Your job contains 1 sequence.
>014555
MSSSYLPATTDSIAQAKEASNPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQE
NRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAE
KRTFLRQRVEARLAALLMESREYTEALTLLTSLVKEVRRLDDKLLLVDIDLLESKLHFSL
RNLPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNA
LEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKL
FETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHV
EKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI
MA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014555
(422 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2030017 - symbol:ATS9 "AT1G29150" species:3702... 1554 1.6e-159 1
FB|FBgn0028689 - symbol:Rpn6 "Regulatory particle non-ATP... 909 3.5e-91 1
UNIPROTKB|F6XBL2 - symbol:psmd11 "26S proteasome non-ATPa... 884 1.6e-88 1
MGI|MGI:1916327 - symbol:Psmd11 "proteasome (prosome, mac... 868 7.7e-87 1
ZFIN|ZDB-GENE-030131-2711 - symbol:psmd11a "proteasome (p... 868 7.7e-87 1
UNIPROTKB|Q2KI42 - symbol:PSMD11 "26S proteasome non-ATPa... 867 9.9e-87 1
UNIPROTKB|E2RJ26 - symbol:PSMD11 "Uncharacterized protein... 867 9.9e-87 1
UNIPROTKB|O00231 - symbol:PSMD11 "26S proteasome non-ATPa... 867 9.9e-87 1
RGD|1306450 - symbol:Psmd11 "proteasome (prosome, macropa... 867 9.9e-87 1
ZFIN|ZDB-GENE-030131-984 - symbol:psmd11b "proteasome (pr... 860 5.4e-86 1
UNIPROTKB|F1RKW8 - symbol:PSMD11 "Uncharacterized protein... 859 6.9e-86 1
POMBASE|SPAC23G3.11 - symbol:rpn6 "19S proteasome regulat... 821 7.4e-82 1
DICTYBASE|DDB_G0281315 - symbol:psmD11 "26S proteasome no... 818 1.5e-81 1
ASPGD|ASPL0000014128 - symbol:AN10519 species:162425 "Eme... 804 4.7e-80 1
UNIPROTKB|G4NAA5 - symbol:MGG_03211 "26S proteasome non-A... 782 1.0e-77 1
WB|WBGene00004462 - symbol:rpn-6.1 species:6239 "Caenorha... 772 1.1e-76 1
UNIPROTKB|Q20938 - symbol:rpn-6.1 "Probable 26S proteasom... 772 1.1e-76 1
CGD|CAL0003109 - symbol:RPN6 species:5476 "Candida albica... 703 2.4e-69 1
SGD|S000002255 - symbol:RPN6 "Essential, non-ATPase regul... 617 3.1e-60 1
GENEDB_PFALCIPARUM|PF14_0025 - symbol:PF14_0025 "proteoso... 303 4.4e-26 1
UNIPROTKB|Q8IM66 - symbol:PF14_0025 "Proteosome subunit, ... 303 4.4e-26 1
DICTYBASE|DDB_G0289361 - symbol:csn2 "proteasome componen... 204 1.4e-15 2
UNIPROTKB|E2REA8 - symbol:COPS2 "Uncharacterized protein"... 187 7.7e-12 1
UNIPROTKB|P61201 - symbol:COPS2 "COP9 signalosome complex... 187 7.7e-12 1
MGI|MGI:1330276 - symbol:Cops2 "COP9 (constitutive photom... 187 7.7e-12 1
RGD|628791 - symbol:Cops2 "COP9 signalosome subunit 2" sp... 187 7.7e-12 1
UNIPROTKB|P61203 - symbol:Cops2 "COP9 signalosome complex... 187 7.7e-12 1
ZFIN|ZDB-GENE-040625-15 - symbol:cops2 "COP9 constitutive... 187 7.7e-12 1
UNIPROTKB|G3X736 - symbol:COPS2 "Uncharacterized protein"... 187 8.0e-12 1
FB|FBgn0013746 - symbol:alien "alien" species:7227 "Droso... 175 1.8e-10 1
UNIPROTKB|G5EHS2 - symbol:MGCH7_ch7g1103 "COP9 signalosom... 158 2.0e-08 1
WB|WBGene00000814 - symbol:csn-2 species:6239 "Caenorhabd... 157 2.3e-08 1
UNIPROTKB|O01422 - symbol:csn-2 "COP9 signalosome complex... 157 2.3e-08 1
TAIR|locus:2059289 - symbol:FUS12 "FUSCA 12" species:3702... 155 3.1e-08 1
ASPGD|ASPL0000076227 - symbol:csnB species:162425 "Emeric... 150 5.1e-08 2
UNIPROTKB|F1SQG5 - symbol:COPS2 "Uncharacterized protein"... 148 1.5e-07 1
POMBASE|SPAPB17E12.04c - symbol:csn2 "COP9/signalosome co... 145 4.1e-07 1
UNIPROTKB|F1NPA2 - symbol:PSMD11 "Uncharacterized protein... 117 1.9e-06 1
UNIPROTKB|J3KSW3 - symbol:PSMD11 "26S proteasome non-ATPa... 112 6.7e-06 1
TAIR|locus:2098851 - symbol:FUS6 "FUSCA 6" species:3702 "... 119 0.00032 1
>TAIR|locus:2030017 [details] [associations]
symbol:ATS9 "AT1G29150" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506
GO:GO:0005634 GO:GO:0046686 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0030163 GO:GO:0000502 EMBL:AC021043 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000210093 KO:K03036
OMA:SGILDQG EMBL:AF083890 EMBL:AY230834 EMBL:AY230835 EMBL:AY230836
EMBL:AY230837 EMBL:AF370203 EMBL:AY056311 IPI:IPI00521338
PIR:A86414 PIR:T52033 RefSeq:NP_174210.1 UniGene:At.21249
ProteinModelPortal:Q9LP45 SMR:Q9LP45 IntAct:Q9LP45 STRING:Q9LP45
PRIDE:Q9LP45 EnsemblPlants:AT1G29150.1 GeneID:839789
KEGG:ath:AT1G29150 TAIR:At1g29150 InParanoid:Q9LP45
PhylomeDB:Q9LP45 ProtClustDB:CLSN2679678 Genevestigator:Q9LP45
Uniprot:Q9LP45
Length = 419
Score = 1554 (552.1 bits), Expect = 1.6e-159, P = 1.6e-159
Identities = 317/415 (76%), Positives = 345/415 (83%)
Query: 8 ATTDSIAQAKEASNPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLC 67
ATT++I+ A EA N S+AI++LY+VL+DPSSS EA+R+KE AIT L D L +E R +DL
Sbjct: 6 ATTETISLALEA-NSSEAITILYQVLEDPSSSPEAIRIKEQAITNLCDRLTEEKRGEDLR 64
Query: 68 NLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQ 127
LLT+LRPFFSLIPKAKTAKIVRGIIDAVAKIPGT++LQI LCKEMV+WTRAEKRTFLRQ
Sbjct: 65 KLLTKLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTTDLQITLCKEMVEWTRAEKRTFLRQ 124
Query: 128 RVEARLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXX 187
RVEARLAALLME++EY EAL LL++LVK HFSLR
Sbjct: 125 RVEARLAALLMENKEYVEALALLSTLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAK 184
Query: 188 XXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAV 247
IYVPPAQQGTIDLQSGILHAEEKDYKT YSY NAL DPRAV
Sbjct: 185 AALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFESFNALGDPRAV 244
Query: 248 FSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRD 307
FSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGP+LDAMKAVADAHSKRSLKLFE ALRD
Sbjct: 245 FSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFENALRD 304
Query: 308 FKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQM 367
+KAQLE+DPIVHRHLSSLYDTLLEQNLCRLIEP+SRVEIAHIAELI LP+DHVEKKLSQM
Sbjct: 305 YKAQLEDDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIGLPLDHVEKKLSQM 364
Query: 368 ILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKIMA 422
ILDKKFAGTLDQG GCLIIFEDPKADAIY ATLETI+NMGKVVDSL+VRSAKIM+
Sbjct: 365 ILDKKFAGTLDQGAGCLIIFEDPKADAIYSATLETIANMGKVVDSLYVRSAKIMS 419
>FB|FBgn0028689 [details] [associations]
symbol:Rpn6 "Regulatory particle non-ATPase 6" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 EMBL:AE013599 GO:GO:0005875 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175
Gene3D:1.25.40.10 GO:GO:0008541 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG EMBL:AF145309
EMBL:AF160939 EMBL:BT089015 RefSeq:NP_001246325.1
RefSeq:NP_477474.1 RefSeq:NP_725412.2 UniGene:Dm.3085 PDB:3TXM
PDB:3TXN PDBsum:3TXM PDBsum:3TXN ProteinModelPortal:Q7KLV9
SMR:Q7KLV9 IntAct:Q7KLV9 STRING:Q7KLV9 PRIDE:Q7KLV9
EnsemblMetazoa:FBtr0087475 EnsemblMetazoa:FBtr0306558 GeneID:36638
KEGG:dme:Dmel_CG10149 UCSC:CG10149-RB CTD:36638 FlyBase:FBgn0028689
InParanoid:Q7KLV9 GenomeRNAi:36638 NextBio:799626 Bgee:Q7KLV9
Uniprot:Q7KLV9
Length = 422
Score = 909 (325.0 bits), Expect = 3.5e-91, P = 3.5e-91
Identities = 182/421 (43%), Positives = 262/421 (62%)
Query: 1 MSSSYLPATTDSIAQAKEASNPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQE 60
M+ + L +++ S ++ L R + + E +R+KE I + +L +QE
Sbjct: 1 MAGATLFERAQALSSVNREEQDSSLLNKLVRDQEGAENDEERIRIKEQGILQQGELYKQE 60
Query: 61 NRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAE 120
+A++L +L+ RPF S I KAK AK+VR ++D + + +++ LCK+ ++W + E
Sbjct: 61 GKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIEWAKQE 120
Query: 121 KRTFLRQRVEARLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSL 180
KRTFLRQ +EARL AL ++ YTEAL L L++ + +L
Sbjct: 121 KRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHAL 180
Query: 181 RXXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXN 239
IY PP QG +DLQSGILHA +E+D+KTA+SY +
Sbjct: 181 SNLPKARAALTSARTTANAIYCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFD 240
Query: 240 ALEDPRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLK 299
+++ +A+ SLKYMLLCKIM+ Q+DDV ++S K + Y G ++DAMK+VA+A KRSL
Sbjct: 241 SVDSVKALTSLKYMLLCKIMLGQSDDVNQLVSGKLAITYSGRDIDAMKSVAEASHKRSLA 300
Query: 300 LFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDH 359
F+ AL+++K +L ED IV HL +LYDT+LEQNLCR+IEPYSRV++AH+AE I+LP+
Sbjct: 301 DFQAALKEYKKELAEDVIVQAHLGTLYDTMLEQNLCRIIEPYSRVQVAHVAESIQLPMPQ 360
Query: 360 VEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAK 419
