Query 014557
Match_columns 422
No_of_seqs 437 out of 2496
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 06:18:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014557.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014557hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 3.2E-64 6.8E-69 497.3 30.9 329 44-422 8-344 (452)
2 PLN02533 probable purple acid 100.0 3.2E-61 6.9E-66 490.0 38.7 291 82-422 40-334 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 2E-33 4.3E-38 274.0 20.4 194 208-422 4-205 (294)
4 PF09423 PhoD: PhoD-like phosp 100.0 6E-27 1.3E-31 241.9 27.2 303 94-421 5-376 (453)
5 COG3540 PhoD Phosphodiesterase 99.9 4.5E-26 9.8E-31 224.6 19.2 304 94-421 45-417 (522)
6 cd07395 MPP_CSTP1 Homo sapiens 99.9 8.8E-26 1.9E-30 216.8 19.5 186 208-422 4-218 (262)
7 cd07378 MPP_ACP5 Homo sapiens 99.9 1.1E-25 2.3E-30 217.8 18.8 182 209-422 1-213 (277)
8 PTZ00422 glideosome-associated 99.9 1.1E-24 2.4E-29 216.1 18.8 184 208-422 26-260 (394)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 2.4E-23 5.1E-28 200.6 17.5 179 209-422 1-228 (267)
10 cd07402 MPP_GpdQ Enterobacter 99.9 9.5E-22 2.1E-26 186.0 17.1 173 210-422 1-194 (240)
11 cd07401 MPP_TMEM62_N Homo sapi 99.9 2.3E-21 5E-26 185.5 19.3 187 211-422 2-210 (256)
12 PRK11148 cyclic 3',5'-adenosin 99.9 1.3E-20 2.9E-25 182.2 17.5 172 208-421 14-206 (275)
13 KOG2679 Purple (tartrate-resis 99.8 2E-20 4.4E-25 172.6 12.2 182 208-421 43-254 (336)
14 cd07399 MPP_YvnB Bacillus subt 99.8 5.8E-20 1.3E-24 171.3 14.4 145 209-422 1-161 (214)
15 cd00842 MPP_ASMase acid sphing 99.8 6.9E-19 1.5E-23 172.0 15.1 188 213-421 42-260 (296)
16 PF00149 Metallophos: Calcineu 99.8 1.1E-18 2.4E-23 152.7 10.4 190 209-422 1-200 (200)
17 cd08163 MPP_Cdc1 Saccharomyces 99.7 4.8E-17 1E-21 155.5 15.2 169 225-422 35-228 (257)
18 TIGR03729 acc_ester putative p 99.7 1.6E-16 3.4E-21 150.7 13.5 175 210-422 1-221 (239)
19 cd07392 MPP_PAE1087 Pyrobaculu 99.7 1.3E-15 2.8E-20 138.2 15.1 165 211-421 1-172 (188)
20 cd07383 MPP_Dcr2 Saccharomyces 99.7 5.7E-16 1.2E-20 142.7 12.7 146 208-422 2-176 (199)
21 cd07393 MPP_DR1119 Deinococcus 99.7 2.3E-15 4.9E-20 142.1 15.9 170 211-422 1-205 (232)
22 TIGR03767 P_acnes_RR metalloph 99.7 1.8E-15 4E-20 152.7 15.4 90 329-421 290-391 (496)
23 COG1409 Icc Predicted phosphoh 99.6 5.1E-15 1.1E-19 143.5 16.8 178 209-421 1-192 (301)
24 cd07404 MPP_MS158 Microscilla 99.5 1.8E-14 3.8E-19 128.8 9.2 142 211-422 1-149 (166)
25 cd07388 MPP_Tt1561 Thermus the 99.5 2.9E-13 6.3E-18 126.4 17.4 176 208-420 4-189 (224)
26 cd07400 MPP_YydB Bacillus subt 99.5 6E-14 1.3E-18 122.2 12.0 113 211-422 1-125 (144)
27 TIGR03768 RPA4764 metallophosp 99.5 4.3E-13 9.3E-18 134.4 17.2 92 329-421 291-410 (492)
28 cd00840 MPP_Mre11_N Mre11 nucl 99.5 1.3E-13 2.7E-18 128.6 11.6 181 210-421 1-200 (223)
29 cd07385 MPP_YkuE_C Bacillus su 99.5 5.4E-13 1.2E-17 124.6 13.2 160 208-421 1-165 (223)
30 PRK11340 phosphodiesterase Yae 99.4 3.8E-12 8.3E-17 122.9 15.1 157 208-421 49-213 (271)
31 cd07389 MPP_PhoD Bacillus subt 99.4 1.1E-11 2.4E-16 116.4 13.6 142 210-351 1-169 (228)
32 KOG1432 Predicted DNA repair e 99.3 2.5E-11 5.5E-16 116.3 15.2 189 208-421 53-310 (379)
33 cd00838 MPP_superfamily metall 99.3 2.7E-11 6E-16 101.7 11.1 112 212-422 1-115 (131)
34 cd07379 MPP_239FB Homo sapiens 99.3 4E-11 8.8E-16 103.4 10.4 116 210-422 1-116 (135)
35 cd07397 MPP_DevT Myxococcus xa 99.2 8.6E-10 1.9E-14 103.5 15.4 65 209-305 1-65 (238)
36 PRK05340 UDP-2,3-diacylglucosa 99.1 4E-10 8.6E-15 107.0 10.7 175 209-421 1-198 (241)
37 COG1408 Predicted phosphohydro 99.1 5.7E-10 1.2E-14 108.0 11.6 75 208-306 44-121 (284)
38 PF12850 Metallophos_2: Calcin 99.1 7E-10 1.5E-14 97.3 9.5 58 209-302 1-59 (156)
39 cd08166 MPP_Cdc1_like_1 unchar 99.0 9.8E-10 2.1E-14 100.0 10.1 36 377-422 112-147 (195)
40 PF14582 Metallophos_3: Metall 99.0 5.5E-09 1.2E-13 95.5 14.2 192 208-421 5-217 (255)
41 cd07403 MPP_TTHA0053 Thermus t 99.0 2.6E-09 5.6E-14 91.6 9.4 45 376-421 58-102 (129)
42 COG2129 Predicted phosphoester 99.0 1.8E-08 4E-13 92.3 14.7 175 208-422 3-187 (226)
43 KOG3770 Acid sphingomyelinase 99.0 1.3E-08 2.9E-13 104.6 15.2 175 225-421 199-403 (577)
44 cd08165 MPP_MPPE1 human MPPE1 98.9 4.4E-09 9.4E-14 93.2 7.9 52 231-303 35-89 (156)
45 COG1768 Predicted phosphohydro 98.9 3.2E-08 6.9E-13 87.0 12.7 143 235-421 44-198 (230)
46 TIGR00040 yfcE phosphoesterase 98.9 2.2E-08 4.7E-13 88.7 11.4 37 209-245 1-39 (158)
47 cd07384 MPP_Cdc1_like Saccharo 98.9 9.6E-09 2.1E-13 92.4 8.9 28 377-422 119-146 (171)
48 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 8.2E-08 1.8E-12 90.6 14.4 73 212-303 2-81 (231)
49 cd00845 MPP_UshA_N_like Escher 98.7 1E-07 2.2E-12 90.8 12.6 171 209-421 1-205 (252)
50 cd08164 MPP_Ted1 Saccharomyces 98.7 2.4E-08 5.2E-13 90.8 7.3 61 226-304 35-112 (193)
51 cd00841 MPP_YfcE Escherichia c 98.7 2.9E-08 6.3E-13 87.4 7.6 35 210-246 1-36 (155)
52 TIGR00583 mre11 DNA repair pro 98.7 8.2E-08 1.8E-12 97.3 11.4 40 208-247 3-55 (405)
53 cd07394 MPP_Vps29 Homo sapiens 98.7 4.2E-07 9.2E-12 82.3 13.8 37 210-246 1-41 (178)
54 cd07410 MPP_CpdB_N Escherichia 98.7 6.7E-07 1.4E-11 86.6 15.3 184 209-421 1-229 (277)
55 cd07398 MPP_YbbF-LpxH Escheric 98.6 1.8E-07 4E-12 86.8 9.2 181 212-421 1-200 (217)
56 COG0420 SbcD DNA repair exonuc 98.6 2E-07 4.3E-12 94.8 9.6 74 209-304 1-89 (390)
57 cd07406 MPP_CG11883_N Drosophi 98.6 1.3E-06 2.7E-11 83.9 13.8 172 209-421 1-206 (257)
58 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.5 1.9E-06 4.2E-11 82.6 14.9 185 211-422 1-228 (262)
59 PHA02546 47 endonuclease subun 98.5 1.3E-06 2.8E-11 87.2 13.8 74 209-303 1-89 (340)
60 cd07411 MPP_SoxB_N Thermus the 98.5 1.8E-06 4E-11 83.0 12.9 154 226-421 41-218 (264)
61 cd07408 MPP_SA0022_N Staphyloc 98.5 1.7E-06 3.6E-11 83.0 12.5 178 209-421 1-212 (257)
62 cd07412 MPP_YhcR_N Bacillus su 98.4 6E-06 1.3E-10 80.5 14.2 62 358-421 177-240 (288)
63 cd07409 MPP_CD73_N CD73 ecto-5 98.3 1.3E-05 2.9E-10 77.8 14.0 155 226-421 40-217 (281)
64 cd07407 MPP_YHR202W_N Saccharo 98.3 4.6E-05 9.9E-10 74.0 16.9 181 208-421 5-230 (282)
65 PRK09419 bifunctional 2',3'-cy 98.2 2.9E-05 6.2E-10 89.4 17.1 182 207-421 659-881 (1163)
66 COG0622 Predicted phosphoester 98.2 1.9E-05 4E-10 70.9 12.2 38 209-246 2-40 (172)
67 TIGR00619 sbcd exonuclease Sbc 98.2 5E-06 1.1E-10 79.6 8.0 73 209-303 1-88 (253)
68 cd07382 MPP_DR1281 Deinococcus 98.2 5.8E-05 1.3E-09 72.1 15.1 167 210-421 1-177 (255)
69 KOG3662 Cell division control 98.2 1.4E-05 3.1E-10 79.9 11.2 114 208-350 48-183 (410)
70 cd07425 MPP_Shelphs Shewanella 98.1 4.7E-06 1E-10 77.4 6.1 21 401-421 158-178 (208)
71 PRK04036 DNA polymerase II sma 98.1 2.6E-05 5.6E-10 81.8 11.8 88 207-304 242-344 (504)
72 cd07405 MPP_UshA_N Escherichia 98.1 0.00011 2.5E-09 71.5 15.5 185 209-421 1-220 (285)
73 cd07390 MPP_AQ1575 Aquifex aeo 98.1 4E-05 8.6E-10 68.6 11.2 63 212-303 2-82 (168)
74 PRK10966 exonuclease subunit S 98.0 1.6E-05 3.4E-10 81.2 8.7 74 209-304 1-88 (407)
75 KOG2863 RNA lariat debranching 98.0 5.6E-05 1.2E-09 73.5 11.4 184 209-421 1-229 (456)
76 COG2908 Uncharacterized protei 98.0 2.1E-05 4.6E-10 73.1 7.9 72 213-303 2-80 (237)
