCT--AERNICSKYSVRGYPTLL 83 (111)
T ss_dssp CCTTT-HHHHHHS---SEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETT--TCHHHHHHTTCCSSSEEE
T ss_pred cChhh-HHHHhcC---CcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEecc--ccHhHHHhcCCCcccEEE
Confidence 55555 4555542 124444555432 123455566666554 23555555432 247899999999999999
Q ss_pred EecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 336 lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+|+++ .....+.|..+.+.|.+||+++
T Consensus 84 ~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 84 LFRGG-KKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp EEETT-EEEEEECSCCSHHHHHHHHHHH
T ss_pred EEeCC-cEEEeccCCcCHHHHHHHHHhc
Confidence 99754 3445678999999999999874
No 279
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.55 E-value=0.0005 Score=57.10 Aligned_cols=97 Identities=18% Similarity=0.198 Sum_probs=65.1
Q ss_pred cccchhhhhhhhhcCCCceEEEE-EecC---CCCCchHHHHHHHhcccc---ceEEEEEccccccHHHHhhcCCCCCCeE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIF-FSKT---GERASPFVRQISRNYWAY---ASFAFVLWREEESSIWWNTFEVESAPAI 334 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~-f~~~---~~~~~~~~~~~a~~~~~~---~~f~~v~~~~~~~~~l~~~f~v~~~Ptl 334 (423)
++..+ ++..+.. ++++++. +++. |....+.+..++..+.+. +.|+.+... +...++++|+|.++|++
T Consensus 22 l~~~~-~~~~~~~---~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~Pt~ 95 (140)
T 2dj1_A 22 LNDGN-FDNFVAD---KDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDAT--SASMLASKFDVSGYPTI 95 (140)
T ss_dssp CCTTT-HHHHHTT---CSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTT--TCHHHHHHTTCCSSSEE
T ss_pred cChHh-HHHHHhc---CCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCc--ccHHHHHHCCCCccCeE
Confidence 44444 3444432 3355554 4432 233467777777777654 666666432 23789999999999999
Q ss_pred EEecCCCcceeEecCCCChhHHHHHHHhhccc
Q 014549 335 VFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 366 (423)
++|+++. ...|.|..+.+.|.+||++..-+
T Consensus 96 ~~~~~G~--~~~~~g~~~~~~l~~~l~~~~~~ 125 (140)
T 2dj1_A 96 KILKKGQ--AVDYDGSRTQEEIVAKVREVSQP 125 (140)
T ss_dssp EEEETTE--EEECCSCCCHHHHHHHHHHHHSS
T ss_pred EEEECCc--EEEcCCCCCHHHHHHHHHHhcCC
Confidence 9997543 66788999999999999986443
No 280
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.54 E-value=0.00043 Score=54.35 Aligned_cols=83 Identities=18% Similarity=0.253 Sum_probs=57.0
Q ss_pred CceEEEEE-ecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVIFF-SKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl~f-~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++.| ++.+ ....+.+..++..+.+.+.|+.+...+ .+.++++|++.+.|++++|++ +.....+.|..+.
T Consensus 20 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 96 (107)
T 2i4a_A 20 SGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRD-GKVIDKKVGALPK 96 (107)
T ss_dssp SSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCChhHHHHhHHHHHHHHHhCCcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeC-CEEEEEecCCCCH
Confidence 34555544 4322 112455666777776667777776432 367999999999999999964 3344457898899
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.+||+++
T Consensus 97 ~~l~~~l~~~ 106 (107)
T 2i4a_A 97 SQLKAWVESA 106 (107)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999999863
No 281
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.54 E-value=0.00051 Score=53.80 Aligned_cols=96 Identities=21% Similarity=0.241 Sum_probs=61.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+... .++++++ |+++.+ ....+.+..++..+.+ +.|+.+...+ .+.++++|++.+.|++++|
T Consensus 5 i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 80 (105)
T 3m9j_A 5 IESKTAFQEALDAA-GDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASESEVKSMPTFQFF 80 (105)
T ss_dssp CCSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-SEEEEEETTT--CHHHHHHTTCCBSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-eEEEEEEhhh--hHHHHHHcCCCcCcEEEEE
Confidence 33433355555533 2345555 444422 1234566667777754 6777775432 4789999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.|. +.+.|.+||++.
T Consensus 81 ~~g-~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 81 KKG-QKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 654 333456788 889999999863
No 282
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=97.54 E-value=0.00019 Score=64.89 Aligned_cols=97 Identities=13% Similarity=0.020 Sum_probs=65.9
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhC-------CCC------------cc
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PIG------------QI 211 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~-------~~~------------~~ 211 (423)
+++++|.|| +.||+.|..-.|.+.++.++++.. +.|..|+++........++++ ++. ..
T Consensus 48 Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ 127 (211)
T 2pn8_A 48 GKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKD 127 (211)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTSHHHHH
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhccCccCCceEEEECCchHHHHH
Confidence 578999999 999999999999999999998753 788888887433333344433 221 23
Q ss_pred cccc------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 212 FFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 212 ~~i~------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
|++. ..|+.+++-+.... ...+.| .++.+++++.+...
T Consensus 128 ygv~~~~~g~~~p~~~lID~~G~I---~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 128 YGVYLEDSGHTLRGLFIIDDKGIL---RQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp TTCEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred cCCcccCCCcccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 4463 58999988654432 222223 25778888887654
No 283
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.53 E-value=0.0004 Score=54.78 Aligned_cols=68 Identities=15% Similarity=0.299 Sum_probs=51.5
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+.+.+.++.+...+ .+.++++|++.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 39 ~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 39 APILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKNG-EVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp HHHHHHHHHHTTTTEEEEEEETTT--CTTHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEECCC--CHHHHHHcCCcccCEEEEEeCC-EEEEEEecCCCHHHHHHHHHHh
Confidence 466677787877667777775432 3679999999999999999643 3444568988999999999863
No 284
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.53 E-value=0.00034 Score=56.71 Aligned_cols=68 Identities=13% Similarity=0.166 Sum_probs=51.3
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++.++.+.+.|+.+...+ ...++++|+|.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 50 ~~~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 50 GPRLEKMVAKQHGKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKNG-DVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp HHHHHHHHHHTTTSSEEEEEETTT--THHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 455666777776677777776432 3679999999999999999643 3344568888999999999763
No 285
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.53 E-value=0.00054 Score=55.35 Aligned_cols=91 Identities=23% Similarity=0.246 Sum_probs=60.1
Q ss_pred hhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcce
Q 014549 268 GKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKP 344 (423)
Q Consensus 268 ~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~ 344 (423)
+++.+.......++|.|+++.+ ....|.+..++..|.+ +.|+.+...+ ...++++|+|.+.|++++|+++ ...
T Consensus 22 f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G-~~~ 97 (116)
T 3qfa_C 22 FQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-VIFLEVDVDD--CQDVASECEVKSMPTFQFFKKG-QKV 97 (116)
T ss_dssp HHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT-SEEEEEETTT--THHHHHHTTCCSSSEEEEESSS-SEE
T ss_pred HHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHcCCccccEEEEEeCC-eEE
Confidence 5555653222224444555432 2234666777777765 7777775432 4789999999999999999654 334
Q ss_pred eEecCCCChhHHHHHHHhh
Q 014549 345 VVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 345 ~~y~g~~~~~~l~~fi~~~ 363 (423)
..+.|. +.+.|.++|++.
T Consensus 98 ~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 98 GEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp EEEESC-CHHHHHHHHHHH
T ss_pred EEEcCC-CHHHHHHHHHHh
Confidence 456788 889999999863
No 286
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.52 E-value=0.00033 Score=55.54 Aligned_cols=81 Identities=19% Similarity=0.363 Sum_probs=58.5
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHH
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l 356 (423)
++|.|+++.+ ....+.+..++..+.+.+.|+.+...+ .+.++++|+|.+.|++++|+++ .....+.|..+.+.|
T Consensus 25 vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l 101 (111)
T 3gnj_A 25 CLVMFSRKNCHVCQKVTPVLEELRLNYEESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFKDG-EYKGKMAGDVEDDEV 101 (111)
T ss_dssp EEEEEECSSCHHHHHHHHHHHHHHHHTTTTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EEEEEEESSCCHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHcCCceEEEEEECCc--ChhHHHhcCCCcCCEEEEEECC-EEEEEEeccCCHHHH
Confidence 4444555432 223466677888887778888886433 4689999999999999999754 344467899999999
Q ss_pred HHHHHhh
Q 014549 357 SEVMEQN 363 (423)
Q Consensus 357 ~~fi~~~ 363 (423)
.+||++.
T Consensus 102 ~~~l~~~ 108 (111)
T 3gnj_A 102 EQMIADV 108 (111)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 287
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.51 E-value=0.0004 Score=54.46 Aligned_cols=68 Identities=21% Similarity=0.273 Sum_probs=52.8
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+.+.+.|+.+...+ .+.++++|++.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 38 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 38 APVLEELAADYEGKADILKLDVDE--NPSTAAKYEVMSIPTLIVFKDG-QPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSBSEEEEEETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred hHHHHHHHHHhcCCcEEEEEECCc--CHHHHHhCCCcccCEEEEEeCC-eEEEEEeCCCCHHHHHHHHHHh
Confidence 466677888887777887776432 4789999999999999999743 3444678998999999999863
No 288
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=97.51 E-value=0.00027 Score=62.46 Aligned_cols=97 Identities=9% Similarity=-0.053 Sum_probs=66.6
Q ss_pred CCcEEEEEec-CCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhC----CCC------------ccccc
Q 014549 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK----PIG------------QIFFR 214 (423)
Q Consensus 153 ~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~----~~~------------~~~~i 214 (423)
+++++|.||+ .||+.|....|.+.++.++++.. +.|..|+++........++++ ++. ..|++
T Consensus 30 Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~fp~l~D~~~~~~~~ygv 109 (186)
T 1n8j_A 30 GRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDN 109 (186)
T ss_dssp TSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSEEEECTTSHHHHHTTC
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCcccCCceeEEECCchHHHHHhCC
Confidence 5789999995 99999999999999999988753 688888877443334455555 332 23445
Q ss_pred c------CccEEEEeCCCCCCCCCcccccCC----CCHHHHHHHHHHh
Q 014549 215 R------GLPSLVAFPPGCKSSDCMTRFEGE----LSVDAVTDWFATA 252 (423)
Q Consensus 215 ~------~~Pti~~f~~g~~~~~~~~~y~G~----~~~~~l~~fi~~~ 252 (423)
. ..|+.+++-+.... ...+.|. ++.++|.+.+.+.
T Consensus 110 ~~~~~g~~~p~~~lID~~G~i---~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 110 MREDEGLADRATFVVDPQGII---QAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp EETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ccCCCCceeeEEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 5 25999888654432 2233343 3688888888655
No 289
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.51 E-value=0.0005 Score=61.86 Aligned_cols=90 Identities=17% Similarity=0.200 Sum_probs=64.2
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHH
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l 356 (423)
++|.|+++.| ....|.+..++..+.+.+.|+.|...+ ...++++|+|.++||+++|+++ .....+.|..+.+.|
T Consensus 117 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l 193 (210)
T 3apq_A 117 WFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGAVNCGD--DRMLCRMKGVNSYPSLFIFRSG-MAAVKYNGDRSKESL 193 (210)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEECTT-SCCEECCSCCCHHHH
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHHhcCceEEEEEECCc--cHHHHHHcCCCcCCeEEEEECC-CceeEecCCCCHHHH
Confidence 4555655432 223566777888887778888776432 3679999999999999999654 445567899999999
Q ss_pred HHHHHhhccccCcccc
Q 014549 357 SEVMEQNKLQELPQLR 372 (423)
Q Consensus 357 ~~fi~~~~~~~lp~l~ 372 (423)
.+||.+..-..+.+++
T Consensus 194 ~~~i~~~l~~~~~~i~ 209 (210)
T 3apq_A 194 VAFAMQHVRSTVTELS 209 (210)
T ss_dssp HHHHHHHHHCCSSCC-
T ss_pred HHHHHHhCcccceecC
Confidence 9999986555454443
No 290
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.50 E-value=0.00052 Score=54.62 Aligned_cols=82 Identities=13% Similarity=0.195 Sum_probs=57.7
Q ss_pred ceEEE-EEecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChh
Q 014549 279 KVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (423)
Q Consensus 279 ~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~ 354 (423)
+++++ |+++.+ .| ..+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|++ +.....+.|..+.+
T Consensus 26 ~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~-G~~~~~~~g~~~~~ 102 (115)
T 1thx_A 26 QPVLVYFWASWCGPCQLMSPLINLAANTYSDRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKG-EQILDSTEGVISKD 102 (115)
T ss_dssp SCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEET-TEEEEEEESCCCHH
T ss_pred ceEEEEEECCCCHHHHHhHHHHHHHHHHhCCcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcC-CEEEEEecCCCCHH
Confidence 35444 554422 22 3456677788887667888776432 367999999999999999964 33444568988999
Q ss_pred HHHHHHHhh
Q 014549 355 RLSEVMEQN 363 (423)
Q Consensus 355 ~l~~fi~~~ 363 (423)
.|.+||++.
T Consensus 103 ~l~~~l~~~ 111 (115)
T 1thx_A 103 KLLSFLDTH 111 (115)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999874
No 291
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.50 E-value=4.2e-05 Score=62.21 Aligned_cols=66 Identities=6% Similarity=0.109 Sum_probs=46.9
Q ss_pred cccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccce---EEEEEcccch----hhhHHHhhCCCCccccccCcc
Q 014549 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIAN---TGMVELGDIR----LATHLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 146 f~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~---~~~Vdc~~~~----~~~~l~~~~~~~~~~~i~~~P 218 (423)
+++.+.+. .++.|++|||++|+++.+.+++.+ +. +..+|+++++ ....+.+.+| +.++|
T Consensus 12 ~~~~i~~~--~vv~f~~~~Cp~C~~~~~~L~~~~------~~~~~~~~vdi~~~~~~~~~~~~l~~~~g------~~~vP 77 (114)
T 2hze_A 12 VQQRLANN--KVTIFVKYTCPFCRNALDILNKFS------FKRGAYEIVDIKEFKPENELRDYFEQITG------GKTVP 77 (114)
T ss_dssp HHTTCCTT--CEEEEECTTCHHHHHHHHHHTTSC------BCTTSEEEEEGGGSSSHHHHHHHHHHHHS------CCSSC
T ss_pred HHHHhccC--CEEEEEeCCChhHHHHHHHHHHcC------CCcCceEEEEccCCCChHHHHHHHHHHhC------CCCcC
Confidence 33445443 467799999999999998876543 34 8889998553 1246888888 88999
Q ss_pred EEEEeCCCC
Q 014549 219 SLVAFPPGC 227 (423)
Q Consensus 219 ti~~f~~g~ 227 (423)
++++ +|+
T Consensus 78 ~v~i--~g~ 84 (114)
T 2hze_A 78 RIFF--GKT 84 (114)
T ss_dssp EEEE--TTE
T ss_pred EEEE--CCE
Confidence 9743 553
No 292
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.50 E-value=0.00056 Score=54.73 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=64.5
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecC---CCCCchHHHHHHHhccc---cceEEEEEccccccHHHHhhcCCCCCCeE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKT---GERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAI 334 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~---~~~~~~~~~~~a~~~~~---~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl 334 (423)
++.++ ++..+.+. +++++ |+++. +....+.+..++..+.. .+.|+.+...+ ...++++|++.+.|++
T Consensus 12 l~~~~-~~~~~~~~---~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~ 85 (120)
T 1mek_A 12 LRKSN-FAEALAAH---KYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE--ESDLAQQYGVRGYPTI 85 (120)
T ss_dssp CCTTT-HHHHHHHC---SEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT--CCSSHHHHTCCSSSEE
T ss_pred echhh-HHHHHccC---CeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC--CHHHHHHCCCCcccEE
Confidence 55554 34444432 35444 55432 33456777777777653 46666665332 3578999999999999
Q ss_pred EEecCCCc-ceeEecCCCChhHHHHHHHhhc
Q 014549 335 VFLKDPGV-KPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 335 ~lfk~~~~-~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
++|+++.. .+..|.|..+.+.|.+||+++.
T Consensus 86 ~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 86 KFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp EEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred EEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 99976554 2467789999999999998743
No 293
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.50 E-value=9.1e-05 Score=57.09 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=42.2
Q ss_pred EEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhC-CCCccccccCccEEEEeCCC
Q 014549 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK-PIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 156 ~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~-~~~~~~~i~~~Pti~~f~~g 226 (423)
-++.|+++||++|+++.+.+++.. +.+..+|.+ .....++.+.+ + +.++|++.+ +|
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~~------i~~~~vdv~-~~~~~~l~~~~~~------~~~vP~l~~--~g 63 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKKG------VKYTDIDAS-TSLRQEMVQRANG------RNTFPQIFI--GD 63 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHHT------CCEEEECSC-HHHHHHHHHHHHS------SCCSCEEEE--TT
T ss_pred eEEEEECCCChhHHHHHHHHHHcC------CCcEEEECC-HHHHHHHHHHhCC------CCCcCEEEE--CC
Confidence 367899999999999998887652 567778877 33345677877 8 889999843 55
No 294
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.47 E-value=0.001 Score=62.58 Aligned_cols=102 Identities=11% Similarity=0.182 Sum_probs=70.6
Q ss_pred eeecccchhhhhhhhhcCCCceEEEEEec-C--CCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEE
Q 014549 259 IFYYTKESMGKNFLAKTGPHKVKVIFFSK-T--GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIV 335 (423)
Q Consensus 259 ~~~it~~~~~~~fl~~~~~~~~~vl~f~~-~--~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~ 335 (423)
...+|.++ +++.+.......++|.|+.+ + |....|.+..++.++.+.+.|+.|...+ .+.++++|+|.++||++
T Consensus 9 v~~~~~~~-f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~ 85 (287)
T 3qou_A 9 IVNINESN-LQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQFILAKLDCDA--EQMIAAQFGLRAIPTVY 85 (287)
T ss_dssp EEECCTTT-HHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSSSEEEEEETTT--CHHHHHTTTCCSSSEEE
T ss_pred cEECCHHH-HHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCCeEEEEEeCcc--CHHHHHHcCCCCCCeEE
Confidence 33366665 45555432222345556554 2 3446788888998888778888876432 37899999999999999
Q ss_pred EecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 336 FLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 336 lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
+|+++ .....+.|..+.+.+.+|+....
T Consensus 86 ~~~~G-~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 86 LFQNG-QPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp EEETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred EEECC-EEEEEeeCCCCHHHHHHHHHHHc
Confidence 99754 33345789889899999998853
No 295
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=97.46 E-value=0.00086 Score=60.50 Aligned_cols=42 Identities=10% Similarity=-0.189 Sum_probs=36.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~ 194 (423)
.++++||.|||.||+.| .-.|.+.++.+++++. +.|..|+|+
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 36799999999999999 6788999999999765 688888875
No 296
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.44 E-value=0.00042 Score=59.07 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=77.6
Q ss_pred eeeEeccCCcccccCCCCcEEEE-EecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCcccccc
Q 014549 137 AFNVVTSEDFPSIFHDSKPWLIQ-VYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRR 215 (423)
Q Consensus 137 ~v~~L~~~nf~~~v~~~~~~lV~-FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~ 215 (423)
-|.++|.+|...+..+.-+..+. |..+.-..-..+.+.++++|+.++|.+.|+.||.++. ....+.+.+| ++
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~-~~~~~l~~fG------l~ 87 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHT-DNQRILEFFG------LK 87 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCG-GGHHHHHHTT------CC
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchH-hHHHHHHHcC------CC
Confidence 47899999988887766665544 4433344455688999999999999999999998422 3345788899 55
Q ss_pred --CccEEEEeCC-CCCCCCCccccc-CCCCHHHHHHHHHHhh
Q 014549 216 --GLPSLVAFPP-GCKSSDCMTRFE-GELSVDAVTDWFATAI 253 (423)
Q Consensus 216 --~~Pti~~f~~-g~~~~~~~~~y~-G~~~~~~l~~fi~~~~ 253 (423)
..|++.++.. +... ...+. |..+.+.|.+|+.+..
T Consensus 88 ~~~~P~v~i~~~~~~~~---Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 88 KEECPAVRLITLEEEMT---KYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp GGGCSEEEEEECSSSCE---EECCSCCCCCHHHHHHHHHHHH
T ss_pred cccCCEEEEEecccccc---cCCCCcccCCHHHHHHHHHHHH
Confidence 4899999864 2111 11233 7889999999999873
No 297
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.44 E-value=0.00046 Score=56.94 Aligned_cols=83 Identities=14% Similarity=0.312 Sum_probs=58.3
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++ |+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 40 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 116 (128)
T 2o8v_B 40 DGAILVDFWAEWCGPAKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLFKN-GEVAATKVGALSK 116 (128)
T ss_dssp SSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTTEEEEEEETTT--CCTTSGGGTCCSSSEEEEEET-TEEEEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCccCEEEEEeC-CEEEEEEcCCCCH
Confidence 345555 444422 224566777888887667777776433 357999999999999999954 3444457898899
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.+||++.
T Consensus 117 ~~l~~~l~~~ 126 (128)
T 2o8v_B 117 GQLKEFLDAN 126 (128)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 298
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.43 E-value=0.0002 Score=58.09 Aligned_cols=81 Identities=7% Similarity=0.031 Sum_probs=56.1
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC----CC
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----FN 352 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~----~~ 352 (423)
++|.|+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.++|++++|++++. ...+.|. .+
T Consensus 24 ~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~ 100 (122)
T 3aps_A 24 WVVDFYAPWCGPCQNFAPEFELLARMIKGKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERA-KKSIWEEQINSRD 100 (122)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGG-GTEEEEEEECCSC
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhcCCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCc-cceeeccccCcCC
Confidence 4444555422 123466677787877677777776433 367999999999999999976554 3334554 78
Q ss_pred hhHHHHHHHhh
Q 014549 353 NSRLSEVMEQN 363 (423)
Q Consensus 353 ~~~l~~fi~~~ 363 (423)
.+.|.+||++.
T Consensus 101 ~~~l~~~l~~~ 111 (122)
T 3aps_A 101 AKTIAALIYGK 111 (122)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 89999999874
No 299
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.42 E-value=9.9e-05 Score=61.55 Aligned_cols=67 Identities=15% Similarity=0.228 Sum_probs=46.1
Q ss_pred CcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc---hh-hhHHHhhCCCCccccccCccEE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~---~~-~~~l~~~~~~~~~~~i~~~Pti 220 (423)
.+++++.... ++.|+++||++|+++.+.++++. +.+..+|.+.+ +. ...+++.++ +.++|+|
T Consensus 19 ~~~~~i~~~~--vvvf~~~~Cp~C~~~~~~L~~~~------i~~~~vdid~~~~~~~~~~~l~~~~g------~~~vP~l 84 (130)
T 2cq9_A 19 QIQETISDNC--VVIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRI 84 (130)
T ss_dssp HHHHHHHHSS--EEEEECSSCSHHHHHHHHHHHHT------CCCEEEETTTSTTHHHHHHHHHHHHS------SCCSSEE
T ss_pred HHHHHHcCCc--EEEEEcCCChHHHHHHHHHHHcC------CCcEEEECcCCcCcHHHHHHHHHHhC------CCCcCEE
Confidence 3445554443 34499999999999999888753 45667888744 11 124778888 8899998
Q ss_pred EEeCCCC
Q 014549 221 VAFPPGC 227 (423)
Q Consensus 221 ~~f~~g~ 227 (423)
+ .+|.
T Consensus 85 ~--i~G~ 89 (130)
T 2cq9_A 85 F--VNGT 89 (130)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3553
No 300
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.42 E-value=0.00043 Score=59.44 Aligned_cols=99 Identities=8% Similarity=0.105 Sum_probs=66.8
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+.+ ..++++|+ |+++.+ ....|.+..+|.+|.+.+.|+.|.+.+ .++++++|+|.+.||+++|
T Consensus 26 l~t~~~f~~~v~~-~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVDVDe--~~e~a~~y~V~siPT~~fF 102 (160)
T 2av4_A 26 LNSGWAVDQAIVN-EDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVDITE--VPDFNTMYELYDPVSVMFF 102 (160)
T ss_dssp CCSHHHHHHHHHH-CSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTTTTCCSSEEEEEE
T ss_pred cCCHHHHHHHHHh-cCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 4443334444432 12345555 555432 234688888999998888888887654 3689999999999999999
Q ss_pred cCCCccee--------EecCCCC-hhHHHHHHHhh
Q 014549 338 KDPGVKPV--------VYYGSFN-NSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~--------~y~g~~~-~~~l~~fi~~~ 363 (423)
+++....+ ...|..+ .+.|.++|+.+
T Consensus 103 k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 103 YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 87654321 2467766 88899999875
No 301
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.42 E-value=0.00083 Score=52.56 Aligned_cols=96 Identities=25% Similarity=0.291 Sum_probs=61.0
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+... .+++.++ |+++.+ ....+.+..++..+...+.++.+...+ ...++++|++.+.|++++|
T Consensus 5 l~~~~~~~~~l~~~-~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 81 (106)
T 1xwb_A 5 VKDKADLDGQLTKA-SGKLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDE--CEDIAMEYNISSMPTFVFL 81 (106)
T ss_dssp CCSHHHHHHHHHHH-TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCCeEEEEEeccc--hHHHHHHcCCCcccEEEEE
Confidence 44523345555432 2335555 444322 113455666777776667777775432 4679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+++ .....+.| .+.+.|.+||++
T Consensus 82 ~~G-~~~~~~~g-~~~~~l~~~i~~ 104 (106)
T 1xwb_A 82 KNG-VKVEEFAG-ANAKRLEDVIKA 104 (106)
T ss_dssp ETT-EEEEEEES-CCHHHHHHHHHH
T ss_pred cCC-cEEEEEcC-CCHHHHHHHHHH
Confidence 754 33345678 688889999976
No 302
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.41 E-value=0.00072 Score=53.05 Aligned_cols=95 Identities=17% Similarity=0.250 Sum_probs=62.8
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.+++ +..++.. +++++ |+++.+ ....+.+..++..+.+.+.++.+...+ ...++++|++.+.|++++|
T Consensus 6 l~~~~~-~~~~~~~---~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (109)
T 2yzu_A 6 VTDQNF-DETLGQH---PLVLVDFWAEWCAPCRMIAPILEEIAKEYEGKLLVAKLDVDE--NPKTAMRYRVMSIPTVILF 79 (109)
T ss_dssp CCTTTH-HHHHHHC---SEEEEEEECTTCHHHHHHHHHHHHHHHHTBTTBEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred ccHhHH-HHHhcCC---CeEEEEEECCCCHHHHHhhHHHHHHHHHhhCceEEEEEECCC--CHhHHHhCCCCcCCEEEEE
Confidence 455553 3444432 35555 444322 112456667777877667777776432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.|..+.+.|.+||++.
T Consensus 80 ~~g-~~~~~~~g~~~~~~l~~~l~~~ 104 (109)
T 2yzu_A 80 KDG-QPVEVLVGAQPKRNYQAKIEKH 104 (109)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHTT
T ss_pred eCC-cEeeeEeCCCCHHHHHHHHHHH
Confidence 644 3334578988999999999874
No 303
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.40 E-value=0.00057 Score=56.92 Aligned_cols=83 Identities=19% Similarity=0.332 Sum_probs=59.9
Q ss_pred CceEEE-EEecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++ |+++.| .| ..|.+..++..|.+.+.|+.+.... ...++++|+|.++|++++|..++. ...+.|..+.
T Consensus 51 ~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~~g~-~~~~~G~~~~ 127 (141)
T 3hxs_A 51 DKPAIVDFYADWCGPCKMVAPILEELSKEYAGKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPMKGE-PQVNMGALSK 127 (141)
T ss_dssp SSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECSSSC-CEEEESCCCH
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeCCCC-EEEEeCCCCH
Confidence 345444 555422 22 3566777888887777777776432 368999999999999999965443 3477899999
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.+||+..