VEKKLSQMILDKKF+G LDQG G LI+FE+ D Y LETI +MGKVVD+L+ ++ K
Sbjct: 361 VEKKLSQMILDKKFSGILDQGEGVLIVFEETPVDKTYERVLETIQSMGKVVDTLYQKAKK 420
Query: 420 I 420
+
Sbjct: 421 L 421
>UNIPROTKB|F6XBL2 [details] [associations]
symbol:psmd11 "26S proteasome non-ATPase regulatory subunit
11" species:8364 "Xenopus (Silurana) tropicalis" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0043248 "proteasome assembly" evidence=ISS] [GO:0048863 "stem
cell differentiation" evidence=ISS] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 KO:K03036 EMBL:AAMC01047365
RefSeq:XP_002935612.1 GeneID:100492225 KEGG:xtr:100492225
Xenbase:XB-GENE-922608 Bgee:F6XBL2 Uniprot:F6XBL2
Length = 422
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 184/410 (44%), Positives = 254/410 (61%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ S+ + +I +L ++ D S EALRVKE +I EL LL + +A +L LL
Sbjct: 12 AQEMLVSDRAASIDILQSIVKRDIQESDEEALRVKEQSILELGGLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W +AEKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKAEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALQLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q +D+QSGI+HA EEKD+KTAYSY ++++ P+A+ +L
Sbjct: 192 SARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAFEGNDSIDSPKAITAL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D+KA
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLANFEKALTDYKA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+LP VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIDHISSLIKLPKPEVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>MGI|MGI:1916327 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0022624 "proteasome accessory complex"
evidence=ISO;IDA] [GO:0043248 "proteasome assembly" evidence=ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1916327 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AK051738 EMBL:AK089942
IPI:IPI00222515 RefSeq:NP_848731.2 UniGene:Mm.260539
ProteinModelPortal:Q8BG32 SMR:Q8BG32 IntAct:Q8BG32 STRING:Q8BG32
PhosphoSite:Q8BG32 PaxDb:Q8BG32 PRIDE:Q8BG32
Ensembl:ENSMUST00000017572 Ensembl:ENSMUST00000173938 GeneID:69077
KEGG:mmu:69077 InParanoid:Q8BG32 NextBio:328550 Bgee:Q8BG32
Genevestigator:Q8BG32 GermOnline:ENSMUSG00000017428 Uniprot:Q8BG32
Length = 422
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 179/410 (43%), Positives = 256/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL
Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SL
Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYSKAKKL 421
>ZFIN|ZDB-GENE-030131-2711 [details] [associations]
symbol:psmd11a "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11a" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0022624
"proteasome accessory complex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0043248
"proteasome assembly" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-2711 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:BC124767 EMBL:BX890565 IPI:IPI00613161 RefSeq:NP_001159710.1
UniGene:Dr.76962 PRIDE:F6P3G4 Ensembl:ENSDART00000084448
GeneID:503934 KEGG:dre:503934 CTD:503934 NextBio:20866384
ArrayExpress:F6P3G4 Bgee:F6P3G4 Uniprot:F6P3G4
Length = 421
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 179/410 (43%), Positives = 257/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ + +I +L+ ++ D EA+RVKE +I EL LL + +A +L LL
Sbjct: 11 AQSLLSTDRNASIDILHAIVKRDVQDDDEEAVRVKEQSILELGGLLAKTGQAAELGGLLK 70
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 71 YVRPFLNSISKAKAARLVRSLLDMFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 130
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 131 RLVSLYFDTKRYQEALQLGSQLLQELKKMDDKALLVELQLLESKTYHALSNLPKARAALT 190
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q +D+QSGI+HA EEKD+KTAYSY ++++ PRA+ +L
Sbjct: 191 SARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPRAITAL 250
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV +IS K L+Y G + +A+K VA A RSL FE AL ++KA
Sbjct: 251 KYMLLCKIMLNSPEDVQSLISGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTEYKA 310
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ELI+L VE+KLSQMILD
Sbjct: 311 ELRDDPIISTHLTKLYDNLLEQNLIRVIEPFSRVQIEHISELIKLSKGDVERKLSQMILD 370
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
+KF G LDQG G LI+F++P D Y A+LETI NM KVVDSL+ ++ K+
Sbjct: 371 QKFHGILDQGEGVLIVFDEPPVDKTYEASLETIQNMSKVVDSLYNKAKKL 420
>UNIPROTKB|Q2KI42 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0048863 "stem cell differentiation"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0005829 "cytosol" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 GeneTree:ENSGT00530000063301
GO:GO:0022624 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG
EMBL:BT029888 EMBL:DAAA02048509 EMBL:DAAA02048510 EMBL:BC112777
IPI:IPI00716714 RefSeq:NP_001039613.1 UniGene:Bt.2394
ProteinModelPortal:Q2KI42 SMR:Q2KI42 STRING:Q2KI42 PRIDE:Q2KI42
Ensembl:ENSBTAT00000025152 Ensembl:ENSBTAT00000054679 GeneID:513461
KEGG:bta:513461 CTD:5717 HOVERGEN:HBG053738 InParanoid:Q2KI42
OrthoDB:EOG41RPV3 NextBio:20870863 ArrayExpress:Q2KI42
Uniprot:Q2KI42
Length = 422
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 179/410 (43%), Positives = 256/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL
Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SL
Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>UNIPROTKB|E2RJ26 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048863 "stem cell differentiation"
evidence=IEA] [GO:0043248 "proteasome assembly" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00530000063301 KO:K03036 OMA:SGILDQG CTD:5717
EMBL:AAEX03006642 RefSeq:XP_537730.2 ProteinModelPortal:E2RJ26
Ensembl:ENSCAFT00000029207 GeneID:480610 KEGG:cfa:480610
Uniprot:E2RJ26
Length = 422
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 179/410 (43%), Positives = 256/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL
Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SL
Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>UNIPROTKB|O00231 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0048863 "stem cell differentiation" evidence=IMP]
[GO:0043248 "proteasome assembly" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0044281 GO:GO:0000082 GO:GO:0048863
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0051436 GO:GO:0043248 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 EMBL:CH471147
GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GO:GO:0022624 KO:K03036 OMA:SGILDQG CTD:5717
HOVERGEN:HBG053738 OrthoDB:EOG41RPV3 EMBL:AF001212 EMBL:AB003102
EMBL:AK290602 EMBL:AK223196 EMBL:BC000437 EMBL:BC004430
IPI:IPI00105598 PIR:JC6524 RefSeq:NP_001257411.1 RefSeq:NP_002806.2
UniGene:Hs.443379 ProteinModelPortal:O00231 SMR:O00231
IntAct:O00231 MINT:MINT-1154929 STRING:O00231 PhosphoSite:O00231
OGP:O00231 PaxDb:O00231 PRIDE:O00231 Ensembl:ENST00000261712
Ensembl:ENST00000457654 GeneID:5717 KEGG:hsa:5717 UCSC:uc002hhm.3
GeneCards:GC17P030771 HGNC:HGNC:9556 HPA:HPA042275 MIM:604449
neXtProt:NX_O00231 PharmGKB:PA33902 InParanoid:O00231
PhylomeDB:O00231 GenomeRNAi:5717 NextBio:22212 ArrayExpress:O00231
Bgee:O00231 CleanEx:HS_PSMD11 Genevestigator:O00231
GermOnline:ENSG00000108671 Uniprot:O00231
Length = 422
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 179/410 (43%), Positives = 256/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL
Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SL
Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>RGD|1306450 [details] [associations]
symbol:Psmd11 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 11" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISO;ISS] [GO:0043248 "proteasome assembly"
evidence=ISO;ISS] [GO:0048863 "stem cell differentiation"
evidence=ISO;ISS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 RGD:1306450 GO:GO:0005829 GO:GO:0005634
GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 OMA:SGILDQG IPI:IPI00765842
ProteinModelPortal:F1LMZ8 PRIDE:F1LMZ8 ArrayExpress:F1LMZ8
Uniprot:F1LMZ8
Length = 422
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 179/410 (43%), Positives = 256/410 (62%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ +I +L+ ++ D + EA++VKE +I EL LL + +A +L LL