77 COG0737 UshA 5'-nucleotidase/2 97.9 0.00022 4.8E-09 75.3 14.7 184 207-421 25-246 (517)
78 TIGR00282 metallophosphoestera 97.9 0.00066 1.4E-08 65.2 16.4 169 209-421 1-180 (266)
79 PRK09453 phosphodiesterase; Pr 97.9 3.3E-05 7.1E-10 70.0 7.1 75 209-303 1-76 (182)
80 TIGR01530 nadN NAD pyrophospha 97.9 0.0003 6.5E-09 74.8 15.1 111 294-421 85-217 (550)
81 cd08162 MPP_PhoA_N Synechococc 97.9 0.00017 3.6E-09 71.2 12.1 38 209-246 1-50 (313)
82 PRK09558 ushA bifunctional UDP 97.8 0.0003 6.5E-09 74.9 14.8 184 207-421 33-256 (551)
83 cd07391 MPP_PF1019 Pyrococcus 97.7 8.4E-05 1.8E-09 66.7 6.3 70 212-303 1-88 (172)
84 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00027 5.8E-09 62.1 7.9 47 376-422 71-122 (150)
85 PRK11907 bifunctional 2',3'-cy 97.5 0.0024 5.2E-08 70.3 16.2 59 358-421 295-353 (814)
86 PRK09419 bifunctional 2',3'-cy 97.5 0.0028 6.1E-08 73.2 16.5 56 361-421 223-279 (1163)
87 TIGR00024 SbcD_rel_arch putati 97.3 0.00055 1.2E-08 64.3 7.3 70 209-303 15-102 (225)
88 PRK09418 bifunctional 2',3'-cy 97.3 0.0046 9.9E-08 68.0 15.2 45 371-421 243-288 (780)
89 PHA02239 putative protein phos 97.3 0.00055 1.2E-08 64.7 7.0 70 209-303 1-73 (235)
90 cd07386 MPP_DNA_pol_II_small_a 97.3 0.00059 1.3E-08 64.8 6.9 82 212-303 2-94 (243)
91 PRK00166 apaH diadenosine tetr 97.2 0.00053 1.2E-08 66.3 5.3 67 209-303 1-69 (275)
92 TIGR01390 CycNucDiestase 2',3' 97.1 0.0086 1.9E-07 64.7 14.8 45 371-421 194-239 (626)
93 COG1311 HYS2 Archaeal DNA poly 97.1 0.013 2.7E-07 59.9 14.8 89 207-305 224-323 (481)
94 cd07423 MPP_PrpE Bacillus subt 97.1 0.00086 1.9E-08 63.3 6.2 68 210-303 2-80 (234)
95 COG4186 Predicted phosphoester 97.1 0.0079 1.7E-07 52.3 10.8 66 210-303 5-86 (186)
96 PRK09420 cpdB bifunctional 2', 97.0 0.016 3.4E-07 62.9 14.7 57 359-421 205-262 (649)
97 cd07424 MPP_PrpA_PrpB PrpA and 96.9 0.0015 3.3E-08 60.4 5.4 37 210-246 2-40 (207)
98 PRK13625 bis(5'-nucleosyl)-tet 96.8 0.0035 7.5E-08 59.7 7.0 69 209-303 1-79 (245)
99 cd07387 MPP_PolD2_C PolD2 (DNA 96.7 0.021 4.5E-07 54.6 11.7 146 211-367 2-176 (257)
100 PRK11439 pphA serine/threonine 96.6 0.0024 5.2E-08 59.6 4.6 37 210-246 18-56 (218)
101 PRK09968 serine/threonine-spec 96.6 0.0027 5.8E-08 59.4 4.8 37 210-246 16-54 (218)
102 PF00041 fn3: Fibronectin type 96.4 0.012 2.7E-07 45.1 7.0 76 85-186 2-77 (85)
103 cd07413 MPP_PA3087 Pseudomonas 96.4 0.0039 8.5E-08 58.4 4.7 67 211-303 1-76 (222)
104 cd07381 MPP_CapA CapA and rela 96.4 0.049 1.1E-06 51.5 12.0 131 281-421 70-218 (239)
105 cd07422 MPP_ApaH Escherichia c 96.4 0.0045 9.8E-08 59.3 4.9 64 212-303 2-67 (257)
106 COG5555 Cytolysin, a secreted 96.3 0.0065 1.4E-07 57.7 5.2 137 284-421 164-333 (392)
107 COG1407 Predicted ICC-like pho 96.3 0.012 2.6E-07 55.1 6.9 74 209-304 20-111 (235)
108 cd07421 MPP_Rhilphs Rhilph pho 96.2 0.0082 1.8E-07 58.2 5.8 37 210-246 3-46 (304)
109 cd00144 MPP_PPP_family phospho 96.2 0.0058 1.3E-07 56.8 4.6 66 212-303 1-68 (225)
110 TIGR00668 apaH bis(5'-nucleosy 96.1 0.0084 1.8E-07 57.8 4.9 37 210-246 2-40 (279)
111 smart00854 PGA_cap Bacterial c 96.0 0.11 2.4E-06 49.1 12.3 131 281-421 66-216 (239)
112 PF13277 YmdB: YmdB-like prote 94.8 0.64 1.4E-05 44.1 12.8 165 212-421 1-175 (253)
113 PF09587 PGA_cap: Bacterial ca 94.8 0.4 8.7E-06 45.6 11.6 125 290-421 75-227 (250)
114 KOG2310 DNA repair exonuclease 94.7 0.12 2.6E-06 53.4 8.2 42 208-249 13-67 (646)
115 COG1692 Calcineurin-like phosp 94.6 1.3 2.8E-05 41.7 14.0 171 209-421 1-179 (266)
116 cd07416 MPP_PP2B PP2B, metallo 93.8 0.088 1.9E-06 51.8 5.0 21 399-419 222-242 (305)
117 cd07420 MPP_RdgC Drosophila me 93.1 0.19 4.2E-06 49.7 6.0 21 399-419 253-273 (321)
118 smart00156 PP2Ac Protein phosp 93.1 0.21 4.6E-06 48.2 6.2 21 399-419 200-220 (271)
119 KOG4419 5' nucleotidase [Nucle 93.0 0.73 1.6E-05 48.4 10.2 56 355-421 211-268 (602)
120 KOG3947 Phosphoesterases [Gene 92.9 2.1 4.5E-05 41.0 12.3 68 208-305 61-128 (305)
121 cd07415 MPP_PP2A_PP4_PP6 PP2A, 92.6 0.19 4E-06 49.0 5.1 21 399-419 214-234 (285)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 92.5 0.18 3.8E-06 49.3 4.8 21 399-419 222-242 (293)
123 PTZ00239 serine/threonine prot 91.9 0.27 6E-06 48.2 5.4 21 399-419 215-235 (303)
124 PTZ00480 serine/threonine-prot 91.6 0.22 4.9E-06 49.1 4.3 21 399-419 231-251 (320)
125 cd07418 MPP_PP7 PP7, metalloph 91.5 0.36 7.8E-06 48.7 5.8 21 399-419 273-293 (377)
126 cd00063 FN3 Fibronectin type 3 90.7 2.6 5.6E-05 31.4 8.9 21 165-185 57-77 (93)
127 KOG0196 Tyrosine kinase, EPH ( 90.6 1.6 3.4E-05 47.7 9.7 37 165-201 498-537 (996)
128 PTZ00244 serine/threonine-prot 90.0 0.46 9.9E-06 46.5 4.9 21 399-419 224-244 (294)
129 PF04042 DNA_pol_E_B: DNA poly 89.2 0.39 8.5E-06 44.1 3.6 83 211-305 1-93 (209)
130 KOG4221 Receptor mediating net 89.2 1.4 3E-05 50.0 8.2 33 168-200 677-712 (1381)
131 cd07419 MPP_Bsu1_C Arabidopsis 88.7 0.97 2.1E-05 44.6 6.2 21 399-419 242-262 (311)
132 cd07417 MPP_PP5_C PP5, C-termi 87.7 1.1 2.4E-05 44.3 5.8 21 399-419 233-253 (316)
133 smart00060 FN3 Fibronectin typ 84.4 7.2 0.00016 27.9 7.7 22 165-186 57-78 (83)
134 KOG4258 Insulin/growth factor 81.7 7.1 0.00015 43.0 8.8 122 85-218 488-624 (1025)
135 PTZ00235 DNA polymerase epsilo 78.6 15 0.00033 35.7 9.3 80 208-303 27-122 (291)
136 KOG3513 Neural cell adhesion m 77.3 14 0.00031 41.9 9.7 74 86-184 823-896 (1051)
137 KOG4221 Receptor mediating net 73.7 33 0.00071 39.6 11.3 36 165-200 574-612 (1381)
138 PF07353 Uroplakin_II: Uroplak 50.3 18 0.0004 31.7 3.3 36 167-202 104-141 (184)
139 KOG0374 Serine/threonine speci 46.1 24 0.00052 35.1 3.9 21 399-419 233-253 (331)
140 KOG0372 Serine/threonine speci 45.4 41 0.00088 32.0 5.0 34 211-246 45-81 (303)
141 PRK09453 phosphodiesterase; Pr 43.7 23 0.00049 31.6 3.1 14 408-421 116-129 (182)
142 cd02852 Isoamylase_N_term Isoa 40.4 35 0.00077 28.2 3.6 23 162-184 48-70 (119)
143 cd02856 Glycogen_debranching_e 39.5 39 0.00084 27.2 3.6 23 162-184 44-66 (103)
144 cd01987 USP_OKCHK USP domain i 39.4 1.9E+02 0.004 23.3 7.9 23 399-421 74-96 (124)
145 KOG0371 Serine/threonine prote 37.6 52 0.0011 31.5 4.4 34 211-246 62-98 (319)
146 KOG3325 Membrane coat complex 36.2 34 0.00075 29.9 2.8 22 400-421 97-118 (183)
147 cd02860 Pullulanase_N_term Pul 35.3 46 0.001 26.5 3.3 24 162-185 46-69 (100)
148 cd02853 MTHase_N_term Maltooli 34.4 49 0.0011 25.5 3.3 20 164-184 41-60 (85)
149 TIGR02855 spore_yabG sporulati 30.9 41 0.00088 32.4 2.6 48 359-419 115-163 (283)
150 PF05582 Peptidase_U57: YabG p 30.6 51 0.0011 31.9 3.2 48 359-419 116-164 (287)
151 PF09294 Interfer-bind: Interf 30.2 43 0.00093 26.7 2.4 20 165-184 67-86 (106)
152 PF10179 DUF2369: Uncharacteri 29.0 48 0.001 32.5 2.8 18 166-183 16-33 (300)
153 COG2248 Predicted hydrolase (m 29.0 1.6E+02 0.0034 28.3 6.1 75 208-303 176-250 (304)
154 PF10179 DUF2369: Uncharacteri 27.7 55 0.0012 32.1 3.0 20 167-186 262-281 (300)
155 PRK10425 DNase TatD; Provision 26.2 80 0.0017 30.1 3.8 38 343-383 92-129 (258)
156 COG3065 Slp Starvation-inducib 25.6 75 0.0016 28.6 3.2 26 24-52 9-34 (191)
157 KOG4720 Ethanolamine kinase [L 25.0 95 0.0021 30.7 4.0 37 332-369 281-322 (391)
158 KOG0373 Serine/threonine speci 24.5 1.4E+02 0.003 28.0 4.8 34 211-246 48-84 (306)