T Consensus 128 ~~l~~~l~~~ 137 (141)
T 3hxs_A 128 EQLKGYIDKV 137 (141)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 9999999874
No 304
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.39 E-value=0.00076 Score=52.82 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=50.8
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+..++..+.+.+.++.+...+ ...++++|++.+.|++++|+++ .....+.|..+.+.|.+||++
T Consensus 36 ~~~l~~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 102 (105)
T 1nsw_A 36 APVLEEFAEAHADKVTVAKLNVDE--NPETTSQFGIMSIPTLILFKGG-RPVKQLIGYQPKEQLEAQLAD 102 (105)
T ss_dssp HHHHHHHHHHSTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCCcEEEEEECcC--CHHHHHHcCCccccEEEEEeCC-eEEEEEecCCCHHHHHHHHHH
Confidence 456667777877667777776432 3679999999999999999643 444456898888899999876
No 305
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.38 E-value=0.0004 Score=58.14 Aligned_cols=96 Identities=15% Similarity=0.224 Sum_probs=64.8
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++++++....+. .++++++ |+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.++||+++|
T Consensus 11 l~~~~f~~~~~~---~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 85 (140)
T 3hz4_A 11 FEDMTWSQQVED---SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSSAVFGRINIAT--NPWTAEKYGVQGTPTFKFF 85 (140)
T ss_dssp ECHHHHHHHTTT---CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTT--CHHHHHHHTCCEESEEEEE
T ss_pred cchHhHHHHHHh---CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCceEEEEEECCc--CHhHHHHCCCCcCCEEEEE
Confidence 555443323332 2334444 555432 223466777888887778888876433 3789999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.|..+.+.|.+||++.
T Consensus 86 ~~G-~~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 86 CHG-RPVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp ETT-EEEEEEESSCCHHHHHHHHHHH
T ss_pred eCC-cEEEEEcCCCCHHHHHHHHHHH
Confidence 754 3444678999999999999874
No 306
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.38 E-value=0.00087 Score=52.01 Aligned_cols=67 Identities=16% Similarity=0.263 Sum_probs=50.4
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+.+ +.++.+...+ ...++++|++.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 35 ~~~~~~~~~~~~~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 35 APIIEELAEDYPQ-VGFGKLNSDE--NPDIAARYGVMSLPTVIFFKDG-EPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp HHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSCEEEEEETT-EEEEEEESCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCC-ceEEEEECCC--CHHHHHhCCccccCEEEEEECC-eEhhhccCCCCHHHHHHHHHHH
Confidence 4556667777765 7777775432 3679999999999999999644 3344578988999999999873
No 307
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.37 E-value=0.00085 Score=56.50 Aligned_cols=95 Identities=15% Similarity=0.193 Sum_probs=64.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.++ ++..+. .++++++ |+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.++|++++|
T Consensus 43 l~~~~-~~~~~~---~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 116 (148)
T 3p2a_A 43 ATAET-LDKLLQ---DDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGKVRFVKVNTEA--EPALSTRFRIRSIPTIMLY 116 (148)
T ss_dssp CCTTT-HHHHTT---CSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred cCHHH-HHHHHh---cCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCceEEEEEECcC--CHHHHHHCCCCccCEEEEE
Confidence 44444 444442 2334444 555432 223566777888887777777775432 4789999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....|.|..+.+.|.+||++.
T Consensus 117 ~~G-~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 117 RNG-KMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp ETT-EEEEEESSCCCHHHHHHHHHHH
T ss_pred ECC-eEEEEEeCCCCHHHHHHHHHHH
Confidence 743 4444678999999999999874
No 308
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.37 E-value=0.0016 Score=51.29 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=59.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+... .++++++ |+++.+ ....|.+..++..+ +.+.|+.+...+ ...++++|++.+.||+++|
T Consensus 6 i~~~~~~~~~~~~~-~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 81 (107)
T 1gh2_A 6 VGSDPDFQPELSGA-GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQAVFLEVDVHQ--CQGTAATNNISATPTFQFF 81 (107)
T ss_dssp ECSGGGHHHHHHHT-TTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred ecCHHHHHHHHHhC-CCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CCcEEEEEECcc--CHHHHHhcCCCcccEEEEE
Confidence 44433355555432 2334444 554422 22346667777777 457777776433 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.|. +.+.|.+||++.
T Consensus 82 ~~G-~~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 82 RNK-VRIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp ETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred ECC-eEEEEEeCC-CHHHHHHHHHHh
Confidence 754 333456774 445699998763
No 309
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.36 E-value=0.00062 Score=54.10 Aligned_cols=68 Identities=13% Similarity=0.096 Sum_probs=51.6
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+.+.+.++.+...+ ...++++|++.+.|++++|+++ .....+.|..+.+.|.+||++.
T Consensus 42 ~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 42 APSLEAIAAEYGDKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQGG-EVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHTHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEeCC-EEEEEEeCCCCHHHHHHHHHHH
Confidence 456677787876667777776432 4679999999999999999754 3334568988889999998763
No 310
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.36 E-value=0.0003 Score=55.58 Aligned_cols=82 Identities=10% Similarity=0.125 Sum_probs=48.6
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++ |+++.+ ....|.+..++..+ +.+.|+.+.... .+.++++|+|.+.||+++|+++ .....+.|..+.
T Consensus 18 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~-~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~g~~~~ 93 (105)
T 4euy_A 18 QQLVLLFIKTENCGVCDVMLRKVNYVLENY-NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYNG-KEILRESRFISL 93 (105)
T ss_dssp SSEEEEEEEESSCHHHHHHHHHHHHHHHTC-TTEEEEEEEECC--C---------CCCCEEEEEETT-EEEEEEESSCCH
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHHHHHc-CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeCC-eEEEEEeCCcCH
Confidence 345555 444432 22356667778777 456777765432 3679999999999999999744 344456898899
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.++|++.
T Consensus 94 ~~l~~~l~~~ 103 (105)
T 4euy_A 94 ENLERTIQLF 103 (105)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999863
No 311
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.35 E-value=0.0015 Score=50.86 Aligned_cols=96 Identities=19% Similarity=0.292 Sum_probs=59.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+++.+... .++++++ |+++.+ ....+.+..++..+. .+.|+.+...+ .+.++++|++.+.|++++|
T Consensus 4 i~~~~~~~~~l~~~-~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~ 79 (104)
T 2vim_A 4 LATAADLEKLINEN-KGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-EVEFAKVDVDQ--NEEAAAKYSVTAMPTFVFI 79 (104)
T ss_dssp CCSHHHHHHHHHTT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--CHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-CCEEEEEeccC--CHHHHHHcCCccccEEEEE
Confidence 34423345555432 2345555 554422 112455666777764 57777775432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.| .+.+.|.+||++.
T Consensus 80 ~~g-~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 80 KDG-KEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHhh
Confidence 744 33344577 6888999999863
No 312
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.34 E-value=0.00054 Score=56.26 Aligned_cols=83 Identities=19% Similarity=0.215 Sum_probs=58.7
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++ |+++.+ ....+.+..++..+.+.+.++.+.... ...++++|+|.+.|++++|++ +.....+.|..+.
T Consensus 42 ~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~~~~ 118 (128)
T 3ul3_B 42 NTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKRIYLLKVDLDK--NESLARKFSVKSLPTIILLKN-KTMLARKDHFVSS 118 (128)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEET-TEEEEEESSCCCH
T ss_pred CCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEEC-CEEEEEecCCCCH
Confidence 445555 444422 223566677787877667777775432 368999999999999999964 4444567899999
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.+||+++
T Consensus 119 ~~l~~~l~~~ 128 (128)
T 3ul3_B 119 NDLIALIKKH 128 (128)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 9999999763
No 313
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.33 E-value=0.00054 Score=55.25 Aligned_cols=67 Identities=16% Similarity=0.174 Sum_probs=51.4
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|+++ .....+.|..+.+.|.+||++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~ 115 (121)
T 2i1u_A 49 APVLEEIATERATDLTVAKLDVDT--NPETARNFQVVSIPTLILFKDG-QPVKRIVGAKGKAALLRELSD 115 (121)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHHHHHTCS
T ss_pred HHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEECC-EEEEEecCCCCHHHHHHHHHH
Confidence 466677787876667777776432 4679999999999999999743 334457898888999999876
No 314
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.33 E-value=0.0011 Score=52.59 Aligned_cols=67 Identities=18% Similarity=0.249 Sum_probs=50.2
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+.+.+.|+.+...+ ...++++|+|.+.|++++|+++ .....+.|. +.+.|.+||++.
T Consensus 43 ~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 43 APLFETLSNDYAGKVIFLKVDVDA--VAAVAEAAGITAMPTFHVYKDG-VKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp HHHHHHHHHHTTTTSEEEEEETTT--THHHHHHHTCCBSSEEEEEETT-EEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEEEECCc--hHHHHHHcCCCcccEEEEEECC-eEEEEEcCC-CHHHHHHHHHHH
Confidence 466677777776667777775432 3679999999999999999754 333456787 888999999874
No 315
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.32 E-value=0.0012 Score=54.74 Aligned_cols=84 Identities=17% Similarity=0.324 Sum_probs=58.9
Q ss_pred ceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChh
Q 014549 279 KVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (423)
Q Consensus 279 ~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~ 354 (423)
+++++ |+++.| ....+.+..++..+.+.+.|+.+.... ...++++|+|.+.|++++|..++. .+.+.|..+.+
T Consensus 39 k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~G~-~~~~~G~~~~~ 115 (136)
T 2l5l_A 39 KPAIVDFYADWCGPCKMVAPILDELAKEYDGQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPMEGK-PEMAQGAMPKA 115 (136)
T ss_dssp SCEEEEEECTTSHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECSSSC-CEEEESCCCHH
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECCCCc-EEEEeCCCCHH
Confidence 44444 555432 123466677888887677777776432 367999999999999999943333 34678999999
Q ss_pred HHHHHHHhhcc
Q 014549 355 RLSEVMEQNKL 365 (423)
Q Consensus 355 ~l~~fi~~~~~ 365 (423)
.|.+||++..-
T Consensus 116 ~l~~~l~~~~~ 126 (136)
T 2l5l_A 116 SFKKAIDEFLL 126 (136)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhh
Confidence 99999998543
No 316
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.32 E-value=0.00097 Score=53.70 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=61.3
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.++..++.. +++++ |+++.+ ....+.+..++.++.+ +.|+.+...+ ...++++|+|.+.|++++|
T Consensus 17 ~~~~~~~~~~~~~~---k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~-v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 90 (114)
T 2oe3_A 17 LTNLTEFRNLIKQN---DKLVIDFYATWCGPCKMMQPHLTKLIQAYPD-VRFVKCDVDE--SPDIAKECEVTAMPTFVLG 90 (114)
T ss_dssp CCSHHHHHHHHHHC---SEEEEEEECTTCHHHHHTHHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSBSEEEEE
T ss_pred cCCHHHHHHHHhCC---CEEEEEEECCCCHHHHHHHHHHHHHHHHCCC-CEEEEEECCC--CHHHHHHCCCCcccEEEEE
Confidence 55555555555432 35555 444322 2235667777777765 7777775432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+++ .....+.|.. .+.|.+||++
T Consensus 91 ~~G-~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 91 KDG-QLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ETT-EEEEEEESSC-HHHHHHHHHT
T ss_pred eCC-eEEEEEeCCC-HHHHHHHHHh
Confidence 754 3334567877 8889999875
No 317
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.31 E-value=0.00042 Score=61.22 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=34.2
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVEL 193 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc 193 (423)
..++.++.|+++||++|..+.|.+.++.+.+.+.+.+..+..
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCc
Confidence 356789999999999999999999999888766666655543
No 318
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.31 E-value=0.00054 Score=59.56 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=33.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHh--hccceEEEEE
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALL--EGIANTGMVE 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l--~~~~~~~~Vd 192 (423)
+.++.++.|+.+||++|+.+.|...++.+++ .+.+++...+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~ 68 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKL 68 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEe
Confidence 4567899999999999999999999988887 5666555544
No 319
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.31 E-value=0.00075 Score=57.76 Aligned_cols=81 Identities=11% Similarity=0.099 Sum_probs=59.1
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHH
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l 356 (423)
++|.|+++.+ ....|.+..++..|.+.+.|+.++..+ .+.++++|+|.++|++++|+++ .....+.|..+.+.|
T Consensus 67 vlv~F~a~wC~~C~~~~p~l~~la~~~~~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~G-~~~~~~~G~~~~~~l 143 (155)
T 2ppt_A 67 LLVDFWAPWCGPCRQMAPQFQAAAATLAGQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHKG-RELARAAGARPASEL 143 (155)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHTTTCEEEEEETTT--STHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeCC-eEEEEecCCCCHHHH
Confidence 4555555432 223566777888887778888886433 3679999999999999999643 344457898899999
Q ss_pred HHHHHhh
Q 014549 357 SEVMEQN 363 (423)
Q Consensus 357 ~~fi~~~ 363 (423)
.+||++.
T Consensus 144 ~~~l~~~ 150 (155)
T 2ppt_A 144 VGFVRGK 150 (155)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 320
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=97.31 E-value=0.00037 Score=61.11 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=42.0
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
+++++|.|| +.||+.|..-.|.+.++.++++.. +.|..|.++........+++++
T Consensus 51 Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~ 107 (179)
T 3ixr_A 51 NQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQG 107 (179)
T ss_dssp TSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 457888887 999999999999999999999765 6788888874433344444444
No 321
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.30 E-value=0.00089 Score=52.62 Aligned_cols=67 Identities=19% Similarity=0.246 Sum_probs=50.8
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+..++..+.+.+.++.+...+ .+.++++|++.+.|++++|+++ .....+.|..+.+.|.++|++
T Consensus 38 ~~~l~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l~~~l~~ 104 (107)
T 1dby_A 38 APVVDEIAGEYKDKLKCVKLNTDE--SPNVASEYGIRSIPTIMVFKGG-KKCETIIGAVPKATIVQTVEK 104 (107)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHHTCCSSCEEEEESSS-SEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEEEEEECCC--CHHHHHHCCCCcCCEEEEEeCC-EEEEEEeCCCCHHHHHHHHHH
Confidence 456667777777667777775432 4679999999999999999644 333456898888999999986
No 322
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=97.30 E-value=0.0011 Score=57.50 Aligned_cols=97 Identities=9% Similarity=-0.059 Sum_probs=65.7
Q ss_pred CCcEEEEEecCCCc-cccccHHHHHHHHHHhhc---cceEEEEEccc-c---------------------------hhhh
Q 014549 153 SKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEG---IANTGMVELGD-I---------------------------RLAT 200 (423)
Q Consensus 153 ~~~~lV~FYapwC~-~C~~~~p~~~~~A~~l~~---~~~~~~Vdc~~-~---------------------------~~~~ 200 (423)
+++++|.||+.||+ .|....|.+.++.+++.. .+.+..|.++. + ....
T Consensus 28 Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~~~~~~~~~~~~~~~~w~~l~~~~~~~~~ 107 (170)
T 3me7_A 28 GKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLF 107 (170)
T ss_dssp TSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHHHHHHHHHHTTCCSSSEEEEEESSHHHHH
T ss_pred CCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHHHHHHHHHHcCCCCCCeEEEeCCCHHHHH
Confidence 68999999999997 599999999999999852 36777777651 0 1123
Q ss_pred HHHhhCCCCc---cccccCccEEEEeCCCCCCCCCcccccC-CCCHHHHHHHHHHh
Q 014549 201 HLAERKPIGQ---IFFRRGLPSLVAFPPGCKSSDCMTRFEG-ELSVDAVTDWFATA 252 (423)
Q Consensus 201 ~l~~~~~~~~---~~~i~~~Pti~~f~~g~~~~~~~~~y~G-~~~~~~l~~fi~~~ 252 (423)
.+++.+|+.. ...+...|++.++-+.... ...|.| ..+.++|.+.+.+.
T Consensus 108 ~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i---~~~~~g~~~~~~~i~~~l~~~ 160 (170)
T 3me7_A 108 KLLDAIDFRFMTAGNDFIHPNVVVVLSPELQI---KDYIYGVNYNYLEFVNALRLA 160 (170)
T ss_dssp HHHHHTTCCCEEETTEEECCCEEEEECTTSBE---EEEEESSSCCHHHHHHHHHHH
T ss_pred HHHHHCCeEEecCCCccccCceEEEECCCCeE---EEEEeCCCCCHHHHHHHHHHh
Confidence 4555544321 1224566888888654442 234567 46789999988776
No 323
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.29 E-value=0.00016 Score=61.68 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=46.1
Q ss_pred CcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc---hh-hhHHHhhCCCCccccccCccEE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~---~~-~~~l~~~~~~~~~~~i~~~Pti 220 (423)
.+++++.+.. + +.|++|||++|+++.+.++++. +.+..+|++.+ +. ...|++.++ +.++|+|
T Consensus 41 ~~~~~i~~~~-V-vvf~~~~Cp~C~~~k~~L~~~~------i~~~~vdId~~~~~~~~~~~L~~~~g------~~tvP~i 106 (146)
T 2ht9_A 41 QIQETISDNC-V-VIFSKTSCSYCTMAKKLFHDMN------VNYKVVELDLLEYGNQFQDALYKMTG------ERTVPRI 106 (146)
T ss_dssp HHHHHHHHCS-E-EEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCTTHHHHHHHHHHHHS------CCCSCEE
T ss_pred HHHHHhcCCC-E-EEEECCCChhHHHHHHHHHHcC------CCeEEEECccCcCCHHHHHHHHHHhC------CCCcCeE
Confidence 3445555443 3 4499999999999999888763 45667888744 11 124778888 8899998
Q ss_pred EEeCCCC
Q 014549 221 VAFPPGC 227 (423)
Q Consensus 221 ~~f~~g~ 227 (423)
. .+|.
T Consensus 107 f--i~G~ 111 (146)
T 2ht9_A 107 F--VNGT 111 (146)
T ss_dssp E--ETTE
T ss_pred E--ECCE
Confidence 4 3553
No 324
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.29 E-value=0.001 Score=51.99 Aligned_cols=67 Identities=16% Similarity=0.332 Sum_probs=50.6
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+..++..+.+.+.+..+...+ .+.++++|++.+.|++++|+++ .....+.|..+.+.|.++|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 37 APVIDELAKEYSGKIAVYKLNTDE--APGIATQYNIRSIPTVLFFKNG-ERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp HHHHHHHHHHTTTTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCceEEEEEcCcc--hHHHHHhCCCCcccEEEEEeCC-eEEEEEecCCCHHHHHHHHHh
Confidence 455666777777667777775432 3679999999999999999743 333456788888999999976
No 325
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.28 E-value=0.0001 Score=60.35 Aligned_cols=70 Identities=11% Similarity=0.271 Sum_probs=48.6
Q ss_pred CcccccCCCCcEEEEEecCCCcccccc-HHHHHHHHHHhhccceEEEEEcccch----hhhHHHhhCCCCccccccCccE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLPS 219 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~-~p~~~~~A~~l~~~~~~~~Vdc~~~~----~~~~l~~~~~~~~~~~i~~~Pt 219 (423)
.+++.+.... ++.|++|||++|+++ .+.+++.+. ..+.+..+|.++++ ....|.+.++ +.++|+
T Consensus 17 ~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~~~---~~i~~~~vdid~~~~~~~~~~~l~~~~g------~~tvP~ 85 (118)
T 3c1r_A 17 HVKDLIAENE--IFVASKTYCPYCHAALNTLFEKLKV---PRSKVLVLQLNDMKEGADIQAALYEING------QRTVPN 85 (118)
T ss_dssp HHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSCE
T ss_pred HHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHcCC---CCCCeEEEECccCCChHHHHHHHHHHhC------CCCcCE
Confidence 4445554443 556999999999998 887765541 23688899988543 1245788888 889998
Q ss_pred EEEeCCCC
Q 014549 220 LVAFPPGC 227 (423)
Q Consensus 220 i~~f~~g~ 227 (423)
| |.+|+
T Consensus 86 v--fi~g~ 91 (118)
T 3c1r_A 86 I--YINGK 91 (118)
T ss_dssp E--EETTE
T ss_pred E--EECCE
Confidence 7 55663
No 326
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=97.27 E-value=0.00028 Score=60.53 Aligned_cols=56 Identities=11% Similarity=0.106 Sum_probs=36.5
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.++++++.|| +.||+.|..-.|.+.++.++++.. +.+..|+.+........+++++
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~~~~~~~~~~~~ 86 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPPFSNKAFKEHNK 86 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccchhHHHHHHHHcC
Confidence 3578899998 999999999999998888888765 5777787774434444555554
No 327
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=97.26 E-value=0.00082 Score=62.08 Aligned_cols=98 Identities=12% Similarity=0.020 Sum_probs=66.0
Q ss_pred CCCcEEEEEec-CCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhC-------CCC------------c
Q 014549 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PIG------------Q 210 (423)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~-------~~~------------~ 210 (423)
.+++++|.||+ .||+.|..-.|.+.++.+++++. +.|..|+++........++++ ++. .
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~D~~~~v~~ 155 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLSDLTHQISK 155 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTSHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEeCchHHHHH
Confidence 35789999999 99999999999999999999764 688888887443333334332 111 2
Q ss_pred ccccc------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|++. .+|+.+++-+.... ...+.| .++.+++++.+...
T Consensus 156 ~ygv~~~~~g~~~p~~flID~~G~I---~~~~~~~~~~~~~~~eil~~l~~l 204 (240)
T 3qpm_A 156 DYGVYLEDQGHTLRGLFIIDEKGVL---RQITMNDLPVGRSVDETLRLVQAF 204 (240)
T ss_dssp HTTCEETTTTEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCccccCCCccceEEEEcCCCeE---EEEEecCCCCCCCHHHHHHHHHHh
Confidence 34465 57998888554432 112222 45678888887654
No 328
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.24 E-value=0.0012 Score=53.78 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=53.8
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
.+.+..++..+...+.|+.+.....+...++++|+|.+.|++++|..++.....+.|..+.+.|.+||+...
T Consensus 45 ~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 45 QKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 455666777776667777775212224779999999999999999855555556789899999999998853
No 329
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.23 E-value=0.00041 Score=59.14 Aligned_cols=83 Identities=14% Similarity=0.159 Sum_probs=58.9
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEE---------------------------------------
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMV--------------------------------------- 191 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~V--------------------------------------- 191 (423)
.+.+..+|.|..++|++|+++.+.++++ +.+++.-+
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l-----~~v~v~~~~~P~~~~~~~s~~~a~a~~ca~d~~~a~~~~~~~g~~~~ 86 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM-----TDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPV 86 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC-----CSEEEEEEECCCTTTCTTHHHHHHHHHTSSSHHHHHHHHHHHCCCCT
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc-----CceEEEEEEccccccChhHHHHHHHHHcCCCHHHHHHHHHhCCCCCC
Confidence 4578899999999999999999987754 22222111
Q ss_pred ---Ecc-cchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 192 ---ELG-DIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 192 ---dc~-~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
.|. .-.....+++++| |+++||+++ .+|. .+.|..+.+.|.+++.+.
T Consensus 87 ~~~~~~~~v~~~~~la~~~g------I~gtPt~vi-~nG~-------~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 87 GGSICDNPVAETTSLGEQFG------FNGTPTLVF-PNGR-------TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp TCCCCSCSHHHHHHHHHHTT------CCSSCEEEC-TTSC-------EEESCCCTTHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHhC------CCccCEEEE-ECCE-------EeeCCCCHHHHHHHHHHH
Confidence 121 0112455777777 999999997 5553 577999999999998776
No 330
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.23 E-value=0.00034 Score=54.04 Aligned_cols=72 Identities=6% Similarity=-0.023 Sum_probs=49.1
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEccc--chh----hhHHHhhCCCCccccccCccEEEEeCCCCCCC
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGD--IRL----ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSS 230 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~--~~~----~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~ 230 (423)
++.|++|||++|++..+..++.. +.+-.+|.+. ... ..++.+.++ +.++|++.+ +|.
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~g------i~~~~~~v~~~~~~~~~~~~~~l~~~~g------~~~vP~l~~--~g~--- 76 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKREG------VDFEVIWIDKLEGEERKKVIEKVHSISG------SYSVPVVVK--GDK--- 76 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHHT------CCCEEEEGGGCCHHHHHHHHHHHHHHHS------SSCSCEEEE--TTE---
T ss_pred EEEEECCCChHHHHHHHHHHHcC------CCcEEEEeeeCCccchHHHHHHHHHhcC------CCCcCEEEE--CCE---
Confidence 56788999999999888877653 3344566551 111 255677778 889999887 542
Q ss_pred CCcccccCCCCHHHHHHHHH
Q 014549 231 DCMTRFEGELSVDAVTDWFA 250 (423)
Q Consensus 231 ~~~~~y~G~~~~~~l~~fi~ 250 (423)
.-|..+.+.|.+++.
T Consensus 77 -----~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 77 -----HVLGYNEEKLKELIR 91 (92)
T ss_dssp -----EEESCCHHHHHHHHH
T ss_pred -----EEeCCCHHHHHHHhc
Confidence 224458888888874
No 331
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.22 E-value=0.00019 Score=57.26 Aligned_cols=66 Identities=8% Similarity=0.061 Sum_probs=45.7
Q ss_pred CcccccCCCCcEEEEEec-----CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCcc
Q 014549 145 DFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYa-----pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~P 218 (423)
.++++++++. + +.|++ |||++|+++.+.+++.. +.+..+|.++++.. ..+.+.+| +.++|
T Consensus 9 ~~~~~i~~~~-v-vvf~~g~~~~~~C~~C~~~~~~L~~~~------i~~~~vdi~~~~~~~~~l~~~~g------~~~vP 74 (105)
T 2yan_A 9 RLKVLTNKAS-V-MLFMKGNKQEAKCGFSKQILEILNSTG------VEYETFDILEDEEVRQGLKAYSN------WPTYP 74 (105)
T ss_dssp HHHHHHTSSS-E-EEEESBCSSSBCTTHHHHHHHHHHHHT------CCCEEEEGGGCHHHHHHHHHHHT------CCSSC
T ss_pred HHHHHhccCC-E-EEEEecCCCCCCCccHHHHHHHHHHCC------CCeEEEECCCCHHHHHHHHHHHC------CCCCC
Confidence 3455565554 3 34777 99999999998887653 67888998855432 23556667 88999
Q ss_pred EEEEeCCC
Q 014549 219 SLVAFPPG 226 (423)
Q Consensus 219 ti~~f~~g 226 (423)
+| |.+|
T Consensus 75 ~v--~i~g 80 (105)
T 2yan_A 75 QL--YVKG 80 (105)
T ss_dssp EE--EETT
T ss_pred eE--EECC
Confidence 98 4455
No 332
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=97.19 E-value=0.00071 Score=54.70 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=62.7
Q ss_pred cccchhhhhhhhhcCCCceEEEEEec-CC-CC--CchHHHHHHHhccccceEEEEEccccc--cHHHHhhcCCCC-CCeE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSK-TG-ER--ASPFVRQISRNYWAYASFAFVLWREEE--SSIWWNTFEVES-APAI 334 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~-~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~--~~~l~~~f~v~~-~Ptl 334 (423)
+++.+.++++++. ++++++++.. .| .| ..+.+..++.. ..+.|..+.+.+.. +..++++|||.+ .|++
T Consensus 11 i~s~e~f~~ii~~---~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~ 85 (112)
T 3iv4_A 11 LSSIDQFEQVIEE---NKYVFVLKHSETCPISANAYDQFNKFLYE--RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQA 85 (112)
T ss_dssp CCSHHHHHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHH--HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEE
T ss_pred cCCHHHHHHHHhc---CCCEEEEEECCcCHhHHHHHHHHHHHhcc--CCceEEEEEeecCchhhHHHHHHhCCccCCCeE
Confidence 4544446666764 3477777653 22 11 23455555553 57889999765542 256999999995 9999
Q ss_pred EEecCCCcceeEecCCCChhHHHHHH
Q 014549 335 VFLKDPGVKPVVYYGSFNNSRLSEVM 360 (423)
Q Consensus 335 ~lfk~~~~~~~~y~g~~~~~~l~~fi 360 (423)
++|++|...-...++.++.+.|.+.+
T Consensus 86 il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 86 FYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp EEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred EEEECCEEEEEeeccccCHHHHHHhh
Confidence 99998766555557888888887654
No 333
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=97.19 E-value=0.00043 Score=59.72 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=40.8
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 43 gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~ 97 (165)
T 1q98_A 43 SKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEG 97 (165)
T ss_dssp TSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcC
Confidence 568999998 899999999999999999988 557888888874332233344444
No 334
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.17 E-value=0.00033 Score=52.57 Aligned_cols=71 Identities=10% Similarity=0.075 Sum_probs=48.3
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchh-hhHHHhhCCCCccccccCccEEEEeCCCCCCCCCccc
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTR 235 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~-~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~ 235 (423)
++.|+++||++|+++.+.+++. .+.+..+|.++++. ..++.+.++ +.++|++. .+|..