Sbjct: 12 AQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF + I KAK A++VR ++D + + ++ LC E ++W ++EKRTFLRQ +EA
Sbjct: 72 YVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q T+D+QSGI+HA EEKD+KTAYSY ++++ P+A+ SL
Sbjct: 192 SARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM++ +DV ++S K L+Y G + +A+K VA A RSL FE AL D++A
Sbjct: 252 KYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRA 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI+ HL+ LYD LLEQNL R+IEP+SRV+I HI+ LI+L VE+KLSQMILD
Sbjct: 312 ELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG G LIIF++P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>ZFIN|ZDB-GENE-030131-984 [details] [associations]
symbol:psmd11b "proteasome (prosome, macropain)
216S subunit, non-ATPase, 11b" species:7955 "Danio rerio"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0043248 "proteasome assembly" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0048863 "stem cell differentiation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 ZFIN:ZDB-GENE-030131-984 GO:GO:0005829
GO:GO:0005634 GO:GO:0048863 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0006511 InterPro:IPR013143
SMART:SM00753 GeneTree:ENSGT00530000063301 GO:GO:0022624 KO:K03036
EMBL:CR391936 EMBL:BC051618 EMBL:BC063978 IPI:IPI00507762
RefSeq:NP_955886.1 UniGene:Dr.30259 Ensembl:ENSDART00000016283
GeneID:322265 KEGG:dre:322265 CTD:322265 NextBio:20807740
ArrayExpress:F1QGH9 Bgee:F1QGH9 Uniprot:F1QGH9
Length = 422
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 181/410 (44%), Positives = 253/410 (61%)
Query: 14 AQAKEASNPSDAISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
AQ+ +++ + +I + + ++ D EA+RVKE +I EL LL + +A +L LL
Sbjct: 12 AQSLISTDRNASIDIFHSIVRRDVQEDDEEAVRVKEQSILELGSLLAKTGQAAELGGLLK 71
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPF I KAK A++VR ++D + + ++ LC E ++W +AEKRTFLRQ +EA
Sbjct: 72 FVRPFLISISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKAEKRTFLRQALEA 131
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
RL +L +++ Y EAL L + L++ + +L
Sbjct: 132 RLISLYFDTKRYQEALQLESQLLQELKKMDDKALLVEVQLLESKTYHALSNLPKARAALT 191
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSL 250
IY PP Q +D+QSGI+HA EEKD+KTAYSY ++++ PRAV +L
Sbjct: 192 SARTTANAIYCPPKLQAALDMQSGIIHAAEEKDWKTAYSYFFEAFEGYDSIDSPRAVTAL 251
Query: 251 KYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKA 310
KYMLLCKIM+S ++V +IS K GL+Y G + DA+K +A A RSL FE AL ++
Sbjct: 252 KYMLLCKIMLSLPEEVQALISGKLGLRYAGRQTDALKCIAQASKNRSLADFEKALTEYTK 311
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
+L +DPI++ HL+ LYD LLEQNL R+IEP+SRV+I HIA LI+L + VE+KLSQMILD
Sbjct: 312 ELRDDPIINTHLAKLYDNLLEQNLIRVIEPFSRVQITHIAGLIKLSKNDVERKLSQMILD 371
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KKF G LDQG LIIFE+P D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 372 KKFHGILDQGEDVLIIFEEPPVDKTYEAALETIQNMSKVVDSLYNKAKKL 421
>UNIPROTKB|F1RKW8 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
InterPro:IPR013143 SMART:SM00753 GeneTree:ENSGT00530000063301
OMA:SGILDQG EMBL:CU463935 EMBL:CU695029 Ensembl:ENSSSCT00000019298
Uniprot:F1RKW8
Length = 392
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 175/388 (45%), Positives = 243/388 (62%)
Query: 34 DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGII 93
D + EA++VKE +I EL LL + +A +L LL +RPF + I KAK A++VR ++
Sbjct: 4 DIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLL 63
Query: 94 DAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSL 153
D + + ++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y EAL L + L
Sbjct: 64 DLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQL 123
Query: 154 VKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQ 213
++ + +L IY PP Q T+D+Q
Sbjct: 124 LRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQ 183
Query: 214 SGILHA-EEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIISS 272
SGI+HA EEKD+KTAYSY ++++ P+A+ SLKYMLLCKIM++ +DV ++S
Sbjct: 184 SGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSG 243
Query: 273 KAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQ 332
K L+Y G + +A+K VA A RSL FE AL D++A+L +DPI+ HL+ LYD LLEQ
Sbjct: 244 KLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQ 303
Query: 333 NLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKA 392
NL R+IEP+SRV+I HI+ LI+L VE+KLSQMILDKKF G LDQG G LIIF++P
Sbjct: 304 NLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPV 363
Query: 393 DAIYPATLETISNMGKVVDSLFVRSAKI 420
D Y A LETI NM KVVDSL+ ++ K+
Sbjct: 364 DKTYEAALETIQNMSKVVDSLYNKAKKL 391
>POMBASE|SPAC23G3.11 [details] [associations]
symbol:rpn6 "19S proteasome regulatory subunit Rpn6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 PomBase:SPAC23G3.11 GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0006511 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GO:GO:0008540 HOGENOM:HOG000210093 KO:K03036 OMA:SGILDQG PIR:T50185
RefSeq:NP_593111.1 ProteinModelPortal:Q9P7S2 IntAct:Q9P7S2
STRING:Q9P7S2 PRIDE:Q9P7S2 EnsemblFungi:SPAC23G3.11.1
GeneID:2541807 KEGG:spo:SPAC23G3.11 OrthoDB:EOG4K3Q51
NextBio:20802895 Uniprot:Q9P7S2
Length = 421
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 176/419 (42%), Positives = 247/419 (58%)
Query: 8 ATTDSIAQAKEASNPSD---AISMLYRVLDDPSSSSEAL-RVKELAITELSDLLRQENRA 63
++ S+ A A +D AI + VL+ S E + +E A+T LSDL +ENR
Sbjct: 2 SSKSSLELANNAVKSNDIEKAIDLYKEVLNKGVSKDEKVANEQEQALTNLSDLYVRENRH 61
Query: 64 QDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRT 123
DL L+ Q RP + KAK+AKIVR +ID + + LQI + + ++W EKRT
Sbjct: 62 NDLAQLVQQSRPLMANFSKAKSAKIVRTLIDKFSGEKKSLPLQIEVANDCIKWAIKEKRT 121
Query: 124 FLRQRVEARLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXX 183
FLRQ +E +L +L ++ YT+A+ L+ +L+ + ++R
Sbjct: 122 FLRQALETKLISLYYDNSSYTDAINLINTLLSELKRMDDKMLLTEVHLLESKVYHAIRNI 181
Query: 184 XXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALED 243
+Y PP QG +DLQSGILHA++ D+KTAYSY +L+D
Sbjct: 182 PKARASLTAAKTSANAVYCPPMLQGNLDLQSGILHADDMDFKTAYSYFYEAYEGFTSLDD 241
Query: 244 PR-AVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFE 302
+ A+ SLKYMLL +IM++ +V +++ K ++Y G +++AM+A+A AH RSL FE
Sbjct: 242 DKKALSSLKYMLLSQIMLNSVSEVKSLLTGKHAIRYAGRDIEAMRAIAQAHENRSLADFE 301
Query: 303 TALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEK 362
AL+D+K +L DPI+ HLSSLYD LLEQNL R++EP+SRVE++HIAELI L VE
Sbjct: 302 KALQDYKPELASDPIIRSHLSSLYDNLLEQNLLRVVEPFSRVEVSHIAELIGLSTVQVEG 361
Query: 363 KLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKIM 421
KLSQMILDK F G LDQG GCLI++++P+ D Y A LE I NMG VVD L A +
Sbjct: 362 KLSQMILDKIFYGILDQGSGCLIVYDEPQQDKTYEAALEVIKNMGTVVDLLIENKASAL 420
>DICTYBASE|DDB_G0281315 [details] [associations]
symbol:psmD11 "26S proteasome non-ATPase regulatory
subunit 11" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0281315 GenomeReviews:CM000152_GR
EMBL:AAFI02000040 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006972 GO:GO:0004175 Gene3D:1.25.40.10 GO:GO:0006511
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159 GO:GO:0005838
KO:K03036 OMA:SGILDQG RefSeq:XP_640861.1 STRING:Q54UB5 PRIDE:Q54UB5
EnsemblProtists:DDB0232994 GeneID:8622917 KEGG:ddi:DDB_G0281315
ProtClustDB:CLSZ2729047 Uniprot:Q54UB5
Length = 413
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 173/410 (42%), Positives = 243/410 (59%)
Query: 15 QAKEASNPSD---AISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
Q +E N D AI ++L S + +KE AI L+ L + + L LL
Sbjct: 6 QLEEIGNCQDSNKAIQDYNKILTIQESPDD---IKEEAILRLAKLFVKIGKGDQLPTLLR 62
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEA 131
+RPFF I K KT KIVR ID + +P I KE +QW + R +LRQR+E
Sbjct: 63 SVRPFFDKISKPKTDKIVRNFIDIFSTVPDNLTTLIEFVKENIQWCKDTNRIYLRQRLET 122
Query: 132 RLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXX 191
+L L+ E+++Y AL+ LT+L+ +L+
Sbjct: 123 KLFTLMFEAKDYANALSGLTTLLTEIKRLDDKPLLVEIQLVESRIQHALKNIPKARAALT 182
Query: 192 XXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLK 251
IY PP Q ID+QSGILH+EEKDYKTA+SY ++LEDP A+ +LK
Sbjct: 183 SARTNANTIYCPPKLQAEIDMQSGILHSEEKDYKTAFSYFFESYETYDSLEDPFAMKALK 242
Query: 252 YMLLCKIMVSQADDVAGIISSKAGLQYVGPE-LDAMKAVADAHSKRSLKLFETALRDFKA 310
YMLLCKIM +Q DDV +++ K GL+Y ++A+ ++ +H+KRSL +F+ ++F