159 CHL00186 psaI photosystem I su 24.0 28 0.00061 22.7 0.2 13 1-13 1-13 (36)
160 PF15284 PAGK: Phage-encoded v 23.6 1.3E+02 0.0029 22.0 3.6 17 24-40 9-25 (61)
161 PF02922 CBM_48: Carbohydrate- 23.4 1E+02 0.0022 23.3 3.4 24 163-186 49-74 (85)
162 KOG0375 Serine-threonine phosp 23.1 1.6E+02 0.0035 29.6 5.2 35 210-246 89-126 (517)
163 KOG3513 Neural cell adhesion m 23.0 3.8E+02 0.0082 31.0 8.7 76 84-186 616-695 (1051)
164 cd02850 Cellulase_N_term Cellu 22.6 2.2E+02 0.0048 22.0 5.1 23 162-184 55-78 (86)
165 PF13205 Big_5: Bacterial Ig-l 21.8 1.3E+02 0.0029 23.6 3.9 16 170-185 70-85 (107)
166 PRK11449 putative deoxyribonuc 21.7 92 0.002 29.7 3.3 32 343-374 98-129 (258)
167 COG2843 PgsA Putative enzyme o 21.6 2.2E+02 0.0047 28.9 6.0 54 361-421 213-267 (372)
168 PRK10301 hypothetical protein; 21.2 3.6E+02 0.0077 22.6 6.4 16 48-63 41-56 (124)
169 PF14030 DUF4245: Protein of u 20.8 1.3E+02 0.0029 26.7 3.9 38 68-108 54-91 (169)
170 COG4549 Uncharacterized protei 20.6 5.7E+02 0.012 22.8 7.5 21 161-181 115-136 (178)
171 KOG2476 Uncharacterized conser 20.2 2.8E+02 0.0062 28.9 6.4 37 208-246 5-46 (528)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-64 Score=497.25 Aligned_cols=329 Identities=38% Similarity=0.631 Sum_probs=281.6
Q ss_pred CCcCCCCCCCccccCCCcCCCCCCCCCCCCCCccccCCCCCCCceEEEEecCCCCcEEEEEEcCCCcCcCCCCCCCCCCC
Q 014557 44 IPTTLDGPFKPVTIPLDESFRGNAIDLPDTDPRVQRTVEGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSV 123 (422)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~qi~lt~~~~~~~~~v~W~T~~~~~g~~~~~~~p~~~ 123 (422)
.+..+.|+.-+..+...|++.-....++...|++. +.|||||||+++..++|+|+|.|.+..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~peQvhlS~~~~~~~m~VswvT~~~~------------- 69 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVV-----NSPEQVHLSFTDNLNEMRVSWVTGDGE------------- 69 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccC-----CCCCeEEEeccCCCCcEEEEEeCCCCC-------------
Confidence 45556777788888888888877777777666543 669999999999888999999998753
Q ss_pred ccEEEEcccCCCCCeE-EEEEEEEEeeeeccCCccccccCeEEEEEeCCCCCCCEEEEEeecCCCCCccceeEEEcCCCC
Q 014557 124 VSVVRYGTRRSQLNRK-ATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDS 202 (422)
Q Consensus 124 ~~~V~yg~~~~~~~~~-~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL~p~T~Y~Y~v~~~~~~~~s~~~~F~T~p~~ 202 (422)
.++|+||+.+++.... +++.+..++..+.. .+|++|++|+|++++|+|+|+||||||++. .||++++|+|+|.
T Consensus 70 ~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~---~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~--~wS~~f~F~t~p~- 143 (452)
T KOG1378|consen 70 ENVVRYGEVKDKLDNSAARGMTEAWTDGYAN---GWRDSGYIHDAVMKNLEPNTRYYYQVGSDL--KWSEIFSFKTPPG- 143 (452)
T ss_pred CceEEEeecCCCccccccccceEEEeccccc---ccceeeeEeeeeecCCCCCceEEEEeCCCC--CcccceEeECCCC-
Confidence 2799999887664332 35666666555432 347899999999999999999999999987 5999999999992
Q ss_pred CCCCcCeEEEEEecCCCCCChHHHHHHHHhCC-CCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchh-hHHHHH
Q 014557 203 SSTSYPSRIAIVGDVGLTYNTTSTVSHMISNR-PDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ-PRWDYW 280 (422)
Q Consensus 203 ~~~~~~~rf~v~gD~~~~~~~~~~~~~l~~~~-pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~-~~wd~~ 280 (422)
...+.+++++||+|.+.....++.+..++. +|+|||+|||+|++++ + .+||+|
T Consensus 144 --~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~-----------------------~n~~wD~f 198 (452)
T KOG1378|consen 144 --QDSPTRAAIFGDMGCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGY-----------------------SNWQWDEF 198 (452)
T ss_pred --ccCceeEEEEccccccccccchHhHHhcccCCcEEEEecchhhcCCC-----------------------CccchHHH
Confidence 224899999999999988877888877665 9999999999998754 3 589999
Q ss_pred HHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccC--CCCHhHH
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF--DKSGDQY 358 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~--~~~~~Q~ 358 (422)
.+++|++.+.+|+|++.||||+...... .|..|..||.||.+++++..+.||||++|++|||+|+|+.++ .+..+|+
T Consensus 199 ~r~vEp~As~vPymv~~GNHE~d~~~~~-~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY 277 (452)
T KOG1378|consen 199 GRQVEPIASYVPYMVCSGNHEIDWPPQP-CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQY 277 (452)
T ss_pred HhhhhhhhccCceEEecccccccCCCcc-cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHH
Confidence 9999999999999999999999876544 799999999999998888889999999999999999999875 4579999
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcc-cccchH--HHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKA-HYREAE--CMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~-~~~~~~--~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
+||+++|++++|+++||+||+.|+|||++... ++++.+ .+|..||+||.+++||++|.||+|+|
T Consensus 278 ~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~Y 344 (452)
T KOG1378|consen 278 QWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRY 344 (452)
T ss_pred HHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceeh
Confidence 99999999999877999999999999998765 677666 88999999999999999999999997
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=3.2e-61 Score=489.97 Aligned_cols=291 Identities=44% Similarity=0.796 Sum_probs=253.2
Q ss_pred CCCCCceEEEEecCCCCcEEEEEEcCCCcCcCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCcccccc
Q 014557 82 EGFEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTS 161 (422)
Q Consensus 82 ~~~~P~qi~lt~~~~~~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~ 161 (422)
....|+||||++++ +++|+|+|.|.+. ..+.|+||++++.++.++.|++.+|+.. ..|++
T Consensus 40 ~~~~P~qvhls~~~-~~~m~V~W~T~~~-------------~~~~V~yG~~~~~l~~~a~g~~~~~~~~------~~~~~ 99 (427)
T PLN02533 40 DPTHPDQVHISLVG-PDKMRISWITQDS-------------IPPSVVYGTVSGKYEGSANGTSSSYHYL------LIYRS 99 (427)
T ss_pred CCCCCceEEEEEcC-CCeEEEEEECCCC-------------CCCEEEEecCCCCCcceEEEEEEEEecc------ccccC
Confidence 45689999999997 8999999999864 2468999999999999999998888642 34779
Q ss_pred CeEEEEEeCCCCCCCEEEEEeecCCCCCccceeEEEcCCCCCCCCcCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEc
Q 014557 162 GIIHHVRLTGLKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLV 241 (422)
Q Consensus 162 ~~~h~v~l~gL~p~T~Y~Y~v~~~~~~~~s~~~~F~T~p~~~~~~~~~rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~ 241 (422)
+++|+|+|+||+|+|+|||||+..+ +|++++|||+|.. .++||+++||+|.......+++++.+.+|||||++
T Consensus 100 g~iH~v~l~~L~p~T~Y~Yrvg~~~---~s~~~~F~T~p~~----~~~~f~v~GDlG~~~~~~~tl~~i~~~~pD~vl~~ 172 (427)
T PLN02533 100 GQINDVVIGPLKPNTVYYYKCGGPS---STQEFSFRTPPSK----FPIKFAVSGDLGTSEWTKSTLEHVSKWDYDVFILP 172 (427)
T ss_pred CeEEEEEeCCCCCCCEEEEEECCCC---CccceEEECCCCC----CCeEEEEEEeCCCCcccHHHHHHHHhcCCCEEEEc
Confidence 9999999999999999999999754 6899999999863 37999999999987666778999998999999999
Q ss_pred CCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCccccccc--ccccchhcccccC
Q 014557 242 GDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQA--ENRTFVAYTSRFA 319 (422)
Q Consensus 242 GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~--~~~~~~~y~~~f~ 319 (422)
||++|++ .|+.+|+.|.+.++++.+.+|+|+++||||..... ....|..|..+|.
