Query 014554
Match_columns 422
No_of_seqs 164 out of 1211
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:41:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014554.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014554hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jgp_A Tyrocidine synthetase 3 99.9 6.6E-22 2.3E-26 202.3 36.5 369 5-419 95-485 (520)
2 1l5a_A Amide synthase, VIBH; n 99.9 6.3E-22 2.2E-26 197.7 34.4 355 9-419 1-383 (436)
3 1q9j_A PAPA5, polyketide synth 99.9 6.3E-23 2.2E-27 203.9 24.8 360 4-419 5-396 (422)
4 4hvm_A Tlmii; PSI-biology, mid 99.9 3.2E-22 1.1E-26 203.3 24.7 376 4-419 11-437 (493)
5 2vsq_A Surfactin synthetase su 99.9 4.7E-21 1.6E-25 215.7 23.2 364 6-419 12-407 (1304)
6 2xhg_A Tyrocidine synthetase A 99.9 2.7E-19 9.3E-24 180.1 28.6 294 6-329 17-337 (466)
7 3fot_A 15-O-acetyltransferase; 99.6 2.5E-13 8.7E-18 137.4 30.8 386 7-420 31-497 (519)
8 2bgh_A Vinorine synthase; VS, 98.2 0.00015 5.2E-09 71.5 22.0 266 6-326 25-322 (421)
9 2xr7_A Malonyltransferase; xen 98.2 0.00018 6.2E-09 71.6 21.2 287 7-327 22-354 (453)
10 4g22_A Hydroxycinnamoyl-COA sh 98.2 9.2E-05 3.1E-09 73.5 18.5 260 6-307 26-317 (439)
11 2e1v_A Acyl transferase; BAHD 97.8 0.021 7.1E-07 56.6 27.3 276 7-328 27-353 (454)
12 2rkv_A Trichothecene 3-O-acety 97.5 0.0093 3.2E-07 59.0 21.1 268 7-307 5-319 (451)
13 3rqc_A Probable lipoamide acyl 89.3 5.1 0.00018 35.2 12.2 62 212-273 32-102 (224)
14 1dpb_A Dihydrolipoyl-transacet 86.2 9.4 0.00032 33.9 12.1 39 213-252 42-89 (243)
15 1scz_A E2, dihydrolipoamide su 85.3 8 0.00027 34.1 11.1 39 213-252 31-79 (233)
16 3mae_A 2-oxoisovalerate dehydr 74.5 21 0.00073 31.9 10.2 39 213-252 45-93 (256)
17 3b8k_A PDCE2;, dihydrolipoylly 66.3 32 0.0011 30.3 9.4 59 214-273 40-109 (239)
18 1p94_A Plasmid partition prote 64.6 8.1 0.00028 27.6 4.1 30 220-254 46-75 (76)
19 2i9d_A Chloramphenicol acetylt 60.6 62 0.0021 27.9 10.0 61 212-273 30-95 (217)
20 3qoq_A Alginate and motility r 57.4 14 0.00049 25.7 4.2 28 220-248 31-58 (69)
21 1baz_A ARC repressor; transcri 56.0 17 0.00057 23.8 4.2 27 220-247 19-45 (53)
22 1nla_A Transcriptional repress 49.6 24 0.00083 24.1 4.3 29 221-250 20-48 (64)
23 3cla_A Type III chloramphenico 46.3 9 0.00031 33.3 2.2 25 119-143 182-206 (213)
24 2i9d_A Chloramphenicol acetylt 44.5 10 0.00034 33.1 2.2 23 119-141 190-212 (217)
25 1q23_A Chloramphenicol acetylt 43.6 11 0.00036 33.0 2.2 25 119-143 186-210 (219)
26 3rqc_A Probable lipoamide acyl 40.5 12 0.0004 32.9 1.9 31 119-149 188-218 (224)
27 1q23_A Chloramphenicol acetylt 39.9 23 0.00078 30.8 3.7 61 212-273 33-97 (219)
28 3cla_A Type III chloramphenico 36.9 30 0.001 29.9 4.0 61 212-273 28-92 (213)
29 2k9i_A Plasmid PRN1, complete 35.8 55 0.0019 20.8 4.4 32 219-255 20-51 (55)
30 1scz_A E2, dihydrolipoamide su 34.3 12 0.00041 33.0 1.0 25 119-143 197-221 (233)
31 1dpb_A Dihydrolipoyl-transacet 33.5 19 0.00064 31.9 2.2 25 119-143 209-233 (243)
32 3b8k_A PDCE2;, dihydrolipoylly 33.3 16 0.00056 32.2 1.7 25 119-143 205-229 (239)
33 2an7_A Protein PARD; bacterial 32.5 30 0.001 24.7 2.6 22 221-243 14-35 (83)
34 2ii3_A Lipoamide acyltransfera 30.3 23 0.00077 31.8 2.2 25 119-143 225-249 (262)
35 2kel_A SVTR protein, uncharact 28.1 86 0.0029 20.6 4.2 29 221-254 26-54 (56)
36 1u9p_A PARC; unknown function; 27.1 71 0.0024 24.8 4.1 27 220-247 30-56 (120)
37 1y9b_A Conserved hypothetical 26.6 1E+02 0.0035 22.5 4.8 34 220-254 17-51 (90)
38 2bsq_E FITA, trafficking prote 25.7 91 0.0031 22.1 4.2 28 220-248 13-40 (77)
39 1f8v_D Mature capsid protein g 25.2 14 0.00047 22.3 -0.2 14 366-379 16-29 (40)
40 3mae_A 2-oxoisovalerate dehydr 25.0 24 0.00081 31.6 1.3 31 119-149 211-241 (256)
41 2hue_C Histone H4; mini beta s 21.0 85 0.0029 22.5 3.4 36 217-253 10-46 (84)
42 3l60_A Branched-chain alpha-ke 20.1 47 0.0016 29.5 2.2 22 120-141 207-228 (250)
43 3hva_A Protein FIMX; ggdef dig 20.0 3.2E+02 0.011 21.4 9.3 115 212-333 44-168 (177)
No 1
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.92 E-value=6.6e-22 Score=202.33 Aligned_cols=369 Identities=12% Similarity=0.078 Sum_probs=230.2
Q ss_pred CCCCCCcchhccc-----CCCCceE-EEEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEe-cccCcc
Q 014554 5 PDEPLTPAGRLFL-----QPHMNTI-IHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (422)
Q Consensus 5 ~~~~Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~-~~~d~~ 77 (422)
...|||+.|+.+| .+....+ +...++++|++|.+.|++++...+. +||.||+++... .|.++++. ++.++.
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~ 172 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIA-RHESLRTSFAVV-NGEPVQNIHEDVPFA 172 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEEEE-TTEEEEEECSCCCCC
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHH-HhHhheeEEEee-CCEEEEEECCCCCCc
Confidence 3569999997543 3333222 2356888999999999999999999 999999999874 57788776 544443
Q ss_pred Ccee-eeCChhHHHHHHHhhhcCCCCCCC-CCceEEEEE---cCceEEEEeecccccccccHHHHHHHhcccCCCCCCCC
Q 014554 78 RHFV-EVHDSTSVNDYVAGLSFSSPLSED-KPLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAGCRLADDPEALP 152 (422)
Q Consensus 78 ~hv~-~~~~~~~l~~~~~~~~~~~pld~~-~PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~~p~~~p 152 (422)
..+. + +++++++ +.+.. .+|||.+ .|+|++.++ ++++.+++.+||+++||+|+..++.++...|... ..+
T Consensus 173 ~~~~~~--~~~~~~~-~~~~~-~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~-~l~ 247 (520)
T 2jgp_A 173 LAYSEV--TEEEARE-LVSSL-VQPFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGD-VLP 247 (520)
T ss_dssp CEEEEC--CHHHHHH-HHHHT-CCCCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTC-CCC
T ss_pred eEEEeC--CHHHHHH-HHHHh-cCCCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccC-CCC
Confidence 3222 2 4566666 66777 8999987 599999999 5678999999999999999999999998876432 111
Q ss_pred CCCCCCCCCCCCccccHHHHHHHHHH--HHHHHHHHHHHhcccCCCCCccc--CCCCCC-CCCeEEEEEeec---hHHHH
Q 014554 153 AVAGGKRTESAGKIGSLWGLLKMVLL--SIVFVLEFLLRALWVSDRKTAIS--GGAGVE-LWPRKLATATFS---IDDMK 224 (422)
Q Consensus 153 ~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~-~~~r~~~~~~~~---l~~vk 224 (422)
..+.+.. ......+.... .......+....+....+..++. .+.+.. ..........++ .+.++
T Consensus 248 ~~~~~~~--------d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 319 (520)
T 2jgp_A 248 ELRIQYK--------DFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLH 319 (520)
T ss_dssp CCSCCHH--------HHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHH
T ss_pred CCCCCHH--------HHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHH
Confidence 1111000 00000000000 00000111111111111212221 111110 001122233344 56799
Q ss_pred HHHHHcCCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCCCCceEEEEEee
Q 014554 225 AVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLLP 304 (422)
Q Consensus 225 ~ia~~~~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~~~ 304 (422)
++|+++ |+|++++++||++.+|++|.++ .++.+++|++.|...+. ....|+.+..+.+.
T Consensus 320 ~~a~~~-~~T~~~~l~aa~a~~L~~~~~~---------~dv~~g~~~~gR~~~~~-----------~~~vG~f~n~lplr 378 (520)
T 2jgp_A 320 QLAQAT-GTTLYMVLLAAYNVLLAKYAGQ---------EDIIVGTPITGRSHADL-----------EPIVGMFVNTLAMR 378 (520)
T ss_dssp HHHHHH-TCCHHHHHHHHHHHHHHHHHTC---------SCEEEEEEECCCCSGGG-----------TTCCSCCCEEEEEE
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCeEEEeccCCCCchhh-----------hccEEeeeeeeeEE
Confidence 999999 9999999999999999999764 37999999999976432 24789999998888
Q ss_pred eeccCCCCCHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCccceeecCce
Q 014554 305 IYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKITLADNP 384 (422)
Q Consensus 305 Lp~~~~~~dp~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SNvpGp~~~~~~~G~~ 384 (422)
+.. ....++.+.|+++++.+..........+. .+.. .+... ....+...++ .+|+..+++.....+.|..
T Consensus 379 ~~~-~~~~~~~~~l~~v~~~~~~~~~h~~~p~~-~i~~----~l~~~--r~~~~~~lf~--~~~~~~~~~~~~~~~~~~~ 448 (520)
T 2jgp_A 379 NKP-QREKTFSEFLQEVKQNALDAYGHQDYPFE-ELVE----KLAIA--RDLSRNPLFD--TVFTFQNSTEEVMTLPECT 448 (520)
T ss_dssp ECC-CTTSBHHHHHHHHHHHHHHHHHTCCSCHH-HHHH----HTCCC--CCTTSCSSCS--EEEEEECCCCSCCCCSSEE
T ss_pred ecC-CCCCCHHHHHHHHHHHHHHHHHhccCCHH-HHHH----HhcCC--CCCCCCCcEE--EEEEEecCCCccccCCCce
Confidence 877 23356889999999998877654321111 1111 11100 0011122333 4444444444556677877
Q ss_pred eeeeeeccC--CCCceeEEEEEeeCCeEEEEEeccCC
Q 014554 385 VAYLRANTS--SLPHLIKGRYLGFIKRVNHSLAPPWT 419 (422)
Q Consensus 385 v~~~~~~~~--~~~~~l~v~~~Sy~~~l~~~i~~D~~ 419 (422)
++....... .....+.+.+..++|.+.+.+.+|..
T Consensus 449 ~~~~~~~~~~~~~~~~L~l~~~~~~~~l~~~~~y~~~ 485 (520)
T 2jgp_A 449 LAPFMTDETGQHAKFDLTFSATEEREEMTIGVEYSTS 485 (520)
T ss_dssp EEECSSCSSCSBCSSSEEEEEEECSSCEEEEEEEETT
T ss_pred eEEeecCCCCcceeeeeEEEEEECCCeEEEEEEEChh
Confidence 665422112 34456889999999999999988864
No 2
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=99.92 E-value=6.3e-22 Score=197.73 Aligned_cols=355 Identities=13% Similarity=-0.012 Sum_probs=221.8
Q ss_pred CCcchhccc-----CCCCceE-EEEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEecccCccCcee-
Q 014554 9 LTPAGRLFL-----QPHMNTI-IHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRETSVDIDRHFV- 81 (422)
Q Consensus 9 Ls~~d~~~~-----~~~~~~~-~~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~~~~d~~~hv~- 81 (422)
||+.|+.+| ++....+ +...++++|++|.+.|++++...+. +||.||+++... .| ++.+..++..++.