Sbjct: 243 YMLLCKIMTNQTDDVHALVNGKIGLKYHNNRSIEAITQISKSHAKRSLHMFQEVTKEFSD 302
Query: 311 QLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILD 370
QL +DPI+H HL+ LY LLEQNLCR+IEP+SRVEI+HIA+LI+LP+D VE+KLS MILD
Sbjct: 303 QLSDDPIIHSHLTELYSNLLEQNLCRIIEPFSRVEISHIAKLIDLPVDVVERKLSLMILD 362
Query: 371 KKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
KK+ G LDQG G LI+FE+ K D ++ +LETI + +VVD L+ ++ K+
Sbjct: 363 KKYNGILDQGTGTLIVFEEQKEDKLFNCSLETIGALSRVVDLLYEKTNKL 412
>ASPGD|ASPL0000014128 [details] [associations]
symbol:AN10519 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BN001302 Gene3D:1.25.40.10 GO:GO:0000502
InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000210093 OMA:SGILDQG
EnsemblFungi:CADANIAT00004435 Uniprot:C8V4A5
Length = 424
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 163/407 (40%), Positives = 242/407 (59%)
Query: 14 AQAKEASNPSDAISMLYRVL-DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQ 72
A+A + S A S+ VL P S+ + R E A+ L +L R E + Q++ L+
Sbjct: 14 ARALAKKDASQAASIYKEVLAQGPGSTESSSRDYENALVGLGELYRDEKKPQEIAELIKT 73
Query: 73 LRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEKRTFLRQRVEAR 132
R FS KAKTAK+VR ++D ++IP T ++QIA+ + ++W AE+R+FLRQ +E R
Sbjct: 74 SRDSFSSFAKAKTAKLVRQLLDLFSEIPNTLDIQIAVIRSCIEWAVAERRSFLRQNLETR 133
Query: 133 LAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXX 192
L A+ M+ + Y +AL L+ SL++ + +L
Sbjct: 134 LVAIFMQKQSYYDALNLINSLLRELKRLDDKLMLVEVQLLESRVYHALGNQAKARAALTA 193
Query: 193 XXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALED-PRAVFSLK 251
+Y PP Q +D+QSG+LHAE+KD+ T+YSY ++L++ +A +L+
Sbjct: 194 ARTSAASVYTPPNLQAGLDMQSGMLHAEDKDFNTSYSYFIEALEGYSSLDEGEKATAALQ 253
Query: 252 YMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQ 311
YMLLCKIM++ DDV ++ SK +Y P L+AMKAVA AH+ RSL+ +E AL D++ +
Sbjct: 254 YMLLCKIMLNLVDDVTTLLGSKQAQKYASPRLEAMKAVARAHANRSLEEYEKALSDYRFE 313
Query: 312 LEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDK 371
L D + HL LYD +LEQNL ++IEP+SRVE+ HIA+++ L VE+KLSQMILDK
Sbjct: 314 LGSDAFIRNHLRRLYDAMLEQNLIKVIEPFSRVELDHIAKMVGLDTQQVERKLSQMILDK 373
Query: 372 KFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSA 418
G LDQG GCLI++++ + D Y A LETI+ + VV+SL+ A
Sbjct: 374 VIIGVLDQGAGCLIVYDETERDQAYDAALETIARLSNVVESLYTNQA 420
>UNIPROTKB|G4NAA5 [details] [associations]
symbol:MGG_03211 "26S proteasome non-ATPase regulatory
subunit 11" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0000502 EMBL:CM001234 InterPro:IPR013143
SMART:SM00753 KO:K03036 RefSeq:XP_003716769.1
EnsemblFungi:MGG_03211T0 GeneID:2676755 KEGG:mgr:MGG_03211
Uniprot:G4NAA5
Length = 423
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 167/421 (39%), Positives = 242/421 (57%)
Query: 8 ATTDS--IAQAKEA--SNPSDAISMLYRVLDDPSS--SSEALRVKELAITELSDLLRQEN 61
A DS + +A+EA SNP A + ++ P S S A++ ELA+ L +L R +
Sbjct: 2 AAGDSQRLREAQEAAKSNPKKAEELYKEIVSKPPSVTSDAAVKEYELALLSLGELYRDQK 61
Query: 62 RAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKEMVQWTRAEK 121
+ DL L+ + R S KAKTAK+VR ++D IP T++LQ+++ K ++W +E+
Sbjct: 62 NSNDLVELIKRSRTVLSSFAKAKTAKLVRQLLDFFDGIPNTTDLQVSVTKSCIEWATSER 121
Query: 122 RTFLRQRVEARLAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLR 181
RTFLRQ +E RL L M + Y EALTL+ L+K + +L
Sbjct: 122 RTFLRQNLETRLVTLHMAKQSYYEALTLINGLLKELKRLDDKLMLVEVQLLESRVYHALG 181
Query: 182 XXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNAL 241
+Y PP Q +D+QSG+LHAE+KD+ TA+SY ++
Sbjct: 182 NISKARAALTSARTSAASVYTPPMLQANLDMQSGMLHAEDKDFNTAFSYFIEALDGYHSQ 241
Query: 242 EDPR-AVFSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKL 300
+ + A +L+YMLLCKIM++ DDV +++SK +Y G L+AMKA+A AH+ RSL+
Sbjct: 242 DATKNATAALQYMLLCKIMLNLVDDVNTLMASKQAAKYAGQSLEAMKAIARAHANRSLEE 301
Query: 301 FETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHV 360
+E +L ++ +L D V HL LYD +LEQNL ++IEP+SRVEI HIA+++ L V
Sbjct: 302 YEQSLAAYRHELGGDAFVRSHLRRLYDAMLEQNLIKVIEPFSRVEIDHIAKMVGLDTQQV 361
Query: 361 EKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
E+KLSQMILDK G LDQG GCLIIF++ + D Y L TI + VVD L+ A +
Sbjct: 362 ERKLSQMILDKVIIGVLDQGAGCLIIFDETQRDEAYDHALATIEKLSSVVDVLYTNQASM 421
Query: 421 M 421
+
Sbjct: 422 L 422
>WB|WBGene00004462 [details] [associations]
symbol:rpn-6.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006915
GO:GO:0006950 GO:GO:0002119 GO:GO:0000003 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0043248 GO:GO:0006511 EMBL:FO081266
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GeneTree:ENSGT00530000063301 GO:GO:0022624 PIR:H88493
RefSeq:NP_001022621.1 RefSeq:NP_001022622.1
ProteinModelPortal:Q20938 SMR:Q20938 STRING:Q20938 PaxDb:Q20938
PRIDE:Q20938 EnsemblMetazoa:F57B9.10a GeneID:175972
KEGG:cel:CELE_F57B9.10 UCSC:F57B9.10a CTD:175972 WormBase:F57B9.10a
WormBase:F57B9.10b HOGENOM:HOG000210093 InParanoid:Q20938 KO:K03036
OMA:SGILDQG NextBio:890556 Uniprot:Q20938
Length = 438
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 162/403 (40%), Positives = 240/403 (59%)
Query: 21 NPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLI 80
N + I L ++ P+S + ++ KE +I EL ++L Q + ++L N++ Q RPF +
Sbjct: 35 NDQNVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSL 94
Query: 81 PKAKTAKIVRGIIDAVAKIPGTS-ELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLME 139
KAK AK+VR ++D KI ++++ L KE +QW + RTFLRQ + ARL L +
Sbjct: 95 GKAKAAKLVRDLVDLCLKIDDQDGDIKVGLVKECIQWATEQNRTFLRQTLTARLVRLYND 154
Query: 140 SREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXX 199
+ YT+AL L L++ +++L
Sbjct: 155 LQRYTQALPLAADLIRELKKVDDKDVLVEVELEESKAYYNLSNIGRARASLTGARTTANA 214
Query: 200 IYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDP-RAVFSLKYMLLCK 257
IYV P Q +DLQSGILHA +EKD+KTA+SY +++++ A+ +LKYMLLCK
Sbjct: 215 IYVNPRMQAALDLQSGILHAADEKDFKTAFSYFYEAFEGYDSVDEKVSALTALKYMLLCK 274
Query: 258 IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPI 317
+M+ D+V ++S+K L+Y G +LDAMKA+A A KRSLK F+ A F +L+ DP+
Sbjct: 275 VMLDLPDEVNSLLSAKLALKYNGSDLDAMKAIAAAAQKRSLKDFQVAFGSFPQELQMDPV 334
Query: 318 VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTL 377
V +H SL + +LE++LCR+IEPYS V+I H+A+ I + VEKKLSQMILD+K +G+L
Sbjct: 335 VRKHFHSLSERMLEKDLCRIIEPYSFVQIEHVAQQIGIDRSKVEKKLSQMILDQKLSGSL 394
Query: 378 DQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
DQG G LI+FE D Y L+TI MG+VVD+L+ ++KI
Sbjct: 395 DQGEGMLIVFEIAVPDEAYQTALDTIHAMGEVVDALYSNASKI 437
>UNIPROTKB|Q20938 [details] [associations]
symbol:rpn-6.1 "Probable 26S proteasome regulatory subunit
rpn-6.1" species:6239 "Caenorhabditis elegans" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IDA] [GO:0006950
"response to stress" evidence=IDA] [GO:0022624 "proteasome
accessory complex" evidence=TAS] [GO:0008340 "determination of
adult lifespan" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005634 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0006950 GO:GO:0002119 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043248 GO:GO:0006511
EMBL:FO081266 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
GeneTree:ENSGT00530000063301 GO:GO:0022624 PIR:H88493
RefSeq:NP_001022621.1 RefSeq:NP_001022622.1
ProteinModelPortal:Q20938 SMR:Q20938 STRING:Q20938 PaxDb:Q20938
PRIDE:Q20938 EnsemblMetazoa:F57B9.10a GeneID:175972
KEGG:cel:CELE_F57B9.10 UCSC:F57B9.10a CTD:175972 WormBase:F57B9.10a
WormBase:F57B9.10b HOGENOM:HOG000210093 InParanoid:Q20938 KO:K03036
OMA:SGILDQG NextBio:890556 Uniprot:Q20938
Length = 438
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 162/403 (40%), Positives = 240/403 (59%)
Query: 21 NPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLI 80
N + I L ++ P+S + ++ KE +I EL ++L Q + ++L N++ Q RPF +
Sbjct: 35 NDQNVIRHLTNLVKSPASGDDDIKKKEDSIMELGNILAQNKQTEELRNMIEQTRPFLVSL 94
Query: 81 PKAKTAKIVRGIIDAVAKIPGTS-ELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLME 139
KAK AK+VR ++D KI ++++ L KE +QW + RTFLRQ + ARL L +
Sbjct: 95 GKAKAAKLVRDLVDLCLKIDDQDGDIKVGLVKECIQWATEQNRTFLRQTLTARLVRLYND 154
Query: 140 SREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXX 199
+ YT+AL L L++ +++L
Sbjct: 155 LQRYTQALPLAADLIRELKKVDDKDVLVEVELEESKAYYNLSNIGRARASLTGARTTANA 214
Query: 200 IYVPPAQQGTIDLQSGILHA-EEKDYKTAYSYXXXXXXXXNALEDP-RAVFSLKYMLLCK 257
IYV P Q +DLQSGILHA +EKD+KTA+SY +++++ A+ +LKYMLLCK