T Consensus 173 GDl~y~~-----------------------~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~~~~~f~~y~~rf~ 229 (427)
T PLN02533 173 GDLSYAN-----------------------FYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPILHPEKFTAYNARWR 229 (427)
T ss_pred Ccccccc-----------------------chHHHHHHHHHHhhhHhhcCceEEeCccccccccccccCcCccchhhccc
Confidence 9999864 24678999999999999999999999999986432 2356788999999
Q ss_pred CCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccc--hHH
Q 014557 320 FPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE--AEC 397 (422)
Q Consensus 320 ~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~--~~~ 397 (422)
||..+++...+.||||++|++|||+||++.++....+|++||+++|++++++++||+||++|+|+|++...+..+ ...
T Consensus 230 mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~ 309 (427)
T PLN02533 230 MPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVG 309 (427)
T ss_pred CCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHH
Confidence 998776777899999999999999999998888889999999999999988889999999999999875443222 245
Q ss_pred HHHHHHHHHHHcCCcEEEEccccCC
Q 014557 398 MRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 398 ~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
+|+.|++||++++||++|+||+|.|
T Consensus 310 ~r~~le~Ll~~~~VdlvlsGH~H~Y 334 (427)
T PLN02533 310 MKESMETLLYKARVDLVFAGHVHAY 334 (427)
T ss_pred HHHHHHHHHHHhCCcEEEecceecc
Confidence 7899999999999999999999987
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2e-33 Score=274.01 Aligned_cols=194 Identities=44% Similarity=0.774 Sum_probs=153.2
Q ss_pred CeEEEEEecCCCC-CChHHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh
Q 014557 208 PSRIAIVGDVGLT-YNTTSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (422)
Q Consensus 208 ~~rf~v~gD~~~~-~~~~~~~~~l~~--~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l 284 (422)
++||+++||+|.. .....+++++.+ .+|||||++||++|+++. ..+.+|+.|.+.+
T Consensus 4 ~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~---------------------~~~~~~~~~~~~~ 62 (294)
T cd00839 4 PFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGY---------------------NNGSRWDTFMRQI 62 (294)
T ss_pred cEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCC---------------------ccchhHHHHHHHH
Confidence 7999999999973 456788999887 789999999999985321 1125799999999
Q ss_pred hhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccC---CCCHhHHHHH
Q 014557 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF---DKSGDQYKWL 361 (422)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~---~~~~~Q~~WL 361 (422)
+++...+|+++++||||............+..++.++........+.||+|++|++|||+||++... ..+.+|++||
T Consensus 63 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL 142 (294)
T cd00839 63 EPLASYVPYMVTPGNHEADYNFSFYKIKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWL 142 (294)
T ss_pred HHHHhcCCcEEcCcccccccCCCCcccccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHH
Confidence 9998899999999999987543322221111123334333345568899999999999999998765 5689999999
Q ss_pred HHHHHhcccCCCCEEEEEeCCCcccCCccccc--chHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 362 EEDLANVEREVTPWLVATWHAPWYSTYKAHYR--EAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 362 ~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
+++|+++++++.+|+||++|+|+++....... .....++.|+++|++|+|+++|+||+|.|
T Consensus 143 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y 205 (294)
T cd00839 143 EADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAY 205 (294)
T ss_pred HHHHHHhcccCCCeEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceee
Confidence 99999987667899999999999986543322 24567899999999999999999999986
No 4
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.96 E-value=6e-27 Score=241.87 Aligned_cols=303 Identities=20% Similarity=0.291 Sum_probs=159.6
Q ss_pred cCCC-CcEEEEEEcCCCcCcCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeEEEEEeCCC
Q 014557 94 SSAH-DSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTGL 172 (422)
Q Consensus 94 ~~~~-~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~gL 172 (422)
++|| ..-+|.|....+.......+ ..+..|+|..+.+.....+.....+.. +....+.++|.++||
T Consensus 5 sGdp~~~svilWtR~~~~~~~~~~~----~~~~~V~~~va~d~~~~~~~~~~~~~~---------~~~~d~t~~v~v~gL 71 (453)
T PF09423_consen 5 SGDPTPDSVILWTRVTPPAAAGGMP----KAPVPVRWEVATDPEFSNVVRSGTVTT---------TAERDFTVKVDVTGL 71 (453)
T ss_dssp EE---SS-EEEEEE--SBGGTB-------SS-EEEEEEEESSTTSSSEEEEEEEEE----------GGGTTEEEEEE-S-
T ss_pred ccCCCCCEEEEEEEecCcccCCCCC----CCcEEEEEEEECCCCccceEEecceec---------ccCCCeEeecccCCC
Confidence 4667 56888899876521110011 124456666655544332222222211 112457799999999
Q ss_pred CCCCEEEEEeecCCCCCccceeEEEcCCCCCCCCcCeEEEEEecCCCCCChHHHHHHHHh-CCCCEEEEcCCcccccccc
Q 014557 173 KPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMIS-NRPDLILLVGDVTYANLYL 251 (422)
Q Consensus 173 ~p~T~Y~Y~v~~~~~~~~s~~~~F~T~p~~~~~~~~~rf~v~gD~~~~~~~~~~~~~l~~-~~pDfvl~~GDl~yad~~~ 251 (422)
+|+|+|+||+..++....+.+++|||+|..... .+||+++||.+.......+++++.+ .+|||+||+||.+|++..
T Consensus 72 ~p~t~Y~Y~~~~~~~~~~s~~g~~rT~p~~~~~--~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~- 148 (453)
T PF09423_consen 72 QPGTRYYYRFVVDGGGQTSPVGRFRTAPDGDPD--PFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGG- 148 (453)
T ss_dssp -TT-EEEEEEEE--TTEE---EEEE--TT-------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----T-
T ss_pred CCCceEEEEEEEecCCCCCCceEEEcCCCCCCC--ceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCC-
Confidence 999999999998644578999999999765443 6999999999986666788999998 699999999999998741
Q ss_pred cCCCCCCcccc---------cC--CCCCCccchhhHHHHHH--HhhhhhhcCCcEEEecCCccccccccc----------
Q 014557 252 TNGTGSDCYAC---------SF--ANSPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN---------- 308 (422)
Q Consensus 252 ~~g~~~~~y~~---------~~--~~~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~---------- 308 (422)
..|.. .. ......+.|+.+|..+. ..++.+.+.+|+++++.+||+.++...
T Consensus 149 ------~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~ 222 (453)
T PF09423_consen 149 ------GGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTS 222 (453)
T ss_dssp ------TSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---H
T ss_pred ------cccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccc
Confidence 01100 00 11234567888887664 457788889999999999999765431
Q ss_pred --------ccchhcccccCCCCC-CCCCCCcceEEEEeCc-EEEEEEeccccCC---------------------CCHhH
Q 014557 309 --------RTFVAYTSRFAFPSK-ESGSLSKFYYSFNAGG-IHFLMLAAYVSFD---------------------KSGDQ 357 (422)
Q Consensus 309 --------~~~~~y~~~f~~P~~-~~~~~~~~yysf~~g~-v~fi~Ldt~~~~~---------------------~~~~Q 357 (422)
..+.+|.+....... ..+.....|++|.+|+ +.|++||++.... .+.+|
T Consensus 223 ~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q 302 (453)
T PF09423_consen 223 GDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQ 302 (453)
T ss_dssp HHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHH
T ss_pred cchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHH
Confidence 011223322222111 1123456799999999 9999999864221 26899
Q ss_pred HHHHHHHHHhcccCCCCEEEEEeCCCcccCC-----------cccccchHHHHHHHHHHHHHcCCc--EEEEccccC
Q 014557 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTY-----------KAHYREAECMRVAMEDLLYKYGVD--VVFNGHVSE 421 (422)
Q Consensus 358 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~-----------~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~ 421 (422)
++||++.|++. .++|+|+..-.|+.... ...+......|++|.++|.+.++. ++|+|.+|.
T Consensus 303 ~~wL~~~L~~s---~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~ 376 (453)
T PF09423_consen 303 WDWLEDWLASS---QATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHA 376 (453)
T ss_dssp HHHHHHHHHH-----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSS
T ss_pred HHHHHHHHhcC---CCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcch
Confidence 99999999984 47899999888775432 122344456789999999998875 889999996
No 5
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.94 E-value=4.5e-26 Score=224.59 Aligned_cols=304 Identities=20% Similarity=0.270 Sum_probs=211.4
Q ss_pred cCCC-CcEEEEEEcCCCcCcCCCCCCCC-CCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeEEEEEeCC
Q 014557 94 SSAH-DSVWISWITGEFQIGNNLKPLDP-KSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIHHVRLTG 171 (422)
Q Consensus 94 ~~~~-~~~~v~W~T~~~~~g~~~~~~~p-~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h~v~l~g 171 (422)
++|| ....|-|..-++. |++- ..+...+++++.++..+.+..|+... .-.+.+.+||.++|
T Consensus 45 SGDp~~~svviWTRl~P~------p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a-----------~p~~dhtv~v~~~g 107 (522)
T COG3540 45 SGDPTATSVVIWTRLDPE------PLNGGRPVPVIWEVSTDENFSNIVRKGTVIA-----------SPELDHTVHVDLRG 107 (522)
T ss_pred cCCCCCCeEEEEEccCCc------cccCCCCcceEEEecCCccHHHHHhcCCccC-----------CcccCceEEEeccC
Confidence 4678 5688999987753 2221 13456677777776554443333211 11245679999999
Q ss_pred CCCCCEEEEEeecCCCCCccceeEEEcCCCCCCCCcCeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccc
Q 014557 172 LKPDTLYHYQCGDPSIPAMSGTYCFRTMPDSSSTSYPSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYL 251 (422)
Q Consensus 172 L~p~T~Y~Y~v~~~~~~~~s~~~~F~T~p~~~~~~~~~rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~ 251 (422)
|+|++.|+||+..++ ..|.+++|||+|..+....-++|+..++.|...+...+.++|.+.+||||||.||.+|+++..