T Consensus 1 Ls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~---~v~~~~~~~~~~~d 75 (436)
T 1l5a_A 1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVS-EIDLFRARFSAQ-GE---LYWHPFSPPIDYQD 75 (436)
T ss_dssp CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHH-TCGGGGEEECTT-CC---EEECSSCCCCEEEE
T ss_pred CCHHHHHHHHHHHcCCCCCccceeEEEEEeCCCCHHHHHHHHHHHHH-HhheeEEEEEec-CC---eECCCcCCCccEEe
Confidence 678887544 3444433 3467899999999999999999999 999999999864 34 4443333333332
Q ss_pred eeC---ChhHHHHHHHhhhcCCCCCCCC-CceEEEEE---cCceEEEEeecccccccccHHHHHHHhcccCCC---CCCC
Q 014554 82 EVH---DSTSVNDYVAGLSFSSPLSEDK-PLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAGCRLADD---PEAL 151 (422)
Q Consensus 82 ~~~---~~~~l~~~~~~~~~~~pld~~~-PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~~---p~~~ 151 (422)
+.. .++++.+++.+.. .+|||.++ |+|++.++ ++++.+++.+||+++||+|+..++.++...|.. ....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~ 154 (436)
T 1l5a_A 76 LSIHLEAEPLAWRQIEQDL-QRSSTLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTP 154 (436)
T ss_dssp CTTCTTHHHHHHHHHHHHH-TSCCCCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCCCHHHHHHHHHHHHh-cCCCCcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCC
Confidence 222 2456888899999 99999975 99999999 567899999999999999999999998876531 1111
Q ss_pred CCCCCCCCCCCCCcc-------ccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeec---hH
Q 014554 152 PAVAGGKRTESAGKI-------GSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFS---ID 221 (422)
Q Consensus 152 p~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~---l~ 221 (422)
+ .+. ..-.+... .......+.+|... +....+...+..+..............++ .+
T Consensus 155 ~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~W~~~----------l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~ 221 (436)
T 1l5a_A 155 T-AAF--KPYQSYLEEEAAYLTSHRYWQDKQFWQGY----------LREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNH 221 (436)
T ss_dssp C-CCC--CCHHHHHHHHHHHHTSHHHHHHHHHHHHH----------HHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHH
T ss_pred C-CCc--cCHHHHHHHHHHhhccHhHHHHHHHHHHH----------hcCCCCcccCCCCCCCCcccceeeEEecCHHHHH
Confidence 1 111 10000000 00001112233221 10111112222111100001112233344 56
Q ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCCCCceEEEE
Q 014554 222 DMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGML 301 (422)
Q Consensus 222 ~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~s~~ 301 (422)
.++++|+++ |+|++++++||++.+|++|.+ . .+.+++|++.|...+.. ...|+.+..+
T Consensus 222 ~l~~~a~~~-~~t~~~~l~aa~~~~L~~~~g-~---------dv~ig~~~~~R~~~~~~-----------~~vG~f~n~l 279 (436)
T 1l5a_A 222 LLLKLANAN-QIGWPDALVALCALYLESAEP-D---------APWLWLPFMNRWGSVAA-----------NVPGLMVNSL 279 (436)
T ss_dssp HHHHHHHHT-TCCHHHHHHHHHHHHHHHHST-T---------CCEEEEEECCCTTSGGG-----------GSCSCCCEEE
T ss_pred HHHHHHHHh-CCCHHHHHHHHHHHHHHHhhC-C---------ceEEeeecccCCChHHh-----------cCcceEEEEE
Confidence 789999999 999999999999999999965 2 68999999999764322 4689999998
Q ss_pred EeeeeccCCCCCHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCccceeec
Q 014554 302 LLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPTEKITLA 381 (422)
Q Consensus 302 ~~~Lp~~~~~~dp~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SNvpGp~~~~~~~ 381 (422)
.+.+.. ....++.+.++++++++............. +.. .+... .-....++..+++-|.+.+ .++
T Consensus 280 plr~~~-~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~-i~~----~l~~~----~~~~~lf~~~~~~~~~~~~----~~~ 345 (436)
T 1l5a_A 280 PLLRLS-AQQTSLGNYLKQSGQAIRSLYLHGRYRIEQ-IEQ----DQGLN----AEQSYFMSPFINILPFESP----HFA 345 (436)
T ss_dssp EEECCC-CTTCBHHHHHHHHHHHHHHHHHTTTSCHHH-HHH----HTTCC----TTCCBCCCSEEEEECCCCC----CCT
T ss_pred EEEEec-CCCCCHHHHHHHHHHHHHHHhhhcCCCHHH-HHH----Hhccc----ccCCCccceEEEeeccCcc----ccC
Confidence 888877 233568899999999988876643321111 111 11100 0012223333444444332 678
Q ss_pred CceeeeeeeccCCCCceeEEEEE-eeCCeEEEEEeccCC
Q 014554 382 DNPVAYLRANTSSLPHLIKGRYL-GFIKRVNHSLAPPWT 419 (422)
Q Consensus 382 G~~v~~~~~~~~~~~~~l~v~~~-Sy~~~l~~~i~~D~~ 419 (422)
|..++.......... .+.+.+. .++|.+.+.+.+|..
T Consensus 346 ~~~~~~~~~~~~~~~-~l~l~v~~~~~~~l~~~~~y~~~ 383 (436)
T 1l5a_A 346 DCQTELKVLASGSAE-GINFTFRGSPQHELCLDITADLA 383 (436)
T ss_dssp TCEEEEEEEEECCCC-SEEEEEEECTTSCEEEEEEEETT
T ss_pred CCeeEEEecCCCCcc-ceEEEEEecCCCcEEEEEEeChh
Confidence 888776543321122 7888888 689999999988865
No 3
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.91 E-value=6.3e-23 Score=203.94 Aligned_cols=360 Identities=11% Similarity=0.010 Sum_probs=216.8
Q ss_pred CCCCCCCcchhcccCCCCceEEEEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEe-cccCccCceee
Q 014554 4 HPDEPLTPAGRLFLQPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDRHFVE 82 (422)
Q Consensus 4 ~~~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~-~~~d~~~hv~~ 82 (422)
+...|||+.|+.|+... ..+...++++|++|.+.|++++...+. +||.||++++.. .+.++.+. +..+.. ++.+
T Consensus 5 ~~~~pls~~Q~~~~~~~--y~~~~~~~l~g~ld~~~l~~A~~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~-~~~~ 79 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYE--VFTSMTIQLRGVIDVDALSDAFDALLE-THPVLASHLEQS-SDGGWNLVADDLLHS-GICV 79 (422)
T ss_dssp SEEEECCHHHHHHHHTT--CEEEEEEEEESCCCHHHHHHHHHHHHH-HCGGGSEEEEEC-TTSSEEEEECCSSSC-CCEE
T ss_pred ceeecCCHHHHHHHhcC--ceEEEEEEEecCCCHHHHHHHHHHHHH-hCccceEEEEec-CCcceeeeccCCCCC-ceEE
Confidence 44689999998877433 334567889999999999999999999 999999999875 44553333 433333 1221
Q ss_pred eC--ChhHHHHHHHhhhcCCCCCCCCCceEEEEE--cCceEEEEeecccccccccHHHHHHHhcccCC------CCCCCC
Q 014554 83 VH--DSTSVNDYVAGLSFSSPLSEDKPLWEVHVL--AEHRCAVFRIHHALGDGISLVSMLLAGCRLAD------DPEALP 152 (422)
Q Consensus 83 ~~--~~~~l~~~~~~~~~~~pld~~~PlW~~~li--~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~------~p~~~p 152 (422)
.+ ...+.+. +.+ . ..|||...|+|++.++ ++++.+++.+||+++||+|+..++.++...|. .+...+
T Consensus 80 ~d~~~~~~~~~-~~~-~-~~~~d~~~pl~r~~l~~~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~ 156 (422)
T 1q9j_A 80 IDGTAATNGSP-SGN-A-ELRLDQSVSLLHLQLILREGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPIT 156 (422)
T ss_dssp EC--------------C-CCCCCTTTCSEEEEEECCSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCC
T ss_pred EECCCCCcchh-hhc-c-cCccCCCCCcEEEEEEecCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCC
Confidence 11 1111111 112 4 6899945699999999 57789999999999999999999999877552 111111
Q ss_pred CCCCCCCCCCCCccccHHHH-----------------HHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCC--CCCCeEE
Q 014554 153 AVAGGKRTESAGKIGSLWGL-----------------LKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGV--ELWPRKL 213 (422)
Q Consensus 153 ~~p~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~--~~~~r~~ 213 (422)
. .+... ..... .+.+|..... . ....|...+.+. ......+
T Consensus 157 ~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~------~-----~~~lp~~~~~~~~~~~~~~~~ 216 (422)
T 1q9j_A 157 P--QPTPL-------SMEAVLAQRGIRKQGLSGAERFMSVMYAYEIP------A-----TETPAVLAHPGLPQAVPVTRL 216 (422)
T ss_dssp C--CCCCB-------CHHHHHHHSSCCC-----CTTSSTTTTCC------------------------CCSBCCCCEEEE
T ss_pred C--CCCCC-------CHHHHHHhcCCcccccchhhhhhhhhhcccCC------C-----cccCCCCCCCCCCCCccceEE
Confidence 1 11110 00000 0111111000 0 000111111000 0001122
Q ss_pred EEEeechHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCC
Q 014554 214 ATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTR 293 (422)
Q Consensus 214 ~~~~~~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~ 293 (422)
....-..+.++++|+++ |+|+|++++||++.+|++|. ..+ ...+.+++|++.|...... .+...
T Consensus 217 ~l~~~~~~~l~~~a~~~-~~t~~~~l~aa~~~~l~r~~-~~~------~~~v~~g~~~~~R~~~~~~--------~~~~~ 280 (422)
T 1q9j_A 217 WLSKQQTSDLMAFGREH-RLSLNAVVAAAILLTEWQLR-NTP------HVPIPYVYPVDLRFVLAPP--------VAPTE 280 (422)
T ss_dssp CCCHHHHHHHHHHHTTT-TCCHHHHHHHHHHHHHHHHH-TCS------SCCEEEEEEEETTTTSSSC--------CCTTT
T ss_pred EeCHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcc-cCC------CceEEEeeeeecccccCCC--------CChhh
Confidence 22222356789999999 99999999999999999982 112 1479999999999753100 00024
Q ss_pred CCceEEEEEeeeeccCCCCCHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCC
Q 014554 294 WGNKFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVG 373 (422)
Q Consensus 294 ~gN~~s~~~~~Lp~~~~~~dp~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SNvpG 373 (422)
..|.++.+...+|+ ....++.+.++++++++..............-+..+...+. ..... .++++|+++
T Consensus 281 ~~~~vG~f~n~lp~-~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~l~~~~i~~~~~-------~~~pl---~~~~~n~~~ 349 (422)
T 1q9j_A 281 ATNLLGAASYLAEI-GPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTP-------PGLPP---LVFCTDATS 349 (422)
T ss_dssp BSCCEEEEEEEECC-CSSCCHHHHHHHHHHHHHHHHHHTHHHHSCCBGGGGGGCCC-------SSSCC---CEEEECCCC
T ss_pred hhhhheeeeeeeec-cCCCCHHHHHHHHHHHHHHHHhcCeeeecccchHHHhcccC-------CCCCc---eEEEecCCc
Confidence 67888888888888 23357889999999998876553321100000000000000 01111 578999988
Q ss_pred CccceeecCceeeeeeeccC-CCCceeEEE-EEeeCCeEEEEEeccCC
Q 014554 374 PTEKITLADNPVAYLRANTS-SLPHLIKGR-YLGFIKRVNHSLAPPWT 419 (422)
Q Consensus 374 p~~~~~~~G~~v~~~~~~~~-~~~~~l~v~-~~Sy~~~l~~~i~~D~~ 419 (422)
......++|..++.+..... .....+.+. +.+++|.+.+.+ +|..
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-y~~~ 396 (422)
T 1q9j_A 350 FPTMRTPPGLEIEDIKGQFYCSISVPLDLYSCAVYAGQLIIEH-HGHI 396 (422)
T ss_dssp CCSCCCCTTCEEEEEEEEECCBSSCCCCEEEEEEETTEEEEEE-ESSC
T ss_pred CCCCCCCCCceeEeeecccccCCCCCceEEEEEeeCCeEEEEE-ecCc
Confidence 76667788988888765322 334456666 788999999999 8764
No 4
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=99.90 E-value=3.2e-22 Score=203.34 Aligned_cols=376 Identities=11% Similarity=-0.027 Sum_probs=214.7
Q ss_pred CCCCCCCcchhccc-----CCCCceEEEEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEe-cccCcc
Q 014554 4 HPDEPLTPAGRLFL-----QPHMNTIIHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDID 77 (422)
Q Consensus 4 ~~~~~Ls~~d~~~~-----~~~~~~~~~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~-~~~d~~ 77 (422)
+...|||+.|+.+| ++.....+...++++|++|.+.|++++...+. +||.||++++.. .|.|+ +. +.. +.
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~A~~~lv~-rh~~LRt~f~~~-~~~~~-~v~~~~-~~ 86 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGRIDDDRLAAAADEVLD-AFPLLRVNFVDD-DGLWM-RTRENA-DA 86 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESSCCHHHHHHHHHHHHH-HCGGGGEEEEES-SSEEE-EECSCC-CC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCCCCHHHHHHHHHHHHH-hchhceeEEEcc-CCEEE-EecCCC-CC
Confidence 34579999997644 34444334567899999999999999999999 999999999884 57777 54 443 33
Q ss_pred Ccee-eeC---ChhHHHHHHHhhhcCCCCCCCC-CceEEEEE---cCceEEEEeecccccccccHHHHHHHhcccCCCCC
Q 014554 78 RHFV-EVH---DSTSVNDYVAGLSFSSPLSEDK-PLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (422)
Q Consensus 78 ~hv~-~~~---~~~~l~~~~~~~~~~~pld~~~-PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~~p~ 149 (422)
..+. +.. .++++.+++.+.. .+|||.++ |+|++.++ ++++.+++.+||+++||+|+..++.++...|.. .