Sbjct: 215 IYVNPRMQAALDLQSGILHAADEKDFKTAFSYFYEAFEGYDSVDEKVSALTALKYMLLCK 274
Query: 258 IMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPI 317
+M+ D+V ++S+K L+Y G +LDAMKA+A A KRSLK F+ A F +L+ DP+
Sbjct: 275 VMLDLPDEVNSLLSAKLALKYNGSDLDAMKAIAAAAQKRSLKDFQVAFGSFPQELQMDPV 334
Query: 318 VHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTL 377
V +H SL + +LE++LCR+IEPYS V+I H+A+ I + VEKKLSQMILD+K +G+L
Sbjct: 335 VRKHFHSLSERMLEKDLCRIIEPYSFVQIEHVAQQIGIDRSKVEKKLSQMILDQKLSGSL 394
Query: 378 DQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
DQG G LI+FE D Y L+TI MG+VVD+L+ ++KI
Sbjct: 395 DQGEGMLIVFEIAVPDEAYQTALDTIHAMGEVVDALYSNASKI 437
>CGD|CAL0003109 [details] [associations]
symbol:RPN6 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 CGD:CAL0003109 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 InterPro:IPR013143
SMART:SM00753 EMBL:AACQ01000138 KO:K03036 RefSeq:XP_709940.1
ProteinModelPortal:Q59TR9 STRING:Q59TR9 GeneID:3645352
KEGG:cal:CaO19.1299 Uniprot:Q59TR9
Length = 435
Score = 703 (252.5 bits), Expect = 2.4e-69, P = 2.4e-69
Identities = 150/408 (36%), Positives = 235/408 (57%)
Query: 17 KEASNPSDAISMLYRVLDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPF 76
K+ NPS++ + +++++ L+ +E AI EL + N L +L+ R
Sbjct: 27 KQIINPSESSTSTTTTTTTTTTTAKQLQQQESAILELGKIYETLNEPTKLSDLIADSRSI 86
Query: 77 FSLIPKAKTAKIVRGIIDAVAKIPGTSE----LQIALCKEMVQWTRAEKRTFLRQRVEAR 132
K+KTAKIV+ +I+ K+ E +QI + K +QW K +FLRQ ++ +
Sbjct: 87 LGNFAKSKTAKIVKTLIEDFDKLSAKDEKSLDIQIDVTKSSMQWAIESKLSFLRQSLQLK 146
Query: 133 LAALLMESREYTEALTLLTSLVKXXXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXX 192
L+ LL + + + EA+ ++ L++ + +LR
Sbjct: 147 LSDLLYQKKHHHEAIKIINELLREYKKLDDKSSLVEVQLLESKIYHALRNIPKAKAALTS 206
Query: 193 XXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKY 252
IY P Q +D QSGIL++E+KDYKTA+SY N+ +DPR++ LKY
Sbjct: 207 ARTSANSIYCPTILQAELDCQSGILNSEDKDYKTAFSYFYESFEGFNSQDDPRSIIVLKY 266
Query: 253 MLLCKIMVSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQL 312
MLL KIM++ DDV I+++K ++Y ++DAMK++A A+S RSLK FE +L + +L
Sbjct: 267 MLLTKIMLNLIDDVNNILNNKNVIKYKSKDIDAMKSIAMAYSNRSLKEFENSLLTYANEL 326
Query: 313 EEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKK 372
+ D I+ H ++LYD LLEQNL ++IE YS VE++HI+++I L + VE KLSQMILDK
Sbjct: 327 KSDAIIKNHFNALYDNLLEQNLLKIIESYSCVELSHISKVIGLNLQQVEGKLSQMILDKV 386
Query: 373 FAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRSAKI 420
F G LDQG G LII+++P+ DA Y A+LE + N+ VVD L+ +++ +
Sbjct: 387 FYGVLDQGNGWLIIYDEPRKDAAYEASLELVKNLSNVVDLLYEKASSL 434
>SGD|S000002255 [details] [associations]
symbol:RPN6 "Essential, non-ATPase regulatory subunit of the
26S proteasome lid" species:4932 "Saccharomyces cerevisiae"
[GO:0005198 "structural molecule activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0043248
"proteasome assembly" evidence=IMP] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0034515 "proteasome storage granule" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
SGD:S000002255 GO:GO:0005198 EMBL:BK006938 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0043248 GO:GO:0008541
GO:GO:0006511 EMBL:X95644 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 GeneTree:ENSGT00530000063301 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000210093 KO:K03036 OrthoDB:EOG4K3Q51
EMBL:Z74145 PIR:S67639 RefSeq:NP_010186.1 ProteinModelPortal:Q12377
SMR:Q12377 DIP:DIP-1581N IntAct:Q12377 MINT:MINT-396028
STRING:Q12377 PaxDb:Q12377 PeptideAtlas:Q12377 EnsemblFungi:YDL097C
GeneID:851461 KEGG:sce:YDL097C OMA:DAMKCVA NextBio:968741
Genevestigator:Q12377 GermOnline:YDL097C Uniprot:Q12377
Length = 434
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 135/378 (35%), Positives = 205/378 (54%)
Query: 46 KELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSEL 105
+E +I EL L L + + K+KT K+++ +I+ ++P + +
Sbjct: 54 QETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDD 113
Query: 106 QIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVKXXXXXXXXXX 165
QI +C++ +++ + EKR FL+ + +LA L + ++Y ++L L+ L++
Sbjct: 114 QIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPS 173
Query: 166 XXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGILHAEEKDYK 225
+ LR IY P +DL SGILH E+KDYK
Sbjct: 174 LVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKDYK 233
Query: 226 TAYSYXXXXXXXXNALED----PRAVFSLKYMLLCKIMVSQADDVAGIISSKAGLQ-YVG 280
TA+SY + L +A LKYMLL KIM++ DDV I+++K + Y
Sbjct: 234 TAFSYFFESFESYHNLTTHNSYEKACQVLKYMLLSKIMLNLIDDVKNILNAKYTKETYQS 293
Query: 281 PELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEP 340
+DAMKAVA+A++ RSL F TAL+ ++ +L D + H ++LYDTLLE NLC++IEP
Sbjct: 294 RGIDAMKAVAEAYNNRSLLDFNTALKQYEKELMGDELTRSHFNALYDTLLESNLCKIIEP 353
Query: 341 YSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATL 400
+ VEI+HI+++I L VE KLSQMILDK F G LDQG G L ++E P DA Y + L
Sbjct: 354 FECVEISHISKIIGLDTQQVEGKLSQMILDKIFYGVLDQGNGWLYVYETPNQDATYDSAL 413
Query: 401 ETISNMGKVVDSLFVRSA 418
E + + KVVD LF +++
Sbjct: 414 ELVGQLNKVVDQLFEKAS 431
>GENEDB_PFALCIPARUM|PF14_0025 [details] [associations]
symbol:PF14_0025 "proteosome subunit, putative"
species:5833 "Plasmodium falciparum" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0006508
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175 EMBL:AE014187
GO:GO:0005838 KO:K03036 RefSeq:XP_001348198.1
ProteinModelPortal:Q8IM66 IntAct:Q8IM66 MINT:MINT-1600102
PRIDE:Q8IM66 EnsemblProtists:PF14_0025:mRNA GeneID:811608
KEGG:pfa:PF14_0025 EuPathDB:PlasmoDB:PF3D7_1402300
HOGENOM:HOG000281396 ProtClustDB:CLSZ2444932 Uniprot:Q8IM66
Length = 666
Score = 303 (111.7 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 60/179 (33%), Positives = 110/179 (61%)
Query: 241 LEDPRAVFSLKYMLLCKIMV-SQADDVAGIISSKAGLQYVG-PELDAMKAVADAHSKRSL 298
+E+ + + LKYMLLCK++ + ++ I+ L YV E+ + ++ ++ RSL
Sbjct: 484 IENVKIIIPLKYMLLCKVLEENNRKEINNILCENNKLNYVSHKEIQILLDISKSYENRSL 543
Query: 299 KLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPID 358
+FE +++ + D +++ +L LY+ LLE+N+ ++IE YS +++ +I + + L I+
Sbjct: 544 DIFEKIIKNSLFLINIDKVIYNYLKELYELLLEKNILKIIEAYSCIDLHYIGQKLNLDIN 603
Query: 359 HVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRS 417
+ KLS+MILDKK GTLDQ VG LI+++D +Y L+ I+N+ + VD L+ ++
Sbjct: 604 KIISKLSEMILDKKLNGTLDQNVGILILYDDMPETKMYQNVLDIINNLTESVDILYEKA 662
Score = 202 (76.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 82/353 (23%), Positives = 148/353 (41%)
Query: 38 SSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVA 97
++ + +++ + I L D + L T +F+++P+AKTAK++R I++ ++
Sbjct: 71 TNEKVMQINDKLIYLLCDYYINKKEIDKLIEFTTSNENYFNILPQAKTAKLIRNIVEKIS 130
Query: 98 K-IPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVKX 156
K I S L I + K+ + W +KR FLR R+E ++ L + ++Y AL+L+ L+K
Sbjct: 131 KKIRNISTLYI-IFKKYMNWAYEKKRNFLRCRIEVKIIILYIIKQKYKTALSLIDRLLKE 189
Query: 157 XXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGI 216
+ L+ I IDL SGI
Sbjct: 190 VKKVDDKTLLLELYIVQTKIYMLLKNSTKMKASLTFAKNIANTINTAIYINSEIDLLSGI 249
Query: 217 LHAEEKDYKTAY-----SYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIIS 271
L EKDYK+AY Y N+ + S K+ I++ + + I S
Sbjct: 250 LFIYEKDYKSAYIYLYECYETLYTYIYNSHNNTMDFLSKKHNDFYSILIHNIINTSTISS 309
Query: 272 SKA--GLQYVGPELDAMKAVADAHSKRS--LKLFETALRDFKAQLEEDPIVHRHLSSLYD 327
+ + P L + + + + L L E + L ++ + +SS Y+
Sbjct: 310 QNKTKSISQISPFLLSFYTFYEYYDTNNSILSLDEMNIISNNLNLIYSDVICK-ISSSYE 368
Query: 328 TLLEQNLCRLIEPYSRVEIAHIAELIE-LPIDHVEKKLSQMILDKKFAGTLDQ 379
L + + + P +E+ + ELI+ L ID+ L + +D K A TL++
Sbjct: 369 ELEQDKMYCITNP---IELNY--ELIQKLSIDNYGN-LIETKMDTK-AKTLNR 414
>UNIPROTKB|Q8IM66 [details] [associations]
symbol:PF14_0025 "Proteosome subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0004175
EMBL:AE014187 GO:GO:0005838 KO:K03036 RefSeq:XP_001348198.1
ProteinModelPortal:Q8IM66 IntAct:Q8IM66 MINT:MINT-1600102
PRIDE:Q8IM66 EnsemblProtists:PF14_0025:mRNA GeneID:811608
KEGG:pfa:PF14_0025 EuPathDB:PlasmoDB:PF3D7_1402300
HOGENOM:HOG000281396 ProtClustDB:CLSZ2444932 Uniprot:Q8IM66
Length = 666
Score = 303 (111.7 bits), Expect = 4.4e-26, P = 4.4e-26
Identities = 60/179 (33%), Positives = 110/179 (61%)
Query: 241 LEDPRAVFSLKYMLLCKIMV-SQADDVAGIISSKAGLQYVG-PELDAMKAVADAHSKRSL 298
+E+ + + LKYMLLCK++ + ++ I+ L YV E+ + ++ ++ RSL