T Consensus 108 L~P~~~yfYRf~~~~--~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~ 185 (522)
T COG3540 108 LSPDQDYFYRFKAGD--ERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPI 185 (522)
T ss_pred CCCCceEEEEEeeCC--ccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCc
Confidence 999999999998887 688999999999987654445666666667766777889999999999999999999997632
Q ss_pred cCCCCCCcccc-cCCC-----CCCccchhhHHHHHH--HhhhhhhcCCcEEEecCCccccccccc---------------
Q 014557 252 TNGTGSDCYAC-SFAN-----SPIHETYQPRWDYWG--RYMQPVLSKVPIMVVEGNHEYEEQAEN--------------- 308 (422)
Q Consensus 252 ~~g~~~~~y~~-~~~~-----~~~~e~y~~~wd~~~--~~l~~l~~~iP~~~v~GNHD~~~~~~~--------------- 308 (422)
..-.....+.+ .-++ ....++|+.+|..++ ..++...+..||++.|.+||..++...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~ 265 (522)
T COG3540 186 PDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFV 265 (522)
T ss_pred ccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHH
Confidence 11000000111 1111 234668999998876 457888899999999999999866321
Q ss_pred ----ccchhcccccCCCCCCCC--CCCcceEEEEeCc-EEEEEEeccccC------C----------------CCHhHHH
Q 014557 309 ----RTFVAYTSRFAFPSKESG--SLSKFYYSFNAGG-IHFLMLAAYVSF------D----------------KSGDQYK 359 (422)
Q Consensus 309 ----~~~~~y~~~f~~P~~~~~--~~~~~yysf~~g~-v~fi~Ldt~~~~------~----------------~~~~Q~~ 359 (422)
..+++|.+ .||...+. .....|.+|.+|+ +.|.+||+.... + .+.+|.+
T Consensus 266 ~r~a~A~qAyyE--~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~Qeq 343 (522)
T COG3540 266 LRAAAARQAYYE--HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQ 343 (522)
T ss_pred HHHHHHHHHHHH--hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHH
Confidence 11233333 34544322 2357899999998 789999986433 1 1789999
Q ss_pred HHHHHHHhcccCCCCEEEEEeCCCcccCC---c----------ccccchHHHHHHHHHHHHHcCCc--EEEEccccC
Q 014557 360 WLEEDLANVEREVTPWLVATWHAPWYSTY---K----------AHYREAECMRVAMEDLLYKYGVD--VVFNGHVSE 421 (422)
Q Consensus 360 WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~---~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~ 421 (422)
||++.|.+ +++.|.|+..-.|+--.. . ..+.....-|+.+..++.+.++. ++|+|.+|.
T Consensus 344 WLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~ 417 (522)
T COG3540 344 WLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHY 417 (522)
T ss_pred HHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHH
Confidence 99999998 578899998888763211 1 11122334588999999999876 899999995
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.94 E-value=8.8e-26 Score=216.80 Aligned_cols=186 Identities=24% Similarity=0.403 Sum_probs=134.4
Q ss_pred CeEEEEEecCCCCCC-----------------hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCC
Q 014557 208 PSRIAIVGDVGLTYN-----------------TTSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSP 268 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~-----------------~~~~~~~l~~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~ 268 (422)
+++|+++||+|.+.. ....++.+.+. +||||+++||+++. +..
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~------~~~------------ 65 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNA------MPG------------ 65 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCC------Ccc------------
Confidence 799999999998731 12345555555 89999999999963 210
Q ss_pred CccchhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEecc
Q 014557 269 IHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAY 348 (422)
Q Consensus 269 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~ 348 (422)
.+..+.+|+.+.+.++.+...+|+++++||||+........+..|...| +..||+|++|+++||+||+.
T Consensus 66 -~~~~~~~~~~~~~~~~~~~~~vp~~~i~GNHD~~~~~~~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~ 134 (262)
T cd07395 66 -DELRERQVSDLKDVLSLLDPDIPLVCVCGNHDVGNTPTEESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQ 134 (262)
T ss_pred -hhhHHHHHHHHHHHHhhccCCCcEEEeCCCCCCCCCCChhHHHHHHHHh----------CCcceEEEECCEEEEEeccc
Confidence 0111245777777777776689999999999986432222233444434 24589999999999999996
Q ss_pred ccC------CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccc----cchHHHHHHHHHHHHHcCCcEEEEcc
Q 014557 349 VSF------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHY----REAECMRVAMEDLLYKYGVDVVFNGH 418 (422)
Q Consensus 349 ~~~------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~----~~~~~~r~~l~~ll~~~~VdlvlsGH 418 (422)
... ....+|++||+++|+++++.+.+++||++|+|++....... ......+++|.++|++++|+++||||
T Consensus 135 ~~~~~~~~~~~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH 214 (262)
T cd07395 135 LFFDPSEVPELAQAQDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGH 214 (262)
T ss_pred cccCccccccchHHHHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECc
Confidence 432 23579999999999998645567899999999985432211 12245678999999999999999999
Q ss_pred ccCC
Q 014557 419 VSES 422 (422)
Q Consensus 419 ~H~y 422 (422)
+|.+
T Consensus 215 ~H~~ 218 (262)
T cd07395 215 YHRN 218 (262)
T ss_pred cccC
Confidence 9974
No 7
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.94 E-value=1.1e-25 Score=217.77 Aligned_cols=182 Identities=25% Similarity=0.443 Sum_probs=127.0
Q ss_pred eEEEEEecCCCC--CChHHH---HHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHH-HHHH
Q 014557 209 SRIAIVGDVGLT--YNTTST---VSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRW-DYWG 281 (422)
Q Consensus 209 ~rf~v~gD~~~~--~~~~~~---~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~w-d~~~ 281 (422)
++|+++||+|.. .+...+ +.++. +.+|||||++||++|+++... .+..+| +.|.
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~-------------------~~~~~~~~~~~ 61 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGS-------------------VDDPRFETTFE 61 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCC-------------------CcchHHHHHHH
Confidence 489999999985 222222 23333 369999999999998653210 112333 3345
Q ss_pred HhhhhhhcCCcEEEecCCcccccccccc-cchh--cccccCCCCCCCCCCCcceEEEEeC------cEEEEEEeccccC-
Q 014557 282 RYMQPVLSKVPIMVVEGNHEYEEQAENR-TFVA--YTSRFAFPSKESGSLSKFYYSFNAG------GIHFLMLAAYVSF- 351 (422)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~-~~~~--y~~~f~~P~~~~~~~~~~yysf~~g------~v~fi~Ldt~~~~- 351 (422)
+.++.+..++|+++++||||........ .+.. +..++.+ ...||+|+++ +++||+|||....
T Consensus 62 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--------~~~~y~~~~~~~~~~~~~~~i~LDt~~~~~ 133 (277)
T cd07378 62 DVYSAPSLQVPWYLVLGNHDYSGNVSAQIDYTKRPNSPRWTM--------PAYYYRVSFPFPSSDTTVEFIMIDTVPLCG 133 (277)
T ss_pred HHccchhhcCCeEEecCCcccCCCchheeehhccCCCCCccC--------cchheEEEeecCCCCCEEEEEEEeChhHcC
Confidence 5555555689999999999987432111 0111 1223333 3579999998 7999999997531
Q ss_pred --------------CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEc
Q 014557 352 --------------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNG 417 (422)
Q Consensus 352 --------------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsG 417 (422)
..+.+|++||+++|++.+. +|+||++|+|+++..... .....++.|++++++++|+++|+|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Q~~wL~~~L~~~~~---~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~G 208 (277)
T cd07378 134 NSDDIASPYGPPNGKLAEEQLAWLEKTLAASTA---DWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSG 208 (277)
T ss_pred ccccccccccCcchhhHHHHHHHHHHHHHhcCC---CeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeC
Confidence 1368999999999998642 799999999998764322 124668899999999999999999
Q ss_pred cccCC
Q 014557 418 HVSES 422 (422)
Q Consensus 418 H~H~y 422 (422)
|+|.+
T Consensus 209 H~H~~ 213 (277)
T cd07378 209 HDHNL 213 (277)
T ss_pred Ccccc
Confidence 99975
No 8
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.93 E-value=1.1e-24 Score=216.11 Aligned_cols=184 Identities=15% Similarity=0.316 Sum_probs=129.2
Q ss_pred CeEEEEEecCCCCCChHHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHH-HH
Q 014557 208 PSRIAIVGDVGLTYNTTSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY-WG 281 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~~~~~~l~-----~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~-~~ 281 (422)
.+||+++||+|.+...+..+++.+ +.++|||+.+||.. .++.. + ...++|.. |.
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~--s-----------------v~Dp~f~~~FE 85 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVD--G-----------------LNDPKWKHCFE 85 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCC--C-----------------ccchhHHhhHh
Confidence 689999999997655554443332 36899999999998 43321 1 11356665 33
Q ss_pred Hhhhhhh--cCCcEEEecCCccccccccccc--ch------------h------cccccCCCCCCCCCCCcceEEE----
Q 014557 282 RYMQPVL--SKVPIMVVEGNHEYEEQAENRT--FV------------A------YTSRFAFPSKESGSLSKFYYSF---- 335 (422)
Q Consensus 282 ~~l~~l~--~~iP~~~v~GNHD~~~~~~~~~--~~------------~------y~~~f~~P~~~~~~~~~~yysf---- 335 (422)
+...... ..+||++|+||||+..+...+. +. . ...||.||. .||.+
T Consensus 86 ~vY~~~s~~L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f 157 (394)
T PTZ00422 86 NVYSEESGDMQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHF 157 (394)
T ss_pred hhccCcchhhCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeee
Confidence 4444433 5799999999999875543221 11 1 125777773 57754
Q ss_pred Ee-------------CcEEEEEEecccc-----C-CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchH
Q 014557 336 NA-------------GGIHFLMLAAYVS-----F-DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAE 396 (422)
Q Consensus 336 ~~-------------g~v~fi~Ldt~~~-----~-~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~ 396 (422)
.. ..+.||+|||... + .....|++||+++|+.+ ++.++|+||++|||+|++... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~h--g~~~ 234 (394)
T PTZ00422 158 TDTSGPSLLKSGHKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSS--KGDS 234 (394)
T ss_pred ecccccccccccCCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCC--CCCH
Confidence 22 2289999999632 1 12578999999999754 356789999999999998642 2345
Q ss_pred HHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 397 CMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 397 ~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
++++.|++||++|+||++|+||+|++
T Consensus 235 ~L~~~L~PLL~ky~VdlYisGHDH~l 260 (394)
T PTZ00422 235 YLSYYLLPLLKDAQVDLYISGYDRNM 260 (394)
T ss_pred HHHHHHHHHHHHcCcCEEEEccccce
Confidence 78899999999999999999999975
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.91 E-value=2.4e-23 Score=200.60 Aligned_cols=179 Identities=21% Similarity=0.307 Sum_probs=123.0
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchh
Q 014557 209 SRIAIVGDVGLTYNT--------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~--------------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~ 274 (422)
|||+++||+|..... .++++++++.+||+||++||+++. +.. ..+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~------~~~---------------~~~ 59 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG------DNA---------------RAE 59 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC------CCc---------------hHH
Confidence 699999999966421 234666767789999999999952 210 012
Q ss_pred hHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEecccc----
Q 014557 275 PRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS---- 350 (422)
Q Consensus 275 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~---- 350 (422)
..|+.+.+.+..+ ++|+++++||||....... .+. ..+ . ...+..||+|+.++++||+||+...