T Consensus 87 ~~~~d~~~~~~~~~~~~~~~~~~~-~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g-~ 164 (493)
T 4hvm_A 87 LVRSDLRGHPDPQARCVELLRADR-DRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYG-R 164 (493)
T ss_dssp EEEEECTTSSSHHHHHHHHHHHHH-SSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTT-C
T ss_pred ceEEECCCCCchHHHHHHHHHHHh-cCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCC-C
Confidence 3322 222 2278889999999 99999886 99999999 567899999999999999999999999887622 1
Q ss_pred CCCCCCCCCCCCCC------CccccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeechHHH
Q 014554 150 ALPAVAGGKRTESA------GKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSIDDM 223 (422)
Q Consensus 150 ~~p~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~l~~v 223 (422)
..+ .+...-.. ..........+.+|.... . ...+......+... .....+....-..+.+
T Consensus 165 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l------~----~~~~l~~~~~~~~~-~~~~~~~l~~~~~~~l 230 (493)
T 4hvm_A 165 FRP---AQYRDFAEVADFHPLDRETVRVARHRWWSRRL------P----ALPVRGGDGGPVGP-PETSRLRVPGSRWQAL 230 (493)
T ss_dssp CCG---GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHG------G----GSCCCC-------C-CEEEEEEEEHHHHHHH
T ss_pred CCC---cCHHHHHHHHhhhhcccChhhHHHHHHHHHhc------c----CCCCCCCCCCCCCC-CeeEEEEcCHHHHHHH
Confidence 111 00110000 000011112234443221 0 11110001111110 0011222333335668
Q ss_pred HHHHHHcCCCc--hhHHHHHHHHHHHHHHHhh----hCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCCCCce
Q 014554 224 KAVKKAIAGAT--INDVLFGVVSSGLSRYLDH----RSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNK 297 (422)
Q Consensus 224 k~ia~~~~g~T--vNdvllaa~a~al~~~~~~----~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~ 297 (422)
+++|+++ |+| ++++++||++.+|++|... .+.. .....+.+++|++.|...+. ....|+.
T Consensus 231 ~~~a~~~-~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~--~g~~dv~~g~~~~gR~~~~~-----------~~~vG~f 296 (493)
T 4hvm_A 231 TEPGGPL-GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTG--TGKDSLYLSTEVDLRDHLQL-----------GSVVGPL 296 (493)
T ss_dssp HCC-------CHHHHHHHHHHHHHHHC------------------CEEEEEEEEEHHHHTTC-----------CSBCSCC
T ss_pred HHHHHHc-CCCchHHHHHHHHHHHHHHHhhhcccccccCc--CCCCCEEEEeeccCCCCcch-----------hcCeEee
Confidence 8899999 999 9999999999999999110 0000 00138999999999975432 2578999
Q ss_pred EEEEEeeeeccCC--CCCHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccC---
Q 014554 298 FGMLLLPIYYHKG--GADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIV--- 372 (422)
Q Consensus 298 ~s~~~~~Lp~~~~--~~dp~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SNvp--- 372 (422)
+..+.+.+.. .. ..++.+.|+++++.+...... ..... .+..+. ..+... ........+++.+++-|.+
T Consensus 297 ~n~lplr~~~-~~~~~~t~~~~l~~v~~~~~~~~~h-~~p~~-~i~~~~-~~l~~~--~~~~~~~lf~~~~~~~~~~~~~ 370 (493)
T 4hvm_A 297 TDRVVFGVDL-TGLREPSFRDLMSRTQAGFLDAVVH-YLPYH-DVVDLA-VDLGVV--TPPRVAARWDVAVHLCRNAPSS 370 (493)
T ss_dssp EEEEEEEEEC-TTCSSCBHHHHHHHHHHHHHHHHHT-CCCHH-HHHHHH-HHTTSC--BTTBTTGGGCEEECC-------
T ss_pred eceeEEEEec-CCCcCCCHHHHHHHHHHHHHHHHhh-cCCHH-HHHHHH-hhhCcc--cCCCCCcceeEEEEEEecCCcc
Confidence 9999888887 23 467889999999998888775 32222 122210 011100 0000111222223333332
Q ss_pred ---CCccceeecCceeeeeee---c--------------cCCCCceeEEEEEeeCCeEEEEEeccCC
Q 014554 373 ---GPTEKITLADNPVAYLRA---N--------------TSSLPHLIKGRYLGFIKRVNHSLAPPWT 419 (422)
Q Consensus 373 ---Gp~~~~~~~G~~v~~~~~---~--------------~~~~~~~l~v~~~Sy~~~l~~~i~~D~~ 419 (422)
+....+...|..++.+.. + ....+..+.+.+..++|.+.+.+.+|..
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~l~v~~~~~~l~~~~~y~~~ 437 (493)
T 4hvm_A 371 SLTRGERTLAELGVSIELFREADLIGGDTRSATDTWDGTDTWDGTTTDLSVGELGEDMVIVLDQRRT 437 (493)
T ss_dssp -------------CEEEECSHHHHCC-------CCTTCCCCCCCCCEEEEEEEETTEEEEEEEECC-
T ss_pred ccccccccccCCCceeeeccccccccccccccccccccccccCCcceEEEEEEeCCeEEEEEEEccc
Confidence 233344566666665432 0 0123334889999999999999998865
No 5
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.87 E-value=4.7e-21 Score=215.73 Aligned_cols=364 Identities=12% Similarity=-0.001 Sum_probs=224.1
Q ss_pred CCCCCcchhccc-----CCCCceEE-EEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEe-cccCccC
Q 014554 6 DEPLTPAGRLFL-----QPHMNTII-HCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDR 78 (422)
Q Consensus 6 ~~~Ls~~d~~~~-----~~~~~~~~-~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~-~~~d~~~ 78 (422)
..|||+.|+.+| ++....++ ...++++|++|.+.|+++++..+. +||.||+++.....+.|+++. ++.+++.
T Consensus 12 ~~PLS~~Q~~lw~~~~~~~~~~~Y~~~~~~~l~g~ld~~~l~~A~~~lv~-rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~ 90 (1304)
T 2vsq_A 12 MYYLSPMQEGMLFHAILNPGQSFYLEQITMKVKGSLNIKCLEESMNVIMD-RYDVFRTVFIHEKVKRPVQVVLKKRQFHI 90 (1304)
T ss_dssp EEECCHHHHHHHHHHHHSTTSCTTEEEEEEEEEECCCHHHHHHHHHHHHH-HCGGGGEEEECSSCSSCEEEEESCCCCCE
T ss_pred cCCCCHHHHHHHHHHhhCCCCCceEEEEEEEEcCCcCHHHHHHHHHHHHH-hhhhceEEEEEcCCCeEEEEECCCCCCce
Confidence 469999997644 45544443 457899999999999999999999 999999999875445677765 5444443
Q ss_pred cee-eeC-C----hhHHHHHHHhhhcCCCCCCCC-CceEEEEE---cCceEEEEeecccccccccHHHHHHHhcccCCC-
Q 014554 79 HFV-EVH-D----STSVNDYVAGLSFSSPLSEDK-PLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAGCRLADD- 147 (422)
Q Consensus 79 hv~-~~~-~----~~~l~~~~~~~~~~~pld~~~-PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~~- 147 (422)
++. +.. + ++++++++.+.. .+|||.++ |+|++.++ ++++.+++.+||+++||+|+..++.++...|..
T Consensus 91 ~~~d~~~~~~~~~~~~~~~~~~~~~-~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~ 169 (1304)
T 2vsq_A 91 EEIDLTHLTGSEQTAKINEYKEQDK-IRGFDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNAL 169 (1304)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHH-HHCCCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCchhHHHHHHHHHHHHh-cCCCCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHh
Confidence 322 222 1 456788888888 89999986 99999999 578899999999999999999999998875521
Q ss_pred -CCCCCCCCCCCCCCCCCc---cccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCC--CCCCCCCeEEEEEeec--
Q 014554 148 -PEALPAVAGGKRTESAGK---IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGG--AGVELWPRKLATATFS-- 219 (422)
Q Consensus 148 -p~~~p~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~r~~~~~~~~-- 219 (422)
....+..|...+ -.+.. ........+.+|+.. +....+.+.+... ..............++
T Consensus 170 ~~g~~~~l~~~~~-y~d~~~~~~~~~~~~~~~yW~~~----------L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~ 238 (1304)
T 2vsq_A 170 REQKPYSLPPVKP-YKDYIKWLEKQDKQASLRYWREY----------LEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEA 238 (1304)
T ss_dssp HTTCCCCCCCCCC-THHHHHHHHTSCHHHHHHHHHHH----------HTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHH
T ss_pred hcCCCCCCCCccc-HHHHHHHHhcchhhHHHHHHHHH----------hCCCCccccCCCCCCccccccCcceEEEecCHH
Confidence 001111111111 00000 000001122334322 1000111112111 0000001112222333
Q ss_pred -hHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccC--CCchhhhhhhccCCCCCCCc
Q 014554 220 -IDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQ--PGLQDLSNLMKSNSGTRWGN 296 (422)
Q Consensus 220 -l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~--~~~~~~~~~~~~~~~~~~gN 296 (422)
.+.++++|+++ |+|+|++++||++..|++|..+ .++.+++|++.|.. .+. +...|+
T Consensus 239 ~~~~L~~~a~~~-~~T~~~vllaa~a~~L~r~tg~---------~dvv~G~pvsgR~~~~~~~-----------~~~vG~ 297 (1304)
T 2vsq_A 239 ETKAFTELAKSQ-HTTLSTALQAVWSVLISRYQQS---------GDLAFGTVVSGRPAEIKGV-----------EHMVGL 297 (1304)
T ss_dssp HHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHTC---------SEEEEEEEECCCCTTSTTG-----------GGCCSS
T ss_pred HHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhcCC---------CCEEEEEEeCCCCccchhh-----------hccccc
Confidence 57799999999 9999999999999999999754 37999999999976 322 146799
Q ss_pred eEEEEEeeeeccCCCCCHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhHHHHHHHhcccccceeEEEeccCCCc-
Q 014554 297 KFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLEGHFSYKIGNLVMSWFGAKVACLLNYRIVCNTTFTISNIVGPT- 375 (422)
Q Consensus 297 ~~s~~~~~Lp~~~~~~dp~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SNvpGp~- 375 (422)
++..+.+.+.+ +...++.+.|+++++.+..........+. .+.. .+. ....+++.+++.|.+...
T Consensus 298 fvntlplr~~~-~~~~s~~~ll~~v~~~~~~a~~hq~~p~~-~i~~----~l~--------~~~lf~~~~~~~~~~~~~~ 363 (1304)
T 2vsq_A 298 FINVVPRRVKL-SEGITFNGLLKRLQEQSLQSEPHQYVPLY-DIQS----QAD--------QPKLIDHIIVFENYPLQDA 363 (1304)
T ss_dssp CCEEEEEEEEC-CTTCBHHHHHHHHHHHHHHHGGGTTSCHH-HHHH----SSS--------CSSSCCCEEEECSSCHHHH
T ss_pred ceeEEEEEecC-CCCCcHHHHHHHHHHHHHHhhhcccCCHH-HHHH----HhC--------CCcccceeEEEeecccccc
Confidence 99888888877 23356788999999988777654331111 1111 111 223344556777765321
Q ss_pred --cceeecCceeeeeeeccCCCCceeEEEEEeeCCeEEEEEeccCC
Q 014554 376 --EKITLADNPVAYLRANTSSLPHLIKGRYLGFIKRVNHSLAPPWT 419 (422)
Q Consensus 376 --~~~~~~G~~v~~~~~~~~~~~~~l~v~~~Sy~~~l~~~i~~D~~ 419 (422)
......|..+..+.... ...-.+++.+. .++.+.+.+.+|..
T Consensus 364 ~~~~~~~~g~~~~~~~~~~-~~~~dL~l~~~-~~~~l~~~~~y~~~ 407 (1304)
T 2vsq_A 364 KNEESSENGFDMVDVHVFE-KSNYDLNLMAS-PGDEMLIKLAYNEN 407 (1304)
T ss_dssp SCCCHHHHSEEEEEEEECC-CCCSSEEEEEE-CSSSCEEEEEEETT
T ss_pred cccccccCCceeEeeeccc-ccccCeEEEEe-cCCcEEEEEEECCc
Confidence 11223454454432211 22234566543 47778888877654
No 6
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=99.85 E-value=2.7e-19 Score=180.12 Aligned_cols=294 Identities=14% Similarity=0.038 Sum_probs=180.4
Q ss_pred CCCCCcchhccc---CCCCceE-EEEEEeecCCCChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEe-cccCccCce
Q 014554 6 DEPLTPAGRLFL---QPHMNTI-IHCVVGFERPIDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRE-TSVDIDRHF 80 (422)
Q Consensus 6 ~~~Ls~~d~~~~---~~~~~~~-~~~~~~~~g~~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~-~~~d~~~hv 80 (422)
..|||+.|+.|+ .+....+ +...++++|++|.+.|++++...+. +||.||+++... .|.++++. +..+...++
T Consensus 17 ~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~L~~Al~~lv~-rh~~LRt~f~~~-~~~~~q~v~~~~~~~~~~ 94 (466)
T 2xhg_A 17 NVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGFDPKVIQSVMDKIIE-HHDALRMVYQHE-NGNVVQHNRGLGGQLYDF 94 (466)
T ss_dssp ECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCCCHHHHHHHHHHHHH-HSGGGGEEEECG-GGCCEEEECCSSSCCCEE
T ss_pred CCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCCCHHHHHHHHHHHHH-hChHhheEEecC-CCceeeecccccccccee
Confidence 469999999544 2333333 4457899999999999999999999 999999999874 56677765 432333344
Q ss_pred ee---eC--ChhHHHHHHHhhhcCCCCCCCC-CceEEEEE--cCceEEEEeecccccccccHHHHHHHhcccCCC--CCC
Q 014554 81 VE---VH--DSTSVNDYVAGLSFSSPLSEDK-PLWEVHVL--AEHRCAVFRIHHALGDGISLVSMLLAGCRLADD--PEA 150 (422)
Q Consensus 81 ~~---~~--~~~~l~~~~~~~~~~~pld~~~-PlW~~~li--~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~~~--p~~ 150 (422)
.+ .. +.++..+.+.+.. .+|||.++ |+|++.++ +++..+++.+||+++||+|...++.++...|.. ...