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~------~i~~~~~~i~~~~~~~~~~~~~~~------~~~vP~l~--~~g~~------- 61 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK------GVSFQELPIDGNAAKREEMIKRSG------RTTVPQIF--IDAQH------- 61 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCCEEEECTTCSHHHHHHHHHHS------SCCSCEEE--ETTEE-------
T ss_pred EEEEECCCChhHHHHHHHHHHC------CCCcEEEECCCCHHHHHHHHHHhC------CCCcCEEE--ECCEE-------
Confidence 5678999999999999888764 25677788875432 244667778 88999984 35532
Q ss_pred ccCCCCHHHHHHHHHH
Q 014549 236 FEGELSVDAVTDWFAT 251 (423)
Q Consensus 236 y~G~~~~~~l~~fi~~ 251 (423)
..| .++|.+++.+
T Consensus 62 i~g---~~~i~~~~~~ 74 (82)
T 1fov_A 62 IGG---YDDLYALDAR 74 (82)
T ss_dssp EES---HHHHHHHHHT
T ss_pred EeC---HHHHHHHHHC
Confidence 222 3567776644
No 335
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=97.17 E-value=0.0012 Score=53.69 Aligned_cols=95 Identities=23% Similarity=0.219 Sum_probs=60.5
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC-CC--CchHHHHHHHhcccc-ceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG-ER--ASPFVRQISRNYWAY-ASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.+++.+. .++++++ |+++.+ .| ..+.+..++..+.+. +.|+.+.... ...++++|+|.+.|++++
T Consensus 20 i~~~~~f~~~l~---~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~--~~~~~~~~~v~~~Pt~~~ 94 (121)
T 2j23_A 20 ISSYDQFKQVTG---GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE--QSQIAQEVGIRAMPTFVF 94 (121)
T ss_dssp CCSHHHHHHHHS---SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT--CHHHHHHHTCCSSSEEEE
T ss_pred cCCHHHHHHHHc---CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC--CHHHHHHcCCCcccEEEE
Confidence 555444555553 2334444 555422 22 245556666666544 6677765432 367999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++ .....+.|. +.+.|.+||++.
T Consensus 95 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 95 FKNG-QKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp EETT-EEEEEEESS-CHHHHHHHHHHH
T ss_pred EECC-eEEeeEcCC-CHHHHHHHHHHh
Confidence 9743 333456787 889999999873
No 336
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.15 E-value=0.0018 Score=51.43 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=54.6
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCCh
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNN 353 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~ 353 (423)
++++++ |+++.+ ....|.+..++..+.+ +.|+.+... +...++++|+|.+.|++++|++ +.....+.|. +.
T Consensus 24 ~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-~~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~~~-G~~~~~~~G~-~~ 98 (109)
T 3f3q_A 24 DKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-ADFYKLDVD--ELGDVAQKNEVSAMPTLLLFKN-GKEVAKVVGA-NP 98 (109)
T ss_dssp SSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT-SEEEEEETT--TCHHHHHHTTCCSSSEEEEEET-TEEEEEEESS-CH
T ss_pred CCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC-CEEEEEECC--CCHHHHHHcCCCccCEEEEEEC-CEEEEEEeCC-CH
Confidence 345555 444422 2234666777777753 677777543 2478999999999999999984 4444456777 67
Q ss_pred hHHHHHHHhh
Q 014549 354 SRLSEVMEQN 363 (423)
Q Consensus 354 ~~l~~fi~~~ 363 (423)
+.|.++|+++
T Consensus 99 ~~l~~~i~~~ 108 (109)
T 3f3q_A 99 AAIKQAIAAN 108 (109)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 8999999864
No 337
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.15 E-value=0.0031 Score=53.47 Aligned_cols=97 Identities=13% Similarity=0.204 Sum_probs=61.4
Q ss_pred cccchhhhhhhhhcCCCceE-EEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVK-VIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~-vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.++..+... .++++ |.|+++.| ....|.+..++..+ ..+.|+.+...+ .+.++++|+|.++|++++|
T Consensus 17 l~~~~~~~~~~~~~-~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~ 92 (153)
T 2wz9_A 17 VGSAGQFEELLRLK-AKSLLVVHFWAPWAPQCAQMNEVMAELAKEL-PQVSFVKLEAEG--VPEVSEKYEISSVPTFLFF 92 (153)
T ss_dssp ECSHHHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEE
T ss_pred cCCHHHHHHHHHhc-CCCeEEEEEECCCCHhHHHHHHHHHHHHHHc-CCeEEEEEECCC--CHHHHHHcCCCCCCEEEEE
Confidence 55434355556542 13344 44555422 22345666677776 457777776432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
++ +.....+.| .+.+.|.+||++..
T Consensus 93 ~~-G~~~~~~~G-~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 93 KN-SQKIDRLDG-AHAPELTKKVQRHA 117 (153)
T ss_dssp ET-TEEEEEEES-SCHHHHHHHHHHHS
T ss_pred EC-CEEEEEEeC-CCHHHHHHHHHHHh
Confidence 83 333334567 47788999998854
No 338
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.14 E-value=0.0016 Score=52.52 Aligned_cols=66 Identities=20% Similarity=0.269 Sum_probs=49.2
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..|.+ +.|..+...+ ...++++|+|.+.|++++|+++ .....+.|.. .+.|.+||++.
T Consensus 53 ~~~l~~~~~~~~~-~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 53 APVFADLAKKFPN-AVFLKVDVDE--LKPIAEQFSVEAMPTFLFMKEG-DVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp HHHHHHHHHHCTT-SEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESSC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHCCC-cEEEEEECCC--CHHHHHHcCCCcccEEEEEeCC-EEEEEEeCcC-HHHHHHHHHHH
Confidence 4566667777765 7777775432 4679999999999999999754 3334567887 88999999874
No 339
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.13 E-value=0.00052 Score=63.83 Aligned_cols=89 Identities=9% Similarity=-0.067 Sum_probs=63.5
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchh------------------------hhHHHhhCCCC
Q 014549 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRL------------------------ATHLAERKPIG 209 (423)
Q Consensus 155 ~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~------------------------~~~l~~~~~~~ 209 (423)
.+|+.|+++||+.|....|.+.+++++++.. +.|..|+++.... ...+++.|+
T Consensus 36 vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~yg-- 113 (249)
T 3a2v_A 36 FVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLG-- 113 (249)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHT--
T ss_pred EEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhC--
Confidence 4567889999999999999999999999865 7888899874221 234666666
Q ss_pred cccccc-------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 210 QIFFRR-------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 210 ~~~~i~-------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
+. .+|++.++-+++.. ...+.| .++.++|...+...
T Consensus 114 ----v~~~~~g~~~~p~~fIID~dG~I---~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 114 ----LLHAESATHTVRGVFIVDARGVI---RTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp ----CCCTTCSSSCCEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred ----CccccCCCcccceEEEECCCCeE---EEEEecCCcccchhHHHHHHHHHH
Confidence 65 88998888544432 112222 36889998888654
No 340
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.13 E-value=0.0014 Score=54.56 Aligned_cols=81 Identities=19% Similarity=0.211 Sum_probs=58.0
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHH
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRL 356 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l 356 (423)
++|.|+++.+ ....+.+..++..+.+.+.|+.+...+ ...++++|+|.++|++++|+++ .....+.|..+.+.|
T Consensus 53 vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~~~~~~G~~~~~~l 129 (140)
T 1v98_A 53 TLVDFFAPWCGPCRLVSPILEELARDHAGRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRG-APVATWVGASPRRVL 129 (140)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETT-EEEEEEESCCCHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCC-cEEEEEeCCCCHHHH
Confidence 5555665432 123466677888887667777776433 3679999999999999999754 333456898899999
Q ss_pred HHHHHhh
Q 014549 357 SEVMEQN 363 (423)
Q Consensus 357 ~~fi~~~ 363 (423)
.+||++.
T Consensus 130 ~~~i~~~ 136 (140)
T 1v98_A 130 EERLRPY 136 (140)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 341
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.12 E-value=0.0024 Score=50.79 Aligned_cols=92 Identities=21% Similarity=0.307 Sum_probs=59.5
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++..+ +++.++. ++++++ |+++.+ ....+.+..++..+. .+.|+.+...+ ...++++|+|.+.|++++|
T Consensus 14 ~~~~~-f~~~~~~---~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~ 86 (112)
T 1syr_A 14 TSQAE-FDSIISQ---NELVIVDFFAEWCGPCKRIAPFYEECSKTYT-KMVFIKVDVDE--VSEVTEKENITSMPTFKVY 86 (112)
T ss_dssp CSHHH-HHHHHHH---CSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--THHHHHHTTCCSSSEEEEE
T ss_pred CCHHH-HHHHHcc---CCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-CCEEEEEECCC--CHHHHHHcCCCcccEEEEE
Confidence 44444 4555543 235555 444322 123455666777765 46777775432 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+++ .....+.|. +.+.|.+||++
T Consensus 87 ~~G-~~~~~~~G~-~~~~l~~~l~~ 109 (112)
T 1syr_A 87 KNG-SSVDTLLGA-NDSALKQLIEK 109 (112)
T ss_dssp ETT-EEEEEEESC-CHHHHHHHHHT
T ss_pred ECC-cEEEEEeCC-CHHHHHHHHHH
Confidence 754 333456788 88999999986
No 342
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=97.12 E-value=0.0013 Score=61.32 Aligned_cols=98 Identities=13% Similarity=0.018 Sum_probs=64.8
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhC-------CCC------------c
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERK-------PIG------------Q 210 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~-------~~~------------~ 210 (423)
.+++++|.|| +.||+.|..-.|.+.++.+++++. +.|..|+++........++++ ++. .
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~va~ 169 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISK 169 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTSCCSCSSCEEECTTSHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhcCCcccccceeeCcHHHHHH
Confidence 3568889998 999999999999999999999765 688888887443333344432 111 2
Q ss_pred ccccc------CccEEEEeCCCCCCCCCcccccC----CCCHHHHHHHHHHh
Q 014549 211 IFFRR------GLPSLVAFPPGCKSSDCMTRFEG----ELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~------~~Pti~~f~~g~~~~~~~~~y~G----~~~~~~l~~fi~~~ 252 (423)
.|++. .+|+++++-+.... ...+.+ .++.+++++.+...
T Consensus 170 ~ygv~~~~~g~~~p~tflID~~G~I---~~~~~~~~~~~~~~~eil~~L~al 218 (254)
T 3tjj_A 170 DYGVYLEDSGHTLRGLFIIDDKGIL---RQITLNDLPVGRSVDETLRLVQAF 218 (254)
T ss_dssp HHTCEETTTTEECEEEEEECTTSBE---EEEEEECTTCCCCHHHHHHHHHHH
T ss_pred HcCCccccCCCccceEEEECCCCeE---EEEEecCCCCCCCHHHHHHHHHhh
Confidence 23353 46888888654432 112222 55678888777543
No 343
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.11 E-value=0.0027 Score=50.91 Aligned_cols=95 Identities=16% Similarity=0.269 Sum_probs=59.2
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.++..+... .++++++ |+++.+ ....+.+..++.++ .+.|+.+... +...++++|+|.+.|++++|
T Consensus 18 l~~~~~~~~~l~~~-~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~ 92 (117)
T 2xc2_A 18 LKQDGDLESLLEQH-KNKLVVVDFFATWCGPCKTIAPLFKELSEKY--DAIFVKVDVD--KLEETARKYNISAMPTFIAI 92 (117)
T ss_dssp CCSTTHHHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--SSEEEEEETT--TSHHHHHHTTCCSSSEEEEE
T ss_pred eCCHHHHHHHHHhC-CCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--CcEEEEEECC--ccHHHHHHcCCCccceEEEE
Confidence 55533355555532 2334444 555422 12345566666665 5666666532 23679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++ .....+.| .+.+.|.++|+++
T Consensus 93 ~~G-~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 93 KNG-EKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp ETT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred eCC-cEEEEEeC-CCHHHHHHHHHHh
Confidence 754 33344577 6788899999763
No 344
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=97.09 E-value=0.00083 Score=57.76 Aligned_cols=56 Identities=13% Similarity=0.077 Sum_probs=44.9
Q ss_pred CCCcEEEEEe-cCCCcccc-ccHHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCG-QFSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~-~~~p~~~~~A~~l~~~-~~-~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.+++++|.|| +.||+.|. .-.|.+.++.++++.. +. |..|+.+........+++++
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~~~~~~~~~~~~~ 93 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVNDPFVMKAWAKSYP 93 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHTCT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHhcC
Confidence 3568899999 89999999 8999999999998753 67 88888875444556677777
No 345
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.08 E-value=0.00073 Score=56.17 Aligned_cols=96 Identities=13% Similarity=0.101 Sum_probs=61.6
Q ss_pred cccchhhhhhhhhcCCCc-eEEEEEecC---CCCCchHHHHHHHhccc-cceEEEEEccccccHHHHhhcCCC------C
Q 014549 262 YTKESMGKNFLAKTGPHK-VKVIFFSKT---GERASPFVRQISRNYWA-YASFAFVLWREEESSIWWNTFEVE------S 330 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~-~~vl~f~~~---~~~~~~~~~~~a~~~~~-~~~f~~v~~~~~~~~~l~~~f~v~------~ 330 (423)
++.++ ++..+... ..+ ++|.|+++. |....|.+..++.+|.+ .+.|+.+... +.+.++++|+|. +
T Consensus 12 l~~~~-f~~~~~~~-~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~--~~~~~~~~~~v~~~~~~~~ 87 (137)
T 2dj0_A 12 FNDKT-IDEELERD-KRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVG--RYTDVSTRYKVSTSPLTKQ 87 (137)
T ss_dssp CCTTH-HHHHHHHS-TTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTT--TCHHHHHHTTCCCCSSSSC
T ss_pred ccHhh-HHHHHhcC-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCc--cCHHHHHHccCcccCCcCC
Confidence 55555 44455433 233 455555542 34456888888888864 5666666432 247899999998 9
Q ss_pred CCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 331 APAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 331 ~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.||+++|+++. ....+.|..+.+.|.+|+.+
T Consensus 88 ~Pt~~~~~~G~-~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 88 LPTLILFQGGK-EAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp SSEEEEESSSS-EEEEESCBCSSSCBCCCCCC
T ss_pred CCEEEEEECCE-EEEEecCcCchHHHHHHHhc
Confidence 99999997543 33456787776666666655
No 346
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=97.08 E-value=0.00054 Score=59.72 Aligned_cols=63 Identities=13% Similarity=0.110 Sum_probs=48.5
Q ss_pred CCCCcEEEEEecCCCcccccc-HHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHhhCCCCcccccc-CccE
Q 014549 151 HDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKPIGQIFFRR-GLPS 219 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~-~p~~~~~A~~l~~~-~~-~~~Vdc~~~~~~~~l~~~~~~~~~~~i~-~~Pt 219 (423)
....++|+.|++.||+.|..- .|.+.++.++++.. +. |..|+.+........+++++ +. .||.
T Consensus 42 ~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~~~~~~~~~~~~------~~~~fp~ 108 (171)
T 2pwj_A 42 KDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDPYTVNAWAEKIQ------AKDAIEF 108 (171)
T ss_dssp TTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCHHHHHHHHHHTT------CTTTSEE
T ss_pred CCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHHhC------CCCceEE
Confidence 334578889999999999997 99999999988754 56 88888875445566777777 63 6773
No 347
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.08 E-value=0.001 Score=53.59 Aligned_cols=79 Identities=20% Similarity=0.199 Sum_probs=56.2
Q ss_pred eEEEEEecCC-CC--CchHHHHHHHhccc-----cceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcc-eeEecCC
Q 014549 280 VKVIFFSKTG-ER--ASPFVRQISRNYWA-----YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK-PVVYYGS 350 (423)
Q Consensus 280 ~~vl~f~~~~-~~--~~~~~~~~a~~~~~-----~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~-~~~y~g~ 350 (423)
++|.|+++.+ .| ..|.+..++..+.+ .+.|+.+..... .+++ +|.++||+++|++++.. ...|.|.
T Consensus 28 vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~---~~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~ 102 (121)
T 2djj_A 28 VLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATAN---DVPD--EIQGFPTIKLYPAGAKGQPVTYSGS 102 (121)
T ss_dssp EEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTTS---CCSS--CCSSSSEEEEECSSCTTSCCCCCCC
T ss_pred EEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECccc---cccc--ccCcCCeEEEEeCcCCCCceEecCC
Confidence 4555555432 22 35667778888865 677777764433 2555 99999999999876553 5677899
Q ss_pred CChhHHHHHHHhh
Q 014549 351 FNNSRLSEVMEQN 363 (423)
Q Consensus 351 ~~~~~l~~fi~~~ 363 (423)
.+.+.|.+||+++
T Consensus 103 ~~~~~l~~~i~~~ 115 (121)
T 2djj_A 103 RTVEDLIKFIAEN 115 (121)
T ss_dssp SCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhc
Confidence 9999999999885
No 348
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.07 E-value=0.0015 Score=52.06 Aligned_cols=67 Identities=15% Similarity=0.189 Sum_probs=49.9
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.+..++..+. .+.|..+...+ ..+++++|++.+.|++++|+++ .....+.|..+.+.|.+++..+
T Consensus 38 ~~~l~~~~~~~~-~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G-~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 38 EKVLDKFGARAP-QVAISSVDSEA--RPELMKELGFERVPTLVFIRDG-KVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp HHHHHHHHTTCT-TSCEEEEEGGG--CHHHHHHTTCCSSCEEEEEESS-SEEEEEESCCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHCC-CcEEEEEcCcC--CHHHHHHcCCcccCEEEEEECC-EEEEEEcCCCCHHHHHHHHHHH
Confidence 455666776654 56777775432 4779999999999999999654 3444568988999999999874
No 349
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.06 E-value=0.00028 Score=62.88 Aligned_cols=43 Identities=7% Similarity=-0.007 Sum_probs=38.0
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~ 194 (423)
+.++.+|+|+++||+||+++.|.++++.+.+.+.+.|..+...
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCC
Confidence 4678999999999999999999999999888777788888775
No 350
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=97.05 E-value=0.00045 Score=59.85 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=48.1
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEE
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti 220 (423)
+++++|.|| +.||+.|....|.+.++.+++ ..+.+..|+++........+++++ +..+|.+
T Consensus 47 gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~------~~~~~~l 108 (171)
T 2yzh_A 47 DVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFN------IQNVTVA 108 (171)
T ss_dssp SSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTT------CCSSEEE
T ss_pred CCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcC------CCCeEEe
Confidence 568999998 899999999999999998888 567888888875444556677777 5456643
No 351
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.03 E-value=0.0034 Score=49.75 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=58.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC-CC--CchHHHHHHHhc-cccceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG-ER--ASPFVRQISRNY-WAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~-~~--~~~~~~~~a~~~-~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.+++.+.....++++++ |+++.+ .| ..|.+..++..+ ...+.|+.+...+ ...++++|+|.+.|++++
T Consensus 5 i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~ 82 (112)
T 3d6i_A 5 INDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE--NSEISELFEISAVPYFII 82 (112)
T ss_dssp ECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT--CHHHHHHTTCCSSSEEEE
T ss_pred cCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc--CHHHHHHcCCCcccEEEE
Confidence 4552334555543122345554 555422 22 345666677764 2347777775432 467999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++ .....+.|. ....|.++|++.
T Consensus 83 ~~~G-~~~~~~~G~-~~~~l~~~l~~~ 107 (112)
T 3d6i_A 83 IHKG-TILKELSGA-DPKEYVSLLEDC 107 (112)
T ss_dssp EETT-EEEEEECSC-CHHHHHHHHHHH
T ss_pred EECC-EEEEEecCC-CHHHHHHHHHHH
Confidence 9743 333445676 445688998764
No 352
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=97.03 E-value=0.00079 Score=57.99 Aligned_cols=54 Identities=15% Similarity=0.030 Sum_probs=41.0
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCC
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPI 208 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~ 208 (423)
+++++|.|| +.||+.|..-.|.+.++.++ ..+.+..|+++........++++++
T Consensus 46 Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~ 100 (166)
T 3p7x_A 46 GKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGL 100 (166)
T ss_dssp TSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTC
T ss_pred CCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCC
Confidence 578889998 78999999999999988777 3467777887754445556666664
No 353
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.03 E-value=0.0029 Score=51.89 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=61.1
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEec
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLK 338 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk 338 (423)
+++.+.+++.+... ..++|.|+++.+ ....|.+..++..+ ..+.|+.+...+ ..+++++|+|.+.||+++|+
T Consensus 24 l~~~~~f~~~~~~~--k~vvv~F~a~wC~~C~~~~p~l~~l~~~~-~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~i~~ 98 (125)
T 1r26_A 24 VYSVEQFRNIMSED--ILTVAWFTAVWCGPCKTIERPMEKIAYEF-PTVKFAKVDADN--NSEIVSKCRVLQLPTFIIAR 98 (125)
T ss_dssp ECCHHHHHHHHHSS--SCEEEEEECTTCHHHHHTHHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEE
T ss_pred CCCHHHHHHHHccC--CEEEEEEECCcCHhHHHHHHHHHHHHHHC-CCCEEEEEECCC--CHHHHHHcCCCcccEEEEEe
Confidence 56523345555322 224444555432 22456677778777 357777776432 36799999999999999997
Q ss_pred CCCcceeEecCCCChhHHHHHHHhh
Q 014549 339 DPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 339 ~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
++ .....+.| .+.+.|.+||++.
T Consensus 99 ~G-~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 99 SG-KMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp TT-EEEEEEES-SCHHHHHHHHHHH
T ss_pred CC-eEEEEEeC-CCHHHHHHHHHHH
Confidence 54 33345678 6888899998763
No 354
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=97.03 E-value=0.00084 Score=58.31 Aligned_cols=56 Identities=9% Similarity=-0.006 Sum_probs=44.3
Q ss_pred CCCcEEEEEe-cCCCccccc-cHHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~-~~p~~~~~A~~l~~~-~-~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.+++++|.|| +.||+.|.. -.|.+.++.++++.. + .|..|+.+........+++++
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~~~~~~~ 89 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVNDSFVMDAWGKAHG 89 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 3567778876 999999999 899999999988754 7 888888875444556777777
No 355
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.00 E-value=0.00042 Score=53.50 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=41.2
Q ss_pred EEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchh-hhHHHhhCCCCccccccCccEEEEeCCC
Q 014549 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRL-ATHLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 156 ~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~-~~~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
-++.|++|||++|+++.+.+++. .+.+..+|.++++. ..++.+.++ +.++|++ |.+|
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~------~i~~~~~di~~~~~~~~~l~~~~~------~~~vP~l--~~~g 64 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK------GAEFNEIDASATPELRAEMQERSG------RNTFPQI--FIGS 64 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT------TCCCEEEESTTSHHHHHHHHHHHT------SSCCCEE--EETT
T ss_pred cEEEEECCCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHhC------CCCcCEE--EECC
Confidence 36789999999999988877654 25677888875432 234666777 8899976 3455
No 356
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.99 E-value=0.00043 Score=59.51 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=43.9
Q ss_pred CCCcEEEEEec-CCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.+++++|.||+ .||+.|....|.+.++.+++ ..+.+..|+++........+++++
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~ 96 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEG 96 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcC
Confidence 35689999995 99999999999999998888 557888888875444455667776
No 357
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.99 E-value=0.00085 Score=55.17 Aligned_cols=85 Identities=19% Similarity=0.255 Sum_probs=56.3
Q ss_pred CceEEEEE-ecCC-CC--CchHHHHHHHhcc--ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCc-ceeEec-C
Q 014549 278 HKVKVIFF-SKTG-ER--ASPFVRQISRNYW--AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV-KPVVYY-G 349 (423)
Q Consensus 278 ~~~~vl~f-~~~~-~~--~~~~~~~~a~~~~--~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~-~~~~y~-g 349 (423)
++++++.| ++.| .| ..|.+..++..+. ..+.|+.+... ....++++|+|.++||+++|+++.. .++.|. |
T Consensus 25 ~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~--~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg 102 (133)
T 2dj3_A 25 KKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDAT--ANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGG 102 (133)
T ss_dssp TSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTT--TSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSS
T ss_pred CCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCC--cCHHHHhhcCCCcCCEEEEEeCCCcccceEecCC
Confidence 34555544 4422 12 3466677777776 34555555422 2356788999999999999987654 345677 5
Q ss_pred CCChhHHHHHHHhhc
Q 014549 350 SFNNSRLSEVMEQNK 364 (423)
Q Consensus 350 ~~~~~~l~~fi~~~~ 364 (423)
..+.+.|.+||+++.
T Consensus 103 ~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 103 NRDLEHLSKFIDEHA 117 (133)
T ss_dssp CCSTTHHHHHHHHHS
T ss_pred CcCHHHHHHHHHHhc
Confidence 688999999999854
No 358
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=96.98 E-value=0.0023 Score=57.97 Aligned_cols=97 Identities=15% Similarity=0.266 Sum_probs=66.6
Q ss_pred cccchhhhhhhhhcCCCceE-EEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVK-VIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~-vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+|.+++....+++ ++++ |.|+++.| ....|.+..++..+.+.+.|+.+.... ...++++|+|.++||+++|
T Consensus 17 lt~~~f~~~v~~~---~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~ 91 (222)
T 3dxb_A 17 LTDDSFDTDVLKA---DGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQ--NPGTAPKYGIRGIPTLLLF 91 (222)
T ss_dssp CCTTTHHHHHTTC---SSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTT--CTTTGGGGTCCSBSEEEEE
T ss_pred CCHHHHHHHHHhc---CCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCCcEEEEEECCC--CHHHHHHcCCCcCCEEEEE
Confidence 5665543333332 3344 44555432 223566777888887777887776433 3679999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
+++ .....+.|..+.+.|.+||+...
T Consensus 92 ~~G-~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 92 KNG-EVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp ETT-EEEEEEESCCCHHHHHHHHHHHS
T ss_pred ECC-eEEEEeccccChHHHHHHHHhhc
Confidence 853 34446789999999999999864
No 359
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=96.95 E-value=0.0018 Score=51.31 Aligned_cols=75 Identities=7% Similarity=0.079 Sum_probs=48.4
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc--hhhhHH----HhhCCCCccccccCccEEEEeCCCC
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI--RLATHL----AERKPIGQIFFRRGLPSLVAFPPGC 227 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~--~~~~~l----~~~~~~~~~~~i~~~Pti~~f~~g~ 227 (423)
+.-++.|+++||++|++..+.+++.. +.+-.+|.+.. ....++ .+..+ +.++|+|.+ +|.