T Consensus 60 ~~~~~~~~~l~~l--~~p~~~v~GNHD~~~~~~~-~~~---~~~--~----~~~~~~yysf~~~~~~~i~lds~~~~~~~ 127 (267)
T cd07396 60 EALDAVLAILDRL--KGPVHHVLGNHDLYNPSRE-YLL---LYT--L----LGLGAPYYSFSPGGIRFIVLDGYDISALG 127 (267)
T ss_pred HHHHHHHHHHHhc--CCCEEEecCccccccccHh-hhh---ccc--c----cCCCCceEEEecCCcEEEEEeCCcccccc
Confidence 4566666666665 6899999999998643211 110 011 0 1234579999999999999998531
Q ss_pred ------------------------------CCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHH
Q 014557 351 ------------------------------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRV 400 (422)
Q Consensus 351 ------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~ 400 (422)
...+.+|++||+++|++...+. .++||++|+|++...... ......++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~~~-~~viV~~Hhp~~~~~~~~-~~~~~~~~ 205 (267)
T cd07396 128 RPEDTPKAENADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADANG-EKVIIFSHFPLHPESTSP-HGLLWNHE 205 (267)
T ss_pred CCCCChhhhhHHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHhcC-CeEEEEEeccCCCCCCCc-cccccCHH
Confidence 1235899999999999875332 358999999987643211 11111257
Q ss_pred HHHHHHHHc-CCcEEEEccccCC
Q 014557 401 AMEDLLYKY-GVDVVFNGHVSES 422 (422)
Q Consensus 401 ~l~~ll~~~-~VdlvlsGH~H~y 422 (422)
.+.++++++ +|+++|+||+|.+
T Consensus 206 ~~~~ll~~~~~V~~v~~GH~H~~ 228 (267)
T cd07396 206 EVLSILRAYGCVKACISGHDHEG 228 (267)
T ss_pred HHHHHHHhCCCEEEEEcCCcCCC
Confidence 788999996 8999999999974
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.88 E-value=9.5e-22 Score=185.97 Aligned_cols=173 Identities=22% Similarity=0.360 Sum_probs=120.8
Q ss_pred EEEEEecCCCCCCh-------------HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchh
Q 014557 210 RIAIVGDVGLTYNT-------------TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (422)
Q Consensus 210 rf~v~gD~~~~~~~-------------~~~~~~l~~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~ 274 (422)
||+++||+|.+... .++++.+.+. +||+||++||+++. +. .
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~------~~------------------~ 56 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD------GS------------------P 56 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC------CC------------------H
Confidence 69999999988531 2345556565 89999999999952 22 2
Q ss_pred hHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccC---
Q 014557 275 PRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF--- 351 (422)
Q Consensus 275 ~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~--- 351 (422)
..|..+.+.++.+ ++|++.++||||.... +...|.... ......+|+|+.++++||+||+....
T Consensus 57 ~~~~~~~~~l~~~--~~p~~~v~GNHD~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~~~i~lds~~~~~~~ 123 (240)
T cd07402 57 ESYERLRELLAAL--PIPVYLLPGNHDDRAA--------MRAVFPELP---PAPGFVQYVVDLGGWRLILLDSSVPGQHG 123 (240)
T ss_pred HHHHHHHHHHhhc--CCCEEEeCCCCCCHHH--------HHHhhcccc---ccccccceeEecCCEEEEEEeCCCCCCcC
Confidence 3455666667666 7999999999997421 112221110 02345688999999999999986432
Q ss_pred -CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCccccc-chHHHHHHHHHHHHHc-CCcEEEEccccCC
Q 014557 352 -DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMEDLLYKY-GVDVVFNGHVSES 422 (422)
Q Consensus 352 -~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~-~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 422 (422)
....+|++||++.|++.. ..++|+++|+|++........ .....++.+.+++.++ +|+++|+||+|..
T Consensus 124 ~~~~~~ql~wL~~~L~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~ 194 (240)
T cd07402 124 GELCAAQLDWLEAALAEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRP 194 (240)
T ss_pred CEECHHHHHHHHHHHHhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCch
Confidence 236889999999999874 234777888888664321111 1112267899999999 9999999999963
No 11
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=2.3e-21 Score=185.55 Aligned_cols=187 Identities=19% Similarity=0.249 Sum_probs=121.1
Q ss_pred EEEEecCCCCCCh--------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHH
Q 014557 211 IAIVGDVGLTYNT--------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (422)
Q Consensus 211 f~v~gD~~~~~~~--------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~ 282 (422)
|++++|+|.+... ..+++.+.+.+||+++++||++.... ..+. -...++.+|+.|.+
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~--~~~~-------------~~~~~~~~~~~~~~ 66 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKT--GNKL-------------PSYQYQEEWQKYYN 66 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccc--cCCC-------------cccccHHHHHHHHH
Confidence 7899999987432 11345566789999999999995311 1110 01134567888887
Q ss_pred hhhhhh--cCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEE--EEeCcEEEEEEecccc--------
Q 014557 283 YMQPVL--SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYS--FNAGGIHFLMLAAYVS-------- 350 (422)
Q Consensus 283 ~l~~l~--~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yys--f~~g~v~fi~Ldt~~~-------- 350 (422)
.+.... ...|++.++||||............|..+|... ......+|. ++.|+++||+||+...
T Consensus 67 ~~~~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~y~~~----~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~ 142 (256)
T cd07401 67 ILKESSVINKEKWFDIRGNHDLFNIPSLDSENNYYRKYSAT----GRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFN 142 (256)
T ss_pred HHHHhCCCCcceEEEeCCCCCcCCCCCccchhhHHHHhhee----cCCCccceEEEecCCCEEEEEEcCccCCCCCCCCc
Confidence 776542 268999999999996432221222222222100 011123333 3458999999999642
Q ss_pred --CCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 351 --FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 351 --~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
.....+|++||+++|++.. +.+++||++|+|+....... . ...+ .+.++|++++|+++||||+|.+
T Consensus 143 ~~g~l~~~ql~wL~~~L~~~~--~~~~~IV~~HhP~~~~~~~~-~--~~~~-~~~~ll~~~~v~~vl~GH~H~~ 210 (256)
T cd07401 143 FFGSLDKKLLDRLEKELEKST--NSNYTIWFGHYPTSTIISPS-A--KSSS-KFKDLLKKYNVTAYLCGHLHPL 210 (256)
T ss_pred eeccCCHHHHHHHHHHHHhcc--cCCeEEEEEcccchhccCCC-c--chhH-HHHHHHHhcCCcEEEeCCccCC
Confidence 2235899999999999864 34579999999986532211 1 1122 3899999999999999999974
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.86 E-value=1.3e-20 Score=182.22 Aligned_cols=172 Identities=22% Similarity=0.317 Sum_probs=110.6
Q ss_pred CeEEEEEecCCCCC---------Ch----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccc
Q 014557 208 PSRIAIVGDVGLTY---------NT----TSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHET 272 (422)
Q Consensus 208 ~~rf~v~gD~~~~~---------~~----~~~~~~l~~--~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~ 272 (422)
++||++++|+|+.. +. .++++++.+ .+|||||++||++. ++.
T Consensus 14 ~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~------~~~----------------- 70 (275)
T PRK11148 14 RVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ------DHS----------------- 70 (275)
T ss_pred CEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC------CCC-----------------
Confidence 79999999999742 11 234556554 36999999999994 222
Q ss_pred hhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccC-
Q 014557 273 YQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF- 351 (422)
Q Consensus 273 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~- 351 (422)
...+..+.+.++.+ ++|+++++||||.... +..+.....+ ...++.+..++++||+||+....
T Consensus 71 -~~~~~~~~~~l~~l--~~Pv~~v~GNHD~~~~-----~~~~~~~~~~--------~~~~~~~~~~~~~~i~Lds~~~g~ 134 (275)
T PRK11148 71 -SEAYQHFAEGIAPL--RKPCVWLPGNHDFQPA-----MYSALQDAGI--------SPAKHVLIGEHWQILLLDSQVFGV 134 (275)
T ss_pred -HHHHHHHHHHHhhc--CCcEEEeCCCCCChHH-----HHHHHhhcCC--------CccceEEecCCEEEEEecCCCCCC
Confidence 13445566666666 6899999999998421 1111111111 11233344556999999996422
Q ss_pred ---CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCccccc-chHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 352 ---DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-EAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 352 ---~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~-~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
..+.+|++||+++|++... .+-+|+++|+|+.... .+.. ......++|.+++++| +|+++|+||+|.
T Consensus 135 ~~G~l~~~ql~wL~~~L~~~~~--~~~vv~~hH~P~~~~~-~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~ 206 (275)
T PRK11148 135 PHGELSEYQLEWLERKLADAPE--RHTLVLLHHHPLPAGC-AWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQ 206 (275)
T ss_pred cCCEeCHHHHHHHHHHHhhCCC--CCeEEEEcCCCCCCCc-chhhccCCCCHHHHHHHHhcCCCceEEEecccCh
Confidence 2368999999999998743 2225555555654321 1111 0111246899999998 899999999996
No 13
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.84 E-value=2e-20 Score=172.61 Aligned_cols=182 Identities=21% Similarity=0.320 Sum_probs=120.3
Q ss_pred CeEEEEEecCCCCC--ChHHH---HHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHH-H
Q 014557 208 PSRIAIVGDVGLTY--NTTST---VSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY-W 280 (422)
Q Consensus 208 ~~rf~v~gD~~~~~--~~~~~---~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~-~ 280 (422)
.++|+++||+|... |.... ...|. +.+.||||-+||.+|.++..+.. .+++.. |
T Consensus 43 slsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-------------------Dp~Fq~sF 103 (336)
T KOG2679|consen 43 SLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-------------------DPRFQDSF 103 (336)
T ss_pred ceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-------------------ChhHHhhh
Confidence 69999999999542 22222 23333 36899999999999976543221 122222 2
Q ss_pred HHhhhhhhcCCcEEEecCCcccccccccc---cchhcccccCCCCCCCCCCCcceE--E----EEeCcEEEEEEecccc-
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYEEQAENR---TFVAYTSRFAFPSKESGSLSKFYY--S----FNAGGIHFLMLAAYVS- 350 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~---~~~~y~~~f~~P~~~~~~~~~~yy--s----f~~g~v~fi~Ldt~~~- 350 (422)
.+....-....||+.+.||||+.++...+ .+.....||..|.. || + +..-++.++|+|+...