T Consensus 95 ~~~d~~~~~~~~~~~~~~~~~~-~~~fdl~~~pl~r~~l~~~~~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~ 173 (466)
T 2xhg_A 95 FSYNLTAQPDVQQAIEAETQRL-HSSMNLQEGPLVKVALFQTLHGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQ 173 (466)
T ss_dssp EEEECTTCSCHHHHHHHHHHHH-HTTCCTTTCCCEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCcccHHHHHHHHHHHH-HhccCCCCCCeEEEEEEEcCCCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCC
Confidence 32 22 2233333344556 78999975 99999999 444447999999999999999999988775521 011
Q ss_pred CCCCCCCCCCCCCCccc-------cHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCC-CCCeEEEEEeechHH
Q 014554 151 LPAVAGGKRTESAGKIG-------SLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE-LWPRKLATATFSIDD 222 (422)
Q Consensus 151 ~p~~p~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~r~~~~~~~~l~~ 222 (422)
.+..+.....-.+...+ ......+.+|.... .. ...+..|...+.+.. ..........++-+.
T Consensus 174 ~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l------~~---~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~ 244 (466)
T 2xhg_A 174 AISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLE------SQ---AKNVSLPKDYEVTDCKQKSVRNMRIRLHPEE 244 (466)
T ss_dssp CCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHH------HH---CCCCCCCCSSCCSSCBGGGEEEEEEECCHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhh------cc---CCcccCCccccccccccccceEEEEEcCHHH
Confidence 11111111100000000 00000123333221 11 011112221111100 001122344455444
Q ss_pred ---HHHHH-HHcCCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCCCCceE
Q 014554 223 ---MKAVK-KAIAGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKF 298 (422)
Q Consensus 223 ---vk~ia-~~~~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~ 298 (422)
+++.+ +++ |+|++++++||++.+|++|.++ ..+.+++|++.|...... ++.....|+.+
T Consensus 245 ~~~l~~~~~~~~-~~t~~~~llaa~~~~l~~~~~~---------~dv~ig~~~~gR~~~~~~-------~~~~~~vG~f~ 307 (466)
T 2xhg_A 245 TEQLLKHANQAY-QTEINDLLLAALGLAFAEWSKL---------AQIVIHLEGHGREDIIEQ-------ANVARTVGWFT 307 (466)
T ss_dssp HHHHHHTGGGTT-TCCHHHHHHHHHHHHHHHHHCC---------SEEEEEEEECCCCSCSTT-------CCCTTCCSCCC
T ss_pred HHHHHHHhHHhh-CCCHHHHHHHHHHHHHHHHhCC---------CceEEEecCCCCCccccC-------CCcccccccee
Confidence 44434 568 9999999999999999999753 379999999999763100 00125789999
Q ss_pred EEEEeeeeccCCCCCHHHHHHHHHHHHHHHh
Q 014554 299 GMLLLPIYYHKGGADPLSYVKRAKKMIDSKK 329 (422)
Q Consensus 299 s~~~~~Lp~~~~~~dp~~rL~~v~~~~~~~k 329 (422)
..+.+.+.. +...++.+.|++|++.+...+
T Consensus 308 n~lplr~~~-~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 308 SQYPVLLDL-KQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEEEEEEC-SCCCSHHHHHHHHHHHHHHSG
T ss_pred eeccEEEec-CCCCCHHHHHHHHHHHHHhCc
Confidence 988888877 233578899999999987653
No 7
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=99.64 E-value=2.5e-13 Score=137.36 Aligned_cols=386 Identities=9% Similarity=-0.027 Sum_probs=192.1
Q ss_pred CCCCcchhccc------CCCCceEEEEEEeecCC----CChhHHHHHHHHHhh---hhCCccceEEeeCCCCceeEEe--
Q 014554 7 EPLTPAGRLFL------QPHMNTIIHCVVGFERP----IDVPKSKDAVMSSIM---VRHPRFRSVLVRDKRGLEHWRE-- 71 (422)
Q Consensus 7 ~~Ls~~d~~~~------~~~~~~~~~~~~~~~g~----~d~~~l~~~l~~~~~---~~~p~lr~r~~~~~~g~p~W~~-- 71 (422)
|++...+.++. ..+..+++.+-+++..+ ++.++|.+.++..+. +.||.+.+++..++.+.+.|+.
T Consensus 31 R~~~g~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~ 110 (519)
T 3fot_A 31 RRCVGAEAIVGLEEKNRRALYDLYIATSLRNIAPASTLLTLQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYES 110 (519)
T ss_dssp EECCTHHHHHHCHHHHTTTTTCEEEEEEEEECCCTTCCCCHHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEEC
T ss_pred eecCccHHHHHHhhhcCCCcceEEEEEEEEecCCCCccccHHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEec
Confidence 56666666654 24455666666776544 344555444444433 4899999998754233445543
Q ss_pred c--ccCccCc----eeeeCChhHHHHHHHhh------hcCCCCCCCCCceEEEEE----------cC--ceEEEEeeccc
Q 014554 72 T--SVDIDRH----FVEVHDSTSVNDYVAGL------SFSSPLSEDKPLWEVHVL----------AE--HRCAVFRIHHA 127 (422)
Q Consensus 72 ~--~~d~~~h----v~~~~~~~~l~~~~~~~------~~~~pld~~~PlW~~~li----------~~--~~~l~~~~HH~ 127 (422)
+ +.+++.- +.+..+.+.-+++..++ . +... +. +.+.+++| .+ +..|+++.||.
T Consensus 111 ~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~-~~~~-p~-~~~~l~~v~~~~~~~~~~p~~~~~~lv~~~~H~ 187 (519)
T 3fot_A 111 PESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAA-NDNT-PS-KSIELFLLSDVSTDSTPIPQDATVEILFHSNHL 187 (519)
T ss_dssp CSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHT-C-CC-CC-CSCEEEEEESSSSTTSCCCTTCEEEEEEEECGG
T ss_pred CCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccc-ccCC-Cc-cceEEEEEeccccccccCCCCceEEEEEEeCce
Confidence 1 1223221 22211122222232221 2 2211 22 68999997 12 68899999999
Q ss_pred ccccccHHHHHHHhcccCCCCC------CCCCC---------CCCCCCCCC-Ccc-c--cHHHHHHHHHHHHHHHHHHHH
Q 014554 128 LGDGISLVSMLLAGCRLADDPE------ALPAV---------AGGKRTESA-GKI-G--SLWGLLKMVLLSIVFVLEFLL 188 (422)
Q Consensus 128 l~DG~s~~~ll~~l~~~~~~p~------~~p~~---------p~~~~~~~~-~~~-~--~~~~~~~~~~~~~~~~~~~~~ 188 (422)
++||+|+..|+..+++...++. ..+.+ +.+.....+ +.. . .....++.+...+ ....
T Consensus 188 ~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~---~~~~- 263 (519)
T 3fot_A 188 FWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYTSAL---VANY- 263 (519)
T ss_dssp GCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHH---HHHH-
T ss_pred eEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHh---hcCC-
Confidence 9999999999888877543221 11111 110000000 000 0 0111111111111 0100
Q ss_pred HhcccCCCCCcccCCCCCCCCCeEEEEEeec---hHHHHHHHHHc--CCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCc
Q 014554 189 RALWVSDRKTAISGGAGVELWPRKLATATFS---IDDMKAVKKAI--AGATINDVLFGVVSSGLSRYLDHRSPNALPEGL 263 (422)
Q Consensus 189 ~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~---l~~vk~ia~~~--~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~ 263 (422)
. .-..|++...+ ..+.....++ .+++++.||++ +|+|||.++.||++.++.++....+. ++..
T Consensus 264 ~-----~~~~P~~~~~~----~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~---~~~~ 331 (519)
T 3fot_A 264 K-----SRGMKFQPGLA----LPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDL---SDDE 331 (519)
T ss_dssp H-----SCCSBCCCCCC----CEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----C---CTTC
T ss_pred C-----cccCCCCCCCC----CcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCccc---CCCc
Confidence 0 11223332222 2223344454 46677788886 69999999999999999997543111 2224
Q ss_pred ceEEEEEeeeccCCCchhhhhhhccCCCCCCCceEEEEEeeeeccC---CCCCHHHHHHHH--HHHHHHHhhccchhhhH
Q 014554 264 RITGLAMVNIRRQPGLQDLSNLMKSNSGTRWGNKFGMLLLPIYYHK---GGADPLSYVKRA--KKMIDSKKLTLEGHFSY 338 (422)
Q Consensus 264 ~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~gN~~s~~~~~Lp~~~---~~~dp~~rL~~v--~~~~~~~k~~~~~~~~~ 338 (422)
.+.+.+|||+|+....+. ...-.+.....+.+.++... ...++.+.++.+ .+..+.+|+........
T Consensus 332 ~~~~~~pvnlR~~l~~~~--------~~n~~~~~~~~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~n 403 (519)
T 3fot_A 332 VFISPTSVDGRRWLREDI--------ASNFYAMCQTAAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLEN 403 (519)
T ss_dssp CEEEEEEEECGGGBCHHH--------HTSCCSCCEEEEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEEeeeeccccCCCcc--------cccccceeeeeeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCC
Confidence 799999999998865210 00112444444445443300 111222222222 11122222211111100
Q ss_pred HHHHHHHHHHhHHHHHHHhcc----cccceeEEEeccCCCc--cceeec-------CceeeeeeeccCCCCceeEEEEEe
Q 014554 339 KIGNLVMSWFGAKVACLLNYR----IVCNTTFTISNIVGPT--EKITLA-------DNPVAYLRANTSSLPHLIKGRYLG 405 (422)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~SNvpGp~--~~~~~~-------G~~v~~~~~~~~~~~~~l~v~~~S 405 (422)
-.+..++.++ ...+.+++.. .....+..+||++-.. -+-.++ ..+|+++..........+++.+.|
T Consensus 404 p~i~~l~~~~-k~~~~~l~~~~~~~~~~~~tp~lSslG~vd~~lp~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~T 482 (519)
T 3fot_A 404 PFLQALGLRV-HNFEASYLHAKPIPFEGEANPLFISDGINERFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDS 482 (519)
T ss_dssp TTHHHHHHHH-HHHHHHHHHHCSSCCCSBCCCEEEEEEEGGGTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEE
T ss_pred chHHHhHHHH-HHHHHHHhcccCCCCCCccCcccccCCccccccchhhccccCCCCceEEEEEEEEccccCCceEEEEEE
Confidence 0111111111 1111222211 1113578899996666 455565 367778766543335568999999
Q ss_pred eCCeEEEEEeccCCC
Q 014554 406 FIKRVNHSLAPPWTS 420 (422)
Q Consensus 406 y~~~l~~~i~~D~~~ 420 (422)
|+|+++|+++.+..|
T Consensus 483 f~g~L~l~~~yn~a~ 497 (519)
T 3fot_A 483 WRDASTLNIIYNDAN 497 (519)
T ss_dssp ETTEEEEEEEEETTT
T ss_pred ECCEEEEEEEecccc
Confidence 999999999998864
No 8
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=98.24 E-value=0.00015 Score=71.48 Aligned_cols=266 Identities=9% Similarity=0.044 Sum_probs=143.6
Q ss_pred CCCCCcchhcccCCCCceEEEEEEeecCC--C----ChhHHHHHHHHHhhhhCCccceEEeeC-----CCCceeEEe--c
Q 014554 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERP--I----DVPKSKDAVMSSIMVRHPRFRSVLVRD-----KRGLEHWRE--T 72 (422)
Q Consensus 6 ~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~--~----d~~~l~~~l~~~~~~~~p~lr~r~~~~-----~~g~p~W~~--~ 72 (422)
.-+||..|... +..++..+..|..... . ..+.|+++|.+.+. .++.|.-|++.. +...-.+++ .
T Consensus 25 ~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~i~c~~~Gv~fv~A~~ 101 (421)
T 2bgh_A 25 CYKISHLDQLL--LTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLT-HFYPLAGRINVNSSVDCNDSGVPFVEARV 101 (421)
T ss_dssp CCBCCHHHHTS--CSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTT-TSGGGGSEEETTTEEECCCCCEEEEEEEE
T ss_pred ccCCChHHhcc--cccccceEEEEeCCCccccchhhHHHHHHHHHHHHhh-hcchhccccCCCcEEEEcCCceEEEEEEE
Confidence 46788888752 3344444445554322 1 36789999999999 999999998631 112223333 2
Q ss_pred ccCccCceee-eCChhHHHHHHHhhhcCCCC-------CCCCCceEEEEE---cCceEEEEeecccccccccHHHHHHHh
Q 014554 73 SVDIDRHFVE-VHDSTSVNDYVAGLSFSSPL-------SEDKPLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAG 141 (422)
Q Consensus 73 ~~d~~~hv~~-~~~~~~l~~~~~~~~~~~pl-------d~~~PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l 141 (422)
+.+++++... + +...+ .++. .... ..+.|+..+.+- .|+.+|-+.+||+++||.|+..|+...