Sbjct: 484 IENVKIIIPLKYMLLCKVLEENNRKEINNILCENNKLNYVSHKEIQILLDISKSYENRSL 543
Query: 299 KLFETALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPID 358
+FE +++ + D +++ +L LY+ LLE+N+ ++IE YS +++ +I + + L I+
Sbjct: 544 DIFEKIIKNSLFLINIDKVIYNYLKELYELLLEKNILKIIEAYSCIDLHYIGQKLNLDIN 603
Query: 359 HVEKKLSQMILDKKFAGTLDQGVGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRS 417
+ KLS+MILDKK GTLDQ VG LI+++D +Y L+ I+N+ + VD L+ ++
Sbjct: 604 KIISKLSEMILDKKLNGTLDQNVGILILYDDMPETKMYQNVLDIINNLTESVDILYEKA 662
Score = 202 (76.2 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 82/353 (23%), Positives = 148/353 (41%)
Query: 38 SSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPKAKTAKIVRGIIDAVA 97
++ + +++ + I L D + L T +F+++P+AKTAK++R I++ ++
Sbjct: 71 TNEKVMQINDKLIYLLCDYYINKKEIDKLIEFTTSNENYFNILPQAKTAKLIRNIVEKIS 130
Query: 98 K-IPGTSELQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREYTEALTLLTSLVKX 156
K I S L I + K+ + W +KR FLR R+E ++ L + ++Y AL+L+ L+K
Sbjct: 131 KKIRNISTLYI-IFKKYMNWAYEKKRNFLRCRIEVKIIILYIIKQKYKTALSLIDRLLKE 189
Query: 157 XXXXXXXXXXXXXXXXXXXXHFSLRXXXXXXXXXXXXXXXXXXIYVPPAQQGTIDLQSGI 216
+ L+ I IDL SGI
Sbjct: 190 VKKVDDKTLLLELYIVQTKIYMLLKNSTKMKASLTFAKNIANTINTAIYINSEIDLLSGI 249
Query: 217 LHAEEKDYKTAY-----SYXXXXXXXXNALEDPRAVFSLKYMLLCKIMVSQADDVAGIIS 271
L EKDYK+AY Y N+ + S K+ I++ + + I S
Sbjct: 250 LFIYEKDYKSAYIYLYECYETLYTYIYNSHNNTMDFLSKKHNDFYSILIHNIINTSTISS 309
Query: 272 SKA--GLQYVGPELDAMKAVADAHSKRS--LKLFETALRDFKAQLEEDPIVHRHLSSLYD 327
+ + P L + + + + L L E + L ++ + +SS Y+
Sbjct: 310 QNKTKSISQISPFLLSFYTFYEYYDTNNSILSLDEMNIISNNLNLIYSDVICK-ISSSYE 368
Query: 328 TLLEQNLCRLIEPYSRVEIAHIAELIE-LPIDHVEKKLSQMILDKKFAGTLDQ 379
L + + + P +E+ + ELI+ L ID+ L + +D K A TL++
Sbjct: 369 ELEQDKMYCITNP---IELNY--ELIQKLSIDNYGN-LIETKMDTK-AKTLNR 414
>DICTYBASE|DDB_G0289361 [details] [associations]
symbol:csn2 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0289361 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CM000154_GR EMBL:AAFI02000139
Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 KO:K12176 OMA:SNSEPDV EMBL:DQ309430
RefSeq:XP_636285.1 ProteinModelPortal:Q54HL6 STRING:Q54HL6
EnsemblProtists:DDB0233100 GeneID:8627103 KEGG:ddi:DDB_G0289361
ProtClustDB:CLSZ2429788 Uniprot:Q54HL6
Length = 449
Score = 204 (76.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 54/200 (27%), Positives = 101/200 (50%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLL-CKIM 259
+P P G I G +H EK+++ A++ + + R + LKY++L C +M
Sbjct: 232 IPHPRIMGIIRECGGKMHMAEKEWEKAHTDFFEAFKNYDEAGNSRRIQCLKYLVLACMLM 291
Query: 260 VSQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVH 319
+S + S++A P++ AM + A+ K + FE L+D + + +DP +
Sbjct: 292 LSTINPFD---STEAKPYKNDPDILAMTNLVMAYEKNDIYAFEKILKDNRKTIMDDPFIR 348
Query: 320 RHLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQ 379
++ L + Q L +L++PY+R+ I+ I++ + +P VE L +ILD K G++DQ
Sbjct: 349 MYIEDLLRNIRTQVLLKLLKPYTRIRISFISKELNIPSSDVESLLVSLILDNKIRGSIDQ 408
Query: 380 GVGCLIIFEDPKADAIYPAT 399
V + + K+ A + T
Sbjct: 409 -VNQQLELDTAKSSAYWKYT 427
Score = 56 (24.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 20/99 (20%), Positives = 41/99 (41%)
Query: 62 RAQDLCNLLTQLRPFFSLIPKAKTAKIV-RGIIDAVAKIPGTSELQIALCKEMVQWTRAE 120
R D N+L + F + ++ + +GI + + ++ +++ + +++ T
Sbjct: 83 RIGDFDNMLESFKKFLPYTKSSASSNYIEKGINSVLDMVSSSNTIELDMIQKVFDLTLKS 142
Query: 121 KRTFLRQRV----EARLAALLMESREYTEALTLLTSLVK 155
+RV +LA LL E EY +L L K
Sbjct: 143 LLDTKNERVWFRTNLKLAKLLFEKAEYGRLAKILRDLHK 181
>UNIPROTKB|E2REA8 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008180 "signalosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301
CTD:9318 InterPro:IPR019280 Pfam:PF10075 EMBL:AAEX03016114
RefSeq:XP_535470.1 ProteinModelPortal:E2REA8 PRIDE:E2REA8
Ensembl:ENSCAFT00000023590 GeneID:478295 KEGG:cfa:478295
Uniprot:E2REA8
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>UNIPROTKB|P61201 [details] [associations]
symbol:COPS2 "COP9 signalosome complex subunit 2"
species:9606 "Homo sapiens" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0030182 "neuron
differentiation" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=NAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0008180 "signalosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0010388 "cullin deneddylation" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0003714 GO:GO:0045892 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006366
GO:GO:0004871 Gene3D:1.25.40.10 GO:GO:0008180 CleanEx:HS_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN
EMBL:AF084260 EMBL:AF100762 EMBL:AF212227 EMBL:CR542063
EMBL:BC012629 EMBL:L40388 EMBL:AF120268 IPI:IPI00018813
IPI:IPI00743825 RefSeq:NP_001137359.1 RefSeq:NP_004227.1
UniGene:Hs.369614 ProteinModelPortal:P61201 SMR:P61201
DIP:DIP-42076N IntAct:P61201 MINT:MINT-1204035 STRING:P61201
PhosphoSite:P61201 DMDM:47117681 PaxDb:P61201 PRIDE:P61201
DNASU:9318 Ensembl:ENST00000299259 Ensembl:ENST00000388901
GeneID:9318 KEGG:hsa:9318 UCSC:uc001zxf.3 UCSC:uc001zxh.3
GeneCards:GC15M049417 HGNC:HGNC:30747 HPA:HPA016867 HPA:HPA018271
MIM:604508 neXtProt:NX_P61201 PharmGKB:PA134952445 GenomeRNAi:9318
NextBio:34905 ArrayExpress:P61201 Bgee:P61201 CleanEx:HS_COPS2
Genevestigator:P61201 GermOnline:ENSG00000166200 InterPro:IPR019280
Pfam:PF10075 Uniprot:P61201
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>MGI|MGI:1330276 [details] [associations]
symbol:Cops2 "COP9 (constitutive photomorphogenic) homolog,
subunit 2 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0010388 "cullin deneddylation" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0035914 "skeletal muscle
cell differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
MGI:MGI:1330276 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0030182 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0035914 CleanEx:MM_CSN2
GO:GO:0010388 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 CTD:9318
HOVERGEN:HBG003924 InterPro:IPR019280 Pfam:PF10075 EMBL:AF087688
EMBL:AF114247 EMBL:AF114236 EMBL:AF114237 EMBL:AF114238
EMBL:AF114239 EMBL:AF114240 EMBL:AF114241 EMBL:AF114242
EMBL:AF114244 EMBL:AF114245 EMBL:AF114246 EMBL:AK010383
EMBL:AK084421 EMBL:AK132207 EMBL:BC023096 EMBL:AF071312
IPI:IPI00120513 IPI:IPI00480307 RefSeq:NP_034069.2 UniGene:Mm.3596
ProteinModelPortal:P61202 SMR:P61202 STRING:P61202
PhosphoSite:P61202 PaxDb:P61202 PRIDE:P61202
Ensembl:ENSMUST00000028635 Ensembl:ENSMUST00000110463 GeneID:12848
KEGG:mmu:12848 ChiTaRS:COPS2 NextBio:282396 Bgee:P61202
Genevestigator:P61202 GermOnline:ENSMUSG00000027206 Uniprot:P61202
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>RGD|628791 [details] [associations]
symbol:Cops2 "COP9 signalosome subunit 2" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008283 "cell proliferation" evidence=IEA;ISO] [GO:0010388
"cullin deneddylation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=IDA] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>UNIPROTKB|P61203 [details] [associations]
symbol:Cops2 "COP9 signalosome complex subunit 2"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 RGD:628791
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0030182
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000122
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
CTD:9318 HOVERGEN:HBG003924 OrthoDB:EOG43N7CN InterPro:IPR019280
Pfam:PF10075 EMBL:AB081072 EMBL:BC061864 IPI:IPI00193753
IPI:IPI00454366 RefSeq:NP_695209.1 UniGene:Rn.11556
ProteinModelPortal:P61203 SMR:P61203 STRING:P61203 PRIDE:P61203
GeneID:261736 KEGG:rno:261736 UCSC:RGD:628791 InParanoid:P61203
NextBio:624390 Genevestigator:P61203 GermOnline:ENSRNOG00000008744
Uniprot:P61203
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>ZFIN|ZDB-GENE-040625-15 [details] [associations]
symbol:cops2 "COP9 constitutive photomorphogenic
homolog subunit 2 (Arabidopsis)" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0008180
"signalosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040625-15 GO:GO:0005737 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
GeneTree:ENSGT00530000063301 EMBL:BC071320 IPI:IPI00488001
RefSeq:NP_001002055.1 UniGene:Dr.78251 ProteinModelPortal:Q6IQT4