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~~------i~y~~vdI~~~~~~~~~~~~~~l~~~~g------~~~vP~l~i--~~~ 86 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDLG------VDFDYVYVDRLEGKEEEEAVEEVRRFNP------SVSFPTTII--NDE 86 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHHT------BCEEEEEGGGCCHHHHHHHHHHHHHHCT------TCCSCEEEE--TTT
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcC------CCcEEEEeeccCcccHHHHHHHHHHhCC------CCccCEEEE--CCC
Confidence 34567799999999999998887653 34556666531 111222 23457 889999876 331
Q ss_pred CCCCCcccccCCCCHHHHHHHH
Q 014549 228 KSSDCMTRFEGELSVDAVTDWF 249 (423)
Q Consensus 228 ~~~~~~~~y~G~~~~~~l~~fi 249 (423)
.+-|..+.+.|.+++
T Consensus 87 -------~~igg~~~~~l~~~L 101 (103)
T 3nzn_A 87 -------KAIVGFKEKEIRESL 101 (103)
T ss_dssp -------EEEESCCHHHHHHHT
T ss_pred -------EEEEcCCHHHHHHHh
Confidence 234667778777764
No 360
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=96.94 E-value=0.00045 Score=59.82 Aligned_cols=58 Identities=12% Similarity=0.182 Sum_probs=43.2
Q ss_pred CCCCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhhCCC
Q 014549 151 HDSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAERKPI 208 (423)
Q Consensus 151 ~~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~~~~ 208 (423)
..++++++.|| +.||+.|..-.|.+.++.++++.. +.+..|+.+........++++++
T Consensus 31 ~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~~~~~~~~~~~~~ 90 (164)
T 4gqc_A 31 KRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSPWCLKKFKDENRL 90 (164)
T ss_dssp HTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCHHHHHHHHHHTTC
T ss_pred cCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCHHHHHHHHHhcCc
Confidence 45778888888 999999999888888888888765 67777887644344445555543
No 361
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.86 E-value=0.001 Score=59.53 Aligned_cols=55 Identities=9% Similarity=0.066 Sum_probs=42.0
Q ss_pred CCCcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCC
Q 014549 152 DSKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 152 ~~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
.+++++|.|| +.||+.|..-.|.+.++.+++ ..+.|..|+++........+++++
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~~~~~~~~~~~~ 132 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLPFAQSRFCGAEG 132 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCHHHHTTCTTTTT
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCHHHHHHHHHHcC
Confidence 3578899998 789999999999999999988 457888888874433333445554
No 362
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.86 E-value=0.0034 Score=51.19 Aligned_cols=95 Identities=8% Similarity=0.146 Sum_probs=60.0
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.+++.+... +...++++|+ |+++.+ ....|.+..+|.+|. .+.|..++..+ .+++|+|.+.||+++|
T Consensus 8 it~~~f~~~v~-~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~v~f~kvd~d~-----~~~~~~v~~~PT~~~f 80 (118)
T 3evi_A 8 ISGNQYVNEVT-NAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-ETKFVKAIVNS-----CIQHYHDNCLPTIFVY 80 (118)
T ss_dssp CCGGGHHHHTT-TCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-TSEEEEEEGGG-----TSTTCCGGGCSEEEEE
T ss_pred eCHHHHHHHHH-hcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-CCEEEEEEhHH-----hHHHCCCCCCCEEEEE
Confidence 55555333333 2222335555 555432 234677888998885 57888887543 2589999999999999
Q ss_pred cCCCcceeEecC-------CCChhHHHHHHHhhc
Q 014549 338 KDPGVKPVVYYG-------SFNNSRLSEVMEQNK 364 (423)
Q Consensus 338 k~~~~~~~~y~g-------~~~~~~l~~fi~~~~ 364 (423)
+++.... .+.| .++.++|..+|.++.
T Consensus 81 k~G~~v~-~~~G~~~~gg~~~~~~~le~~L~~~g 113 (118)
T 3evi_A 81 KNGQIEA-KFIGIIECGGINLKLEELEWKLAEVG 113 (118)
T ss_dssp ETTEEEE-EEESTTTTTCSSCCHHHHHHHHHTTT
T ss_pred ECCEEEE-EEeChhhhCCCCCCHHHHHHHHHHcC
Confidence 9764332 2332 357889999998743
No 363
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.85 E-value=0.0032 Score=52.16 Aligned_cols=95 Identities=23% Similarity=0.252 Sum_probs=63.3
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhccccceEEEEEccc-------cccHHHHhhcCCCCC
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWRE-------EESSIWWNTFEVESA 331 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~-------~~~~~l~~~f~v~~~ 331 (423)
++.++ +++.+.+ .++|.|+++.| ....|.+..++..+. +.|+.+...+ .+...++++|+|.+.
T Consensus 21 l~~~~-~~~~~~~----~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~ 93 (135)
T 3emx_A 21 ITPEE-FRQLLQG----DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGERELSAARLEMNKAGVEGT 93 (135)
T ss_dssp CCHHH-HHHHHTS----SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSS
T ss_pred cCHHH-HHHHhCC----cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhhhhhhhhHHHHHHcCCcee
Confidence 44444 4444443 25565666532 223466677777764 7777776532 124789999999999
Q ss_pred CeEEEecCCCcceeEecCCCChhHHHHHHHhhc
Q 014549 332 PAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNK 364 (423)
Q Consensus 332 Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~ 364 (423)
||+++|++ +.....+.|..+.+.+.++++...
T Consensus 94 Pt~~~~~~-G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 94 PTLVFYKE-GRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp SEEEEEET-TEEEEEEESCCCHHHHHHHHHHHC
T ss_pred CeEEEEcC-CEEEEEEeCCCCHHHHHHHHHHHh
Confidence 99999994 444445689999999999998843
No 364
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.84 E-value=0.011 Score=46.59 Aligned_cols=96 Identities=14% Similarity=0.167 Sum_probs=59.8
Q ss_pred cccchhhhhhhhhcCCCce-EEEEEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKV-KVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~-~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.++ +.+.+... .+++ +|.|+++.+ ....|.+..++..+. .+.|+.+...+ +...++++|+|.+.||++++
T Consensus 10 l~~~~-~~~~~~~~-~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~-~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 85 (111)
T 2pu9_C 10 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 85 (111)
T ss_dssp ECTTT-HHHHHTTC-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEE
T ss_pred echHH-HHHHHHhc-CCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC-CeEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 56555 44445432 2334 444555422 123456666777775 36777776432 24789999999999999998
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++. ....+.|. +.+.|.++|++.
T Consensus 86 ~~G~-~~~~~~G~-~~~~l~~~l~~~ 109 (111)
T 2pu9_C 86 KENS-VVGEVTGA-KYDKLLEAIQAA 109 (111)
T ss_dssp SSSS-EEEEEESS-CHHHHHHHHHHH
T ss_pred eCCc-EEEEEcCC-CHHHHHHHHHHh
Confidence 7654 33345676 478899998763
No 365
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.83 E-value=0.0023 Score=51.43 Aligned_cols=79 Identities=13% Similarity=0.144 Sum_probs=50.9
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEcccc---c-cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCC
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREE---E-SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~---~-~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~ 352 (423)
++|.|+++.+ ....|.+..++..+... +..+..... + ...++++|+|.+.||+++|+++ .....+.|..+
T Consensus 32 ~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G-~~~~~~~G~~~ 108 (118)
T 1zma_A 32 ATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDG-QINVRCDSSMS 108 (118)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETT-EEEEECCTTCC
T ss_pred EEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECC-EEEEEecCCCC
Confidence 4444555432 22346666677666433 444433222 1 2578899999999999999754 33455689889
Q ss_pred hhHHHHHHH
Q 014549 353 NSRLSEVME 361 (423)
Q Consensus 353 ~~~l~~fi~ 361 (423)
.+.|.+||+
T Consensus 109 ~~~l~~~l~ 117 (118)
T 1zma_A 109 AQEIKDFAG 117 (118)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhh
Confidence 999999985
No 366
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.82 E-value=0.00029 Score=62.52 Aligned_cols=42 Identities=17% Similarity=0.172 Sum_probs=36.4
Q ss_pred CCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcc
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~ 194 (423)
.++.+|+|++.||+||+++.|.+ +++++.+.+.++|..++..
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 58 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVS 58 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEech
Confidence 46899999999999999999986 6888877777888888876
No 367
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.81 E-value=0.0069 Score=45.11 Aligned_cols=67 Identities=13% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 290 ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 290 ~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
....+.+..++.++.+.+.+..+...+ ..+++++|++.+.|++++ ++ . . .+.|..+.+.|.++|++.
T Consensus 18 ~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~G-~-~-~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 18 PAAKRVVEEVANEMPDAVEVEYINVME--NPQKAMEYGIMAVPTIVI--NG-D-V-EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp CTHHHHHHHHHHHCSSSEEEEEEESSS--SCCTTTSTTTCCSSEEEE--TT-E-E-ECCSSSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEEEECCC--CHHHHHHCCCcccCEEEE--CC-E-E-eeecCCCHHHHHHHHHHh
Confidence 334577788888887677777776443 356899999999999988 32 2 2 678888889999999863
No 368
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.80 E-value=0.0014 Score=51.73 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=41.9
Q ss_pred CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhC-CCCccccccCccEEEEeCCC
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERK-PIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~-~~~~~~~i~~~Pti~~f~~g 226 (423)
...-++.|++|||++|++..+.+++.. +.+-.+|.++++.. ..+.+.. + ..++|++ |.+|
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~~------i~y~~idI~~~~~~~~~l~~~~~g------~~~vP~i--fi~g 75 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRKG------VEFQEYCIDGDNEAREAMAARANG------KRSLPQI--FIDD 75 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHHT------CCCEEEECTTCHHHHHHHHHHTTT------CCCSCEE--EETT
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHCC------CCCEEEEcCCCHHHHHHHHHHhCC------CCCCCEE--EECC
Confidence 344567799999999999998887653 56777888755432 2344444 6 7899987 4455
No 369
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.79 E-value=0.0057 Score=50.52 Aligned_cols=65 Identities=12% Similarity=0.164 Sum_probs=46.7
Q ss_pred HHHHHhccccceEEEEEcccc--ccHHHHhhcCCCCCCeEEEe-cCCCcce-eEecCCCChhHHHHHHHh
Q 014549 297 RQISRNYWAYASFAFVLWREE--ESSIWWNTFEVESAPAIVFL-KDPGVKP-VVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 297 ~~~a~~~~~~~~f~~v~~~~~--~~~~l~~~f~v~~~Ptl~lf-k~~~~~~-~~y~g~~~~~~l~~fi~~ 362 (423)
..++..+. .+.++.+...+. ....++++|+|.+.|++++| +++.... ..+.|..+.+.|.++|+.
T Consensus 57 ~~l~~~~~-~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~ 125 (134)
T 2fwh_A 57 PQVQKALA-DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRD 125 (134)
T ss_dssp HHHHHHTT-TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHH
T ss_pred HHHHHHhc-CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHh
Confidence 44555554 367777765432 23789999999999999999 4443321 357899999999999987
No 370
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=96.76 E-value=0.0036 Score=57.47 Aligned_cols=83 Identities=18% Similarity=0.139 Sum_probs=58.2
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccc---cceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcc----eeEecC
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK----PVVYYG 349 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~---~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~----~~~y~g 349 (423)
++|.|+++.| ....|.+..++..+.+ .+.|+.+.....+...++++|+|.++||+++|+++... .+.+.|
T Consensus 33 vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g 112 (244)
T 3q6o_A 33 WAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG 112 (244)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT
T ss_pred EEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC
Confidence 4455655432 2245777888888876 67788876543345889999999999999999875432 233455
Q ss_pred CCChhHHHHHHHhh
Q 014549 350 SFNNSRLSEVMEQN 363 (423)
Q Consensus 350 ~~~~~~l~~fi~~~ 363 (423)
.+.+.|.++|.+.
T Consensus 113 -~~~~~l~~~i~~~ 125 (244)
T 3q6o_A 113 -ADVQTLRERLIDA 125 (244)
T ss_dssp -CCHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHH
Confidence 6888888888774
No 371
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.72 E-value=0.0069 Score=45.13 Aligned_cols=76 Identities=13% Similarity=0.086 Sum_probs=54.4
Q ss_pred EEEEEec-C--CCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHH
Q 014549 281 KVIFFSK-T--GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLS 357 (423)
Q Consensus 281 ~vl~f~~-~--~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~ 357 (423)
++.|+++ + +....+.+..++.++.+.+.+..+...+ ..+++++|++.+.|++++ ++. . .+.|..+.+.|.
T Consensus 5 vv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~--~G~-~--~~~G~~~~~~l~ 77 (85)
T 1nho_A 5 IEVFTSPTCPYCPMAIEVVDEAKKEFGDKIDVEKIDIMV--DREKAIEYGLMAVPAIAI--NGV-V--RFVGAPSREELF 77 (85)
T ss_dssp EEEESCSSSCCSTTHHHHHHHHHHHHCSSCCEEEECTTT--CGGGGGGTCSSCSSEEEE--TTT-E--EEECSSCCHHHH
T ss_pred EEEEECCCCcchHHHHHHHHHHHHHhcCCeEEEEEECCC--CHHHHHhCCceeeCEEEE--CCE-E--EEccCCCHHHHH
Confidence 4445543 2 2334677777888887677887776432 357999999999999998 332 2 568888889999
Q ss_pred HHHHhh
Q 014549 358 EVMEQN 363 (423)
Q Consensus 358 ~fi~~~ 363 (423)
++|++.
T Consensus 78 ~~l~~~ 83 (85)
T 1nho_A 78 EAINDE 83 (85)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999873
No 372
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=96.72 E-value=0.00093 Score=53.82 Aligned_cols=64 Identities=14% Similarity=0.237 Sum_probs=42.1
Q ss_pred cccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc----hh-hhHHHhhCCCCccccccCccEEEE
Q 014549 148 SIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI----RL-ATHLAERKPIGQIFFRRGLPSLVA 222 (423)
Q Consensus 148 ~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~----~~-~~~l~~~~~~~~~~~i~~~Pti~~ 222 (423)
+.+++++ ++.|++|||++|++..+.+++.. +.+-.+|.+.. .. ...+.+..| +.++|++
T Consensus 14 ~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~~------i~~~~~di~~~~~~~~~~~~~l~~~~g------~~tvP~i-- 77 (113)
T 3rhb_A 14 KTVTENT--VVIYSKTWCSYCTEVKTLFKRLG------VQPLVVELDQLGPQGPQLQKVLERLTG------QHTVPNV-- 77 (113)
T ss_dssp HHHHHSS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEEGGGSTTHHHHHHHHHHHHHS------CCSSCEE--
T ss_pred HHHhcCC--EEEEECCCChhHHHHHHHHHHcC------CCCeEEEeecCCCChHHHHHHHHHHhC------CCCcCEE--
Confidence 4444444 66799999999999998887642 34566777642 22 222555557 7899998
Q ss_pred eCCCC
Q 014549 223 FPPGC 227 (423)
Q Consensus 223 f~~g~ 227 (423)
|.+|+
T Consensus 78 fi~g~ 82 (113)
T 3rhb_A 78 FVCGK 82 (113)
T ss_dssp EETTE
T ss_pred EECCE
Confidence 45663
No 373
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.71 E-value=0.0027 Score=51.82 Aligned_cols=62 Identities=11% Similarity=0.089 Sum_probs=44.1
Q ss_pred ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhhccc
Q 014549 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~~~ 366 (423)
..+.++.+.........++++|+|.++|++++|..++.....+.|..+.+.|.+||++..-+
T Consensus 61 ~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 61 RHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred cCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 34555555433223478999999999999999954444444578988999999999985443
No 374
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=96.70 E-value=0.0014 Score=58.03 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=42.4
Q ss_pred CCcEEEEEecCCCccccc-cHHHHHHHHHHhhcc-ce-EEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-AN-TGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~-~~p~~~~~A~~l~~~-~~-~~~Vdc~~~~~~~~l~~~~~ 207 (423)
..++|+.|++.||+.|.. -.|.+.+++++++.. +. |..|+.+........+++++
T Consensus 57 k~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~~~~~~f~~~~~ 114 (184)
T 3uma_A 57 KRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDLHVMGAWATHSG 114 (184)
T ss_dssp SEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHHT
T ss_pred CCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHHhC
Confidence 335566667999999999 599999999999765 56 88999885545566677776
No 375
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.68 E-value=0.0091 Score=52.42 Aligned_cols=96 Identities=19% Similarity=0.182 Sum_probs=66.2
Q ss_pred CCCCcEEEEEecCCCccccccHHH-H--HHHHHHhhccceEEEEEcccchh------------hhHHH---hhCCCCccc
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGA-W--KTIAALLEGIANTGMVELGDIRL------------ATHLA---ERKPIGQIF 212 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~-~--~~~A~~l~~~~~~~~Vdc~~~~~------------~~~l~---~~~~~~~~~ 212 (423)
+..+..+|++++|||..|..|... | +++.+.++....+-..|.+.... -..++ +.++
T Consensus 53 ~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~~nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~----- 127 (178)
T 2ec4_A 53 RDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQK----- 127 (178)
T ss_dssp TTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSC-----
T ss_pred hhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHHcCEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcC-----
Confidence 468999999999999999988742 2 34666676666777777663321 01233 3367
Q ss_pred cccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 213 FRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 213 ~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
+.+||++.++.+......-.....|..+++++++.+.+.
T Consensus 128 -~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 128 -TDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp -STTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred -CCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 889999999865422111134567999999999887655
No 376
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.67 E-value=0.012 Score=47.43 Aligned_cols=96 Identities=15% Similarity=0.181 Sum_probs=59.5
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++++ +.+.+... .++++++ |+++.+ ....|.+..++.++. .+.|+.+...+ +...++++|+|.+.||++++
T Consensus 23 l~~~~-~~~~~~~~-~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~ 98 (124)
T 1faa_A 23 VNKDT-FWPIVKAA-GDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKIL 98 (124)
T ss_dssp ECTTT-HHHHHHHT-TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEE
T ss_pred ecchh-HHHHHHhc-CCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-CCEEEEEecCc-chHHHHHHcCCCeeeEEEEE
Confidence 55555 34444432 2334444 554422 123456666777765 46777775432 24779999999999999999
Q ss_pred cCCCcceeEecCCCChhHHHHHHHhh
Q 014549 338 KDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+++. ....+.|.. .+.|.++|++.
T Consensus 99 ~~G~-~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 99 KENS-VVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp ETTE-EEEEEESSC-HHHHHHHHHHH
T ss_pred eCCc-EEEEEcCCC-HHHHHHHHHHh
Confidence 7643 333456764 78899998763
No 377
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.65 E-value=0.0056 Score=47.66 Aligned_cols=76 Identities=16% Similarity=0.138 Sum_probs=50.3
Q ss_pred EEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhC--CCCccccccCccEEEEeCCCCCCCCCc
Q 014549 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERK--PIGQIFFRRGLPSLVAFPPGCKSSDCM 233 (423)
Q Consensus 156 ~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~--~~~~~~~i~~~Pti~~f~~g~~~~~~~ 233 (423)
-++.|..|||++|++.+...++ ..+.+-.+|.++++...+...+. | .+++|+|++ .+|..
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~------~gi~y~~idi~~d~~~~~~~~~~~~G------~~tVP~I~i-~Dg~~----- 66 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA------NRIAYDEVDIEHNRAAAEFVGSVNGG------NRTVPTVKF-ADGST----- 66 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH------TTCCCEEEETTTCHHHHHHHHHHSSS------SSCSCEEEE-TTSCE-----
T ss_pred cEEEEcCCCCHhHHHHHHHHHh------cCCceEEEEcCCCHHHHHHHHHHcCC------CCEeCEEEE-eCCEE-----
Confidence 3677889999999987765543 23577788988665443333332 4 778999754 45532
Q ss_pred ccccCCCCHHHHHHHHHHh
Q 014549 234 TRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 234 ~~y~G~~~~~~l~~fi~~~ 252 (423)
. +..+.++|.+++.+.
T Consensus 67 --l-~~~~~~el~~~L~el 82 (92)
T 2lqo_A 67 --L-TNPSADEVKAKLVKI 82 (92)
T ss_dssp --E-ESCCHHHHHHHHHHH
T ss_pred --E-eCCCHHHHHHHHHHh
Confidence 2 234688898888765
No 378
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.63 E-value=0.021 Score=48.32 Aligned_cols=116 Identities=14% Similarity=0.223 Sum_probs=70.4
Q ss_pred CCceeecccchhhhhhhhhcCCCceEEEEEecCCCC----CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCC-
Q 014549 256 LPRIFYYTKESMGKNFLAKTGPHKVKVIFFSKTGER----ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVES- 330 (423)
Q Consensus 256 ~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~~~~~----~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~- 330 (423)
+|.+..+|.++ ...+.++.- ...+++|...... ..+.++.+|.+|++.+.|+.+.....+...+.+.||++.
T Consensus 13 ~PLV~e~t~en-~~~~~~~~~--~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~ 89 (147)
T 3bj5_A 13 LPLVIEFTEQT-APKIFGGEI--KTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKE 89 (147)
T ss_dssp --CEEECCTTT-HHHHHSSSC--CEEEEEECCTTSSSHHHHHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGG
T ss_pred CCeeEEecccc-HHHHhcCCC--ceEEEEEecCCcHhHHHHHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcc
Confidence 45555566555 344443221 1333445532111 124456689999999999988743233356889999985
Q ss_pred -CCeEEEecC-CCcceeEec-CCCChhHHHHHHHhhccccC-cccccc
Q 014549 331 -APAIVFLKD-PGVKPVVYY-GSFNNSRLSEVMEQNKLQEL-PQLRSV 374 (423)
Q Consensus 331 -~Ptl~lfk~-~~~~~~~y~-g~~~~~~l~~fi~~~~~~~l-p~l~~~ 374 (423)
.|+|+++.. .+.....+. ++++.+.|.+|++...-..+ |.+.++
T Consensus 90 ~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p~~KSE 137 (147)
T 3bj5_A 90 ECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQ 137 (147)
T ss_dssp GCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCEEECCS
T ss_pred cCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccccccCC
Confidence 899999864 333222333 78899999999999877666 444443
No 379
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.62 E-value=0.0017 Score=52.01 Aligned_cols=68 Identities=7% Similarity=0.035 Sum_probs=46.1
Q ss_pred CCcccccCCCCcEEEEEec-----CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCc
Q 014549 144 EDFPSIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGL 217 (423)
Q Consensus 144 ~nf~~~v~~~~~~lV~FYa-----pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~ 217 (423)
+.+++++++++ ++.|+. |||++|++..+.+++. .+.+..+|.++++.. ..+.+..| ..++
T Consensus 6 ~~~~~~i~~~~--vvvy~~g~~~~~~Cp~C~~ak~~L~~~------~i~~~~vdi~~~~~~~~~l~~~~g------~~~v 71 (109)
T 1wik_A 6 SGLKVLTNKAS--VMLFMKGNKQEAKCGFSKQILEILNST------GVEYETFDILEDEEVRQGLKTFSN------WPTY 71 (109)
T ss_dssp CCHHHHHTTSS--EEEEESSTTTCCCSSTHHHHHHHHHHT------CSCEEEEESSSCHHHHHHHHHHHS------CCSS
T ss_pred HHHHHHhccCC--EEEEEecCCCCCCCchHHHHHHHHHHc------CCCeEEEECCCCHHHHHHHHHHhC------CCCC
Confidence 34566676655 445677 9999999988877654 267889998855432 23555556 7789
Q ss_pred cEEEEeCCCC
Q 014549 218 PSLVAFPPGC 227 (423)
Q Consensus 218 Pti~~f~~g~ 227 (423)
|+| |.+|.
T Consensus 72 P~i--fi~g~ 79 (109)
T 1wik_A 72 PQL--YVRGD 79 (109)
T ss_dssp CEE--ECSSS
T ss_pred CEE--EECCE
Confidence 984 56664
No 380
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.62 E-value=0.018 Score=59.20 Aligned_cols=84 Identities=15% Similarity=0.131 Sum_probs=60.1
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccc---cceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCc---ceeEecCC
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWA---YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGV---KPVVYYGS 350 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~---~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~---~~~~y~g~ 350 (423)
++|.|+++.+ ....|.+..++.++.+ .+.|+.|...+.+..+++++|+|.++||+++|+++.. ....+.|.
T Consensus 33 vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~ 112 (519)
T 3t58_A 33 WAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAG 112 (519)
T ss_dssp EEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSS
T ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCC
Confidence 4555666532 2346777888888876 6778887654334578999999999999999986432 23445677
Q ss_pred CChhHHHHHHHhh
Q 014549 351 FNNSRLSEVMEQN 363 (423)
Q Consensus 351 ~~~~~l~~fi~~~ 363 (423)
.+.+.|.++|.+.
T Consensus 113 ~~~~~L~~~l~~~ 125 (519)
T 3t58_A 113 ANVQTLRMRLIDA 125 (519)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8888888888775
No 381
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=96.61 E-value=0.006 Score=49.61 Aligned_cols=68 Identities=15% Similarity=0.218 Sum_probs=46.3
Q ss_pred chHHHHHHHhccccceEEEEEccc-----cccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 293 SPFVRQISRNYWAYASFAFVLWRE-----EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~-----~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.|.+..++.++.+.+.|+.+...+ .....++++|+|.+.||+++|+++ ....-+.| .+.+.|.+||++
T Consensus 50 ~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~-~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 50 EPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTP-QKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSS-CEEEGGGG-GCHHHHHHHHHC
T ss_pred hHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCC-ceEecccc-CCHHHHHHHHhc
Confidence 456666777776677788877531 123678999999999999999862 22222223 466788888865
No 382
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.60 E-value=0.0059 Score=50.50 Aligned_cols=96 Identities=10% Similarity=0.136 Sum_probs=56.9
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
+++.+.+...++.. .++++++ |+++.| ....+.+..++..+ .+.|+.+... +...++++|+|.+.|++++|
T Consensus 25 l~~~~~~~~~l~~~-~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~v~~~~vd~~--~~~~l~~~~~v~~~Pt~~~~ 99 (133)
T 3cxg_A 25 LKNTGSLNQVFSST-QNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--YVTLVDIDVD--IHPKLNDQHNIKALPTFEFY 99 (133)
T ss_dssp CCCTTHHHHHHTC--CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--ECEEEEEETT--TCHHHHHHTTCCSSSEEEEE
T ss_pred ecChhHHHHHHHhc-CCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--CEEEEEEecc--chHHHHHhcCCCCCCEEEEE
Confidence 55434355555433 2345555 555422 12345555555444 3455555432 24779999999999999999
Q ss_pred c--CCCc-ceeEecCCCChhHHHHHHHhh
Q 014549 338 K--DPGV-KPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 338 k--~~~~-~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+ ++.. ....+.|. +.+.|.++|++.
T Consensus 100 ~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 100 FNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp EEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred EecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 6 4432 23345676 788999999874
No 383
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.59 E-value=0.013 Score=47.60 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=59.0
Q ss_pred cccchhhhhhhhhc-CCCceEEEE-EecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKT-GPHKVKVIF-FSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~-f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.++..+... ..++++++. +++.+ ....+.+..++..+. .+.|+.+... +...++++|+|.+.|++++
T Consensus 21 l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~v~~~~vd~d--~~~~l~~~~~v~~~Pt~~~ 97 (124)
T 1xfl_A 21 CHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-NVLFLKVDTD--ELKSVASDWAIQAMPTFMF 97 (124)
T ss_dssp ESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TSHHHHHHTTCCSSSEEEE
T ss_pred eCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-CcEEEEEECc--cCHHHHHHcCCCccCEEEE
Confidence 43333344444432 123455554 44322 123456666777764 4666666532 2478999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++. ....+.| .+.+.|.++|++.
T Consensus 98 ~~~G~-~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 98 LKEGK-ILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EECCE-EEEEEeC-CCHHHHHHHHHHh
Confidence 97543 3334567 5888899998763
No 384
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=96.58 E-value=0.0082 Score=50.79 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=58.2
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcce--------e
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKP--------V 345 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~--------~ 345 (423)
++++++ |+++.| ....|.+..++.+|.+.+.|+.|...+ .++++++|+|.+.||+++|+++.... .