T Consensus 102 d~~l~~~~~~~p-~~~~~----~~l~-p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~w 175 (421)
T 2bgh_A 102 QAQLSQAIQNVV-ELEKL----DQYL-PSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAW 175 (421)
T ss_dssp SSCHHHHHSCCS-SGGGG----GGGS-SSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHH
T ss_pred cCCHHHHhccCC-ChHHH----HhcC-CCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHH
Confidence 2222222111 1 11112 2222 2221 123577655554 489999999999999999999999865
Q ss_pred cccCC-CCCCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCCCCCeEEEEEeech
Q 014554 142 CRLAD-DPEALPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVELWPRKLATATFSI 220 (422)
Q Consensus 142 ~~~~~-~p~~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~~~~~l 220 (422)
..... .+.. . .+ . .. + +.. +.+. ...+..+ ..... ..-....-.++-
T Consensus 176 a~~~rg~~~~----~--~P-~-----~d--r-~~~-----------l~p~--~~~~~~~--~~~~~--~~~~~~~f~f~~ 223 (421)
T 2bgh_A 176 TATCRGETEI----V--LP-N-----FD--L-AAR-----------HFPP--VDNTPSP--ELVPD--ENVVMKRFVFDK 223 (421)
T ss_dssp HHHHTTCSCC----C--CC-B-----CS--H-HHH-----------HSCC--CTTCCCC--CCCCC--SSEEEEEEEECH
T ss_pred HHHhcCCCCC----C--CC-c-----cc--c-ccc-----------cCCC--cccCCCC--ccCCc--cceEEEEEEECH
Confidence 44221 1111 1 11 0 01 0 000 0000 0011001 00000 122233555666
Q ss_pred HHHHHHHHHcC------CCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCCC
Q 014554 221 DDMKAVKKAIA------GATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTRW 294 (422)
Q Consensus 221 ~~vk~ia~~~~------g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~~ 294 (422)
++++++++... .+|-+|++.|.+-.++-+-.....+ ++ ...++.++||+|+..+.. + +..-.
T Consensus 224 ~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~---~~-~~~~l~~~vd~R~rl~pp-l-------P~~y~ 291 (421)
T 2bgh_A 224 EKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYG---AK-NKFVVVQAVNLRSRMNPP-L-------PHYAM 291 (421)
T ss_dssp HHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSC---CC-SCEEEEEEEESGGGSSSC-C-------CTTBC
T ss_pred HHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCC---CC-CceEEEEEecCccccCCC-C-------CCCcc
Confidence 66666665531 4799999999887777665443211 22 478899999999875411 1 23579
Q ss_pred CceEEEEEeeeeccCCCCCHH-HHHHHHHHHHH
Q 014554 295 GNKFGMLLLPIYYHKGGADPL-SYVKRAKKMID 326 (422)
Q Consensus 295 gN~~s~~~~~Lp~~~~~~dp~-~rL~~v~~~~~ 326 (422)
||.+.......+. +++.++ .-+..|++.++
T Consensus 292 GN~~~~~~~~~~~--~~~~~l~~~a~~ir~ai~ 322 (421)
T 2bgh_A 292 GNIATLLFAAVDA--EWDKDFPDLIGPLRTSLE 322 (421)
T ss_dssp SCCEEEEEEEECT--TCCCCGGGGHHHHHHHTC
T ss_pred ceEEEEEEEEecc--cccccHHHHHHHHHHHHH
Confidence 9999988888877 444443 33444444443
No 9
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=98.17 E-value=0.00018 Score=71.62 Aligned_cols=287 Identities=13% Similarity=0.052 Sum_probs=146.9
Q ss_pred CCCCcchhcccCCCCceEEEEEEeecCCCC------hhHHHHHHHHHhhhhCCccceEEeeCC--CCceeEEecccCccC
Q 014554 7 EPLTPAGRLFLQPHMNTIIHCVVGFERPID------VPKSKDAVMSSIMVRHPRFRSVLVRDK--RGLEHWRETSVDIDR 78 (422)
Q Consensus 7 ~~Ls~~d~~~~~~~~~~~~~~~~~~~g~~d------~~~l~~~l~~~~~~~~p~lr~r~~~~~--~g~p~W~~~~~d~~~ 78 (422)
.+||..|..++. ..++..+..|......+ .+.|+++|.+.+. .++.|.-|++... .|++.....+ ..
T Consensus 22 ~~LS~lD~~~~~-~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~---~~ 96 (453)
T 2xr7_A 22 LPLTYFDHVWLA-FHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLK-YYLPLAGNVACPQDWSGYPELRYVT---GN 96 (453)
T ss_dssp EECCHHHHGGGG-SCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHT-TSGGGGSCCEEESSTTCCCEEEEET---TC
T ss_pred ECCCHHHhhhhh-cCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhh-hccccCeeEEccCCCCCCEEEEecC---CC
Confidence 478888876542 22344555566543211 4789999999999 9999998887642 4554433221 01
Q ss_pred ceee-eC-ChhHHHHHH----------HhhhcCCCCCC---C-----CCceE--EEEE-cCceEEEEeecccccccccHH
Q 014554 79 HFVE-VH-DSTSVNDYV----------AGLSFSSPLSE---D-----KPLWE--VHVL-AEHRCAVFRIHHALGDGISLV 135 (422)
Q Consensus 79 hv~~-~~-~~~~l~~~~----------~~~~~~~pld~---~-----~PlW~--~~li-~~~~~l~~~~HH~l~DG~s~~ 135 (422)
-+.+ .. .+..+.++. .++. . ..+. + .|+-. ++.+ .|+.+|-+.+||+++||.|+.
T Consensus 97 gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~-p-~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~ 174 (453)
T 2xr7_A 97 SVSVIFSESDMDFNYLIGYHPRNTKDFYHFV-P-QLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIV 174 (453)
T ss_dssp CCEEEEEECCSCHHHHTCSSCCCGGGGGGGS-C-CCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHH
T ss_pred ceEEEEEecCCCHHHhhccCCCChhhhhcCC-C-CCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHH
Confidence 1221 11 122333332 1222 1 1111 1 56654 4444 589999999999999999999
Q ss_pred HHHHHhcccCC--C-CC-CCCC-CCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHhcccCCCCC-ccc-CCCCCCC
Q 014554 136 SMLLAGCRLAD--D-PE-ALPA-VAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKT-AIS-GGAGVEL 208 (422)
Q Consensus 136 ~ll~~l~~~~~--~-p~-~~p~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~-~~~~~~~ 208 (422)
.|+........ . +. ..+. .|.-.+.....+ ..+.. . . ... +...+.. +.. .......
T Consensus 175 ~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p-~~~~~---~----~---~~~-----~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 175 KFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDP-NGVGM---S----I---WNE-----MKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp HHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCS-SCHHH---H----T---TTT-----GGGCTTTSCCSCCCCCCSC
T ss_pred HHHHHHHHHhhcCCCcccCCCCCCCccccccccCC-CCcch---H----H---HHh-----ccccCCccccccccCCCCc
Confidence 99887543211 1 10 0010 011011101100 01110 0 0 000 0000100 100 0001101
Q ss_pred CCeEEEEEeechHHHHHHHHHc----CCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhh
Q 014554 209 WPRKLATATFSIDDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSN 284 (422)
Q Consensus 209 ~~r~~~~~~~~l~~vk~ia~~~----~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~ 284 (422)
..+.+....-.++++|+.+... +.+|-+|++.|.+-.++.+-........-++ ...++.++||+|+..+.. +
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~-~~~~l~~~vd~R~rl~pp-l-- 314 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDEN-GMEFFGCAADCRAQFNPP-L-- 314 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTT-SEEEEEEECCTTSCSSSC-C--
T ss_pred eEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCC-cceEEEEEecccccCCCC-C--
Confidence 1344555555566666655542 1489999999988877766654321000023 478999999999876411 1
Q ss_pred hhccCCCCCCCceEEEEEeeeeccCCC---CCHH-HHHHHHHHHHHH
Q 014554 285 LMKSNSGTRWGNKFGMLLLPIYYHKGG---ADPL-SYVKRAKKMIDS 327 (422)
Q Consensus 285 ~~~~~~~~~~gN~~s~~~~~Lp~~~~~---~dp~-~rL~~v~~~~~~ 327 (422)
+..-.||.+.......+. ++ +.++ .-+..|++.+++
T Consensus 315 -----P~~Y~GN~~~~~~~~~~~--~el~~~~~l~~~a~~Ir~ai~~ 354 (453)
T 2xr7_A 315 -----PPSYFGNALVGYVARTRQ--VDLAGKEGFTIAVELIGEAIRK 354 (453)
T ss_dssp -----CTTBCSCCCCEEEEEEEH--HHHTSSSHHHHHHHHHHHHHTT
T ss_pred -----CcccccceeeeeeeeeeH--HHhcCcchHHHHHHHHHHHHHh
Confidence 235789999888877776 31 2343 334555555444
No 10
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=98.15 E-value=9.2e-05 Score=73.46 Aligned_cols=260 Identities=11% Similarity=-0.014 Sum_probs=133.5
Q ss_pred CCCCCcchhcccCCCCceEEEEEEeecCC---CChhHHHHHHHHHhhhhCCccceEEeeCCCCceeEEec----------
Q 014554 6 DEPLTPAGRLFLQPHMNTIIHCVVGFERP---IDVPKSKDAVMSSIMVRHPRFRSVLVRDKRGLEHWRET---------- 72 (422)
Q Consensus 6 ~~~Ls~~d~~~~~~~~~~~~~~~~~~~g~---~d~~~l~~~l~~~~~~~~p~lr~r~~~~~~g~p~W~~~---------- 72 (422)
..+||..|..+. ..++..+..|..++. ...+.|+++|.+.+. .++.|.=|++....|++.....
T Consensus 26 ~~~LS~lD~~~~--~~~~~~~~~y~~~~~~~~~~~~~Lk~sLs~~L~-~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~ 102 (439)
T 4g22_A 26 NLWNSNVDLVVP--NFHTPSVYFYRPTGSSNFFDAKVLKDALSRALV-PFYPMAGRLKRDEDGRIEIECNGEGVLFVEAE 102 (439)
T ss_dssp EECCCHHHHSCC--TTCCCEEEEECCCSCTTTTCHHHHHHHHHHHTT-TTGGGGCEEEECTTSCEEEECCCCCEEEEEEE
T ss_pred eecCChhHhCcc--ccceeeEEEEcCCCCccccHHHHHHHHHHHHHh-hccccceeeeeCCCCCEEEEECCCCCEEEEEE
Confidence 357888887632 233444555554321 246899999999999 8998999998643354433221
Q ss_pred -ccCccCceeeeCChhHHHHHHHhhhcCCCCC---CCCCceEEEEE---cCceEEEEeecccccccccHHHHHHHhcccC
Q 014554 73 -SVDIDRHFVEVHDSTSVNDYVAGLSFSSPLS---EDKPLWEVHVL---AEHRCAVFRIHHALGDGISLVSMLLAGCRLA 145 (422)
Q Consensus 73 -~~d~~~hv~~~~~~~~l~~~~~~~~~~~pld---~~~PlW~~~li---~~~~~l~~~~HH~l~DG~s~~~ll~~l~~~~ 145 (422)
+.+++++-... ....+ .++.-..+.+ .+.|+-.+.+- .|+.+|-+.+||+++||.|+..|+.......
T Consensus 103 ~d~~l~~l~~~~-p~~~~----~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~ 177 (439)
T 4g22_A 103 SDGVVDDFGDFA-PTLEL----RRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMA 177 (439)
T ss_dssp ESSCGGGGTTCC-CCGGG----GGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHH
T ss_pred cCCcHHHhcCCC-CCHHH----HhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHh
Confidence 11111110000 11122 2232011111 13477665554 5899999999999999999999988654321
Q ss_pred -CCCCC-CCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCC----CCCCCCeEEEEEeec
Q 014554 146 -DDPEA-LPAVAGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGA----GVELWPRKLATATFS 219 (422)
Q Consensus 146 -~~p~~-~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~~r~~~~~~~~ 219 (422)
+.+.. .|.....--....++...... ... ...+. +.... ......-....-.++
T Consensus 178 rg~~~~~~P~~dr~~l~~~~pp~~~~~~-----------------~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~f~fs 237 (439)
T 4g22_A 178 RGLDVTLPPFIDRTLLRARDPPQPQFQH-----------------IEY-QPPPA--LAVSPQTAASDSVPETAVSIFKLT 237 (439)
T ss_dssp TTCCCSSCCBCCGGGGCCCSSCCCSSCC-----------------GGG-SCCC-----------------CEEEEEEEEC
T ss_pred CCCCCCCCCccccccccCCCCCCCCcCc-----------------ccc-cCCCC--CcccccccccCCcccceEEEEEEC
Confidence 11111 111100000000000000000 000 00000 00000 000001122344556
Q ss_pred hHHHHHHHHHc------CCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCchhhhhhhccCCCCC
Q 014554 220 IDDMKAVKKAI------AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGLQDLSNLMKSNSGTR 293 (422)
Q Consensus 220 l~~vk~ia~~~------~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~~~~~~~~~~~~~~~ 293 (422)
-++|+++++.. +.+|-+|++.|.+-.++-+- ++.. ++ ...++.++||+|+..+.. -+..-
T Consensus 238 ~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rA---r~~~--~~-~~~~l~~~vd~R~rl~Pp--------lp~~Y 303 (439)
T 4g22_A 238 REQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKA---RGLE--VD-QGTKLYIATDGRARLRPS--------LPPGY 303 (439)
T ss_dssp HHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHH---TTCC--TT-CEEEEEEEEECTTTSSSC--------CCTTB
T ss_pred HHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHh---cCCC--CC-CcEEEEEEEcccCCCCCC--------CCCCc
Confidence 66666665543 14788999988777665544 2211 33 478999999999876411 12357
Q ss_pred CCceEEEEEeeeec
Q 014554 294 WGNKFGMLLLPIYY 307 (422)
Q Consensus 294 ~gN~~s~~~~~Lp~ 307 (422)
.||.+.......+.