T Consensus 104 ~nIYT~pSLQkpWy~vlGNHDyrGnV~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~ 175 (336)
T KOG2679|consen 104 ENIYTAPSLQKPWYSVLGNHDYRGNVEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLC 175 (336)
T ss_pred hhcccCcccccchhhhccCccccCchhhhhhHHHHhhccceecccH--------Hhhcceeeeeeccccccchhhheecc
Confidence 22222222245999999999998765432 23444556665531 21 1 1112345555554321
Q ss_pred ------CC-------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEc
Q 014557 351 ------FD-------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNG 417 (422)
Q Consensus 351 ------~~-------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsG 417 (422)
+. ....++.||+..|++ +.++|+||.+|+|+.+.. +.....++++.+.|||++++||++++|
T Consensus 176 ~~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~--~HG~T~eL~~~LlPiL~~n~VdlY~nG 250 (336)
T KOG2679|consen 176 TDDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAG--HHGPTKELEKQLLPILEANGVDLYING 250 (336)
T ss_pred cccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhh--ccCChHHHHHHHHHHHHhcCCcEEEec
Confidence 11 136788999999998 467899999999998753 334577899999999999999999999
Q ss_pred cccC
Q 014557 418 HVSE 421 (422)
Q Consensus 418 H~H~ 421 (422)
|+|+
T Consensus 251 HDHc 254 (336)
T KOG2679|consen 251 HDHC 254 (336)
T ss_pred chhh
Confidence 9996
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.83 E-value=5.8e-20 Score=171.31 Aligned_cols=145 Identities=19% Similarity=0.245 Sum_probs=104.6
Q ss_pred eEEEEEecCCCCCCh---------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHH
Q 014557 209 SRIAIVGDVGLTYNT---------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY 279 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~---------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~ 279 (422)
|||++++|+|..... ..+++.+.+.+||+|+++||+++. +. ...+|+.
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~------~~-----------------~~~~~~~ 57 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDD------GD-----------------NDAEWEA 57 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCC------CC-----------------CHHHHHH
Confidence 689999999975331 123344445789999999999952 11 0247888
Q ss_pred HHHhhhhhh-cCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHH
Q 014557 280 WGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQY 358 (422)
Q Consensus 280 ~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~ 358 (422)
+.+.++.+. ..+|+++++||||. ++.+|+ ....+|+
T Consensus 58 ~~~~~~~l~~~~~p~~~~~GNHD~---------------------------------------~~~ld~----~~~~~ql 94 (214)
T cd07399 58 ADKAFARLDKAGIPYSVLAGNHDL---------------------------------------VLALEF----GPRDEVL 94 (214)
T ss_pred HHHHHHHHHHcCCcEEEECCCCcc---------------------------------------hhhCCC----CCCHHHH
Confidence 888888885 67999999999992 223332 2358999
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccc-----hHHHHHHHHHHHHHc-CCcEEEEccccCC
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-----AECMRVAMEDLLYKY-GVDVVFNGHVSES 422 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~-----~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 422 (422)
+||++.|++.+. +++|+++|+|++......... .+..++.|+++++++ +|++||+||+|.+
T Consensus 95 ~WL~~~L~~~~~---~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~ 161 (214)
T cd07399 95 QWANEVLKKHPD---RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGA 161 (214)
T ss_pred HHHHHHHHHCCC---CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCC
Confidence 999999998642 348899999988654221111 123456788999999 7999999999974
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.80 E-value=6.9e-19 Score=172.01 Aligned_cols=188 Identities=19% Similarity=0.268 Sum_probs=122.9
Q ss_pred EEecCCCCCC---hHHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh--HHHHHHHhhh
Q 014557 213 IVGDVGLTYN---TTSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP--RWDYWGRYMQ 285 (422)
Q Consensus 213 v~gD~~~~~~---~~~~~~~l~~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~--~wd~~~~~l~ 285 (422)
-+|+.++... ..++++.+.+. +|||||++||++..+.+.. .. ..+. .+..+.+.++
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~----------------~~-~~~~~~~~~~~~~~l~ 104 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQ----------------TP-ETLVLISISNLTSLLK 104 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhh----------------ch-hHHHHHHHHHHHHHHH
Confidence 4566664422 13466777766 8999999999996432100 00 0111 2455666677
Q ss_pred hhhcCCcEEEecCCccccccccc-------ccchhcccccC--CCCCC-CCCCCcceEEEE-eCcEEEEEEeccccC---
Q 014557 286 PVLSKVPIMVVEGNHEYEEQAEN-------RTFVAYTSRFA--FPSKE-SGSLSKFYYSFN-AGGIHFLMLAAYVSF--- 351 (422)
Q Consensus 286 ~l~~~iP~~~v~GNHD~~~~~~~-------~~~~~y~~~f~--~P~~~-~~~~~~~yysf~-~g~v~fi~Ldt~~~~--- 351 (422)
.....+|+++++||||....... ..+..+...|. ++.+. .....+.||++. .++++||+|||....
T Consensus 105 ~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~ 184 (296)
T cd00842 105 KAFPDTPVYPALGNHDSYPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKN 184 (296)
T ss_pred HhCCCCCEEEcCCCCCCCcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccC
Confidence 77788999999999998754211 11222222221 22211 112346789988 889999999996432
Q ss_pred --------CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcC--CcEEEEccccC
Q 014557 352 --------DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG--VDVVFNGHVSE 421 (422)
Q Consensus 352 --------~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~ 421 (422)
....+|++||+++|+++++++. .++|++|+|+....... ....++.|.+++++|+ |.++|+||+|.
T Consensus 185 ~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~~-~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~ 260 (296)
T cd00842 185 FWLLGSNETDPAGQLQWLEDELQEAEQAGE-KVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHR 260 (296)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHHHHHCCC-eEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeeccccc
Confidence 1247899999999999864433 47778899987643221 1345688999999996 78899999996
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.77 E-value=1.1e-18 Score=152.72 Aligned_cols=190 Identities=22% Similarity=0.266 Sum_probs=101.8
Q ss_pred eEEEEEecCCCCCChH-----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHH-H
Q 014557 209 SRIAIVGDVGLTYNTT-----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG-R 282 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~~-----~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~-~ 282 (422)
+||+++||+|...... .......+.++|+||++||+++.. . . ...+.... .
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~------~----------------~-~~~~~~~~~~ 57 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGG------N----------------P-SEEWRAQFWF 57 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSS------S----------------H-HHHHHHHHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccc------c----------------c-cccchhhhcc
Confidence 6999999999985533 223334468999999999999632 1 0 11111111 1
Q ss_pred hhhhhhcCCcEEEecCCcccccccccccchhcccccC-CCCCC-CCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHH
Q 014557 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFA-FPSKE-SGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKW 360 (422)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~-~P~~~-~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~W 360 (422)
........+|+++++||||.................. ..... ....... .........+..............+..|
T Consensus 58 ~~~~~~~~~~~~~~~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (200)
T PF00149_consen 58 FIRLLNPKIPVYFILGNHDYYSGNSFYGFYDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEW 136 (200)
T ss_dssp HHHHHHTTTTEEEEE-TTSSHHHHHHHHHHHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHH
T ss_pred chhhhhccccccccccccccceeccccccccccccccccccccccccCcce-eeecccccccccccccccccccccchhc
Confidence 2334466899999999999975322111111110000 00000 0000000 1222222222222222211222333333
Q ss_pred HHHHHHhcccCCCCEEEEEeCCCcccCCccccc--chHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYR--EAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 361 L~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
+...+....+...+++||++|+|++........ .....++.+..++++++|+++|+||+|.|
T Consensus 137 ~~~~~~~~~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 137 WLWLLLLLEAKNDDPVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHHHHHHEEEESEEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ccccccccccccccceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 333333333345678999999999876543211 01235688899999999999999999986
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.73 E-value=4.8e-17 Score=155.46 Aligned_cols=169 Identities=16% Similarity=0.190 Sum_probs=107.4
Q ss_pred HHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 225 STVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 225 ~~~~~l~~-~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
+.++.+.+ .+||+|+++||++.. |... ..+.+.+.++.|.+.+.++...+|++.++||||+.
T Consensus 35 ~~~~~~~~~l~PD~vv~lGDL~d~------G~~~-----------~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig 97 (257)
T cd08163 35 RNWRYMQKQLKPDSTIFLGDLFDG------GRDW-----------ADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIG 97 (257)
T ss_pred HHHHHHHHhcCCCEEEEecccccC------CeeC-----------cHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccC
Confidence 34555553 589999999999852 3310 00112222334444444443358999999999986
Q ss_pred ccccc--ccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccC-----CCCHhHHHHHHHHHHhcccCCCCEE
Q 014557 304 EQAEN--RTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSF-----DKSGDQYKWLEEDLANVEREVTPWL 376 (422)
Q Consensus 304 ~~~~~--~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~ 376 (422)
..... .....|.+.|. ..+++|++|+++||+||+.... ....+|.+||++.|+..... . .+
T Consensus 98 ~~~~~~~~~~~rf~~~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~~~-~-p~ 165 (257)
T cd08163 98 FGNGVVLPVRQRFEKYFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKVKS-K-PR 165 (257)
T ss_pred CCCCCCHHHHHHHHHHhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccCCC-C-cE
Confidence 43211 12345555552 2468899999999999996321 23567999999999875432 2 37
Q ss_pred EEEeCCCcccCCccccc---ch------------H-HH-HHHHHHHHHHcCCcEEEEccccCC
Q 014557 377 VATWHAPWYSTYKAHYR---EA------------E-CM-RVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 377 Iv~~H~P~y~~~~~~~~---~~------------~-~~-r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
|+++|+|+|........ +. + .+ .+.-..||++.++.+||+||+|.|
T Consensus 166 ILl~H~Plyr~~~~~cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~ 228 (257)
T cd08163 166 ILLTHVPLYRPPNTSCGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDY 228 (257)
T ss_pred EEEeccccccCCCCCCCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcc
Confidence 99999999864321100 00 0 11 244457888889999999999976
No 18
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.70 E-value=1.6e-16 Score=150.66 Aligned_cols=175 Identities=15% Similarity=0.200 Sum_probs=106.5
Q ss_pred EEEEEecCCCCCCh---H----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHH
Q 014557 210 RIAIVGDVGLTYNT---T----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (422)
Q Consensus 210 rf~v~gD~~~~~~~---~----~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~ 282 (422)
||++++|+|...+. . ..++.+.+.++|+|+++||++.. . .+...+.+
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~------~--------------------~~~~~~~~ 54 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISND------F--------------------QRSLPFIE 54 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccc------h--------------------hhHHHHHH
Confidence 68999999975322 2 34555667889999999999941 0 01122333
Q ss_pred hhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCC----------
Q 014557 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFD---------- 352 (422)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~---------- 352 (422)
.+..+ ..+|+++++||||...... +..+.+.+. + ....+.++.+..++++|++++.+.++.