T Consensus 23 ~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~~~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (149)
T 3gix_A 23 EKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKMAAIYLVDVDQ--TAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHT 100 (149)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTTEEEEEEETTT--CCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCS
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHccCceEEEEEECCc--CHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCC
Confidence 345555 555432 223566777888887767777776432 36799999999999999998754331 2
Q ss_pred EecC-CCChhHHHHHHHhh
Q 014549 346 VYYG-SFNNSRLSEVMEQN 363 (423)
Q Consensus 346 ~y~g-~~~~~~l~~fi~~~ 363 (423)
.+.| ..+.+.|.++|+..
T Consensus 101 ~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 101 KFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp CEESCCSSHHHHHHHHHHH
T ss_pred eEeeecCCHHHHHHHHHHH
Confidence 3467 67888999998874
No 385
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.56 E-value=0.007 Score=50.78 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=55.5
Q ss_pred CceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeE-------
Q 014549 278 HKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVV------- 346 (423)
Q Consensus 278 ~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~------- 346 (423)
++++++ |+++.+ ....|.+..++.++.+.+.|+.|...+ .++++++|+|.+.||+++|+++......
T Consensus 23 ~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~v~~~~vd~d~--~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~ 100 (142)
T 1qgv_A 23 DRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYLVDITE--VPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNN 100 (142)
T ss_dssp SSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEETTT--CCTTTTSSCSCSSCEEEEEETTEEEEEECC-----
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCeEEEEEcccc--CHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcc
Confidence 345555 555422 223567777888886677777776443 3579999999999999999865433221
Q ss_pred -ecCCCC-hhHHHHHHHhh
Q 014549 347 -YYGSFN-NSRLSEVMEQN 363 (423)
Q Consensus 347 -y~g~~~-~~~l~~fi~~~ 363 (423)
..|..+ .+.|.++|++.
T Consensus 101 ~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 101 KINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp -CCSCCSCHHHHHHHHHHH
T ss_pred eeeeecCcHHHHHHHHHHH
Confidence 235454 67888888773
No 386
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.54 E-value=0.029 Score=57.57 Aligned_cols=176 Identities=14% Similarity=0.072 Sum_probs=106.3
Q ss_pred CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEEeCCCCCCCCC
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDC 232 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~ 232 (423)
.+++-+.++.+.|..|..+....++++.. .+.+.+-..+ + . -...|++.+.++|...
T Consensus 18 ~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-s~~i~~~~~~-~---~---------------~~~~p~~~~~~~~~~~--- 74 (521)
T 1hyu_A 18 TKPVELIATLDDSAKSAEIKELLAEIAEL-SDKVTFKEDN-T---L---------------PVRKPSFLITNPGSQQ--- 74 (521)
T ss_dssp CSCEEEEEECCSSHHHHHHHHHHHHHHTT-CTTEEEEECT-T---S---------------SSCSSEEEEECTTCCC---
T ss_pred CCCEEEEEEeCCCcchHHHHHHHHHHHHh-CCceEEEEcC-C---c---------------ccCCCEEEEecCCCcc---
Confidence 45666677777799998888777777654 4445542211 1 0 0267999999887543
Q ss_pred cccccCCCCHHHHHHHHHHhh--ccCCceeecccchhhhhhhhhcCCCceEEEEEec-CCCCC--chHHHHHHHhccccc
Q 014549 233 MTRFEGELSVDAVTDWFATAI--LKLPRIFYYTKESMGKNFLAKTGPHKVKVIFFSK-TGERA--SPFVRQISRNYWAYA 307 (423)
Q Consensus 233 ~~~y~G~~~~~~l~~fi~~~~--~~~p~~~~it~~~~~~~fl~~~~~~~~~vl~f~~-~~~~~--~~~~~~~a~~~~~~~ 307 (423)
...|.|-..=..+..|+...+ ...|.. ++ ++..+.. ........+++|++. |..|. .|.+..++..+. .+
T Consensus 75 ~i~f~g~p~g~e~~s~~~~l~~~~~~~~~--~~-~~~~~~i-~~~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~-~v 149 (521)
T 1hyu_A 75 GPRFAGSPLGHEFTSLVLALLWTGGHPSK--EA-QSLLEQI-RDIDGDFEFETYYSLSCHNCPDVVQALNLMAVLNP-RI 149 (521)
T ss_dssp SCEEESCCCGGGHHHHHHHHHHHTTCCCC--SC-HHHHHHH-HHCCSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT-TE
T ss_pred eEEEeccCcchhHHHHHHHHHhhcCCCCC--CC-HHHHHHH-HhcCCCcceEEEECCCCcCcHHHHHHHHHHHhHcC-ce
Confidence 578988766666666665431 122222 22 2223333 222212234445554 33343 456666777764 66
Q ss_pred eEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 308 ~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+..+... +.++++++|+|.+.|++++ + + +.+ ..|..+.+.|.+|+...
T Consensus 150 ~~~~vd~~--~~~~~~~~~~i~svPt~~i--~-g-~~~-~~G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 150 KHTAIDGG--TFQNEITERNVMGVPAVFV--N-G-KEF-GQGRMTLTEIVAKVDTG 198 (521)
T ss_dssp EEEEEETT--TCHHHHHHTTCCSSSEEEE--T-T-EEE-EESCCCHHHHHHHHCCS
T ss_pred EEEEEech--hhHHHHHHhCCCccCEEEE--C-C-EEE-ecCCCCHHHHHHHHhhc
Confidence 66666533 2478999999999999977 2 2 222 35888889999998763
No 387
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.51 E-value=0.0072 Score=47.66 Aligned_cols=97 Identities=20% Similarity=0.250 Sum_probs=59.0
Q ss_pred cccchhhhhhhhhc-CCCceEEEEE-ecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKT-GPHKVKVIFF-SKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~f-~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.+++.+... ..+++++++| ++.+ .| ..+.+..++..+. .+.|..+... +...++++|++.+.|++++
T Consensus 9 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 85 (113)
T 1ti3_A 9 CHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-NVTFLKVDVD--ELKAVAEEWNVEAMPTFIF 85 (113)
T ss_dssp ECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-SEEEEEEETT--TCHHHHHHHHCSSTTEEEE
T ss_pred eccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-CcEEEEEEcc--ccHHHHHhCCCCcccEEEE
Confidence 43433345555442 2345655554 4322 11 2455566776664 4666666533 2467999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++ .....+.| .+.+.|.++|++.
T Consensus 86 ~~~G-~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 86 LKDG-KLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp EETT-EEEEEEEC-CCTTHHHHHHHHH
T ss_pred EeCC-EEEEEEec-CCHHHHHHHHHHh
Confidence 9744 33334567 6788899998863
No 388
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=96.49 E-value=0.0035 Score=54.75 Aligned_cols=55 Identities=13% Similarity=0.076 Sum_probs=40.0
Q ss_pred CCcE-EEEEecCCCcccc-ccHHHHHHHHHHhhcc-ceE-EEEEcccchhhhHHHhhCC
Q 014549 153 SKPW-LIQVYSDGSYLCG-QFSGAWKTIAALLEGI-ANT-GMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~-lV~FYapwC~~C~-~~~p~~~~~A~~l~~~-~~~-~~Vdc~~~~~~~~l~~~~~ 207 (423)
++++ |+.|++.||+.|. .-.|.+.+++++++.. +.+ |.|.++........+++.+
T Consensus 43 gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~~~~~~~f~~~~~ 101 (173)
T 3mng_A 43 GKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHK 101 (173)
T ss_dssp TSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCCHHHHHHHHHHhC
Confidence 4444 4455599999999 5889999999998765 444 4588875445566778877
No 389
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=95.47 E-value=0.00046 Score=53.82 Aligned_cols=68 Identities=15% Similarity=0.240 Sum_probs=47.9
Q ss_pred CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 292 ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 292 ~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+.+..++..+.+.+.|+.+... +...++++|++.+.|++++|+++ .....+.|..+.+.|.+||++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~v~~~Pt~~~~~~g-~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 37 IAPIIEELAKEYEGKVKVVKVNVD--ENPNTAAQYGIRSIPTLLLFKNG-QVVDRLVGAQPKEALKERIDK 104 (106)
Confidence 456666677776655666655432 23679999999999999999644 333456788888888888875
No 390
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.44 E-value=0.0047 Score=56.02 Aligned_cols=92 Identities=8% Similarity=0.060 Sum_probs=59.6
Q ss_pred hhhhhhhcCCCceEEE-EEecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcc
Q 014549 268 GKNFLAKTGPHKVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (423)
Q Consensus 268 ~~~fl~~~~~~~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~ 343 (423)
+...+......+++|+ |+++.+ .| ..|.+..+|..|. .+.|+.+... ...++.+|+|.++||+++|+++. .
T Consensus 110 f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~~~G~-~ 184 (217)
T 2trc_P 110 FLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-MVKFCKIRAS---NTGAGDRFSSDVLPTLLVYKGGE-L 184 (217)
T ss_dssp HHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-TSEEEEEEHH---HHTCSTTSCGGGCSEEEEEETTE-E
T ss_pred HHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-CeEEEEEECC---cHHHHHHCCCCCCCEEEEEECCE-E
Confidence 4444543322345544 555432 22 3566777888774 6788888654 45688999999999999998543 3
Q ss_pred eeEecCCCC-------hhHHHHHHHhhc
Q 014549 344 PVVYYGSFN-------NSRLSEVMEQNK 364 (423)
Q Consensus 344 ~~~y~g~~~-------~~~l~~fi~~~~ 364 (423)
...+.|..+ .+.|..||.++.
T Consensus 185 v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 185 ISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp EEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred EEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 344556544 488999998864
No 391
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.42 E-value=0.0011 Score=58.66 Aligned_cols=40 Identities=10% Similarity=0.125 Sum_probs=34.9
Q ss_pred CCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG 194 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~ 194 (423)
+++.+|+|++.||+||+++.|.++++.+.+ .+.|..+...
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 578999999999999999999999999988 3667777764
No 392
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.41 E-value=0.017 Score=45.78 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=59.3
Q ss_pred cccchhhhhhhhhc-CCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKT-GPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.+++.+... ..++++++ |+++.+ ....+.+..++..+. .+.|..+.... ...++++|++.+.|++++
T Consensus 11 i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~ 87 (118)
T 2vm1_A 11 CHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-GAIFLKVDVDE--LKDVAEAYNVEAMPTFLF 87 (118)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEETTT--SHHHHHHTTCCSBSEEEE
T ss_pred ecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-CcEEEEEEccc--CHHHHHHcCCCcCcEEEE
Confidence 44333345555431 11335455 444322 113455666777765 56677765432 367999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++. ....+.| .+.+.|.++|.+.
T Consensus 88 ~~~g~-~~~~~~g-~~~~~l~~~l~~~ 112 (118)
T 2vm1_A 88 IKDGE-KVDSVVG-GRKDDIHTKIVAL 112 (118)
T ss_dssp EETTE-EEEEEES-CCHHHHHHHHHHH
T ss_pred EeCCe-EEEEecC-CCHHHHHHHHHHH
Confidence 97543 3334567 5788899998874
No 393
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=96.37 E-value=0.0079 Score=54.74 Aligned_cols=42 Identities=12% Similarity=0.004 Sum_probs=35.0
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEccc
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGD 195 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~ 195 (423)
.++|+.|+++||+.|..-.|.+.++.++++.. +.+..|.++.
T Consensus 33 ~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~ 75 (224)
T 1prx_A 33 WGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDS 75 (224)
T ss_dssp EEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSC
T ss_pred eEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35666778999999999999999999999764 6888888874
No 394
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.36 E-value=0.0085 Score=49.50 Aligned_cols=68 Identities=22% Similarity=0.343 Sum_probs=49.1
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhhcc
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQNKL 365 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~~~ 365 (423)
.+.+..++..+ ..+.|+.+...+ ...++++|+|.+.|++++|+++ .....+.|. +.+.|.++|.+..-
T Consensus 65 ~~~l~~l~~~~-~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G-~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 65 APYYIELSENY-PSLMFLVIDVDE--LSDFSASWEIKATPTFFFLRDG-QQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp HHHHHHHHHHC-TTSEEEEEETTT--SHHHHHHTTCCEESEEEEEETT-EEEEEEESC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHC-CCCEEEEEeCcc--cHHHHHHcCCCcccEEEEEcCC-eEEEEEeCC-CHHHHHHHHHHHhc
Confidence 45666677776 356777775432 4789999999999999999644 333445777 78899999987543
No 395
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.35 E-value=0.0067 Score=49.73 Aligned_cols=70 Identities=9% Similarity=0.089 Sum_probs=48.6
Q ss_pred chHHH--HHHHhccccceEEEEEccc-cccHHHHhhcCC---CCCCeEEEecCCCcceeEecC-------CCChhHHHHH
Q 014549 293 SPFVR--QISRNYWAYASFAFVLWRE-EESSIWWNTFEV---ESAPAIVFLKDPGVKPVVYYG-------SFNNSRLSEV 359 (423)
Q Consensus 293 ~~~~~--~~a~~~~~~~~f~~v~~~~-~~~~~l~~~f~v---~~~Ptl~lfk~~~~~~~~y~g-------~~~~~~l~~f 359 (423)
.+.+. .++..+.+.+.++.+...+ .....++++|+| .+.|++++|...+.....+.| .++.+.|.+|
T Consensus 48 ~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~ 127 (133)
T 3fk8_A 48 DKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDF 127 (133)
T ss_dssp HHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHH
T ss_pred HHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHH
Confidence 45555 5666665667777776532 224789999999 999999999444443334455 4678889999
Q ss_pred HHh
Q 014549 360 MEQ 362 (423)
Q Consensus 360 i~~ 362 (423)
+++
T Consensus 128 l~~ 130 (133)
T 3fk8_A 128 FAK 130 (133)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 396
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=96.33 E-value=0.01 Score=49.21 Aligned_cols=95 Identities=11% Similarity=0.118 Sum_probs=57.8
Q ss_pred cccchhhhhhhhhcCCCceEEE-EEecCC---CCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEe
Q 014549 262 YTKESMGKNFLAKTGPHKVKVI-FFSKTG---ERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFL 337 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl-~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lf 337 (423)
++.++ +.+.+.....++++|+ |+++.+ ....|.+..++.+|. .+.|+.+...+. .++|+|.+.||+++|
T Consensus 15 i~~~~-~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~v~~~~vd~~~~-----~~~~~i~~~Pt~~~~ 87 (135)
T 2dbc_A 15 ISGNQ-YVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-ETKFVKAIVNSC-----IEHYHDNCLPTIFVY 87 (135)
T ss_dssp CCHHH-HHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-SEEEEEECCSSS-----CSSCCSSCCSEEEEE
T ss_pred cCHHH-HHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-CcEEEEEEhhcC-----cccCCCCCCCEEEEE
Confidence 44444 3444433323345555 444422 224566777887773 567777654332 278999999999999
Q ss_pred cCCCcceeEecCCC-------ChhHHHHHHHhhc
Q 014549 338 KDPGVKPVVYYGSF-------NNSRLSEVMEQNK 364 (423)
Q Consensus 338 k~~~~~~~~y~g~~-------~~~~l~~fi~~~~ 364 (423)
+++... ..+.|.. +.+.|.++|.++.
T Consensus 88 ~~G~~v-~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 88 KNGQIE-GKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp SSSSCS-EEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred ECCEEE-EEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 865432 3344543 6788999999864
No 397
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=96.33 E-value=0.0086 Score=54.92 Aligned_cols=97 Identities=5% Similarity=-0.112 Sum_probs=63.0
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHh------hC--CCC------------c
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE------RK--PIG------------Q 210 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~------~~--~~~------------~ 210 (423)
.+++++.|| ++||+.|..-.|.+.++.++++.. +.+..|.++........++ ++ ++. .
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~~~~~~~~~~i~~~~~~~~~~~fpil~D~~~~va~ 108 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNVADHKEWSEDVKCLSGVKGDMPYPIIADETRELAV 108 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHHTCCSSCSSCEEECTTCHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHhhCcccCCceEEEECChHHHHH
Confidence 347788888 899999999999999999998764 7888888874332222333 22 221 2
Q ss_pred ccccc------------CccEEEEeCCCCCCCCCccccc----CCCCHHHHHHHHHHh
Q 014549 211 IFFRR------------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (423)
Q Consensus 211 ~~~i~------------~~Pti~~f~~g~~~~~~~~~y~----G~~~~~~l~~fi~~~ 252 (423)
.|++. ..|++.++-+.... ...+. ..++.++|++.+...
T Consensus 109 ~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I---~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 109 KLGMVDPDERTSTGMPLTCRAVFIIGPDKKL---KLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp HTTCEEEEEECTTCCEEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred HhCCcCcccccCCCcccccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 23343 46898888655432 11221 246788898888654
No 398
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.15 E-value=0.0034 Score=47.61 Aligned_cols=80 Identities=9% Similarity=-0.036 Sum_probs=46.6
Q ss_pred EEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch-hhhHHHhhCCCCccccccCccEEEEeCCCCCCCCCcc
Q 014549 156 WLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR-LATHLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMT 234 (423)
Q Consensus 156 ~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~-~~~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~ 234 (423)
-++.|++|||++|++..+.+++.. -...+..||..++. ...++.+..|.. .+.+.++|++.+ +|..
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~~----i~~~~~~vd~~~~~~~~~el~~~~g~~-~~~~~~vP~i~i--~g~~------ 71 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEENN----IAFDETIIDDYAQRSKFYDEMNQSGKV-IFPISTVPQIFI--DDEH------ 71 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTT----CCCEEEECCSHHHHHHHHHHHHTTTCC-SSCCCSSCEEEE--TTEE------
T ss_pred EEEEEEcCCChhHHHHHHHHHHcC----CCceEEEeecCCChhHHHHHHHHhCCC-CCCCCccCEEEE--CCEE------
Confidence 467788999999999887765432 12344445544321 124577777720 011389999854 5532
Q ss_pred cccCCCCHHHHHHHHHHh
Q 014549 235 RFEGELSVDAVTDWFATA 252 (423)
Q Consensus 235 ~y~G~~~~~~l~~fi~~~ 252 (423)
-| ..+++.+++.+.
T Consensus 72 --i~--g~~~i~~~~~~~ 85 (89)
T 3msz_A 72 --IG--GFTELKANADKI 85 (89)
T ss_dssp --EE--SHHHHHHTHHHH
T ss_pred --Ee--ChHHHHHHHHHH
Confidence 23 346677766554
No 399
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.15 E-value=0.0061 Score=49.51 Aligned_cols=97 Identities=19% Similarity=0.211 Sum_probs=60.5
Q ss_pred cccchhhhhhhhhc-CCCceEEEEE-ec-C--CCCCchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEE
Q 014549 262 YTKESMGKNFLAKT-GPHKVKVIFF-SK-T--GERASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVF 336 (423)
Q Consensus 262 it~~~~~~~fl~~~-~~~~~~vl~f-~~-~--~~~~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~l 336 (423)
+++.+.++..+... ..+++++++| ++ + +....+.+..++..+. .+.|+.+... +...++++|+|.+.|++++
T Consensus 19 i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~v~~~~v~~~--~~~~~~~~~~v~~~Pt~~~ 95 (130)
T 1wmj_A 19 CHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-GAVFLKVDVD--ELKEVAEKYNVEAMPTFLF 95 (130)
T ss_dssp CSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-TBCCEECCTT--TSGGGHHHHTCCSSCCCCB
T ss_pred cCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-CCEEEEEecc--chHHHHHHcCCCccceEEE
Confidence 43333344445432 2234555544 43 2 3345677787887775 4666666432 2367999999999999999
Q ss_pred ecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 337 LKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 337 fk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
|+++. ....+.| .+.+.|.++|++.
T Consensus 96 ~~~g~-~~~~~~g-~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 96 IKDGA-EADKVVG-ARKDDLQNTIVKH 120 (130)
T ss_dssp CTTTT-CCBCCCT-TCTTTHHHHHHHH
T ss_pred EeCCe-EEEEEeC-CCHHHHHHHHHHH
Confidence 96543 3234466 5778899999874
No 400
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.06 E-value=0.012 Score=47.32 Aligned_cols=70 Identities=20% Similarity=0.190 Sum_probs=48.1
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCC---CcceeEecCCCChhHHHHHHHhhccc
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP---GVKPVVYYGSFNNSRLSEVMEQNKLQ 366 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~---~~~~~~y~g~~~~~~l~~fi~~~~~~ 366 (423)
.+.+..++..+ ..+.|+.+...+ ...++++|+|.+.|++++|+++ +..-..+.|..+ ..|.+.+.++.-+
T Consensus 42 ~~~l~~l~~~~-~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~ 114 (118)
T 2f51_A 42 GQILPSIAEAN-KDVTFIKVDVDK--NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHH 114 (118)
T ss_dssp HHHHHHHHHHC-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC--
T ss_pred HHHHHHHHHHC-CCeEEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhc
Confidence 45566677777 667777776432 3679999999999999999762 222234567654 5699999887644
No 401
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=95.94 E-value=0.0021 Score=53.32 Aligned_cols=70 Identities=11% Similarity=0.250 Sum_probs=46.8
Q ss_pred CCcccccCCCCcEEEEEecCCCcccccc-HHHHHHHHHHhhccceEEEEEcccch----hhhHHHhhCCCCccccccCcc
Q 014549 144 EDFPSIFHDSKPWLIQVYSDGSYLCGQF-SGAWKTIAALLEGIANTGMVELGDIR----LATHLAERKPIGQIFFRRGLP 218 (423)
Q Consensus 144 ~nf~~~v~~~~~~lV~FYapwC~~C~~~-~p~~~~~A~~l~~~~~~~~Vdc~~~~----~~~~l~~~~~~~~~~~i~~~P 218 (423)
+.+++++...+ ++.|+.|||++|++. .+.+++... ..+.+-.+|.+.+. ....|.+.+| +.++|
T Consensus 28 ~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~~~---~~i~~~~vdvd~~~~~~~~~~~L~~~~g------~~tVP 96 (129)
T 3ctg_A 28 AHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQELNV---PKSKALVLELDEMSNGSEIQDALEEISG------QKTVP 96 (129)
T ss_dssp HHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTSCC---CGGGEEEEEGGGSTTHHHHHHHHHHHHS------CCSSC
T ss_pred HHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhcCc---cCCCcEEEEccccCCHHHHHHHHHHHhC------CCCCC
Confidence 34555565444 678899999999988 777765431 12567777777442 1245777778 88999
Q ss_pred EEEEeCCC
Q 014549 219 SLVAFPPG 226 (423)
Q Consensus 219 ti~~f~~g 226 (423)
+| |.+|
T Consensus 97 ~v--fi~g 102 (129)
T 3ctg_A 97 NV--YING 102 (129)
T ss_dssp EE--EETT
T ss_pred EE--EECC
Confidence 96 4555
No 402
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.83 E-value=0.015 Score=47.31 Aligned_cols=56 Identities=13% Similarity=0.021 Sum_probs=43.6
Q ss_pred ceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 307 ASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 307 ~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
+.+..|.+.+.....++.+|+|.+.||+++|+++ ..-....|.++.+.|..|+++.
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G-~ev~Ri~G~~~~~~f~~~L~~~ 108 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGD-VESGRLEGYPGEDFFWPMLARL 108 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETT-EEEEEEECCCCHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECC-EEEeeecCCCCHHHHHHHHHHH
Confidence 5677777665444678999999999999999954 4444568999999999999873
No 403
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=95.76 E-value=0.022 Score=52.54 Aligned_cols=92 Identities=9% Similarity=0.079 Sum_probs=58.5
Q ss_pred hhhhhhhcCCCceEEE-EEecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcc
Q 014549 268 GKNFLAKTGPHKVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVK 343 (423)
Q Consensus 268 ~~~fl~~~~~~~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~ 343 (423)
+...+.....++++|+ |+++.+ .| ..|.+..+|..|.. +.|+.|.... ..++.+|+|.++||+++|+++...
T Consensus 123 f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~-v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~v 198 (245)
T 1a0r_P 123 FLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM-VKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGELL 198 (245)
T ss_dssp HHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-SEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEEE
T ss_pred HHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-CEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEEE
Confidence 4444433222445444 555422 22 45777778888854 7888876433 458899999999999999865332
Q ss_pred eeEecCC-------CChhHHHHHHHhhc
Q 014549 344 PVVYYGS-------FNNSRLSEVMEQNK 364 (423)
Q Consensus 344 ~~~y~g~-------~~~~~l~~fi~~~~ 364 (423)
..+.|. ++.+.|..||.++.
T Consensus 199 -~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 199 -SNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp -EEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred -EEEeCCcccccccccHHHHHHHHHHcC
Confidence 223332 45678999999864
No 404
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=94.69 E-value=0.0018 Score=53.00 Aligned_cols=71 Identities=24% Similarity=0.224 Sum_probs=47.5
Q ss_pred CchHH---HHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecC-CCcc--eeEecCCCChhHHHHHHHh
Q 014549 292 ASPFV---RQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKD-PGVK--PVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 292 ~~~~~---~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~-~~~~--~~~y~g~~~~~~l~~fi~~ 362 (423)
..+.+ ..++..+...+.++.+...+.+...++++|+|.++|++++|.. ++.. ...+.|..+.+.|.++|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~ 113 (130)
T 2lst_A 37 MNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQ 113 (130)
Confidence 34555 5555555555566666543333467999999999999999942 2333 3346788888888888876
No 405
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=95.65 E-value=0.041 Score=44.34 Aligned_cols=67 Identities=22% Similarity=0.338 Sum_probs=49.0
Q ss_pred hHHHHHHHhccccceEEEEEccc---------------------cccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCC
Q 014549 294 PFVRQISRNYWAYASFAFVLWRE---------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~---------------------~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~ 352 (423)
+.+..++.++. .+.+..+...+ .....+++.|++.+.|+++++..++... .+.|..+
T Consensus 45 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~ 122 (136)
T 1zzo_A 45 PVVGQVAASHP-EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMS 122 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCC
T ss_pred HHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCC
Confidence 44555666665 67777776533 1135688999999999999996555444 6789889
Q ss_pred hhHHHHHHHh
Q 014549 353 NSRLSEVMEQ 362 (423)
Q Consensus 353 ~~~l~~fi~~ 362 (423)
.+.|.++|++
T Consensus 123 ~~~l~~~l~~ 132 (136)
T 1zzo_A 123 QDELTRRVTA 132 (136)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 406
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=95.54 E-value=0.032 Score=45.68 Aligned_cols=68 Identities=13% Similarity=0.161 Sum_probs=48.2
Q ss_pred hHHHHHHHhcc-ccceEEEEEccc-----------------------cccHHHHhhcCCCCCCeEEEecCCCcceeEecC
Q 014549 294 PFVRQISRNYW-AYASFAFVLWRE-----------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYG 349 (423)
Q Consensus 294 ~~~~~~a~~~~-~~~~f~~v~~~~-----------------------~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g 349 (423)
+.+..++.+|. ..+.+..+.... .....+++.|++.+.|+++++...+.....+.|
T Consensus 54 ~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g 133 (145)
T 3erw_A 54 PQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIG 133 (145)
T ss_dssp HHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEES
T ss_pred HHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcC
Confidence 44555666765 456666665432 113578999999999999999655555556789
Q ss_pred CCChhHHHHHHH
Q 014549 350 SFNNSRLSEVME 361 (423)
Q Consensus 350 ~~~~~~l~~fi~ 361 (423)
..+.+.|.++|+
T Consensus 134 ~~~~~~l~~~l~ 145 (145)
T 3erw_A 134 PMTAEQLKEWTE 145 (145)
T ss_dssp CCCHHHHHHHHC
T ss_pred CcCHHHHHHhhC
Confidence 889999988873
No 407
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=95.53 E-value=0.0058 Score=61.78 Aligned_cols=90 Identities=10% Similarity=0.079 Sum_probs=55.6
Q ss_pred cccchhhhhhhhhcCCCceEEEEEecCC---CCCchHHHHHHHhccc--------cceEEEEEccccccHHHHhhcCCCC
Q 014549 262 YTKESMGKNFLAKTGPHKVKVIFFSKTG---ERASPFVRQISRNYWA--------YASFAFVLWREEESSIWWNTFEVES 330 (423)
Q Consensus 262 it~~~~~~~fl~~~~~~~~~vl~f~~~~---~~~~~~~~~~a~~~~~--------~~~f~~v~~~~~~~~~l~~~f~v~~ 330 (423)
++.++ ++..+.......++|.|+++.+ ....|.+..++..|.. .+.|+.|.... ..+++++|+|.+
T Consensus 28 Lt~~~-F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~--~~~la~~y~V~~ 104 (470)
T 3qcp_A 28 LSGDD-FSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCAS--EVDLCRKYDINF 104 (470)
T ss_dssp CSCSC-GGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTT--CHHHHHHTTCCS
T ss_pred CCHHH-HHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECCC--CHHHHHHcCCCc
Confidence 55555 4455543211225555666532 2345777778888762 36677765332 378999999999
Q ss_pred CCeEEEecCCC-cceeEecCCCChh
Q 014549 331 APAIVFLKDPG-VKPVVYYGSFNNS 354 (423)
Q Consensus 331 ~Ptl~lfk~~~-~~~~~y~g~~~~~ 354 (423)
+||+++|++++ ..+..|.|..+.+
T Consensus 105 ~PTlilf~~gg~~~~~~y~G~r~~e 129 (470)
T 3qcp_A 105 VPRLFFFYPRDSCRSNEECGTSSLE 129 (470)
T ss_dssp SCEEEEEEESSCCCTTSCCCCCCEE
T ss_pred cCeEEEEECCCceEEEEeeCCCCHH
Confidence 99999997654 3445566655443
No 408
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=95.52 E-value=0.014 Score=52.85 Aligned_cols=95 Identities=7% Similarity=-0.071 Sum_probs=60.1
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHh-------hCCCC------------ccccc
Q 014549 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE-------RKPIG------------QIFFR 214 (423)
Q Consensus 155 ~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~-------~~~~~------------~~~~i 214 (423)
.+|+.|+++||+.|..-.|.+.++.++++.. +.+..|.++.........+ +.++. ..|++
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~~~~~~~~~~i~~~~~~~~~~fpil~D~~~~va~~ygv 113 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSKESHDKWIEDIKYYGKLNKWEIPIVCDESRELANKLKI 113 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHHTCSCCCCCEEECTTSHHHHHHTC
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHHHhcCCCCcceeEECchhHHHHHhCC
Confidence 4555668999999999999999999998764 6888888874322222222 22221 22334
Q ss_pred c------------CccEEEEeCCCCCCCCCccccc----CCCCHHHHHHHHHHh
Q 014549 215 R------------GLPSLVAFPPGCKSSDCMTRFE----GELSVDAVTDWFATA 252 (423)
Q Consensus 215 ~------------~~Pti~~f~~g~~~~~~~~~y~----G~~~~~~l~~fi~~~ 252 (423)
. ..|++.++-+.+.. ...+. ..++.++|.+.+...