T Consensus 304 ~GN~v~~~~~~~~~ 317 (439)
T 4g22_A 304 FGNVIFTATPIAIA 317 (439)
T ss_dssp CSCCEEEECCEEEH
T ss_pred ccceeehhhcceEH
Confidence 89999888777766
No 11
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=97.75 E-value=0.021 Score=56.61 Aligned_cols=276 Identities=15% Similarity=0.039 Sum_probs=138.9
Q ss_pred CCCCcchhcccCCCCceEEEEEEeecCC----C--ChhHHHHHHHHHhhhhCCccceEEe-eC-CCCceeEEecccCccC
Q 014554 7 EPLTPAGRLFLQPHMNTIIHCVVGFERP----I--DVPKSKDAVMSSIMVRHPRFRSVLV-RD-KRGLEHWRETSVDIDR 78 (422)
Q Consensus 7 ~~Ls~~d~~~~~~~~~~~~~~~~~~~g~----~--d~~~l~~~l~~~~~~~~p~lr~r~~-~~-~~g~p~W~~~~~d~~~ 78 (422)
-+||..|..+... .++..+..|..... . ..+.|+++|.+.+. .++.|.-|++ .. ..|++.....+ ..
T Consensus 27 ~~LS~lD~~~~~~-~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~g~~~i~c~~---~~ 101 (454)
T 2e1v_A 27 LQLTFFDFFWLRS-PPINNLFFYELPITRSQFTETVVPNIKHSLSITLK-HFYPFVGKLVVYPAPTKKPEICYVE---GD 101 (454)
T ss_dssp EECCHHHHTTTTC-CCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHT-TCGGGGSEEEECSSSSSCCEEEECT---TC
T ss_pred ecCchHHhhhhcc-CCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhh-hccccceeeeeccCCCCCEEEEECC---CC
Confidence 4788888765422 23445555655332 1 15789999999999 9999999997 42 33444332210 00
Q ss_pred ceee-e---C-ChhHHH-------HHHHhhhcCCCCCC--------CCCceE--EEEE-cCceEEEEeecccccccccHH
Q 014554 79 HFVE-V---H-DSTSVN-------DYVAGLSFSSPLSE--------DKPLWE--VHVL-AEHRCAVFRIHHALGDGISLV 135 (422)
Q Consensus 79 hv~~-~---~-~~~~l~-------~~~~~~~~~~pld~--------~~PlW~--~~li-~~~~~l~~~~HH~l~DG~s~~ 135 (422)
-+.+ . + +-+++. ....++. .. .+. +.|+-. ++.+ .|+.+|-+.+||+++||.|+.
T Consensus 102 gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~-p~-~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~ 179 (454)
T 2e1v_A 102 SVAVTFAECNLDLNELTGNHPRNCDKFYDLV-PI-LGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRF 179 (454)
T ss_dssp CEEEEEEEECSCGGGTSSSSCEEGGGGGGGS-CC-CCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHH
T ss_pred cEEEEEEEeCCCHHHhcCCCCCcchhhhcCC-CC-CCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHH
Confidence 1110 0 0 111110 0112222 21 111 125544 4444 589999999999999999999
Q ss_pred HHHHHhcccCC--CC-C--CCCCC-CCCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHHhc---ccCCCCCcccCCCCC
Q 014554 136 SMLLAGCRLAD--DP-E--ALPAV-AGGKRTESAGKIGSLWGLLKMVLLSIVFVLEFLLRAL---WVSDRKTAISGGAGV 206 (422)
Q Consensus 136 ~ll~~l~~~~~--~p-~--~~p~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~ 206 (422)
.|+........ .. . ..+.. |.-.+ ... . +. +.. .. ........ ... +.. +. . ..
T Consensus 180 ~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~----~-p~-~~~---~~---~~~~~~~~~~~~~~-~~~-~~-~-~~ 242 (454)
T 2e1v_A 180 CFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK----Y-PM-LDE---AY---LKRAKVESFNEDYV-TQS-LA-G-PS 242 (454)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC----C-HH-HHH---HH---HHHTTCTTHHHHCC-CCC-CC-C-CC
T ss_pred HHHHHHHHHhccCCCccccCCCCCCCcccc-cCC----C-CC-cch---HH---HHhhhccccccccC-ccc-CC-C-CC
Confidence 99886543211 11 0 00010 11001 000 1 11 110 00 00000000 000 110 11 0 11
Q ss_pred CCCCeEEEEEeech---HHHHHHHHHc----CCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCc
Q 014554 207 ELWPRKLATATFSI---DDMKAVKKAI----AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGL 279 (422)
Q Consensus 207 ~~~~r~~~~~~~~l---~~vk~ia~~~----~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~ 279 (422)
......-.++- +++|+.+... +.+|-+|++.|.+-.++.+-. . + ...++.++||+|+..+.
T Consensus 243 ---~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~-----~-~~~~l~~~vd~R~rl~p 310 (454)
T 2e1v_A 243 ---DKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N-----D-KLQLFGFPIDRRARMKP 310 (454)
T ss_dssp ---CEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C-----C-SEEEEEEEEECGGGSSS
T ss_pred ---CceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C-----C-CceEEEEEecchhccCC
Confidence 22223444454 4455444332 147999999998877766554 2 2 37899999999987541
Q ss_pred hhhhhhhccCCCCCCCceEEEEEeeeeccCCC-C--CHH-HHHHHHHHHHHHH
Q 014554 280 QDLSNLMKSNSGTRWGNKFGMLLLPIYYHKGG-A--DPL-SYVKRAKKMIDSK 328 (422)
Q Consensus 280 ~~~~~~~~~~~~~~~gN~~s~~~~~Lp~~~~~-~--dp~-~rL~~v~~~~~~~ 328 (422)
. + +..-.||.+.......+. ++ . .++ .-+..|++.+++.
T Consensus 311 p-l-------P~~Y~GN~~~~~~~~~~~--~el~~~~~l~~~a~~Ir~ai~~~ 353 (454)
T 2e1v_A 311 P-I-------PTAYFGNCVGGCAAIAKT--NLLIGKEGFITAAKLIGENLHKT 353 (454)
T ss_dssp C-C-------CTTBCSCCEEEEEEEEEG--GGTSHHHHHHHHHHHHHHHHHHH
T ss_pred C-C-------CcccccceeeeEEeecch--hhccccccHHHHHHHHHHHHHhh
Confidence 1 1 235789999988888877 32 1 233 3345555555554
No 12
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=97.53 E-value=0.0093 Score=59.04 Aligned_cols=268 Identities=15% Similarity=0.032 Sum_probs=129.4
Q ss_pred CCCCcchhcccCCCCceEEEEEEeecCCCC----hhHHHHHHHHHhhhhCCccceEEeeCC-----CCceeEEecccCcc
Q 014554 7 EPLTPAGRLFLQPHMNTIIHCVVGFERPID----VPKSKDAVMSSIMVRHPRFRSVLVRDK-----RGLEHWRETSVDID 77 (422)
Q Consensus 7 ~~Ls~~d~~~~~~~~~~~~~~~~~~~g~~d----~~~l~~~l~~~~~~~~p~lr~r~~~~~-----~g~p~W~~~~~d~~ 77 (422)
.+||..|+..--...++..+..|....+.+ .+.|+++|.+.+. .++-|.-|++... .|.++-...+ ...
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~~~~~~~~~Lk~sLs~~L~-~~~plAGRl~~~~~~~~~~g~~~i~~~~-~~~ 82 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSE-AVPWVAGQVKAEGISEGNTGTSFIVPFE-DVP 82 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGGGHHHHHHHHHHHHHHHHH-HSGGGGCEEEEESCBTTBCCEEEEECCC-SSC
T ss_pred ccCChhhcCccccccceeEEEEEECCCCCCHHHHHHHHHHHHHHHHH-hCCceeEEEEECCCCCCCCCcEEEeecC-CCC
Confidence 478888876311123344445555422211 5789999999999 8988999987632 2443322111 110
Q ss_pred CceeeeC--------ChhHHHHH------HH-hhhcC---CCC------CCCCCceE--EEEEcCceEEEEeeccccccc
Q 014554 78 RHFVEVH--------DSTSVNDY------VA-GLSFS---SPL------SEDKPLWE--VHVLAEHRCAVFRIHHALGDG 131 (422)
Q Consensus 78 ~hv~~~~--------~~~~l~~~------~~-~~~~~---~pl------d~~~PlW~--~~li~~~~~l~~~~HH~l~DG 131 (422)
.+.+.+ +-+++.+. +. .+... -|. +.+.|+-. ++++.|+.+|-+.+||+++||
T Consensus 83 -~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~~GG~~lg~~~~H~v~Dg 161 (451)
T 2rkv_A 83 -RVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDM 161 (451)
T ss_dssp -EEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEEBTEEEEEEEEETTTCCH
T ss_pred -eEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEecCceeeeeeehhccccH
Confidence 011111 11222211 00 11101 111 11257654 443378899999999999999
Q ss_pred ccHHHHHHHhcccC-CCCCCCCC--CCCCCCCCCCCc-cccHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccCCCCCC
Q 014554 132 ISLVSMLLAGCRLA-DDPEALPA--VAGGKRTESAGK-IGSLWGLLKMVLLSIVFVLEFLLRALWVSDRKTAISGGAGVE 207 (422)
Q Consensus 132 ~s~~~ll~~l~~~~-~~p~~~p~--~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 207 (422)
.|+..|+....... +.+..... .|.-.+....+. .+..+.. .+ ... ....+..........
T Consensus 162 ~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~---------~~----~~~-~~~~~~~~~~~~~~~- 226 (451)
T 2rkv_A 162 VGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGP---------EV----DHQ-IVKADVAGGDAVLTP- 226 (451)
T ss_dssp HHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCG---------GG----TTC-BCCTTSCC--------
T ss_pred HHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCc---------cc----ccc-ccCCCCCCCCCCCCC-
Confidence 99999988654321 11110000 000000000000 0000000 00 000 000000000000000
Q ss_pred CCCeEEEEEeechHHHHHHHHHc--------CCCchhHHHHHHHHHHHHHHHhhhCCCCCCCCcceEEEEEeeeccCCCc
Q 014554 208 LWPRKLATATFSIDDMKAVKKAI--------AGATINDVLFGVVSSGLSRYLDHRSPNALPEGLRITGLAMVNIRRQPGL 279 (422)
Q Consensus 208 ~~~r~~~~~~~~l~~vk~ia~~~--------~g~TvNdvllaa~a~al~~~~~~~~~~~~p~~~~l~~~vPvslR~~~~~ 279 (422)
..-....-.++-++|++++++. +.+|-+|++.|.+-.++-+-...... ++ ...++.++||+|+..+.
T Consensus 227 -~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~---~~-~~~~l~~~vd~R~rl~l 301 (451)
T 2rkv_A 227 -VSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERID---GS-APTEFCRAVDARPAMGV 301 (451)
T ss_dssp -CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSC---TT-SEEEEEEEEECHHHHTC
T ss_pred -CCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCC---CC-CceEEEEEecccccCCC
Confidence 0112234445555555544432 13799999999887777665411111 33 47899999999976432
Q ss_pred hhhhhhhccCCCCCCCceEEEEEeeeec
Q 014554 280 QDLSNLMKSNSGTRWGNKFGMLLLPIYY 307 (422)
Q Consensus 280 ~~~~~~~~~~~~~~~gN~~s~~~~~Lp~ 307 (422)
+..-.||.+.......+.
T Consensus 302 ----------P~~y~GN~~~~~~~~~~~ 319 (451)
T 2rkv_A 302 ----------SNNYPGLLQNMTYHNSTI 319 (451)
T ss_dssp ----------CTTCCSCCEEEEEEEEEH
T ss_pred ----------CCCCcccceeeecccCcH
Confidence 235789999888877766
No 13
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=89.26 E-value=5.1 Score=35.19 Aligned_cols=62 Identities=13% Similarity=0.038 Sum_probs=42.6
Q ss_pred EEEEEeechHHHHHHHHHcC----CCchhHHHHHHHHHHHHHHHhhhC---CC--CCCCCcceEEEEEeee
Q 014554 212 KLATATFSIDDMKAVKKAIA----GATINDVLFGVVSSGLSRYLDHRS---PN--ALPEGLRITGLAMVNI 273 (422)
Q Consensus 212 ~~~~~~~~l~~vk~ia~~~~----g~TvNdvllaa~a~al~~~~~~~~---~~--~~p~~~~l~~~vPvsl 273 (422)
...+.++++..+.+.+++.. +.|+|++++-|++.||+++-.-+. +. ++-....+.+++.|+.
T Consensus 32 ~~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~~N~~~~~~~~~i~~~~~v~igiAV~~ 102 (224)
T 3rqc_A 32 FTVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPYLNAIYDETRRVYILKKYYNIGIAVDT 102 (224)
T ss_dssp EEEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGGGSBBCCSSTTCCCEECSCCEEEEEEC
T ss_pred EEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhheEEeCCCCEEEEeCccceEeEEEc
Confidence 34578889888888777631 679999999999999999854332 11 1111135777888874
No 14
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=86.19 E-value=9.4 Score=33.92 Aligned_cols=39 Identities=18% Similarity=0.205 Sum_probs=28.9
Q ss_pred EEEEeechHHHHHHHH---H------cCCCchhHHHHHHHHHHHHHHHh
Q 014554 213 LATATFSIDDMKAVKK---A------IAGATINDVLFGVVSSGLSRYLD 252 (422)
Q Consensus 213 ~~~~~~~l~~vk~ia~---~------~~g~TvNdvllaa~a~al~~~~~ 252 (422)
..+.++++..+.+.++ . . +.|+|++++-|++.||+++=.