STRING:Q6IQT4 PRIDE:Q6IQT4 Ensembl:ENSDART00000006124 GeneID:415145
KEGG:dre:415145 CTD:9318 HOVERGEN:HBG003924 InParanoid:Q6IQT4
OrthoDB:EOG43N7CN NextBio:20818820 ArrayExpress:Q6IQT4 Bgee:Q6IQT4
Uniprot:Q6IQT4
Length = 443
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 228 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 288 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 346 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTINGRIDQV 405
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 406 NQLLELDHQKRGGARYTA 423
>UNIPROTKB|G3X736 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
EMBL:DAAA02029106 UniGene:Bt.37059 ProteinModelPortal:G3X736
SMR:G3X736 PRIDE:G3X736 Ensembl:ENSBTAT00000017862 NextBio:20925241
Uniprot:G3X736
Length = 450
Score = 187 (70.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/198 (25%), Positives = 89/198 (44%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 235 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 294
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 295 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 352
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI+PY+R+ I I++ + + + VE L Q ILD G +DQ
Sbjct: 353 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVESLLVQCILDNTIHGRIDQV 412
Query: 381 VGCLIIFEDPKADAIYPA 398
L + + A Y A
Sbjct: 413 NQLLELDHQKRGGARYTA 430
>FB|FBgn0013746 [details] [associations]
symbol:alien "alien" species:7227 "Drosophila melanogaster"
[GO:0008231 "repressor ecdysone receptor complex" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035257 "nuclear hormone receptor binding"
evidence=IPI] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008180 "signalosome" evidence=NAS;IPI] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0004871 "signal transducer
activity" evidence=ISS] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0003714 GO:GO:0045892 GO:GO:0007095 GO:GO:0050821
GO:GO:0006911 EMBL:AE014134 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
GO:GO:0008180 InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
KO:K12176 OMA:SNSEPDV GeneTree:ENSGT00530000063301 EMBL:AF129079
EMBL:AY069836 EMBL:AY118505 EMBL:U57758 RefSeq:NP_523517.1
RefSeq:NP_723438.1 UniGene:Dm.20642 ProteinModelPortal:Q94899
SMR:Q94899 DIP:DIP-19507N IntAct:Q94899 MINT:MINT-775221
STRING:Q94899 PaxDb:Q94899 PRIDE:Q94899 EnsemblMetazoa:FBtr0079780
EnsemblMetazoa:FBtr0079781 EnsemblMetazoa:FBtr0331452 GeneID:34225
KEGG:dme:Dmel_CG9556 CTD:34225 FlyBase:FBgn0013746
InParanoid:Q94899 OrthoDB:EOG4QNKBG PhylomeDB:Q94899
GenomeRNAi:34225 NextBio:787477 Bgee:Q94899 GermOnline:CG9556
GO:GO:0008231 Uniprot:Q94899
Length = 444
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 52/205 (25%), Positives = 88/205 (42%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 229 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 288
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + +++ + FET LR ++ + D +
Sbjct: 289 KSG--INPFDSQEAKPYKNDPEILAMTNLVNSYQNNDINEFETILRQHRSNIMADQFIRE 346
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ L + Q L +LI PY + I IA + + VE L ILD G +DQ
Sbjct: 347 HIEDLLRNIRTQVLIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQ- 405
Query: 381 VGCLIIFEDPKADAIYPATLETISN 405
V ++ + + A LE SN
Sbjct: 406 VNQVLQLDKINSSASRYNALEKWSN 430
>UNIPROTKB|G5EHS2 [details] [associations]
symbol:MGCH7_ch7g1103 "COP9 signalosome complex subunit 2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 EMBL:CM000230 EMBL:CM001237 InterPro:IPR013143
SMART:SM00753 KO:K12176 RefSeq:XP_003720496.1
ProteinModelPortal:G5EHS2 EnsemblFungi:MGG_10325T0 GeneID:2681900
KEGG:mgr:MGG_10325 Uniprot:G5EHS2
Length = 522
Score = 158 (60.7 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 51/193 (26%), Positives = 87/193 (45%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
VP P G I G +H E+++K A S + + + LKY+LL +++
Sbjct: 234 VPHPKIMGIIRECGGKMHMAEENWKDAQSDFFESFRNYDEAGSLQRIQVLKYLLLTTMLM 293
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
D+ S + P + AMK + DA+ + + +E L+ L DP +
Sbjct: 294 RS--DINPFDSQETKPYRNDPRIAAMKDLVDAYQRDDIHQYEAVLKK-NTDLLADPFIAE 350
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
++ + T+ + + RLI PY RV + IA + + L +I+D K AG +DQ
Sbjct: 351 NIDEVTRTMRTKAVQRLIAPYERVRVDWIAAQLRITEAEARDILGFLIIDGKVAGKIDQS 410
Query: 381 VGCLIIFEDPKAD 393
G + I + +AD
Sbjct: 411 RGLVEI--ESRAD 421
>WB|WBGene00000814 [details] [associations]
symbol:csn-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0018991 GO:GO:0040010
GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV EMBL:FO080100 PIR:T25440 RefSeq:NP_491740.1
ProteinModelPortal:O01422 SMR:O01422 DIP:DIP-24665N IntAct:O01422
MINT:MINT-1040695 STRING:O01422 PaxDb:O01422 PRIDE:O01422
EnsemblMetazoa:B0025.2.1 EnsemblMetazoa:B0025.2.2
EnsemblMetazoa:B0025.2.3 GeneID:172278 KEGG:cel:CELE_B0025.2
UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/207 (23%), Positives = 88/207 (42%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P GTI G +H + + A++ + PR LKY++L +++
Sbjct: 228 IPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLI 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
D+ S +A PE+ AM + A+ ++ FE + + + DP +
Sbjct: 288 KS--DINPFDSQEAKPFKNEPEIVAMTQMVQAYQDNDIQAFEQIMAAHQDSIMADPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H L + + Q L RLI PY+ V I+++++ +++ V L ILD +++
Sbjct: 346 HTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDGLEAKINEE 405
Query: 381 VGCLIIFEDPKADAIYPATLETISNMG 407
G + E PK T + N G
Sbjct: 406 SGMI---EMPKNKKKMMVTSLVVPNAG 429
>UNIPROTKB|O01422 [details] [associations]
symbol:csn-2 "COP9 signalosome complex subunit 2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0030154 GO:GO:0048477 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000910 Gene3D:1.25.40.10 GO:GO:0008180
InterPro:IPR013143 SMART:SM00753 eggNOG:COG5159
HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV EMBL:FO080100 PIR:T25440
RefSeq:NP_491740.1 ProteinModelPortal:O01422 SMR:O01422
DIP:DIP-24665N IntAct:O01422 MINT:MINT-1040695 STRING:O01422
PaxDb:O01422 PRIDE:O01422 EnsemblMetazoa:B0025.2.1
EnsemblMetazoa:B0025.2.2 EnsemblMetazoa:B0025.2.3 GeneID:172278
KEGG:cel:CELE_B0025.2 UCSC:B0025.2.1 CTD:172278 WormBase:B0025.2
GeneTree:ENSGT00530000063301 InParanoid:O01422 NextBio:874805
Uniprot:O01422
Length = 495
Score = 157 (60.3 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 49/207 (23%), Positives = 88/207 (42%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P GTI G +H + + A++ + PR LKY++L +++
Sbjct: 228 IPHPLILGTIRECGGKMHLRDGRFLDAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLI 287
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
D+ S +A PE+ AM + A+ ++ FE + + + DP +
Sbjct: 288 KS--DINPFDSQEAKPFKNEPEIVAMTQMVQAYQDNDIQAFEQIMAAHQDSIMADPFIRE 345
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H L + + Q L RLI PY+ V I+++++ +++ V L ILD +++
Sbjct: 346 HTEELMNNIRTQVLLRLIRPYTNVRISYLSQKLKVSQKEVIHLLVDAILDDGLEAKINEE 405
Query: 381 VGCLIIFEDPKADAIYPATLETISNMG 407
G + E PK T + N G
Sbjct: 406 SGMI---EMPKNKKKMMVTSLVVPNAG 429
>TAIR|locus:2059289 [details] [associations]
symbol:FUS12 "FUSCA 12" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0030163
"protein catabolic process" evidence=TAS] [GO:0008180 "signalosome"
evidence=TAS;IPI] [GO:0009640 "photomorphogenesis"
evidence=RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005829
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0030163 GO:GO:0009585
EMBL:AC005623 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 EMBL:AF395058 EMBL:AY050437 EMBL:AY133536
EMBL:AY087622 IPI:IPI00525604 PIR:D84667 RefSeq:NP_565632.1
UniGene:At.13162 ProteinModelPortal:Q8W207 SMR:Q8W207 IntAct:Q8W207
STRING:Q8W207 PaxDb:Q8W207 PRIDE:Q8W207 EnsemblPlants:AT2G26990.1
GeneID:817241 KEGG:ath:AT2G26990 TAIR:At2g26990 eggNOG:COG5159
HOGENOM:HOG000194333 InParanoid:Q8W207 KO:K12176 OMA:SNSEPDV
PhylomeDB:Q8W207 ProtClustDB:CLSN2688459 Genevestigator:Q8W207
GermOnline:AT2G26990 Uniprot:Q8W207
Length = 439
Score = 155 (59.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/179 (23%), Positives = 85/179 (47%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E+ ++ A + + + R + LKY++L +++