T Consensus 114 ~~~~~~~~~g~~~~~p~~flID~~G~I---~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 114 MDEQEKDITGLPLTCRCLFFISPEKKI---KATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp EEEEEECTTSCEEECEEEEEECTTSBE---EEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcccccCCCCCcccceEEEECCCCEE---EEEEecCCCCCCCHHHHHHHHHHH
Confidence 2 36888888654432 11221 357889998888654
No 409
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=95.51 E-value=0.051 Score=43.92 Aligned_cols=67 Identities=19% Similarity=0.362 Sum_probs=48.8
Q ss_pred hHHHHHHHhccccceEEEEEcccc--------------------ccHHHHhhcCCCCCCeEEEecCCCcceeEec---CC
Q 014549 294 PFVRQISRNYWAYASFAFVLWREE--------------------ESSIWWNTFEVESAPAIVFLKDPGVKPVVYY---GS 350 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~~--------------------~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~---g~ 350 (423)
+.+..++.++. .+.+..+...+. ....+++.|++.+.|+++++..++... .+. |.
T Consensus 44 ~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~ 121 (136)
T 1lu4_A 44 PSLSQVAAANP-AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAA 121 (136)
T ss_dssp HHHHHHHHHCT-TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSC
T ss_pred HHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCc
Confidence 44555666665 667777765431 135688999999999999996555444 677 88
Q ss_pred CChhHHHHHHHh
Q 014549 351 FNNSRLSEVMEQ 362 (423)
Q Consensus 351 ~~~~~l~~fi~~ 362 (423)
.+.+.|.++|++
T Consensus 122 ~~~~~l~~~l~~ 133 (136)
T 1lu4_A 122 MSQDELSGRVAA 133 (136)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 899999999986
No 410
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=95.47 E-value=0.053 Score=44.45 Aligned_cols=69 Identities=17% Similarity=0.193 Sum_probs=48.9
Q ss_pred hHHHHHHHhccccceEEEEEccc-------------------------cccHHHHhhcCCCCCCeEEEecCCCcceeEec
Q 014549 294 PFVRQISRNYWAYASFAFVLWRE-------------------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYY 348 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~-------------------------~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~ 348 (423)
+.+..++.+|.+.+.+..+.... .....+++.|++.+.|+++++..++.....+.
T Consensus 49 ~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~ 128 (148)
T 2b5x_A 49 PQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQA 128 (148)
T ss_dssp HHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEE
T ss_pred HHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEec
Confidence 44455666666557777776432 12357899999999999999955555445567
Q ss_pred CCCChhHHHHHHHh
Q 014549 349 GSFNNSRLSEVMEQ 362 (423)
Q Consensus 349 g~~~~~~l~~fi~~ 362 (423)
|..+.+.|.++|++
T Consensus 129 g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 129 GGSGMKMLEKRVNR 142 (148)
T ss_dssp SCSTTHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 88888889988876
No 411
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=95.41 E-value=0.011 Score=47.55 Aligned_cols=66 Identities=9% Similarity=0.210 Sum_probs=42.7
Q ss_pred CcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch---hh-hHHHhhCCCCccccccCccEE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR---LA-THLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~---~~-~~l~~~~~~~~~~~i~~~Pti 220 (423)
.+++.+++++ ++.|.+|||++|++..+.+++.. +.+-.+|.+... .. ..+.+..| ..++|++
T Consensus 9 ~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~~------i~~~~~dvd~~~~~~~~~~~l~~~~g------~~tvP~v 74 (114)
T 3h8q_A 9 HLVGLIERSR--VVIFSKSYCPHSTRVKELFSSLG------VECNVLELDQVDDGARVQEVLSEITN------QKTVPNI 74 (114)
T ss_dssp HHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHTT------CCCEEEETTTSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHcC------CCcEEEEecCCCChHHHHHHHHHHhC------CCccCEE
Confidence 3455555554 34499999999999888877642 456677776321 11 23555666 7799998
Q ss_pred EEeCCC
Q 014549 221 VAFPPG 226 (423)
Q Consensus 221 ~~f~~g 226 (423)
.+ +|
T Consensus 75 fi--~g 78 (114)
T 3h8q_A 75 FV--NK 78 (114)
T ss_dssp EE--TT
T ss_pred EE--CC
Confidence 55 55
No 412
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=95.19 E-value=0.045 Score=39.77 Aligned_cols=70 Identities=10% Similarity=0.152 Sum_probs=46.5
Q ss_pred EEEEEecC-CCC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCC-ChhHH
Q 014549 281 KVIFFSKT-GER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRL 356 (423)
Q Consensus 281 ~vl~f~~~-~~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~-~~~~l 356 (423)
.|.|+++. ..| ..+.+..++.++...+.+..+. ..+++++|+|.+.|++++ ++ +.+. .|.. +.+.|
T Consensus 3 ~v~f~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G--~~~~-~G~~~~~~~l 72 (77)
T 1ilo_A 3 KIQIYGTGCANCQMLEKNAREAVKELGIDAEFEKIK-----EMDQILEAGLTALPGLAV--DG--ELKI-MGRVASKEEI 72 (77)
T ss_dssp EEEEECSSSSTTHHHHHHHHHHHHHTTCCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TT--EEEE-CSSCCCHHHH
T ss_pred EEEEEcCCChhHHHHHHHHHHHHHHcCCceEEEEec-----CHHHHHHCCCCcCCEEEE--CC--EEEE-cCCCCCHHHH
Confidence 45566642 233 3456677777776556665553 467899999999999988 22 3333 3877 88888
Q ss_pred HHHH
Q 014549 357 SEVM 360 (423)
Q Consensus 357 ~~fi 360 (423)
.+|+
T Consensus 73 ~~~l 76 (77)
T 1ilo_A 73 KKIL 76 (77)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8775
No 413
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=95.05 E-value=0.0091 Score=52.88 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=34.9
Q ss_pred CCcEEEEEecCCCccccccHHHH---HHHHHHhhccceEEEEEcc
Q 014549 153 SKPWLIQVYSDGSYLCGQFSGAW---KTIAALLEGIANTGMVELG 194 (423)
Q Consensus 153 ~~~~lV~FYapwC~~C~~~~p~~---~~~A~~l~~~~~~~~Vdc~ 194 (423)
.++.+|+|++.||+||+++.|.+ +++.+.+.+.++|..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999986 6888888766777666654
No 414
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=95.03 E-value=0.15 Score=43.84 Aligned_cols=43 Identities=7% Similarity=0.199 Sum_probs=34.7
Q ss_pred CCCcEEEEEecCCCc-cccccHHHHHHHHHHhhcc---ceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSY-LCGQFSGAWKTIAALLEGI---ANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~-~C~~~~p~~~~~A~~l~~~---~~~~~Vdc~ 194 (423)
.+++++|.||.+||+ .|....+.+.++.+.++.. +.+..|.++
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD 77 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD 77 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC
Confidence 468999999999996 6999999999888877532 567777765
No 415
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=94.71 E-value=0.1 Score=43.28 Aligned_cols=70 Identities=14% Similarity=0.247 Sum_probs=48.7
Q ss_pred hHHHHHHHhccc-cceEEEEEccccc--------------------cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCC
Q 014549 294 PFVRQISRNYWA-YASFAFVLWREEE--------------------SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFN 352 (423)
Q Consensus 294 ~~~~~~a~~~~~-~~~f~~v~~~~~~--------------------~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~ 352 (423)
+.+..+...|.+ .+.+..|...+.. ...+++.|++.+.|+++++...+.....+.|..+
T Consensus 46 ~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~ 125 (151)
T 2f9s_A 46 PYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMT 125 (151)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCC
T ss_pred HHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCC
Confidence 344555666654 3666666543321 2468899999999999999555555555678888
Q ss_pred hhHHHHHHHhh
Q 014549 353 NSRLSEVMEQN 363 (423)
Q Consensus 353 ~~~l~~fi~~~ 363 (423)
.+.|.++|+..
T Consensus 126 ~~~l~~~l~~l 136 (151)
T 2f9s_A 126 ESMIHDYMNLI 136 (151)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 89999999873
No 416
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=94.66 E-value=0.13 Score=42.44 Aligned_cols=71 Identities=10% Similarity=0.236 Sum_probs=48.0
Q ss_pred chHHHHHHHhccc-cceEEEEEccccc---------------------cHHHHhhcCCCCCCeEEEecCCCcceeEecCC
Q 014549 293 SPFVRQISRNYWA-YASFAFVLWREEE---------------------SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS 350 (423)
Q Consensus 293 ~~~~~~~a~~~~~-~~~f~~v~~~~~~---------------------~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~ 350 (423)
.+.+..+...+.+ .+.+..|...... ...+.+.|++.+.|+++++...+.....+.|.
T Consensus 49 ~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 128 (152)
T 2lja_A 49 LPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTR 128 (152)
T ss_dssp HHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCC
T ss_pred hHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCC
Confidence 4555666666654 2556666543321 12688999999999999997555444445677
Q ss_pred CChhHHHHHHHhh
Q 014549 351 FNNSRLSEVMEQN 363 (423)
Q Consensus 351 ~~~~~l~~fi~~~ 363 (423)
.+.+.|.++|+..
T Consensus 129 ~~~~~l~~~l~~~ 141 (152)
T 2lja_A 129 PSDPKTAEKFNEL 141 (152)
T ss_dssp TTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 7888999998873
No 417
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=94.59 E-value=0.03 Score=48.93 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=44.9
Q ss_pred CCCCcEEEEEecCCCccccc-cHHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHhhCC
Q 014549 151 HDSKPWLIQVYSDGSYLCGQ-FSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~-~~p~~~~~A~~l~~~-~-~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
....++|+.|++.||+.|.. -.|.|.+.+.+++.. + .+..|.++........+++.+
T Consensus 46 ~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~~~~~~f~~~~~ 105 (176)
T 4f82_A 46 AGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDAFVMGAWGRDLH 105 (176)
T ss_dssp TTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTT
T ss_pred CCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCHHHHHHHHHHhC
Confidence 44445666777999999998 899999999999765 5 788898886555666788877
No 418
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.35 E-value=0.02 Score=47.21 Aligned_cols=69 Identities=16% Similarity=0.140 Sum_probs=42.5
Q ss_pred CcccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccch---hh-hHHHhhCCCCccccccCccEE
Q 014549 145 DFPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIR---LA-THLAERKPIGQIFFRRGLPSL 220 (423)
Q Consensus 145 nf~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~---~~-~~l~~~~~~~~~~~i~~~Pti 220 (423)
+|+++++... ++.|..+||++|++....+++. ..-.+.+..+|.+.+. .. ..+.+..| ...+|+|
T Consensus 6 ~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~---~~~~v~~~~idid~~~d~~~~~~~l~~~~G------~~tVP~I 74 (127)
T 3l4n_A 6 EYSLILDLSP--IIIFSKSTCSYSKGMKELLENE---YQFIPNYYIIELDKHGHGEELQEYIKLVTG------RGTVPNL 74 (127)
T ss_dssp HHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH---EEEESCCEEEEGGGSTTHHHHHHHHHHHHS------CCSSCEE
T ss_pred HHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh---cccCCCcEEEEecCCCCHHHHHHHHHHHcC------CCCcceE
Confidence 4666666555 6788999999999988777652 1001355666666321 11 22334446 6789997
Q ss_pred EEeCCC
Q 014549 221 VAFPPG 226 (423)
Q Consensus 221 ~~f~~g 226 (423)
. .+|
T Consensus 75 f--I~G 78 (127)
T 3l4n_A 75 L--VNG 78 (127)
T ss_dssp E--ETT
T ss_pred E--ECC
Confidence 4 455
No 419
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.09 E-value=0.12 Score=43.47 Aligned_cols=42 Identities=14% Similarity=0.222 Sum_probs=33.2
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCC--ChhHHHHHHHh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~--~~~~l~~fi~~ 362 (423)
..++++|+|.++|+++++..++.....+ |.. +.+.+.++|+.
T Consensus 106 ~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~ 149 (154)
T 2ju5_A 106 QELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKS 149 (154)
T ss_dssp HHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHH
Confidence 4789999999999999995444444455 877 78888888876
No 420
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=94.05 E-value=0.051 Score=49.38 Aligned_cols=51 Identities=6% Similarity=-0.076 Sum_probs=36.9
Q ss_pred CCcEEEEEecCC-Ccccc-----ccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVYSDG-SYLCG-----QFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FYapw-C~~C~-----~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
+++++|.||+.| |+.|. .-.+.+.+. +.| +.|..|+++........+++++
T Consensus 48 Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~~g-v~VvgIS~Ds~~~~~~f~~~~g 104 (224)
T 3keb_A 48 HTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---WPH-LKLIVITVDSPSSLARARHEHG 104 (224)
T ss_dssp TCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---CTT-SEEEEEESSCHHHHHHHHHHHC
T ss_pred CCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---cCC-CEEEEEECCCHHHHHHHHHHcC
Confidence 568899999988 99999 666666665 433 5778888875444555667666
No 421
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=93.95 E-value=0.19 Score=41.59 Aligned_cols=44 Identities=16% Similarity=0.224 Sum_probs=35.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+++.|++...|+++++...+.....|.|..+.+.|.++|+..
T Consensus 96 ~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 96 KAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp CHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 56899999999999999965555555678888888999998873
No 422
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=93.91 E-value=0.23 Score=39.60 Aligned_cols=43 Identities=16% Similarity=0.267 Sum_probs=35.2
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+.+.|++.+.|+++++...+.....+.|..+.+.|.++|++
T Consensus 94 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 94 GKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp CHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred hHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 4689999999999999996555555567888888999998876
No 423
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=93.74 E-value=0.25 Score=40.85 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=35.7
Q ss_pred HHHHhhcC--CCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 320 SIWWNTFE--VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~--v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+++.|+ +.+.|+++++...+.....+.|..+.+.|.++|++
T Consensus 93 ~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 137 (151)
T 3raz_A 93 RNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKL 137 (151)
T ss_dssp HHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 56788899 88999999996666666667899999999999887
No 424
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=93.61 E-value=0.046 Score=47.09 Aligned_cols=41 Identities=17% Similarity=0.113 Sum_probs=33.1
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEE
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVE 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vd 192 (423)
+..+.+|+|++-.|+||+++.|.+.++.+.+.+.+++..+.
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEe
Confidence 46789999999999999999999998888776555555444
No 425
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=93.33 E-value=0.35 Score=39.39 Aligned_cols=81 Identities=11% Similarity=0.188 Sum_probs=48.7
Q ss_pred ceEEE-EEec-CCCC--CchHHHHHHHhc-ccc-ceEEEEEccccc-----------------------cHHHHhhcCCC
Q 014549 279 KVKVI-FFSK-TGER--ASPFVRQISRNY-WAY-ASFAFVLWREEE-----------------------SSIWWNTFEVE 329 (423)
Q Consensus 279 ~~~vl-~f~~-~~~~--~~~~~~~~a~~~-~~~-~~f~~v~~~~~~-----------------------~~~l~~~f~v~ 329 (423)
+++++ |++. +..| ..+.+..++.+| .+. +.+..|...... ...+++.|++.
T Consensus 34 k~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~ 113 (148)
T 3fkf_A 34 RYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAIL 113 (148)
T ss_dssp SEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCC
T ss_pred cEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCC
Confidence 35555 4443 2233 245556677777 443 666666544322 34789999999
Q ss_pred CCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 330 SAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 330 ~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+.|+++++...+... +... +.+.|.++|++
T Consensus 114 ~~P~~~lid~~G~i~--~~~~-~~~~l~~~l~~ 143 (148)
T 3fkf_A 114 TLPTNILLSPTGKIL--ARDI-QGEALTGKLKE 143 (148)
T ss_dssp SSSEEEEECTTSBEE--EESC-CHHHHHHHHHH
T ss_pred CcCEEEEECCCCeEE--EecC-CHHHHHHHHHH
Confidence 999999995444322 2222 67778888776
No 426
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=93.27 E-value=0.33 Score=40.10 Aligned_cols=45 Identities=13% Similarity=0.138 Sum_probs=37.2
Q ss_pred cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 319 ~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
...+++.|++.+.|+++++...+.....+.|..+.+.|.++|+++
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLA 142 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHT
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhc
Confidence 467899999999999999865555555678888999999999884
No 427
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=93.08 E-value=0.49 Score=38.48 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=47.7
Q ss_pred CceEEEE-Eec-CCCC--CchHHHHHHHhcccc-ceEEEEEccccccHH-------------------------HHhhcC
Q 014549 278 HKVKVIF-FSK-TGER--ASPFVRQISRNYWAY-ASFAFVLWREEESSI-------------------------WWNTFE 327 (423)
Q Consensus 278 ~~~~vl~-f~~-~~~~--~~~~~~~~a~~~~~~-~~f~~v~~~~~~~~~-------------------------l~~~f~ 327 (423)
++++++. ++. +..| ..+.+..+...|.+. +.+..|...+. .+ +++.|+
T Consensus 31 gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 108 (148)
T 3hcz_A 31 AKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERK--DEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYD 108 (148)
T ss_dssp CSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSS--SHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHC
T ss_pred CCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCC--HHHHHHHHHHcCCCCceEEeccccchhHHHhcC
Confidence 3455554 443 2223 345666677777654 66666654322 22 889999
Q ss_pred CCCCCeEEEecCCCcceeEecCCCChhHHHHHH
Q 014549 328 VESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (423)
Q Consensus 328 v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi 360 (423)
+.+.|+++++...+.....+.|..+.+.+.+.+
T Consensus 109 i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l 141 (148)
T 3hcz_A 109 IYATPVLYVLDKNKVIIAKRIGYENLDDFLVQY 141 (148)
T ss_dssp CCSSCEEEEECTTCBEEEESCCGGGHHHHHHHH
T ss_pred cCCCCEEEEECCCCcEEEecCCHHHHHHHHHHH
Confidence 999999999955554444445654444444433
No 428
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=92.73 E-value=0.079 Score=41.91 Aligned_cols=38 Identities=13% Similarity=0.120 Sum_probs=31.1
Q ss_pred cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 319 ~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+++++|+|.++||+++ ++ + .|.|..+.+.|.+|+.-
T Consensus 55 ~~~l~~~~~V~~~PT~~i--~G--~--~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 55 QAQECTEAGITSYPTWII--NG--R--TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCHHHHHTTCCSSSEEEE--TT--E--EEESCCCHHHHHHHHTC
T ss_pred hHHHHHHcCCeEeCEEEE--CC--E--EecCCCCHHHHHHHhCC
Confidence 467999999999999777 32 2 37899999999999854
No 429
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=92.41 E-value=0.26 Score=39.19 Aligned_cols=60 Identities=5% Similarity=0.147 Sum_probs=42.6
Q ss_pred chHHHHHHHhccccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHH
Q 014549 293 SPFVRQISRNYWAYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVM 360 (423)
Q Consensus 293 ~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi 360 (423)
.+.+..++.++. +.|..+++.+ .++++++|++. .|+|++|.++. .+ ..|.++.+.|.+||
T Consensus 47 ~~~L~~l~~e~~--i~~~~vDId~--d~~l~~~ygv~-VP~l~~~~dG~--~v-~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 47 IASLRVLQKKSW--FELEVINIDG--NEHLTRLYNDR-VPVLFAVNEDK--EL-CHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHSC--CCCEEEETTT--CHHHHHHSTTS-CSEEEETTTTE--EE-ECSSCCCHHHHHHH
T ss_pred HHHHHHHHHhcC--CeEEEEECCC--CHHHHHHhCCC-CceEEEEECCE--EE-EecCCCHHHHHHHh
Confidence 455555665552 6677776543 46789999997 99999997643 22 46888989999887
No 430
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=92.39 E-value=0.1 Score=45.35 Aligned_cols=43 Identities=19% Similarity=0.280 Sum_probs=34.6
Q ss_pred CCCcEEEEEecCCCccccccHHHH-HHHHHHhhccceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLEGIANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~-~~~A~~l~~~~~~~~Vdc~ 194 (423)
+..+.+|+||+++|++|..+.+.. .++.+.+.+.+++-.+...
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 356788999999999999999999 8888887666666666544
No 431
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=92.30 E-value=0.54 Score=39.13 Aligned_cols=37 Identities=11% Similarity=0.245 Sum_probs=29.8
Q ss_pred CCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 327 ~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
++.+.|+++++...+.....+.|..+.+.|.++|+..
T Consensus 113 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 113 GITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp CSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 8889999999965555555668888899999999873
No 432
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=92.17 E-value=0.14 Score=46.52 Aligned_cols=57 Identities=11% Similarity=0.082 Sum_probs=41.2
Q ss_pred CcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCCccccccCccEEEE
Q 014549 154 KPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIGQIFFRRGLPSLVA 222 (423)
Q Consensus 154 ~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~~~~~i~~~Pti~~ 222 (423)
..-++.|..+||++|++....+++. .+.+-.+|.+++....++.+.+| ..++|+|.+
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g------~~~vP~~~~ 225 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSG------RTTVPQVFI 225 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTC------CSSSCEEEE
T ss_pred cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhC------CCCcCEEEE
Confidence 3446778899999999888766643 24566778775544466778888 789999853
No 433
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=92.10 E-value=0.56 Score=38.51 Aligned_cols=43 Identities=12% Similarity=0.099 Sum_probs=32.2
Q ss_pred HHHhhcCCCCCCeEEEecCCCcceeEecCCC--ChhHHHHHHHhh
Q 014549 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQN 363 (423)
Q Consensus 321 ~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~--~~~~l~~fi~~~ 363 (423)
.+++.|++.+.|+++++...+.....+.|.. +.+.|.++|++.
T Consensus 96 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~ 140 (152)
T 3gl3_A 96 QTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAA 140 (152)
T ss_dssp HHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHH
T ss_pred hhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHH
Confidence 5788899999999999965555444556643 457899999885
No 434
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.81 E-value=0.23 Score=39.53 Aligned_cols=57 Identities=5% Similarity=-0.063 Sum_probs=35.5
Q ss_pred EEEEEecCCCcccc------ccHHHHHHHHHHhhccceEEEEEcccchhhh-HHHhhC--------CCCccccccCccEE
Q 014549 156 WLIQVYSDGSYLCG------QFSGAWKTIAALLEGIANTGMVELGDIRLAT-HLAERK--------PIGQIFFRRGLPSL 220 (423)
Q Consensus 156 ~lV~FYapwC~~C~------~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~-~l~~~~--------~~~~~~~i~~~Pti 220 (423)
-++.|+.+||++|+ +....+++ -.+.+-.+|.+.++... .+.+.+ + ...+|+|
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~------~gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g------~~tvP~v 76 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA------NKIEFEEVDITMSEEQRQWMYKNVPPEKKPTQG------NPLPPQI 76 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCEEEEETTTCHHHHHHHHHSCCTTTCCSSS------SCCSCEE
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH------cCCCEEEEECCCCHHHHHHHHHHhcccccccCC------CCCCCEE
Confidence 36678899999998 44433322 12678889988554332 344454 4 6678986
Q ss_pred EEeCCC
Q 014549 221 VAFPPG 226 (423)
Q Consensus 221 ~~f~~g 226 (423)
. .+|
T Consensus 77 f--i~g 80 (111)
T 2ct6_A 77 F--NGD 80 (111)
T ss_dssp E--ETT
T ss_pred E--ECC
Confidence 4 455
No 435
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=91.69 E-value=0.83 Score=37.79 Aligned_cols=41 Identities=17% Similarity=0.355 Sum_probs=34.4
Q ss_pred HHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 322 l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+.+.|++.+.|+++++...+.....+.|..+.+.|.++|+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 152 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGS 152 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHH
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHH
Confidence 88999999999999997666555566898888889888876
No 436
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=91.50 E-value=0.79 Score=37.89 Aligned_cols=43 Identities=9% Similarity=0.242 Sum_probs=35.0
Q ss_pred HHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 321 ~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+++.|++.+.|+++++...+.....+.|..+.+.|.++|++.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 150 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATL 150 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 5899999999999999966565555667888888898888773
No 437
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=91.42 E-value=0.2 Score=37.66 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=36.8
Q ss_pred EEEEecC----CCccccccHHHHHHHHHHhhccceEEEEEcc-----cchh-hhHHHhhCCCCcccccc-----CccEEE
Q 014549 157 LIQVYSD----GSYLCGQFSGAWKTIAALLEGIANTGMVELG-----DIRL-ATHLAERKPIGQIFFRR-----GLPSLV 221 (423)
Q Consensus 157 lV~FYap----wC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~-----~~~~-~~~l~~~~~~~~~~~i~-----~~Pti~ 221 (423)
++.|+.+ ||++|++....+++. .+.+-.+|.+ +++. ..+|.+..| .. ++|+|.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~------gi~y~~idI~~~~~~~~~~~~~~l~~~~g------~~~~~~~tvP~v~ 69 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK------KQPFEFINIMPEKGVFDDEKIAELLTKLG------RDTQIGLTMPQVF 69 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT------TCCEEEEESCSBTTBCCHHHHHHHHHHHT------CSCCTTCCSCEEE
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc------CCCEEEEEeeccccccCHHHHHHHHHHhC------CCCCCCCccCEEE
Confidence 4567889 999998877666542 2466777776 4432 234666666 66 899865
Q ss_pred EeCCC
Q 014549 222 AFPPG 226 (423)
Q Consensus 222 ~f~~g 226 (423)
+ .+|
T Consensus 70 i-~~g 73 (87)
T 1aba_A 70 A-PDG 73 (87)
T ss_dssp C-TTS
T ss_pred E-ECC
Confidence 3 254
No 438
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=91.06 E-value=0.13 Score=42.86 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=39.5
Q ss_pred ccccCCCCcEEEEEec----CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCccEEE
Q 014549 147 PSIFHDSKPWLIQVYS----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 147 ~~~v~~~~~~lV~FYa----pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
++.+...+ ++|+.++ |||++|++....+++. .+.+..+|.++++.. ..|.+..| ...+|+|
T Consensus 29 ~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~ak~~L~~~------gv~y~~vdI~~d~~~~~~L~~~~G------~~tvP~V- 94 (135)
T 2wci_A 29 QRQIAENP-ILLYMKGSPKLPSCGFSAQAVQALAAC------GERFAYVDILQNPDIRAELPKYAN------WPTFPQL- 94 (135)
T ss_dssp HHHHHHCS-EEEEESBCSSSBSSHHHHHHHHHHHTT------CSCCEEEEGGGCHHHHHHHHHHHT------CCSSCEE-
T ss_pred HHHhccCC-EEEEEEecCCCCCCccHHHHHHHHHHc------CCceEEEECCCCHHHHHHHHHHHC------CCCcCEE-
Confidence 34444443 4444444 9999999888776543 256788888754332 23444445 6788986
Q ss_pred EeCCC
Q 014549 222 AFPPG 226 (423)
Q Consensus 222 ~f~~g 226 (423)
|.+|
T Consensus 95 -fI~G 98 (135)
T 2wci_A 95 -WVDG 98 (135)
T ss_dssp -EETT
T ss_pred -EECC
Confidence 4455
No 439
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=90.63 E-value=0.65 Score=38.65 Aligned_cols=44 Identities=11% Similarity=0.207 Sum_probs=35.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++.