T Consensus 42 ~~~~evDvt~l~~~r~~~k~~~~~~g~-kls~~~~~ikA~~~Al~~~P~ 89 (243)
T 1dpb_A 42 TQFESADITELEAFRVAQKAVAEKAGV-KLTVLPLLLKACAYLLKELPD 89 (243)
T ss_dssp EEEEEEECHHHHHHHHHTHHHHHHTTC-CCCSHHHHHHHHHHHHHHSGG
T ss_pred EEEEEEEhHHHHHHHHHHhhhhhhccC-CCChHHHHHHHHHHHHHhChH
Confidence 3467777766655432 2 5 899999999999999998744
No 15
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=85.31 E-value=8 Score=34.14 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=28.7
Q ss_pred EEEEeechHHHHHHHHH----------cCCCchhHHHHHHHHHHHHHHHh
Q 014554 213 LATATFSIDDMKAVKKA----------IAGATINDVLFGVVSSGLSRYLD 252 (422)
Q Consensus 213 ~~~~~~~l~~vk~ia~~----------~~g~TvNdvllaa~a~al~~~~~ 252 (422)
..+.++++..+.+.+++ . +.|+|++++-|++.||+++=.
T Consensus 31 ~~~~evdvt~l~~~r~~~k~~~~~~~g~-kls~~~~~ikA~~~Al~~~P~ 79 (233)
T 1scz_A 31 TTFNEVNMKPIMDLRKQYGEAFEKRHGI-RLGFMSFYVKAVVEALKRYPE 79 (233)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSS-CCCSHHHHHHHHHHHHHHCTT
T ss_pred EEEEEEEcHHHHHHHHHHHhhhhhhcCC-cccHHHHHHHHHHHHHHhChH
Confidence 34667777666554222 5 889999999999999988743
No 16
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=74.48 E-value=21 Score=31.86 Aligned_cols=39 Identities=8% Similarity=0.119 Sum_probs=28.2
Q ss_pred EEEEeechHHHHHHHH----------HcCCCchhHHHHHHHHHHHHHHHh
Q 014554 213 LATATFSIDDMKAVKK----------AIAGATINDVLFGVVSSGLSRYLD 252 (422)
Q Consensus 213 ~~~~~~~l~~vk~ia~----------~~~g~TvNdvllaa~a~al~~~~~ 252 (422)
..+.++++..+.+.++ .. +.|+|++++-|++.||+++-.
T Consensus 45 t~~~evDvt~l~~~r~~~k~~~~~~~g~-kls~~~~iikAva~AL~~~P~ 93 (256)
T 3mae_A 45 WMMVEVDATGLVRYRNAVKDSFKKEEGY-SLTYFAFFIKAVAQALKEFPQ 93 (256)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHSS-CCCHHHHHHHHHHHHHHHCTT
T ss_pred EEEEEEEHHHHHHHHHHHHhhhhhhcCC-CccHHHHHHHHHHHHHHhCHH
Confidence 3466677666554432 24 689999999999999988743
No 17
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=66.31 E-value=32 Score=30.27 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=37.2
Q ss_pred EEEeechHHHHHHHHH--------cCCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEeee
Q 014554 214 ATATFSIDDMKAVKKA--------IAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMVNI 273 (422)
Q Consensus 214 ~~~~~~l~~vk~ia~~--------~~g~TvNdvllaa~a~al~~~~~~~~---~~~~p~~~~l~~~vPvsl 273 (422)
.+.++++..+.+.+++ . +.|+|++++-|++.||+++=.-+. +.++-....+.+++.|+.
T Consensus 40 ~~~evDvt~l~~~r~~~k~~~~~~~-kls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igvAV~~ 109 (239)
T 3b8k_A 40 LSIDVNMGEVLLVRKELNKILEGRS-KISVNDFIIKASALACLKVPEANSSWMDTVIRQNHVVDVSVAVST 109 (239)
T ss_dssp EEEEECCTTHHHHHHHTHHHHTTSS-CCCHHHHHHHHHHHHHHHCCCSCTTSCCCSSSCSCCCCEEECEEC
T ss_pred EEEEEEcHHHHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEeCceeEEEEEEc
Confidence 3556666555554333 5 899999999999999988733221 111212236778888863
No 18
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=64.65 E-value=8.1 Score=27.56 Aligned_cols=30 Identities=23% Similarity=0.352 Sum_probs=23.2
Q ss_pred hHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhh
Q 014554 220 IDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (422)
Q Consensus 220 l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~ 254 (422)
-.++|.+|... |.|++|++--+ ++.|+.++
T Consensus 46 h~rlK~~Aa~~-g~Smsdvvrel----i~~~L~~~ 75 (76)
T 1p94_A 46 HTRFKAACARK-GTSITDVVNQL----VDNWLKEN 75 (76)
T ss_dssp HHHHHHHHHHH-TCCHHHHHHHH----HHHHHHHC
T ss_pred HHHHHHHHHHc-CCCHHHHHHHH----HHHHHHhc
Confidence 35689999999 99999998555 55666654
No 19
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=60.65 E-value=62 Score=27.95 Aligned_cols=61 Identities=13% Similarity=-0.032 Sum_probs=45.1
Q ss_pred EEEEEeechHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhC----CCCCCCCcceEEEEEe-ee
Q 014554 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS----PNALPEGLRITGLAMV-NI 273 (422)
Q Consensus 212 ~~~~~~~~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~----~~~~p~~~~l~~~vPv-sl 273 (422)
...+.++++..+.+.+++. +.|+|+.++=|++.||+++-.-+. +.++-....+.++++| +.
T Consensus 30 ~~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i~igvAVf~t 95 (217)
T 2i9d_A 30 LSITSEVECGGARQRAKAA-GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTIDMLSPIKIK 95 (217)
T ss_dssp EEEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCCEEEEEEECS
T ss_pred EEEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEecccCeEEEEEec
Confidence 3458889999999999999 999999999999999998743321 1111111357788888 64
No 20
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=57.37 E-value=14 Score=25.69 Aligned_cols=28 Identities=11% Similarity=0.229 Sum_probs=23.8
Q ss_pred hHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 014554 220 IDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (422)
Q Consensus 220 l~~vk~ia~~~~g~TvNdvllaa~a~al~ 248 (422)
-++++..|+.. |.|+|..+..++..+|.
T Consensus 31 ~~~L~~~A~~~-grSlNaeIv~~Le~sl~ 58 (69)
T 3qoq_A 31 REQIAEVARSH-HRSMNSEIIARLEQSLL 58 (69)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHH
Confidence 47789999999 99999999888776664
No 21
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=55.99 E-value=17 Score=23.78 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=21.8
Q ss_pred hHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 014554 220 IDDMKAVKKAIAGATINDVLFGVVSSGL 247 (422)
Q Consensus 220 l~~vk~ia~~~~g~TvNdvllaa~a~al 247 (422)
-+.++..|+.. |.|+|..+..++..++
T Consensus 19 ~~~l~~~A~~~-grS~N~~i~~~L~~~l 45 (53)
T 1baz_A 19 LDLVRKVAEEN-GRSVNSEIYQRVMESF 45 (53)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 35688889999 9999999987766554
No 22
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=49.61 E-value=24 Score=24.11 Aligned_cols=29 Identities=17% Similarity=0.330 Sum_probs=24.1
Q ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHH
Q 014554 221 DDMKAVKKAIAGATINDVLFGVVSSGLSRY 250 (422)
Q Consensus 221 ~~vk~ia~~~~g~TvNdvllaa~a~al~~~ 250 (422)
+.++..|+.. |.|+|..+..++..++...
T Consensus 20 ~~l~~~A~~~-GrSlN~~Iv~~L~~~l~~~ 48 (64)
T 1nla_A 20 DLVRKVAEEN-GRSVNSEIYQRVMESFKKE 48 (64)
T ss_dssp HHHHHHHHHH-TSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCHHHHHHHHHHHHHhcc
Confidence 5678889999 9999999998888776554
No 23
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=46.31 E-value=9 Score=33.28 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=21.7
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-|.+.+||.++||.-+.+++..+-.
T Consensus 182 ~lsls~DHRvvDG~~aa~Fl~~lk~ 206 (213)
T 3cla_A 182 PLSVQVHHAVCDGFHVARFINRLQE 206 (213)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEcccccChHHHHHHHHHHHH
Confidence 5789999999999999999877643
No 24
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=44.45 E-value=10 Score=33.10 Aligned_cols=23 Identities=26% Similarity=0.251 Sum_probs=20.9
Q ss_pred EEEEeecccccccccHHHHHHHh
Q 014554 119 CAVFRIHHALGDGISLVSMLLAG 141 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l 141 (422)
-|.+.+||.++||.-+.+++..+
T Consensus 190 ~lsls~DHRvvDG~~aa~Fl~~l 212 (217)
T 2i9d_A 190 PIAMTIHHGFIDGHHLSLFYKKV 212 (217)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHH
T ss_pred EEEEEecchhhChHHHHHHHHHH
Confidence 67899999999999999998876
No 25
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=43.59 E-value=11 Score=33.01 Aligned_cols=25 Identities=28% Similarity=0.348 Sum_probs=21.7
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-|.+.+||.++||.-+.+++..+-.
T Consensus 186 ~lsls~DHRvvDG~~aa~Fl~~lk~ 210 (219)
T 1q23_A 186 PLAIQVHHAVCDGFHVGRMLNELQQ 210 (219)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEEchhhChHHHHHHHHHHHH
Confidence 6789999999999999999877643
No 26
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=40.45 E-value=12 Score=32.85 Aligned_cols=31 Identities=19% Similarity=0.321 Sum_probs=24.9
Q ss_pred EEEEeecccccccccHHHHHHHhcccCCCCC
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~~~~~p~ 149 (422)
-+.+.+||.+.||.-+.+|+..+-+...+|.
T Consensus 188 ~lsls~DHRviDGa~aa~Fl~~l~~~le~p~ 218 (224)
T 3rqc_A 188 YLSLSCDHRLIDGAVATRFIVDLKKVIEDPN 218 (224)
T ss_dssp CEEEEEETTTSCHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEEeccceecHHHHHHHHHHHHHHHhCHH
Confidence 3789999999999999999887765444554
No 27
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=39.90 E-value=23 Score=30.83 Aligned_cols=61 Identities=10% Similarity=-0.023 Sum_probs=43.8
Q ss_pred EEEEEeechHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEe-ee
Q 014554 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (422)
Q Consensus 212 ~~~~~~~~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~---~~~~p~~~~l~~~vPv-sl 273 (422)
...+.++++..+.+.+++. +.|+|+.++=|++.||+++=.-+. +.++-....+.+++.| +.
T Consensus 33 ~t~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAV~~t 97 (219)
T 1q23_A 33 YNQTVQLDITAFLKTVKKN-KHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHE 97 (219)
T ss_dssp EEEEEEEECHHHHHHHHHT-TCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEEhHHHHHHHHHc-CCCHHHHHHHHHHHHHHhChHhhEEEECCEEEEecccCeEEEEEec
Confidence 3458899999999999999 999999999999999987743221 0011111256777777 64
No 28
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=36.87 E-value=30 Score=29.90 Aligned_cols=61 Identities=11% Similarity=0.071 Sum_probs=44.1
Q ss_pred EEEEEeechHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhC---CCCCCCCcceEEEEEe-ee
Q 014554 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS---PNALPEGLRITGLAMV-NI 273 (422)
Q Consensus 212 ~~~~~~~~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~---~~~~p~~~~l~~~vPv-sl 273 (422)
...+.++++..+.+.+++. +.|+|+.++=|++.||+++-.-+. +.++-....+.+++.| +.
T Consensus 28 ~~~~~evDvt~l~~~rk~~-~ls~~~~~ikAv~~Al~~~P~~Na~~~~~~i~~~~~v~igiAVf~t 92 (213)
T 3cla_A 28 FSLTSKIDITTLKKSLDDS-AYKFYPVMIYLIAQAVNQFDELRMAIKDDELIVWDSVDPQFTVFHQ 92 (213)
T ss_dssp EEEEEEEECHHHHHHHHTS-SCCHHHHHHHHHHHHHTTCGGGSEEEETTEEEEESCCEEEEEEEET
T ss_pred EEEEEEEEHHHHHHHHHHh-CCCHHHHHHHHHHHHHhhCHHhhEEEECCEEEEEeccceeEEEEeC
Confidence 3458889999999999999 999999999999999987743221 0011111357777877 64
No 29
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=35.77 E-value=55 Score=20.83 Aligned_cols=32 Identities=25% Similarity=0.325 Sum_probs=24.3
Q ss_pred chHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhC
Q 014554 219 SIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRS 255 (422)
Q Consensus 219 ~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~ 255 (422)
-.+.++.+|+.. |.|.++++-- |+..|+.++.
T Consensus 20 l~~~l~~~a~~~-g~s~s~~ir~----ai~~~l~~~~ 51 (55)
T 2k9i_A 20 WHDRLMEIAKEK-NLTLSDVCRL----AIKEYLDNHD 51 (55)
T ss_dssp HHHHHHHHHHHH-TCCHHHHHHH----HHHHHHHHHC
T ss_pred HHHHHHHHHHHh-CCCHHHHHHH----HHHHHHHHhH
Confidence 357788899999 9999998854 5566766654
No 30
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=34.25 E-value=12 Score=33.00 Aligned_cols=25 Identities=24% Similarity=0.224 Sum_probs=21.8
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-+.+.+||.++||.-+.+|+..+-.