Sbjct: 224 IPHPRIMGIIRECGGKMHMAERQWEEAATDFFEAFKNYDEAGNQRRIQCLKYLVLANMLM 283
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+V +A PE+ AM + A+ + + FE L+ + + +DP +
Sbjct: 284 ES--EVNPFDGQEAKPYKNDPEILAMTNLIAAYQRNEIIEFERILKSNRRTIMDDPFIRN 341
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQ 379
++ L + Q L +LI+PY+++ I I++ + +P V + L +ILD + G +D+
Sbjct: 342 YMEDLLKKVRTQVLLKLIKPYTKIGIPFISKELNVPETDVTELLVSLILDSRIDGHIDE 400
>ASPGD|ASPL0000076227 [details] [associations]
symbol:csnB species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 Gene3D:1.25.40.10
EMBL:BN001303 GO:GO:0008180 InterPro:IPR013143 SMART:SM00753
eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176 OMA:SNSEPDV
EMBL:AACD01000081 RefSeq:XP_662387.1 STRING:Q5B3U7
EnsemblFungi:CADANIAT00005639 GeneID:2872575 KEGG:ani:AN4783.2
OrthoDB:EOG4PZNGN Uniprot:Q5B3U7
Length = 506
Score = 150 (57.9 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 42/186 (22%), Positives = 85/186 (45%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
VP P G I G +H E++++ A S + + + LKY++L +++
Sbjct: 233 VPHPKIMGIIRECGGKMHMSEENWEEAQSDFFESFRNYDEAGSMQRIQVLKYLVLTTMLM 292
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
D+ S + P + AM + DA + + +E L + DP +
Sbjct: 293 KS--DINPFHSQETKPYKTDPRISAMTDLVDAFQRDDIHAYEEVLSK-NPDVLADPFIAE 349
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
++ + + + + +LI PY+R ++ I++ I++ + + LS +ILDKK +DQ
Sbjct: 350 NIDEVSRNMRTKAILKLIAPYTRFTLSFISKHIKISVTEAQDILSFLILDKKLNAKIDQE 409
Query: 381 VGCLII 386
G +++
Sbjct: 410 SGTVVV 415
Score = 46 (21.3 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 33/140 (23%), Positives = 58/140 (41%)
Query: 14 AQAKEASNPSDAISMLYRV--LDDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLT 71
A+ + NP +AI V L+ +K+ E L R + + LLT
Sbjct: 40 AKQIKVDNPEEAIDEFLGVPALEQDKGDWGFKGLKQAIKLEFK-LGRYSDAVEHYRELLT 98
Query: 72 QLRPFFSLIPKAKTAKIVRGIIDAVAKIPGTSELQIALCKE--------MVQWTRAEKRT 123
++ S + + + K + ++D + K G+ + + C E Q T E R
Sbjct: 99 YVK---SAVTRNYSEKSINNMLDYIEK--GSDDEKAYQCMEEFYSLTLNSFQNTNNE-RL 152
Query: 124 FLRQRVEARLAALLMESREY 143
+L+ + +LA L +E REY
Sbjct: 153 WLKTNI--KLARLWLERREY 170
>UNIPROTKB|F1SQG5 [details] [associations]
symbol:COPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] InterPro:IPR011990 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0008283 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 OMA:SNSEPDV GeneTree:ENSGT00530000063301
InterPro:IPR019280 Pfam:PF10075 EMBL:CU041367 EMBL:CU407149
Ensembl:ENSSSCT00000005137 ArrayExpress:F1SQG5 Uniprot:F1SQG5
Length = 385
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 38/161 (23%), Positives = 73/161 (45%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H E +++ A++ + PR LKY++L +++
Sbjct: 220 IPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFKNYDESGSPRRTTCLKYLVLANMLM 279
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
+ S +A PE+ AM + A+ + FE L+ + + +DP +
Sbjct: 280 KSG--INPFDSQEAKPYKNDPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE 337
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVE 361
H+ L + Q L +LI+PY+R+ I I++ + L ++
Sbjct: 338 HIEELLRNIRTQVLIKLIKPYTRIHIPFISKKLNLSFSDLQ 378
>POMBASE|SPAPB17E12.04c [details] [associations]
symbol:csn2 "COP9/signalosome complex subunit Csn2"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPAPB17E12.04c GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006974 GO:GO:0008180 GO:GO:0010388 InterPro:IPR013143
SMART:SM00753 eggNOG:COG5159 HOGENOM:HOG000194333 KO:K12176
OMA:SNSEPDV OrthoDB:EOG4PZNGN EMBL:AF314168 RefSeq:NP_001018220.1
ProteinModelPortal:Q9HFR0 IntAct:Q9HFR0 STRING:Q9HFR0
EnsemblFungi:SPAPB17E12.04c.1 GeneID:3361420
KEGG:spo:SPAPB17E12.04c NextBio:20811469 Uniprot:Q9HFR0
Length = 437
Score = 145 (56.1 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 42/206 (20%), Positives = 97/206 (47%)
Query: 202 VP-PAQQGTIDLQSGILHAEEKDYKTAYSYXXXXXXXXNALEDPRAVFSLKYMLLCKIMV 260
+P P G I G +H +E + A + + + LKY++L M+
Sbjct: 230 IPHPRIMGIIRECGGKMHMQENQWSEAQTNFFESFKSYDEAGSSDRIRVLKYLVLAN-ML 288
Query: 261 SQADDVAGIISSKAGLQYVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
S+++ + S + P + AM + +A+ R + E L+ ++ + +D + +
Sbjct: 289 SESE-INPFDSPETQPYKDNPHIIAMTKLVEAYQIRDITAVERILQTYQHDILDDDFIRQ 347
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
++ + ++ Q L L++PY+ V+++ +A+ + + I +E+ L +I+D++ G +D
Sbjct: 348 YVDKILYSIRSQVLIELVKPYTSVKLSLLAKKLGVSISIIEQALVGLIIDERVNGKIDM- 406
Query: 381 VGCLIIFEDPKADAIYPATLETISNM 406
V + PK + I+ +E + +
Sbjct: 407 VNEVFTISQPK-NTIHNQLVEDVQKL 431
>UNIPROTKB|F1NPA2 [details] [associations]
symbol:PSMD11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0043248 "proteasome assembly" evidence=IEA]
[GO:0048863 "stem cell differentiation" evidence=IEA]
GeneTree:ENSGT00530000063301 EMBL:AADN02053959 EMBL:AADN02053960
IPI:IPI00598610 Ensembl:ENSGALT00000040727 OMA:LYLFLDM
Uniprot:F1NPA2
Length = 84
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 25 AISMLYRVL--DDPSSSSEALRVKELAITELSDLLRQENRAQDLCNLLTQLRPFFSLIPK 82
+I +L+ ++ D + EA++VKE +I EL LL + +A++L LL +RPF I K
Sbjct: 3 SIGILHSIVKRDVQENDEEAVQVKEQSILELGSLLAKTGQAEELGGLLKYVRPFLISIIK 62
Query: 83 AKTAKIVRGII 93
AK A++VR ++
Sbjct: 63 AKAARLVRSLL 73
>UNIPROTKB|J3KSW3 [details] [associations]
symbol:PSMD11 "26S proteasome non-ATPase regulatory subunit
11" species:9606 "Homo sapiens" [GO:0022624 "proteasome accessory
complex" evidence=IEA] HGNC:HGNC:9556 EMBL:AC005899 EMBL:AC079336
Ensembl:ENST00000578213 Uniprot:J3KSW3
Length = 45
Score = 112 (44.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 106 QIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESREY 143
++ LC E ++W ++EKRTFLRQ +EARL +L +++ Y
Sbjct: 8 EVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRY 45
>TAIR|locus:2098851 [details] [associations]
symbol:FUS6 "FUSCA 6" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008180 "signalosome" evidence=TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0000338
"protein deneddylation" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0009646 "response to absence of light"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000003 "reproduction" evidence=RCA]
[GO:0006325 "chromatin organization" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006461 GO:GO:0009651
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0006972
GO:GO:0009646 EMBL:AL137898 GO:GO:0009585 GO:GO:0008180
GO:GO:0010388 EMBL:L26498 EMBL:AF395057 EMBL:AF360295 EMBL:AK117532
EMBL:AY051056 EMBL:AJ243015 IPI:IPI00545799 PIR:T47906
RefSeq:NP_567109.1 UniGene:At.303 ProteinModelPortal:P45432
IntAct:P45432 STRING:P45432 PaxDb:P45432 PRIDE:P45432
EnsemblPlants:AT3G61140.1 GeneID:825286 KEGG:ath:AT3G61140
TAIR:At3g61140 eggNOG:COG5187 HOGENOM:HOG000091977
InParanoid:P45432 KO:K12175 OMA:CPPLRVE PhylomeDB:P45432
ProtClustDB:CLSN2689283 Genevestigator:P45432 GermOnline:AT3G61140
InterPro:IPR019585 Pfam:PF10602 Uniprot:P45432
Length = 441
Score = 119 (46.9 bits), Expect = 0.00032, P = 0.00032
Identities = 43/217 (19%), Positives = 90/217 (41%)
Query: 204 PAQQGTIDLQSGILHAEEKDYK-TAYSYXXXXXXXXNALEDPRAVFSLK-YMLLCKIMVS 261
P + SG+ H E K YK A + N+ + A + Y LC +
Sbjct: 211 PMVNAKLRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASF 270
Query: 262 QADDVAGIISSKAGLQ-YVGPELDAMKAVADAHSKRSLKLFETALRDFKAQLEEDPIVHR 320
++ + + ++ D + + D +S R E L K+ L D +H
Sbjct: 271 DRSELKQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEY-LASLKSNLLLDIHLHD 329
Query: 321 HLSSLYDTLLEQNLCRLIEPYSRVEIAHIAELIELPIDHVEKKLSQMILDKKFAGTLDQG 380
H+ +LYD + ++ L + P+ V+++ +A+ + + +EK+L +I D + +D
Sbjct: 330 HVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSH 389
Query: 381 VGCLIIFEDPKADAIYPATLETISNMGKVVDSLFVRS 417
L + +A + L+ + + V ++ +R+
Sbjct: 390 NKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRA 426
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.132 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 422 375 0.00088 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 603 (64 KB)
Total size of DFA: 196 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.45u 0.10s 27.55t Elapsed: 00:00:01
Total cpu time: 27.46u 0.10s 27.56t Elapsed: 00:00:01
Start: Sat May 11 05:15:41 2013 End: Sat May 11 05:15:42 2013