T Consensus 111 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~ 154 (164)
T 2h30_A 111 GTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNP 154 (164)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCT
T ss_pred hHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 57899999999999999955555545567888999999999873
No 440
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=90.58 E-value=1.7 Score=36.61 Aligned_cols=56 Identities=18% Similarity=0.205 Sum_probs=37.3
Q ss_pred cceEEEEEccccccHHHHhhcCCCCCCeEEEecCC-CcceeEecCCCChhHHHHHHHh
Q 014549 306 YASFAFVLWREEESSIWWNTFEVESAPAIVFLKDP-GVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 306 ~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~-~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+..+...+.+...+.++|++.++|+++++... +..-..+.| .+.+.+.++|++
T Consensus 77 ~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 77 HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 33445555443334678999999999999999664 333333455 788887777665
No 441
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=90.15 E-value=0.92 Score=37.37 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=28.2
Q ss_pred cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 319 SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 319 ~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
...+++.|++.+.|+++++...+.....+ .+.+.|.++|+.
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 138 (152)
T 2lrn_A 98 VKDVLESYCIVGFPHIILVDPEGKIVAKE---LRGDDLYNTVEK 138 (152)
T ss_dssp HHHHHHHTTCCSSCEEEEECTTSEEEEEC---CCTTHHHHHHHH
T ss_pred hHHHHHHhCCCcCCeEEEECCCCeEEEee---CCHHHHHHHHHH
Confidence 35788999999999999995444332222 345677777776
No 442
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=90.03 E-value=1.1 Score=36.77 Aligned_cols=42 Identities=10% Similarity=0.179 Sum_probs=31.1
Q ss_pred HHHhhcCCCCCCeEEEecCCCcceeEecCCC--ChhHHHHHHHh
Q 014549 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (423)
Q Consensus 321 ~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~--~~~~l~~fi~~ 362 (423)
.+++.|++.+.|+++++...+.....+.|.. +...+.++|++
T Consensus 97 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 97 RVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 4888999999998888865555444556654 56788888877
No 443
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=89.72 E-value=0.25 Score=39.39 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=38.8
Q ss_pred cccCCCCcEEEEEec-----CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCccEEE
Q 014549 148 SIFHDSKPWLIQVYS-----DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 148 ~~v~~~~~~lV~FYa-----pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
++|+++.+ |.|.. |||++|++....+++. .+.+-.+|.++++.. ..|.+..| ...+|+|.
T Consensus 11 ~~i~~~~V--vlf~kg~~~~~~Cp~C~~ak~~L~~~------gi~y~~~di~~d~~~~~~l~~~~g------~~tvP~if 76 (111)
T 3zyw_A 11 KLTHAAPC--MLFMKGTPQEPRCGFSKQMVEILHKH------NIQFSSFDIFSDEEVRQGLKAYSS------WPTYPQLY 76 (111)
T ss_dssp HHHTSSSE--EEEESBCSSSBSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHT------CCSSCEEE
T ss_pred HHHhcCCE--EEEEecCCCCCcchhHHHHHHHHHHc------CCCeEEEECcCCHHHHHHHHHHHC------CCCCCEEE
Confidence 34444443 45667 9999999988666542 246677888755443 22333335 66899874
Q ss_pred EeCCC
Q 014549 222 AFPPG 226 (423)
Q Consensus 222 ~f~~g 226 (423)
.+|
T Consensus 77 --i~g 79 (111)
T 3zyw_A 77 --VSG 79 (111)
T ss_dssp --ETT
T ss_pred --ECC
Confidence 455
No 444
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=89.59 E-value=0.65 Score=38.23 Aligned_cols=44 Identities=14% Similarity=0.111 Sum_probs=33.2
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+++.|++.+.|+++++...+.....+.|..+.+.|.++|++.
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 46888999999998777754444444567888888888888763
No 445
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=88.78 E-value=0.8 Score=42.58 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=50.1
Q ss_pred cEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcc--c-------------chhhhHHHhhCCCCccccccCc--
Q 014549 155 PWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELG--D-------------IRLATHLAERKPIGQIFFRRGL-- 217 (423)
Q Consensus 155 ~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~--~-------------~~~~~~l~~~~~~~~~~~i~~~-- 217 (423)
..+..|.+++|++|.+.....++.+.... .+ .-.++.+ + ......+.+++| ++++
T Consensus 44 ~~VelyTs~gCp~C~~Ak~lL~~~~~~~~-vi-~l~~~v~~~dylgw~D~~a~~~~~~r~~~~~~~~G------~~tVyT 115 (270)
T 2axo_A 44 GVVELFTSQGCASCPPADEALRKMIQKGD-VV-GLSYHVDYWNYLGWTDSLASKENTERQYGYMRALG------RNGVYT 115 (270)
T ss_dssp CEEEEEECTTCTTCHHHHHHHHHHHHHTS-SE-EEEEECSTTCSSSSCCTTCCHHHHHHHHHHHHHTT------CSCCCS
T ss_pred cEEEEEeCCCCCChHHHHHHHHHhhccCC-ee-eEEEEEEEecccccccchhhhhhhHHHHHHHHHhC------CCcccC
Confidence 56677889999999999998888876532 21 1122211 1 011234777888 7788
Q ss_pred cEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 218 PSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 218 Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
|+|++ +|.. .. |..+.+.|.+.+.+.
T Consensus 116 PqI~I--ng~~------~v-~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 116 PQAIL--NGRD------HV-KGADVRGIYDRLDAF 141 (270)
T ss_dssp SEEEE--TTTE------EE-ETTCHHHHHHHHHHH
T ss_pred CEEEE--CCEE------ee-cCCCHHHHHHHHHHh
Confidence 98665 5542 12 334567787777654
No 446
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=88.74 E-value=0.48 Score=49.96 Aligned_cols=53 Identities=11% Similarity=0.050 Sum_probs=40.6
Q ss_pred hhcCCCCcccccccccccCCCCH--HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHH
Q 014549 29 VVLPRSFPPSHYDALGIKPYSSV--EQVKEAYEKFSSKWNSGEEIPSTADFLKIQYAYEL 86 (423)
Q Consensus 29 ~~~~~~~~~d~y~~lg~~~~a~~--~~ik~ayr~l~~~~hPd~~~~~~~~f~~i~~Ay~~ 86 (423)
..+..+...|||.+||++.+... .+|++|||++++..+++ .+++..+..|+.|
T Consensus 621 l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 621 LDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-----RHRYTLVDMANKV 675 (681)
T ss_dssp HHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-----HHHHHHHHHHHHH
T ss_pred HHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-----HHHHHHHHHhccc
Confidence 33455667789999999766655 66999999999976443 5688888888876
No 447
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=88.71 E-value=1.2 Score=37.74 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=31.2
Q ss_pred HhhcCCCCCCeEEEecCCCcceeEecCCCC-hhHHHHHHHh
Q 014549 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFN-NSRLSEVMEQ 362 (423)
Q Consensus 323 ~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~-~~~l~~fi~~ 362 (423)
.++|+|.+.|+++++...+.....+.|..+ .+.+.++|++
T Consensus 123 ~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 123 RVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp HHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred HHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 689999999999999544444344568887 8888888876
No 448
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=88.66 E-value=1.8 Score=35.77 Aligned_cols=71 Identities=7% Similarity=0.148 Sum_probs=44.8
Q ss_pred hHHHHHHHhcc-ccceEEEEEccc-----------------cccHHHHhhcCCCCCCeEEEecCCCcceeEecCCC--Ch
Q 014549 294 PFVRQISRNYW-AYASFAFVLWRE-----------------EESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF--NN 353 (423)
Q Consensus 294 ~~~~~~a~~~~-~~~~f~~v~~~~-----------------~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~--~~ 353 (423)
+.+..++.+|. ..+.+..+.... .....+.+.|++.+.|+++++...+.....+.|.. +.
T Consensus 61 ~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~ 140 (158)
T 3hdc_A 61 PSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDA 140 (158)
T ss_dssp HHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTS
T ss_pred HHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccch
Confidence 44555666665 345555555433 01357999999999999888866555555566654 45
Q ss_pred hHHHHHHHhhc
Q 014549 354 SRLSEVMEQNK 364 (423)
Q Consensus 354 ~~l~~fi~~~~ 364 (423)
.++.+.+..+.
T Consensus 141 ~~~~~~~~~~~ 151 (158)
T 3hdc_A 141 PKVVSYLKSLE 151 (158)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhhc
Confidence 56666666543
No 449
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=88.52 E-value=0.63 Score=35.41 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=35.0
Q ss_pred EEEEecCCCccc------cccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCccEEEEeCCC
Q 014549 157 LIQVYSDGSYLC------GQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 157 lV~FYapwC~~C------~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
++.|+++||+.| ++....+++ ..+.+-.+|.+.++.. ..+.+..|.. ...+|+|. .+|
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~------~~i~~~~~di~~~~~~~~~l~~~~g~~----~~~vP~if--i~g 68 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG------KRIQYQLVDISQDNALRDEMRTLAGNP----KATPPQIV--NGN 68 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH------TTCCCEEEETTSCHHHHHHHHHHTTCT----TCCSCEEE--ETT
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH------CCCceEEEECCCCHHHHHHHHHHhCCC----CCCCCEEE--ECC
Confidence 567889999999 555544332 1257778888754332 2345555511 34889874 455
No 450
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=88.19 E-value=1.8 Score=36.91 Aligned_cols=36 Identities=11% Similarity=0.197 Sum_probs=27.4
Q ss_pred CCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 327 EVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 327 ~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
++...|+++++...+.....+.|..+.+.|.++|+.
T Consensus 143 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 178 (183)
T 3lwa_A 143 PASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALP 178 (183)
T ss_dssp CTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHH
Confidence 567899888776555555567888888899988876
No 451
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=87.73 E-value=1.5 Score=36.47 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=31.0
Q ss_pred HHHhhcCCCCCCeEEEecCCCcceeEecCCC-ChhHHHHHHHh
Q 014549 321 IWWNTFEVESAPAIVFLKDPGVKPVVYYGSF-NNSRLSEVMEQ 362 (423)
Q Consensus 321 ~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~-~~~~l~~fi~~ 362 (423)
.+.+.|++...|+++++...+.. .+.|.. +.+.|.++|++
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i--~~~g~~~~~~~l~~~l~~ 161 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNV--LYAGTTPSLGELESVIKS 161 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCE--EEEEESCCHHHHHHHHHH
T ss_pred HHHHHhCCCCceEEEEEcCCCcE--EEeCCCCCHHHHHHHHHH
Confidence 68889999999999999544433 226777 78889888876
No 452
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=87.60 E-value=0.49 Score=37.41 Aligned_cols=50 Identities=14% Similarity=0.092 Sum_probs=32.4
Q ss_pred CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCccEEEEeCCC
Q 014549 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 163 pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
|||++|++....+++. .+.+-.+|.++++.. ..|.+..| ...+|++ |.+|
T Consensus 31 p~Cp~C~~ak~~L~~~------gi~~~~~dI~~~~~~~~~l~~~~g------~~tvP~i--fi~g 81 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL------NVPFEDVNILENEMLRQGLKEYSN------WPTFPQL--YIGG 81 (109)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCEEEEGGGCHHHHHHHHHHHT------CSSSCEE--EETT
T ss_pred CCChhHHHHHHHHHHc------CCCcEEEECCCCHHHHHHHHHHHC------CCCCCeE--EECC
Confidence 6999999988776653 246677887644332 33444446 6789976 4455
No 453
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=87.56 E-value=0.83 Score=41.04 Aligned_cols=52 Identities=10% Similarity=-0.064 Sum_probs=41.0
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHh
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAE 204 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~ 204 (423)
++.+++.|| ++||+.|..-.+.+.+...+++.. +.+..|.++....+..-++
T Consensus 52 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~sh~aw~~ 105 (216)
T 3sbc_A 52 GKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEYSLLAWTN 105 (216)
T ss_dssp TSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHT
T ss_pred CCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchhhHHHHHH
Confidence 567888999 899999999999999999999865 6888888884433333443
No 454
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=87.51 E-value=0.43 Score=42.27 Aligned_cols=43 Identities=14% Similarity=0.137 Sum_probs=32.8
Q ss_pred CCCcEEEEEecCCCccccccHHHH-HHHHHHh--hccceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALL--EGIANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~-~~~A~~l--~~~~~~~~Vdc~ 194 (423)
+.++.+|+|....|++|+++.+.. ..+.+.+ .|.++|...+..
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 467789999999999999999875 5666666 456777666654
No 455
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=87.40 E-value=3.6 Score=33.53 Aligned_cols=40 Identities=18% Similarity=0.223 Sum_probs=27.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+.+.|++...|+++++...+.....+ .+.+.+.+.|++
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~i~~~~---~~~~~l~~~l~~ 145 (150)
T 3fw2_A 106 SEVAKQYSIYKIPANILLSSDGKILAKN---LRGEELKKKIEN 145 (150)
T ss_dssp CHHHHHTTCCSSSEEEEECTTSBEEEES---CCHHHHHHHHHH
T ss_pred hHHHHHcCCCccCeEEEECCCCEEEEcc---CCHHHHHHHHHH
Confidence 3789999999999999995444332222 256667776655
No 456
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=87.22 E-value=0.87 Score=36.79 Aligned_cols=53 Identities=9% Similarity=-0.044 Sum_probs=32.3
Q ss_pred CCCccccccHHHHHHHHHHhhccceEEEEEcccchhh-hHHHhhCCCCccccccCccEEEEeCCC
Q 014549 163 DGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLA-THLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 163 pwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~-~~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
|||++|++....+++..-. ...+-.+|..+++.. ..|.+..| ...+|+| |.+|
T Consensus 29 p~Cp~C~~ak~lL~~~gv~---~~~~~~~dv~~~~~~~~~l~~~sg------~~tvP~v--fI~g 82 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQGVD---PAKFAAYNVLEDPELREGIKEFSE------WPTIPQL--YVNK 82 (121)
T ss_dssp BCTTHHHHHHHHHHHHTBC---GGGEEEEECTTCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CCCccHHHHHHHHHHcCCC---cceEEEEEecCCHHHHHHHHHHhC------CCCCCeE--EECC
Confidence 6999999988777664210 012777887654433 23444445 6688987 4455
No 457
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=86.83 E-value=1.1 Score=39.16 Aligned_cols=55 Identities=9% Similarity=0.047 Sum_probs=41.3
Q ss_pred CCcEEEEEe-cCCCcccc-ccHHHHHHHHHHh-hcc-c-eEEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVY-SDGSYLCG-QFSGAWKTIAALL-EGI-A-NTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~-~~~p~~~~~A~~l-~~~-~-~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
++.+++.|| ..||+-|. .-.+.|.+.+.++ +.. + .|..|.++........|++.+
T Consensus 43 gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~~~~~~~~~~~ 102 (182)
T 1xiy_A 43 NKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIYVLKSWFKSMD 102 (182)
T ss_dssp TCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHHHHHHHHHHTT
T ss_pred CCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHHHHHHHHHHcC
Confidence 455666677 47999999 7888999999998 554 3 488888885545566788877
No 458
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=86.76 E-value=1.2 Score=37.20 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=31.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+++.|++...|+.+++...+.....+.|..+.+.+.++|+.
T Consensus 115 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 157 (168)
T 2b1k_A 115 GMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKP 157 (168)
T ss_dssp CHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHH
T ss_pred hHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 5688999999999776665445444456788888888777765
No 459
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=86.75 E-value=0.5 Score=38.16 Aligned_cols=50 Identities=6% Similarity=-0.013 Sum_probs=31.4
Q ss_pred CCCccccccHHHHHHHHHHhhccce-EEEEEcccchhhh-HHHhhCCCCccccccCccEEEEeCCC
Q 014549 163 DGSYLCGQFSGAWKTIAALLEGIAN-TGMVELGDIRLAT-HLAERKPIGQIFFRRGLPSLVAFPPG 226 (423)
Q Consensus 163 pwC~~C~~~~p~~~~~A~~l~~~~~-~~~Vdc~~~~~~~-~l~~~~~~~~~~~i~~~Pti~~f~~g 226 (423)
|||++|++....+++. .+. +-.+|.++++... .+.+..+ ...+|+| |.+|
T Consensus 33 p~Cp~C~~ak~lL~~~------gv~~~~~vdV~~d~~~~~~l~~~tg------~~tvP~v--fI~g 84 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH------GVRDYAAYNVLDDPELRQGIKDYSN------WPTIPQV--YLNG 84 (118)
T ss_dssp BSSHHHHHHHHHHHHT------TCCCCEEEESSSCHHHHHHHHHHHT------CCSSCEE--EETT
T ss_pred CccHHHHHHHHHHHHc------CCCCCEEEEcCCCHHHHHHHHHHhC------CCCcCeE--EECC
Confidence 6999999888766543 243 6777777544332 3333335 6789987 4455
No 460
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=86.44 E-value=0.85 Score=34.54 Aligned_cols=46 Identities=13% Similarity=0.183 Sum_probs=33.6
Q ss_pred EEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 309 FAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 309 f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+..+++.+ +++++++|++. .|+|++ .++. .+ .|.++.+.|.+||..
T Consensus 29 ~~~vdid~--~~~l~~~~g~~-vPtl~~-~~G~--~v--~g~~~~~~L~~~l~~ 74 (87)
T 1ttz_A 29 FFSVFIDD--DAALESAYGLR-VPVLRD-PMGR--EL--DWPFDAPRLRAWLDA 74 (87)
T ss_dssp EEEEECTT--CHHHHHHHTTT-CSEEEC-TTCC--EE--ESCCCHHHHHHHHHT
T ss_pred eEEEECCC--CHHHHHHhCCC-cCeEEE-ECCE--EE--eCCCCHHHHHHHHHH
Confidence 45555432 46799999998 999988 5433 22 288899999999976
No 461
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=85.43 E-value=2.1 Score=38.49 Aligned_cols=53 Identities=9% Similarity=0.080 Sum_probs=41.6
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhhhHHHhh
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLATHLAER 205 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~~~l~~~ 205 (423)
++.+++.|| ++||+.|..-...+.+...+++.. +.+..|.++....+...+++
T Consensus 56 GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~sh~~w~~~ 110 (219)
T 3tue_A 56 GKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQ 110 (219)
T ss_dssp TSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHHHHHHHHS
T ss_pred CCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhhHHHHhhh
Confidence 467888999 799999999999999999999876 68888888854334444443
No 462
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=85.36 E-value=0.8 Score=41.35 Aligned_cols=43 Identities=16% Similarity=0.166 Sum_probs=32.8
Q ss_pred CCCcEEEEEecCCCccccccHHH-HHHHHHHh--hccceEEEEEcc
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGA-WKTIAALL--EGIANTGMVELG 194 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~-~~~~A~~l--~~~~~~~~Vdc~ 194 (423)
+.++.+++|....|++|+++.|. ..++.+.+ .|.+++...+..
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 45678999999999999999986 57777676 456666655544
No 463
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=85.06 E-value=0.46 Score=40.39 Aligned_cols=68 Identities=18% Similarity=0.171 Sum_probs=38.5
Q ss_pred hHHHHHHHhccccceEEEEEccccccHHHHhhcCC--CCCCeEEEecCCCcceeEecCC----------CChhHHHHHHH
Q 014549 294 PFVRQISRNYWAYASFAFVLWREEESSIWWNTFEV--ESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVME 361 (423)
Q Consensus 294 ~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~v--~~~Ptl~lfk~~~~~~~~y~g~----------~~~~~l~~fi~ 361 (423)
|.+..++..+...+.|+.|...... ..++..|++ ..+||+++|..++.....+.|. .+.+.|.++|+
T Consensus 66 p~l~~~~~~~~~~~~~~~v~~d~~~-~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~ 144 (164)
T 1sen_A 66 PKFAESTEISELSHNFVMVNLEDEE-EPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMK 144 (164)
T ss_dssp HHHHTCHHHHHHHTTSEEEEEEGGG-SCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCeEEEEEecCCc-hHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHH
Confidence 4443333333334566776644321 226788888 5599999993333322223443 56778888877
Q ss_pred h
Q 014549 362 Q 362 (423)
Q Consensus 362 ~ 362 (423)
.
T Consensus 145 ~ 145 (164)
T 1sen_A 145 E 145 (164)
T ss_dssp H
T ss_pred H
Confidence 6
No 464
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=84.81 E-value=2.1 Score=36.74 Aligned_cols=44 Identities=2% Similarity=-0.045 Sum_probs=32.3
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeE---------ecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVV---------YYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~---------y~g~~~~~~l~~fi~~~ 363 (423)
..+++.|++...|+++++...+..... +.|..+.+.|.+.|++.
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~l 172 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDAL 172 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHH
Confidence 468899999999999999654443323 34666788888888874
No 465
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=84.55 E-value=4.9 Score=34.16 Aligned_cols=60 Identities=13% Similarity=0.234 Sum_probs=36.3
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCC----------CChhHHHHHHHhhccccCcccccccccccCCCC
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGS----------FNNSRLSEVMEQNKLQELPQLRSVTSMELGCDA 383 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~----------~~~~~l~~fi~~~~~~~lp~l~~~~~~~~~c~~ 383 (423)
..+++.|++...|+++++...+.. .+.|. .+.+.|.+.|+...... ...........|+-
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~i--~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~~--~~~~~~~~~~gc~~ 175 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRLL--RYHGRVNDNPKDPSKVQSHDLEAAIEALLRGE--EPPLKEAPAIGCTI 175 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCBE--EEEECSSSCTTCGGGCCCCHHHHHHHHHHTTC--CCCSSCCCCCSEEC
T ss_pred chHHHHcCCCCCCeEEEECCCCcE--EEEEecCCccccccccCHHHHHHHHHHHHcCC--CCCcccCCCCceEE
Confidence 468889999999999999544432 23333 35678888888743221 12222334455655
No 466
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=83.71 E-value=1.1 Score=42.66 Aligned_cols=94 Identities=11% Similarity=0.042 Sum_probs=54.2
Q ss_pred CCcEEEEEe-cCCCccccccHHHHHHHHHHhhccceEEEEEcccchhhhHHHhhCCCC------------cccccc----
Q 014549 153 SKPWLIQVY-SDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDIRLATHLAERKPIG------------QIFFRR---- 215 (423)
Q Consensus 153 ~~~~lV~FY-apwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~~~~~~l~~~~~~~------------~~~~i~---- 215 (423)
++++++.|| +.||+.|..-.+.+.+. ..+ .+.+..|+++........++++++. ..|+|.
T Consensus 24 Gk~vvl~F~p~~~tp~C~~e~~~~~~~--~~~-~~~v~gis~D~~~~~~~f~~~~~l~fp~l~D~~~~v~~~ygv~~~~~ 100 (322)
T 4eo3_A 24 GKYTILFFFPKAGTSGSTREAVEFSRE--NFE-KAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGK 100 (322)
T ss_dssp TSEEEEEECSSTTSHHHHHHHHHHHHS--CCT-TEEEEEEESCCHHHHHHHHHHHTCCSEEEECTTCHHHHHTTCEETTE
T ss_pred CCeEEEEEECCCCCCCCHHHHHHHHHH--hhC-CCEEEEEeCCCHHHHHHHHHhhCCceEEEEcCchHHHHhcCCCCCCc
Confidence 568899999 47899998655555431 122 2456667766433334455555443 334463
Q ss_pred CccEEEEeCCCCCCCCCcccccC---CCCHHHHHHHHHHh
Q 014549 216 GLPSLVAFPPGCKSSDCMTRFEG---ELSVDAVTDWFATA 252 (423)
Q Consensus 216 ~~Pti~~f~~g~~~~~~~~~y~G---~~~~~~l~~fi~~~ 252 (423)
.+|+..++-+.+.. ...|.+ ...++++++++.+.
T Consensus 101 ~~r~tfiId~~G~i---~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 101 TVRSTFLIDRWGFV---RKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp ECCEEEEECTTSBE---EEEEESCCSTTHHHHHHHHHHHH
T ss_pred CccEEEEECCCCEE---EEEEeCCCccccHHHHHHHHhhh
Confidence 35676666444332 223443 44578888888765
No 467
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=83.40 E-value=4.5 Score=34.27 Aligned_cols=43 Identities=14% Similarity=0.157 Sum_probs=33.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
..+++.|++...|+.+++...+.....+.|..+.+.+.++|..
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 164 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAP 164 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 5688899999999888886555555566788888888877766
No 468
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=83.33 E-value=0.78 Score=39.90 Aligned_cols=42 Identities=5% Similarity=-0.161 Sum_probs=31.1
Q ss_pred CCCCcEEEEEecCCCccccccHHHHHHHHHHh-hccceEEEEE
Q 014549 151 HDSKPWLIQVYSDGSYLCGQFSGAWKTIAALL-EGIANTGMVE 192 (423)
Q Consensus 151 ~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l-~~~~~~~~Vd 192 (423)
.+..+.+|+|....|++|+++.+...++-++. .|.+++.--+
T Consensus 12 g~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 12 GHGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp ECCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 45677899999999999999999887766654 4455544333
No 469
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=82.88 E-value=2 Score=36.21 Aligned_cols=48 Identities=21% Similarity=0.344 Sum_probs=33.4
Q ss_pred chHHHHHHHhccc--cceEEEEEcccccc----------------------HHHHhhcCCCCCCeEEEecCC
Q 014549 293 SPFVRQISRNYWA--YASFAFVLWREEES----------------------SIWWNTFEVESAPAIVFLKDP 340 (423)
Q Consensus 293 ~~~~~~~a~~~~~--~~~f~~v~~~~~~~----------------------~~l~~~f~v~~~Ptl~lfk~~ 340 (423)
.+.+..++.+|.+ .+.+..|...+... ..+++.|+|...|+++++...