T Consensus 197 ~lsls~DHRviDGa~aa~Fl~~lk~ 221 (233)
T 1scz_A 197 YLALSYDHRLIDGRESVGFLVTIKE 221 (233)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEEcceeechHHHHHHHHHHHH
Confidence 4789999999999999999887654
No 31
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=33.50 E-value=19 Score=31.94 Aligned_cols=25 Identities=4% Similarity=-0.126 Sum_probs=21.9
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-+.+.+||.++||.-+.+|+..+-.
T Consensus 209 ~lsls~DHRviDGa~aa~Fl~~lk~ 233 (243)
T 1dpb_A 209 PLSLSYDCRVINGAAAARFTKRLGD 233 (243)
T ss_dssp EEEEEEETTTSCHHHHHHHHHHHHH
T ss_pred EEEEEECcccccHHHHHHHHHHHHH
Confidence 5889999999999999999887654
No 32
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=33.34 E-value=16 Score=32.23 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=21.9
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-+.+.+||.++||.-+.+|+..+-.
T Consensus 205 ~lsls~DHRviDGa~aa~Fl~~lk~ 229 (239)
T 3b8k_A 205 SVTLSCDHRVVDGAVGAQWLAEFRK 229 (239)
T ss_dssp EEEECCCCCSSCHHHHHHHHHHHHH
T ss_pred EEEEEEcceeechHHHHHHHHHHHH
Confidence 5899999999999999999887654
No 33
>2an7_A Protein PARD; bacterial antidote, ribbon-helix-helix, DNA-binding motif, plasmid addiction, DNA binding protein; NMR {Escherichia coli}
Probab=32.51 E-value=30 Score=24.68 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.3
Q ss_pred HHHHHHHHHcCCCchhHHHHHHH
Q 014554 221 DDMKAVKKAIAGATINDVLFGVV 243 (422)
Q Consensus 221 ~~vk~ia~~~~g~TvNdvllaa~ 243 (422)
..+|++|+.. |.|+|+++.-.+
T Consensus 14 ~rLKalAa~q-G~SInqli~E~l 35 (83)
T 2an7_A 14 QSLKALAALQ-GKTIKQYALERL 35 (83)
T ss_dssp HHHHHHHHHH-TSCHHHHHHHHT
T ss_pred HHHHHHHHHc-CCcHHHHHHHHc
Confidence 5699999999 999999998764
No 34
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=30.30 E-value=23 Score=31.81 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=21.8
Q ss_pred EEEEeecccccccccHHHHHHHhcc
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCR 143 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~ 143 (422)
-+.+.+||-++||.-+.+|+..+-.
T Consensus 225 ~lsls~DHRviDGa~aa~Fl~~lk~ 249 (262)
T 2ii3_A 225 NVSWSADHRIIDGATVSRFSNLWKS 249 (262)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHH
T ss_pred EEEEEECcceecHHHHHHHHHHHHH
Confidence 4789999999999999999887654
No 35
>2kel_A SVTR protein, uncharacterized protein 56B; homodimer, ribbon-helix-helix, transcription repres; NMR {Sulfolobus islandicus rod-shaped virus}
Probab=28.10 E-value=86 Score=20.60 Aligned_cols=29 Identities=14% Similarity=0.247 Sum_probs=21.6
Q ss_pred HHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhh
Q 014554 221 DDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHR 254 (422)
Q Consensus 221 ~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~ 254 (422)
.+++..|... |.|+|+++--| |..|+..+
T Consensus 26 ~rlk~~Aa~~-g~Sln~~i~eA----L~~yl~~~ 54 (56)
T 2kel_A 26 TRLKVYCAKN-NLQLTQAIEEA----IKEYLQKR 54 (56)
T ss_dssp HHHHHHHHHS-CCCHHHHHHHH----HHHHHHHH
T ss_pred HHHHHHHHHc-CCCHHHHHHHH----HHHHHHHh
Confidence 5577888889 99999998554 55666543
No 36
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=27.05 E-value=71 Score=24.78 Aligned_cols=27 Identities=19% Similarity=0.388 Sum_probs=22.0
Q ss_pred hHHHHHHHHHcCCCchhHHHHHHHHHHH
Q 014554 220 IDDMKAVKKAIAGATINDVLFGVVSSGL 247 (422)
Q Consensus 220 l~~vk~ia~~~~g~TvNdvllaa~a~al 247 (422)
-+.++..|+.. |.|+|..+..++..++
T Consensus 30 h~~La~~Ak~e-GrSLN~eIv~~Le~sl 56 (120)
T 1u9p_A 30 LDLVRKVAEEN-GRSVNSEIYQRVMESF 56 (120)
T ss_dssp HHHHHHHHHHH-TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 36688889999 9999999988877553
No 37
>1y9b_A Conserved hypothetical protein; MCSG, structural genomics, conserved hypoth protein, PSI, protein structure initiative; 2.20A {Vibrio cholerae o1 biovar eltor} SCOP: a.43.1.9
Probab=26.61 E-value=1e+02 Score=22.45 Aligned_cols=34 Identities=12% Similarity=0.229 Sum_probs=27.7
Q ss_pred hHHHHHHHHHcCC-CchhHHHHHHHHHHHHHHHhhh
Q 014554 220 IDDMKAVKKAIAG-ATINDVLFGVVSSGLSRYLDHR 254 (422)
Q Consensus 220 l~~vk~ia~~~~g-~TvNdvllaa~a~al~~~~~~~ 254 (422)
-+.|++.+... | .|+||.++.+...+-.+-+.++
T Consensus 17 k~lI~~AA~~~-G~~s~s~Fv~~aa~~~A~~vi~~~ 51 (90)
T 1y9b_A 17 QDLLAKAAALA-GMSSINSFVLNAAIEKAKQVIERE 51 (90)
T ss_dssp HHHHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 45577788888 9 6999999999888888877664
No 38
>2bsq_E FITA, trafficking protein A; transcription, transcription regulation complex, PIN domain, ribbon-helix-helix, DNA binding; HET: 5IU; 3.0A {Neisseria gonorrhoeae} SCOP: a.43.1.8 PDB: 2h1o_E*
Probab=25.67 E-value=91 Score=22.08 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=23.9
Q ss_pred hHHHHHHHHHcCCCchhHHHHHHHHHHHH
Q 014554 220 IDDMKAVKKAIAGATINDVLFGVVSSGLS 248 (422)
Q Consensus 220 l~~vk~ia~~~~g~TvNdvllaa~a~al~ 248 (422)
...+|..|+.+ |-|+|+.+..++..++.
T Consensus 13 ~~~Lk~rAa~~-GrSle~e~r~iL~~a~~ 40 (77)
T 2bsq_E 13 HNAIKFRARAA-GRSTEAEIRLILDNIAK 40 (77)
T ss_dssp HHHHHHHHHHT-TCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CCCHHHHHHHHHHHHHc
Confidence 35688889999 99999999999888774
No 39
>1f8v_D Mature capsid protein gamma; nodavirus, coat protein, nucleoprotein, protein-RNA interactions, RNA duplex, RNA CAGE, gamma polypeptide; 3.00A {Pariacato virus} SCOP: b.121.4.4
Probab=25.21 E-value=14 Score=22.32 Aligned_cols=14 Identities=43% Similarity=0.508 Sum_probs=1.0
Q ss_pred EEEeccCCCcccee
Q 014554 366 FTISNIVGPTEKIT 379 (422)
Q Consensus 366 ~~~SNvpGp~~~~~ 379 (422)
...||||||..-..
T Consensus 16 ~~aS~iPGPVG~~a 29 (40)
T 1f8v_D 16 GTLSVIPGPVGTIS 29 (40)
T ss_dssp CC------------
T ss_pred HHHhcCCCchhHHH
Confidence 45899999976443
No 40
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=25.01 E-value=24 Score=31.58 Aligned_cols=31 Identities=19% Similarity=0.120 Sum_probs=24.8
Q ss_pred EEEEeecccccccccHHHHHHHhcccCCCCC
Q 014554 119 CAVFRIHHALGDGISLVSMLLAGCRLADDPE 149 (422)
Q Consensus 119 ~l~~~~HH~l~DG~s~~~ll~~l~~~~~~p~ 149 (422)
-|.+.+||-+.||.-+.+|+..+-+...+|.
T Consensus 211 ~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~ 241 (256)
T 3mae_A 211 NLCLSIDHRILDGLLAGKFLQAIKANVEKIS 241 (256)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHHTCC
T ss_pred EEEEEEccccccHHHHHHHHHHHHHHHhChH
Confidence 4789999999999999999887755433554
No 41
>2hue_C Histone H4; mini beta sheet, elongated beta sandwhich, DNA binding prote; 1.70A {Xenopus laevis} SCOP: a.22.1.1 PDB: 3nqj_B 1aoi_B 3kwq_B* 1hio_D 2yfv_B
Probab=21.00 E-value=85 Score=22.51 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=30.1
Q ss_pred eechHHHHHHHHHcCCCc-hhHHHHHHHHHHHHHHHhh
Q 014554 217 TFSIDDMKAVKKAIAGAT-INDVLFGVVSSGLSRYLDH 253 (422)
Q Consensus 217 ~~~l~~vk~ia~~~~g~T-vNdvllaa~a~al~~~~~~ 253 (422)
.+|.+.|+++++.. |++ +++-..-++...+..|+.+
T Consensus 10 ~ip~~~I~Riar~~-Gv~rIs~da~~~l~~~l~~~~~~ 46 (84)
T 2hue_C 10 GITKPAIRRLARRG-GVKRISGLIYEETRGVLKVFLEN 46 (84)
T ss_dssp SSCHHHHHHHHHHT-TCCEECTTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHc-CchhccHHHHHHHHHHHHHHHHH
Confidence 36788999999999 885 8888888888888888765
No 42
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=20.07 E-value=47 Score=29.50 Aligned_cols=22 Identities=14% Similarity=0.193 Sum_probs=0.0
Q ss_pred EEEeecccccccccHHHHHHHh
Q 014554 120 AVFRIHHALGDGISLVSMLLAG 141 (422)
Q Consensus 120 l~~~~HH~l~DG~s~~~ll~~l 141 (422)
+.+.+||-+.||.-+.+|+..+
T Consensus 207 lsLs~DHRviDGa~aa~Fl~~l 228 (250)
T 3l60_A 207 LTCVFDHRVVDGAQVAQFMCEL 228 (250)
T ss_dssp EEEEEETTTCCHHHHHHHHHHH
T ss_pred EEEEecccccCHHHHHHHHHHH
No 43
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=20.00 E-value=3.2e+02 Score=21.43 Aligned_cols=115 Identities=10% Similarity=0.034 Sum_probs=70.6
Q ss_pred EEEEEeechHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHhhhCCC-CCCCCcceEEEEEeeeccCCCchhh----hhhh
Q 014554 212 KLATATFSIDDMKAVKKAIAGATINDVLFGVVSSGLSRYLDHRSPN-ALPEGLRITGLAMVNIRRQPGLQDL----SNLM 286 (422)
Q Consensus 212 ~~~~~~~~l~~vk~ia~~~~g~TvNdvllaa~a~al~~~~~~~~~~-~~p~~~~l~~~vPvslR~~~~~~~~----~~~~ 286 (422)
.+...-+.++.++.+...+ |-..-|-+|..++..|+..+...+.- .+. ...+.+.+|-.-. .+...+ .+.+
T Consensus 44 ~~~l~~i~id~f~~in~~~-G~~~gd~~L~~~a~~L~~~~~~~~~~~R~~-~d~F~ill~~~~~--~~~~~~~~~i~~~~ 119 (177)
T 3hva_A 44 PSTLAYIHLNGYPSLQADH-GLSGIDLLLGQLAGLMREQFGEEADLARFG-DSIFAALFKGKTP--EQAQAALQRLLKKV 119 (177)
T ss_dssp CEEEEEEEETTHHHHHHHH-HHHHHHHHHHHHHHHHHHHHGGGCEEEECS-SSEEEEEEETCCH--HHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCHHHHHHHh-CchhHHHHHHHHHHHHHHhCCCCceEEEec-CCeEEEEeCCCCH--HHHHHHHHHHHHHH
Confidence 3566777888999999999 99999999999999999998764310 011 2467777773210 000000 0011
Q ss_pred ccCCCCCCC-----ceEEEEEeeeeccCCCCCHHHHHHHHHHHHHHHhhccc
Q 014554 287 KSNSGTRWG-----NKFGMLLLPIYYHKGGADPLSYVKRAKKMIDSKKLTLE 333 (422)
Q Consensus 287 ~~~~~~~~g-----N~~s~~~~~Lp~~~~~~dp~~rL~~v~~~~~~~k~~~~ 333 (422)
.. .....+ -.++......|. +..++.+.++.....+...|....
T Consensus 120 ~~-~~~~~~~~~~~~~~siGi~~~~~--~~~~~~~ll~~A~~Al~~ak~~g~ 168 (177)
T 3hva_A 120 EN-HLFELNGRSAQATLSIGVAGLDE--KTAKAQDVMNRAHRCADDAARKGG 168 (177)
T ss_dssp HT-CCEEETTEEECCCEEEEEEEECT--TCCCHHHHHHHHHHHHHHHHTTCS
T ss_pred Hh-CccccCCceeeEEEEEEEEEcCC--CCCCHHHHHHHHHHHHHHHHHhCC
Confidence 00 000111 123333444555 557888999999999998887544
Done!