T Consensus 67 ~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~ 138 (165)
T 3s9f_A 67 TPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNAD 138 (165)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCC
Confidence 3555667777764 45666665443311 578999999999999999754
No 470
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=82.28 E-value=2.4 Score=36.43 Aligned_cols=55 Identities=2% Similarity=-0.092 Sum_probs=42.9
Q ss_pred CCcEEEEEec-CCCccccccHHHHHHHHHHhhcc-c-eEEEEEcccchhhhHHHhhCC
Q 014549 153 SKPWLIQVYS-DGSYLCGQFSGAWKTIAALLEGI-A-NTGMVELGDIRLATHLAERKP 207 (423)
Q Consensus 153 ~~~~lV~FYa-pwC~~C~~~~p~~~~~A~~l~~~-~-~~~~Vdc~~~~~~~~l~~~~~ 207 (423)
++.+++.||. .||+-|..-.+.|.+.+.+++.. + .|..|.++........|++.+
T Consensus 42 gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~ 99 (171)
T 2xhf_A 42 GRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVD 99 (171)
T ss_dssp TSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHC
T ss_pred CCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcC
Confidence 4566677774 69999999999999999998854 4 488899886555566788777
No 471
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=81.85 E-value=2.4 Score=34.47 Aligned_cols=46 Identities=24% Similarity=0.431 Sum_probs=32.2
Q ss_pred chHHHHHHHhcc--ccceEEEEEccccc----------------------cHHHHhhcCCCCCCeEEEec
Q 014549 293 SPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVESAPAIVFLK 338 (423)
Q Consensus 293 ~~~~~~~a~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~v~~~Ptl~lfk 338 (423)
.+.+..++.+|. ..+.+..|...+.. ...+++.|+|.+.|+++++.
T Consensus 47 ~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid 116 (146)
T 1o8x_A 47 TPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVD 116 (146)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEE
Confidence 345566666776 35667777654321 25789999999999999996
No 472
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=81.73 E-value=2.2 Score=34.37 Aligned_cols=46 Identities=24% Similarity=0.421 Sum_probs=31.5
Q ss_pred chHHHHHHHhcc--ccceEEEEEccccc----------------------cHHHHhhcCCCCCCeEEEec
Q 014549 293 SPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVESAPAIVFLK 338 (423)
Q Consensus 293 ~~~~~~~a~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~v~~~Ptl~lfk 338 (423)
.+.+..++.++. ..+.+..+...+.. ...+++.|++...|+++++.
T Consensus 47 ~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 47 TPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116 (144)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEE
T ss_pred HHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEE
Confidence 345555666665 35666666544321 25689999999999999997
No 473
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=81.60 E-value=3.6 Score=34.52 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=33.8
Q ss_pred eEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCC-------CChhHHHHHHHh
Q 014549 308 SFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGS-------FNNSRLSEVMEQ 362 (423)
Q Consensus 308 ~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~-------~~~~~l~~fi~~ 362 (423)
.|+.|.+.+ +..+++..+++.+.||+++|+.++..-....|. +..+++.++|+.
T Consensus 79 ~fv~V~vD~-e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~ 139 (151)
T 3ph9_A 79 KFIMLNLMH-ETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIEN 139 (151)
T ss_dssp TCEEEEESS-CCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHH
T ss_pred CeEEEEecC-CchhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHH
Confidence 466676542 234467889999999999998544433233455 455555555554
No 474
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=81.16 E-value=1.4 Score=37.83 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=29.6
Q ss_pred CCCcEEEEEecCCCccccccHHHH-HHHHHHhh--ccceEEEEE
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAW-KTIAALLE--GIANTGMVE 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~-~~~A~~l~--~~~~~~~Vd 192 (423)
+.++.++.|+.+.|++|..+.+.. .++.+.+. +.+++.-..
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~ 53 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVN 53 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEE
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 456789999999999999999987 56766663 344444433
No 475
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=80.96 E-value=3.4 Score=39.89 Aligned_cols=44 Identities=14% Similarity=0.231 Sum_probs=34.3
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+++.|+|...|+++++...+.....+.|..+.+.|.++|++.
T Consensus 154 ~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 154 YATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp SHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 46889999999999999955555555567888888888887764
No 476
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=80.80 E-value=6.8 Score=33.09 Aligned_cols=69 Identities=9% Similarity=0.158 Sum_probs=43.0
Q ss_pred hHHHHHHHhcc-ccceEEEEEcccc--cc-HHHHhhcCCC-----------------------CCCeEEEecCCCcceeE
Q 014549 294 PFVRQISRNYW-AYASFAFVLWREE--ES-SIWWNTFEVE-----------------------SAPAIVFLKDPGVKPVV 346 (423)
Q Consensus 294 ~~~~~~a~~~~-~~~~f~~v~~~~~--~~-~~l~~~f~v~-----------------------~~Ptl~lfk~~~~~~~~ 346 (423)
+.+..+..+|. ..+.+..|..... +. ..+++++++. +.|+++++...+.....
T Consensus 80 ~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 159 (186)
T 1jfu_A 80 PALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEIAT 159 (186)
T ss_dssp HHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEEEE
Confidence 34455555665 3466666665432 11 4566777764 78999999655555455
Q ss_pred ecCCCC--hhHHHHHHHh
Q 014549 347 YYGSFN--NSRLSEVMEQ 362 (423)
Q Consensus 347 y~g~~~--~~~l~~fi~~ 362 (423)
+.|..+ .+.+.++|+.
T Consensus 160 ~~g~~~~~~~~l~~~l~~ 177 (186)
T 1jfu_A 160 IAGPAEWASEDALKLIRA 177 (186)
T ss_dssp EESCCCTTSHHHHHHHHH
T ss_pred EecCCccCHHHHHHHHHH
Confidence 667654 6788888876
No 477
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=80.14 E-value=2.7 Score=33.95 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=32.1
Q ss_pred chHHHHHHHhcc--ccceEEEEEccccc----------------------cHHHHhhcCCCCCCeEEEec
Q 014549 293 SPFVRQISRNYW--AYASFAFVLWREEE----------------------SSIWWNTFEVESAPAIVFLK 338 (423)
Q Consensus 293 ~~~~~~~a~~~~--~~~~f~~v~~~~~~----------------------~~~l~~~f~v~~~Ptl~lfk 338 (423)
.+.+..++.+|. ..+.+..|...+.. ...+++.|++...|+++++.
T Consensus 47 ~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid 116 (144)
T 1i5g_A 47 TPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVE 116 (144)
T ss_dssp HHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEE
T ss_pred HHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEE
Confidence 345566677776 35666677654321 25789999999999999996
No 478
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=80.03 E-value=3.6 Score=33.87 Aligned_cols=42 Identities=7% Similarity=0.072 Sum_probs=31.0
Q ss_pred HHHhhcCCCCCC---------------eEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 321 ~l~~~f~v~~~P---------------tl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+.+.|++...| +++++...+.....+.|..+.+.|.+.|+.
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 158 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIAT 158 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHH
Confidence 478899998778 677775555555556788888888887776
No 479
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=79.79 E-value=0.57 Score=44.14 Aligned_cols=73 Identities=7% Similarity=-0.038 Sum_probs=45.9
Q ss_pred eEEEEEecCC---CCCchHHHHHHHhccccceEEEEEcccc-c-cHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChh
Q 014549 280 VKVIFFSKTG---ERASPFVRQISRNYWAYASFAFVLWREE-E-SSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNS 354 (423)
Q Consensus 280 ~~vl~f~~~~---~~~~~~~~~~a~~~~~~~~f~~v~~~~~-~-~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~ 354 (423)
.++.|+.+.+ +...|.+..+|.++ .+..+...+. + .++++++|+|+++||+++ ++ + .|.|..+.+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l----~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G-~---~~~G~~~~~ 269 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV----PYVECSPNGPGTPQAQECTEAGITSYPTWII--NG-R---TYTGVRSLE 269 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS----CEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TT-E---EEESCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc----CEEEEeecCchhhHHHHHHHcCCcccCeEEE--CC-E---EecCCCCHH
Confidence 3566776532 22345555555433 3333332222 2 478999999999999655 33 2 378999999
Q ss_pred HHHHHHHh
Q 014549 355 RLSEVMEQ 362 (423)
Q Consensus 355 ~l~~fi~~ 362 (423)
+|.+|+..
T Consensus 270 ~L~~~l~~ 277 (291)
T 3kp9_A 270 ALAVASGY 277 (291)
T ss_dssp HHHHHTCC
T ss_pred HHHHHHCC
Confidence 99999864
No 480
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=79.68 E-value=1.7 Score=38.44 Aligned_cols=41 Identities=15% Similarity=0.101 Sum_probs=29.3
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHHH-Hh--hccceEEEEE
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIAA-LL--EGIANTGMVE 192 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A~-~l--~~~~~~~~Vd 192 (423)
+..+.||+|....|++|+++.+.....-+ .+ .|.+++.-.+
T Consensus 14 ~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~ 57 (205)
T 3gmf_A 14 AAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRN 57 (205)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEe
Confidence 45678999999999999999987655444 55 4555554433
No 481
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=79.06 E-value=0.84 Score=42.50 Aligned_cols=28 Identities=11% Similarity=-0.024 Sum_probs=23.6
Q ss_pred CCCcEEEEEecCCCccccccHHHHHHHH
Q 014549 152 DSKPWLIQVYSDGSYLCGQFSGAWKTIA 179 (423)
Q Consensus 152 ~~~~~lV~FYapwC~~C~~~~p~~~~~A 179 (423)
+.+..++.|..|.|++|+++.+..++..
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l 173 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHL 173 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHh
Confidence 4678999999999999999988877443
No 482
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=78.94 E-value=5.6 Score=33.84 Aligned_cols=79 Identities=6% Similarity=-0.156 Sum_probs=46.7
Q ss_pred ceEEE-EEecCC-CC--CchHHHHHHHhccccceEEEEEccccccHHHHhhcC---CCCCCeEEEecCCCcceeEecCCC
Q 014549 279 KVKVI-FFSKTG-ER--ASPFVRQISRNYWAYASFAFVLWREEESSIWWNTFE---VESAPAIVFLKDPGVKPVVYYGSF 351 (423)
Q Consensus 279 ~~~vl-~f~~~~-~~--~~~~~~~~a~~~~~~~~f~~v~~~~~~~~~l~~~f~---v~~~Ptl~lfk~~~~~~~~y~g~~ 351 (423)
+++++ |.++.| +| ..|.+..++..+. .+.|..+... +.++++.+|+ +.+.||+++|++++..-..+ |..
T Consensus 55 k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~-~v~~~~v~~d--~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 55 RYRLLVAGEMWCPDCQINLAALDFAQRLQP-NIELAIISKG--RAEDDLRQRLALERIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHCT-TEEEEEECHH--HHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESS
T ss_pred CEEEEEEECCCChhHHHHHHHHHHHHHHCC-CcEEEEEECC--CCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCC
Confidence 35444 444422 23 3567777777663 4566666432 2367888887 88999999998765443333 544
Q ss_pred ChhHHHHHHHh
Q 014549 352 NNSRLSEVMEQ 362 (423)
Q Consensus 352 ~~~~l~~fi~~ 362 (423)
. ..+.+.+.+
T Consensus 131 p-~~~~~~i~~ 140 (167)
T 1z6n_A 131 P-QAVLDGGPQ 140 (167)
T ss_dssp C-HHHHHHCHH
T ss_pred C-HHHHHhHHH
Confidence 3 444455554
No 483
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=78.41 E-value=7.7 Score=29.63 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=36.9
Q ss_pred ccceEEEEEccccccHHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 305 AYASFAFVLWREEESSIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 305 ~~~~f~~v~~~~~~~~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+.|..+.+.+.+.++++++|+ .+.|+++ .++. .+ ..+.++.+.|.++|...
T Consensus 42 ~~i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~--~~-~~~g~~~~~l~~~l~~~ 94 (100)
T 1wjk_A 42 DRFILQEVDITLPENSTWYERYK-FDIPVFH--LNGQ--FL-MMHRVNTSKLEKQLRKL 94 (100)
T ss_dssp SSSEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSS--EE-EESSCCHHHHHHHHHSS
T ss_pred hCCeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCE--EE-EecCCCHHHHHHHHHHH
Confidence 34778888766333478999999 8999763 3433 22 34567888999999763
No 484
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=77.37 E-value=6.3 Score=32.63 Aligned_cols=42 Identities=19% Similarity=0.195 Sum_probs=30.8
Q ss_pred HHHhhcCCCCCC---------------eEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 321 IWWNTFEVESAP---------------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 321 ~l~~~f~v~~~P---------------tl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.+++.|++...| +++++...+.....|.|..+.+.|.+.|+.
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 161 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRR 161 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHH
Confidence 578889998766 777775555555556788888888888776
No 485
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=74.60 E-value=6.6 Score=31.33 Aligned_cols=38 Identities=13% Similarity=0.316 Sum_probs=27.6
Q ss_pred HhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 323 WNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 323 ~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
.+.|++...|+++++...+. +. .+..+.+.|.++|++.
T Consensus 102 ~~~~~v~~~P~~~lid~~G~--i~-~~~~~~~~l~~~l~~~ 139 (142)
T 3ewl_A 102 RQLYDIRATPTIYLLDGRKR--VI-LKDTSMEQLIDYLATQ 139 (142)
T ss_dssp TTCSCCCSSSEEEEECTTCB--EE-ECSCCHHHHHHHHHC-
T ss_pred HHHcCCCCCCeEEEECCCCC--EE-ecCCCHHHHHHHHHHH
Confidence 34899999999999954433 23 3567888999998863
No 486
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=74.55 E-value=8.5 Score=31.47 Aligned_cols=34 Identities=6% Similarity=0.098 Sum_probs=25.1
Q ss_pred HHhhcCCCCCCeEEEecCCCcceeEecCCCChhH
Q 014549 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSR 355 (423)
Q Consensus 322 l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~ 355 (423)
+.+.|++...|+++++...+.....+.|..+.+.
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e~ 138 (152)
T 2lrt_A 105 YISLYNVTNLPSVFLVNRNNELSARGENIKDLDE 138 (152)
T ss_dssp HHHHHTCCSCSEEEEEETTTEEEEETTTCSCHHH
T ss_pred HHHHcCcccCceEEEECCCCeEEEecCCHHHHHH
Confidence 8899999999999999655554445567655444
No 487
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=71.25 E-value=4 Score=35.72 Aligned_cols=43 Identities=16% Similarity=0.121 Sum_probs=33.8
Q ss_pred hHHHhhCCCCccccccCccEEEEeCCCCCCCCCcccccCCCCHHHHHHHHHHh
Q 014549 200 THLAERKPIGQIFFRRGLPSLVAFPPGCKSSDCMTRFEGELSVDAVTDWFATA 252 (423)
Q Consensus 200 ~~l~~~~~~~~~~~i~~~Pti~~f~~g~~~~~~~~~y~G~~~~~~l~~fi~~~ 252 (423)
..+++++| |.++||++++.+|+. ...+.|..+.+.+.+++.+.
T Consensus 166 ~~~a~~~g------v~g~Pt~~i~~~G~~----~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 166 FQRVAQWG------ISGFPALVVESGTDR----YLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHHTT------CCSSSEEEEEETTEE----EEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHcC------CcccceEEEEECCEE----EEeccCCCCHHHHHHHHHHH
Confidence 34678888 999999999887743 22467988999999988766
No 488
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=69.76 E-value=6.2 Score=30.48 Aligned_cols=41 Identities=7% Similarity=-0.035 Sum_probs=25.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCC---ChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSF---NNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~---~~~~l~~fi~~~ 363 (423)
..+++.|++.+.|++ |.++ ..-..+.|.. +.+.|.++|++.
T Consensus 63 ~~l~~~~~v~~~Pt~--~~~g-~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV--FIGG-KQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHSCCSSCEE--EETT-EEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHhCCCCcCEE--EECC-EEECChHHHHHHHhCChHHHHHHHc
Confidence 468999999999999 3332 2211223322 556788888774
No 489
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=69.35 E-value=12 Score=30.06 Aligned_cols=49 Identities=8% Similarity=-0.031 Sum_probs=27.7
Q ss_pred EEEEecCCCccccccHHHHHHHHHHhhcc-ceEEEEEcccchhh-hHHHhhC
Q 014549 157 LIQVYSDGSYLCGQFSGAWKTIAALLEGI-ANTGMVELGDIRLA-THLAERK 206 (423)
Q Consensus 157 lV~FYapwC~~C~~~~p~~~~~A~~l~~~-~~~~~Vdc~~~~~~-~~l~~~~ 206 (423)
++.|.+++|+.|+-.. .=..+-..|+.. +.+-.+|.+.++.. ..+.++.
T Consensus 2 V~vYtt~~c~~c~~kk-~c~~aK~lL~~kgV~feEidI~~d~~~r~eM~~~~ 52 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKK-KQQDVLGFLEANKIGFEEKDIAANEENRKWMRENV 52 (121)
T ss_dssp EEEEECTTCSCHHHHH-HHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHS
T ss_pred EEEEecCCCCCccchH-HHHHHHHHHHHCCCceEEEECCCCHHHHHHHHHhc
Confidence 5667899999994221 111222334443 68888998744332 3345555
No 490
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=67.09 E-value=27 Score=30.43 Aligned_cols=69 Identities=10% Similarity=0.194 Sum_probs=44.1
Q ss_pred chHHHHHHHhcccc-ceEEEEEccc---------------------------cccHHHHhhcCCCCCCeEEEecCCCcce
Q 014549 293 SPFVRQISRNYWAY-ASFAFVLWRE---------------------------EESSIWWNTFEVESAPAIVFLKDPGVKP 344 (423)
Q Consensus 293 ~~~~~~~a~~~~~~-~~f~~v~~~~---------------------------~~~~~l~~~f~v~~~Ptl~lfk~~~~~~ 344 (423)
.+.+..+..+|.+. +.+..|...+ .....+++.|++...|+++++...+.
T Consensus 78 ~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~-- 155 (218)
T 3u5r_E 78 REALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERR-- 155 (218)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCB--
T ss_pred HHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCc--
Confidence 45566667777544 6666665421 11356899999999999999954443
Q ss_pred eEecC-----------CCChhHHHHHHHhh
Q 014549 345 VVYYG-----------SFNNSRLSEVMEQN 363 (423)
Q Consensus 345 ~~y~g-----------~~~~~~l~~fi~~~ 363 (423)
+.|.| ..+.+.|.+.|++.
T Consensus 156 i~~~g~~d~~~~~~~~~~~~~~l~~~i~~l 185 (218)
T 3u5r_E 156 LVYHGQFDDARPGNGKDVTGADLRAAVDAV 185 (218)
T ss_dssp EEEEECSSSCCTTSCCCCCCHHHHHHHHHH
T ss_pred EEEeccccccccccccccCHHHHHHHHHHH
Confidence 33433 23467788888773
No 491
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=66.30 E-value=12 Score=32.00 Aligned_cols=44 Identities=5% Similarity=0.042 Sum_probs=31.2
Q ss_pred HHHHhhcCCC-----CCCeEEEecCCCcceeEecCCC----ChhHHHHHHHhh
Q 014549 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~-----~~Ptl~lfk~~~~~~~~y~g~~----~~~~l~~fi~~~ 363 (423)
..+.+.|++. ..|+.+++...+.....+.|.. +.++|.+.|+..
T Consensus 107 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 107 KSISRDYDVLFEEAIALRGAFLIDKNMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp SHHHHHTTCEETTTEECEEEEEEETTTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4688899998 8999999965555444455544 567788887763
No 492
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=66.30 E-value=18 Score=29.96 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=27.0
Q ss_pred hcCCCCCC------eEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 325 TFEVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 325 ~f~v~~~P------tl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
.|++.+.| +.+++...+.....+.|..+.+.|.+.|++
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 165 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEE 165 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 46777788 777775555544556788888888888776
No 493
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=66.26 E-value=17 Score=28.91 Aligned_cols=38 Identities=8% Similarity=0.212 Sum_probs=26.2
Q ss_pred HHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 322 WWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 322 l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
+.+.|++.+.|+++++...+.. .+.+ .+.+.|.+||++
T Consensus 105 ~~~~~~v~~~P~~~lid~~G~i--~~~~-~~~~~l~~~l~e 142 (142)
T 3eur_A 105 NKNLYDLRAIPTLYLLDKNKTV--LLKD-ATLQKVEQYLAE 142 (142)
T ss_dssp HTTCSCCTTCSEEEEECTTCBE--EEEE-ECHHHHHHHHHC
T ss_pred hhhhcCCCcCCeEEEECCCCcE--EecC-CCHHHHHHHHhC
Confidence 5788999999999999654432 2222 246788888753
No 494
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=64.31 E-value=19 Score=30.34 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=30.6
Q ss_pred HHHHhhcCCC------CCCeEEEecCCCcceeEecCCC----ChhHHHHHHHh
Q 014549 320 SIWWNTFEVE------SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~------~~Ptl~lfk~~~~~~~~y~g~~----~~~~l~~fi~~ 362 (423)
..+++.|++. ..|+++++...+.....+.|.. +.+.|.+.|+.
T Consensus 102 ~~~~~~~~v~~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 102 QTISRQFDVLNEETGLADRGTFIIDPDGVIQAIEINADGIGRDASTLINKVKA 154 (187)
T ss_dssp CHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTSCCCTTHHHHHHHH
T ss_pred hHHHHHhCCCcCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4678899998 7999999955554444445543 56778888876
No 495
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=63.77 E-value=8.3 Score=31.85 Aligned_cols=33 Identities=12% Similarity=0.219 Sum_probs=24.3
Q ss_pred CCCCeEEEecCCCcceeEecCCC--ChhHHHHHHHh
Q 014549 329 ESAPAIVFLKDPGVKPVVYYGSF--NNSRLSEVMEQ 362 (423)
Q Consensus 329 ~~~Ptl~lfk~~~~~~~~y~g~~--~~~~l~~fi~~ 362 (423)
...|+++++. .+.....+.|.. +.+.|.+.|++
T Consensus 136 ~~~P~~~lid-~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 136 DHTATTFVVK-EGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp EECCCEEEEE-TTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred ecCCEEEEEE-CCEEEEEECCCCCCCHHHHHHHHHH
Confidence 4579999998 665555566766 77888888875
No 496
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=63.12 E-value=37 Score=28.83 Aligned_cols=43 Identities=9% Similarity=-0.038 Sum_probs=31.0
Q ss_pred HHHHhhcCCC-----CCCeEEEecCCCcceeEecCCC----ChhHHHHHHHh
Q 014549 320 SIWWNTFEVE-----SAPAIVFLKDPGVKPVVYYGSF----NNSRLSEVMEQ 362 (423)
Q Consensus 320 ~~l~~~f~v~-----~~Ptl~lfk~~~~~~~~y~g~~----~~~~l~~fi~~ 362 (423)
..+.+.|++. ..|+++++...+.....+.|.. +.+.|.+.|+.
T Consensus 116 ~~~~~~~~v~~~~g~~~P~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 167 (195)
T 2bmx_A 116 RELSQAAGVLNADGVADRVTFIVDPNNEIQFVSATAGSVGRNVDEVLRVLDA 167 (195)
T ss_dssp SHHHHHHTCBCTTSSBCEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred hHHHHHhCCcccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4678889998 8999999965555444444543 56778888876
No 497
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=60.67 E-value=49 Score=26.89 Aligned_cols=32 Identities=9% Similarity=0.211 Sum_probs=23.9
Q ss_pred HHHHhhcCCCC----CCeEEEecCCCcceeEecCCC
Q 014549 320 SIWWNTFEVES----APAIVFLKDPGVKPVVYYGSF 351 (423)
Q Consensus 320 ~~l~~~f~v~~----~Ptl~lfk~~~~~~~~y~g~~ 351 (423)
..+.+.|++.+ .|+.+++...+.....+.|..
T Consensus 96 ~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 96 KKIRELYGAKGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp SHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred HHHHHHcCCCCcCcccceEEEECCCCEEEEEEecCC
Confidence 56889999988 999999966555545566743
No 498
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=57.89 E-value=11 Score=31.13 Aligned_cols=39 Identities=21% Similarity=0.349 Sum_probs=31.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCCcceeEecCCCChhHHHHHHHhh
Q 014549 320 SIWWNTFEVESAPAIVFLKDPGVKPVVYYGSFNNSRLSEVMEQN 363 (423)
Q Consensus 320 ~~l~~~f~v~~~Ptl~lfk~~~~~~~~y~g~~~~~~l~~fi~~~ 363 (423)
..+++++||++.||+++ .++. .+.|..+.+.|.++|++.
T Consensus 99 ~~la~~~gI~gtPt~vi-~nG~----~i~G~~~~~~l~~~i~~~ 137 (147)
T 3gv1_A 99 TSLGEQFGFNGTPTLVF-PNGR----TQSGYSPMPQLEEIIRKN 137 (147)
T ss_dssp HHHHHHTTCCSSCEEEC-TTSC----EEESCCCTTHHHHHHHHT
T ss_pred HHHHHHhCCCccCEEEE-ECCE----EeeCCCCHHHHHHHHHHH
Confidence 56899999999999988 4332 347888899999999874
No 499
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=57.28 E-value=6.3 Score=40.57 Aligned_cols=65 Identities=14% Similarity=0.224 Sum_probs=39.2
Q ss_pred cccccCCCCcEEEEEecCCCccccccHHHHHHHHHHhhccceEEEEEcccc---hh-hhHHHhhCCCCccccccCccEEE
Q 014549 146 FPSIFHDSKPWLIQVYSDGSYLCGQFSGAWKTIAALLEGIANTGMVELGDI---RL-ATHLAERKPIGQIFFRRGLPSLV 221 (423)
Q Consensus 146 f~~~v~~~~~~lV~FYapwC~~C~~~~p~~~~~A~~l~~~~~~~~Vdc~~~---~~-~~~l~~~~~~~~~~~i~~~Pti~ 221 (423)
+++++...+ ++.|..+||++|++....+++. .+.+-.+|.+.+ .. ...+.+..+ ...+|.+
T Consensus 11 v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~------~i~~~~~dv~~~~~~~~~~~~l~~~~g------~~tvP~v- 75 (598)
T 2x8g_A 11 LRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA------KIKHATIELDQLSNGSAIQKCLASFSK------IETVPQM- 75 (598)
T ss_dssp HHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT------TCCCEEEEGGGSTTHHHHHHHTHHHHS------CCCSCEE-
T ss_pred HHHHhccCC--EEEEECCCChhHHHHHHHHHHC------CCCcEEEEcccCcchHHHHHHHHHHhC------CceeCEE-
Confidence 344454443 5778999999999888776643 234556776632 11 122333345 6789987
Q ss_pred EeCCC
Q 014549 222 AFPPG 226 (423)
Q Consensus 222 ~f~~g 226 (423)
|.+|
T Consensus 76 -~i~g 79 (598)
T 2x8g_A 76 -FVRG 79 (598)
T ss_dssp -EETT
T ss_pred -EECC
Confidence 4455
No 500
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=54.94 E-value=27 Score=29.58 Aligned_cols=36 Identities=6% Similarity=0.068 Sum_probs=24.4
Q ss_pred CCCCCC------eEEEecCCCcceeEecCCCChhHHHHHHHh
Q 014549 327 EVESAP------AIVFLKDPGVKPVVYYGSFNNSRLSEVMEQ 362 (423)
Q Consensus 327 ~v~~~P------tl~lfk~~~~~~~~y~g~~~~~~l~~fi~~ 362 (423)
++.+.| +.+++...+.....+.|..+.+.|.+.|++
T Consensus 141 ~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 182 (190)
T 2vup_A 141 GILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIP 182 (190)
T ss_dssp CGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHH
T ss_pred CcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHH
Confidence 555677 667765445444456788888888888776
Done!