T Consensus 55 ~l~~~-~~~pv~~v~GNHD~~~~~~---~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~ 125 (239)
T TIGR03729 55 KLQEL-KGIKVTFNAGNHDMLKDLT---YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEI 125 (239)
T ss_pred HHHHh-cCCcEEEECCCCCCCCCCC---HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHH
Confidence 33332 4689999999999852211 111211110 0 011223333445778999988543321
Q ss_pred ---------------------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCc------ccccch--HHHHHHHH
Q 014557 353 ---------------------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYK------AHYREA--ECMRVAME 403 (422)
Q Consensus 353 ---------------------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~------~~~~~~--~~~r~~l~ 403 (422)
...+|++||++.|++...+ + +|+++|+|+..... ..+... ....+.+.
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~--~-~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~ 202 (239)
T TIGR03729 126 LRWKKSFWFDRRIKRPMSDPERTAIVLKQLKKQLNQLDNK--Q-VIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFG 202 (239)
T ss_pred HHhhhcEEeecccCCCCChHHHHHHHHHHHHHHHHhcCCC--C-EEEEEcccchHHHhcCCCCCcchhhhhhccChHHHH
Confidence 1367899999999887432 2 67777887644211 111111 11247899
Q ss_pred HHHHHcCCcEEEEccccCC
Q 014557 404 DLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 404 ~ll~~~~VdlvlsGH~H~y 422 (422)
+++++++|+++|+||+|..
T Consensus 203 ~li~~~~v~~~i~GH~H~~ 221 (239)
T TIGR03729 203 QLLVKYEIKDVIFGHLHRR 221 (239)
T ss_pred HHHHHhCCCEEEECCccCC
Confidence 9999999999999999963
No 19
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.67 E-value=1.3e-15 Score=138.16 Aligned_cols=165 Identities=19% Similarity=0.208 Sum_probs=101.0
Q ss_pred EEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcC
Q 014557 211 IAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSK 290 (422)
Q Consensus 211 f~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~ 290 (422)
|+++||+|...+.... ..+.+.++|+||++||+++. +. ......+ +.++.+ +
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~------~~------------------~~~~~~~-~~l~~~--~ 52 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNF------GG------------------KEAAVEI-NLLLAI--G 52 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCc------CC------------------HHHHHHH-HHHHhc--C
Confidence 5789999986543222 34556789999999999952 22 0111111 334333 7
Q ss_pred CcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEecccc------CCCCHhHHHHHHHH
Q 014557 291 VPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS------FDKSGDQYKWLEED 364 (422)
Q Consensus 291 iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~------~~~~~~Q~~WL~~~ 364 (422)
+|+++++||||..... ......... ..+ ..+.++++.|+++++... .....+|++|+ +.
T Consensus 53 ~p~~~v~GNHD~~~~~-----~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~ 117 (188)
T cd07392 53 VPVLAVPGNCDTPEIL-----GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GR 117 (188)
T ss_pred CCEEEEcCCCCCHHHH-----HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hh
Confidence 8999999999974211 110000000 011 245678899999987421 12357899998 44
Q ss_pred HHhcccCCCCEEEEEeCCCcccC-CcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 365 LANVEREVTPWLVATWHAPWYST-YKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 365 L~~~~~~~~~w~Iv~~H~P~y~~-~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
|... ..+..|+++|+|++.. ............+.+.+++++++++++|+||+|.
T Consensus 118 l~~~---~~~~~ilv~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~ 172 (188)
T cd07392 118 LNNL---LAKNLILVTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHE 172 (188)
T ss_pred hhcc---CCCCeEEEECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccc
Confidence 4432 2234788889988763 1111111112347788999999999999999996
No 20
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.67 E-value=5.7e-16 Score=142.74 Aligned_cols=146 Identities=20% Similarity=0.254 Sum_probs=92.5
Q ss_pred CeEEEEEecCCCCCCh------------HHHHHH-HHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchh
Q 014557 208 PSRIAIVGDVGLTYNT------------TSTVSH-MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~------------~~~~~~-l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~ 274 (422)
.+||++++|+|..... .+.+.+ +.+.+||+||++||+++.... .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~-------------------~~--- 59 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENT-------------------ND--- 59 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCC-------------------ch---
Confidence 5899999999986542 122333 335789999999999963210 00
Q ss_pred hHHHHHHHhhhhhh-cCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCC
Q 014557 275 PRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDK 353 (422)
Q Consensus 275 ~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~ 353 (422)
..+..|.++++.+. .++|+++++||||. ....
T Consensus 60 ~~~~~~~~~~~~l~~~~~p~~~~~GNHD~-----------------------------------------------~g~l 92 (199)
T cd07383 60 NSTSALDKAVSPMIDRKIPWAATFGNHDG-----------------------------------------------YDWI 92 (199)
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECccCCC-----------------------------------------------CCCC
Confidence 02233444444442 37999999999991 1113
Q ss_pred CHhHHHHHHHHHHhcc--cCCCCEEEEEeCCCcccCCccc---------ccch---HHHHHHHHH-HHHHcCCcEEEEcc
Q 014557 354 SGDQYKWLEEDLANVE--REVTPWLVATWHAPWYSTYKAH---------YREA---ECMRVAMED-LLYKYGVDVVFNGH 418 (422)
Q Consensus 354 ~~~Q~~WL~~~L~~~~--~~~~~w~Iv~~H~P~y~~~~~~---------~~~~---~~~r~~l~~-ll~~~~VdlvlsGH 418 (422)
..+|++||+++|++.. +....+.++++|+|+....... ..+. ......+.+ +.+..+|+++|+||
T Consensus 93 ~~~ql~wL~~~l~~~~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH 172 (199)
T cd07383 93 RPSQIEWFKETSAALKKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGH 172 (199)
T ss_pred CHHHHHHHHHHHHHHhhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCC
Confidence 5799999999999863 2234568899999876532111 1110 011233444 44566999999999
Q ss_pred ccCC
Q 014557 419 VSES 422 (422)
Q Consensus 419 ~H~y 422 (422)
+|.+
T Consensus 173 ~H~~ 176 (199)
T cd07383 173 DHGN 176 (199)
T ss_pred CCCc
Confidence 9963
No 21
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.66 E-value=2.3e-15 Score=142.12 Aligned_cols=170 Identities=15% Similarity=0.212 Sum_probs=103.7
Q ss_pred EEEEecCCCCCC-----------hHHHHHHHHhC------CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccch
Q 014557 211 IAIVGDVGLTYN-----------TTSTVSHMISN------RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (422)
Q Consensus 211 f~v~gD~~~~~~-----------~~~~~~~l~~~------~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y 273 (422)
|.+++|+|+... ..+.++.+.+. +||+|+++||+++. +. +
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~------~~-----------------~ 57 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA------MK-----------------L 57 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC------CC-----------------h
Confidence 357899997721 13455555544 99999999999842 11 0
Q ss_pred hhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEecccc-C-
Q 014557 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS-F- 351 (422)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~-~- 351 (422)
.......++++.+ ..|+++|+||||+.... ...+.+.+. .. +..-....++.++++.|++++.... +
T Consensus 58 -~~~~~~l~~l~~l--~~~v~~V~GNHD~~~~~----~~~~~~~l~--~~--~~~~~~n~~~~~~~i~i~G~~~~~~~~~ 126 (232)
T cd07393 58 -EEAKLDLAWIDAL--PGTKVLLKGNHDYWWGS----ASKLRKALE--ES--RLALLFNNAYIDDDVAICGTRGWDNPGN 126 (232)
T ss_pred -HHHHHHHHHHHhC--CCCeEEEeCCccccCCC----HHHHHHHHH--hc--CeEEeccCcEEECCEEEEEEEeeCCCCC
Confidence 1222333344443 35789999999984211 111211111 00 0000012346678899999874211 0
Q ss_pred C---------------CCHhHHHHHHHHHHhcccCC-CCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEE
Q 014557 352 D---------------KSGDQYKWLEEDLANVEREV-TPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVF 415 (422)
Q Consensus 352 ~---------------~~~~Q~~WL~~~L~~~~~~~-~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vdlvl 415 (422)
. ...+|++||++.|++..... ..++|+++|+|++..... .+.+.+++++++++++|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~--------~~~~~~~~~~~~v~~vl 198 (232)
T cd07393 127 PWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD--------DSPISKLIEEYGVDICV 198 (232)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC--------HHHHHHHHHHcCCCEEE
Confidence 0 12569999999999875332 246899999998764321 23567889999999999
Q ss_pred EccccCC
Q 014557 416 NGHVSES 422 (422)
Q Consensus 416 sGH~H~y 422 (422)
+||+|.+
T Consensus 199 ~GH~H~~ 205 (232)
T cd07393 199 YGHLHGV 205 (232)
T ss_pred ECCCCCC
Confidence 9999963
No 22
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.65 E-value=1.8e-15 Score=152.73 Aligned_cols=90 Identities=22% Similarity=0.342 Sum_probs=68.7
Q ss_pred CcceEEEE-eCcEEEEEEeccccC-----CCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCccccc-----chHH
Q 014557 329 SKFYYSFN-AGGIHFLMLAAYVSF-----DKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR-----EAEC 397 (422)
Q Consensus 329 ~~~yysf~-~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~-----~~~~ 397 (422)
+..||+|+ .++++||+||+.... ....+|++||+++|++. +.+++||++|||++........ ....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999997431 23699999999999974 2346899999998764321110 1112
Q ss_pred HHHHHHHHHHHc-CCcEEEEccccC
Q 014557 398 MRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 398 ~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
..++|.++|++| +|.++|+||+|.
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~ 391 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHS 391 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCC
Confidence 246899999999 899999999996
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.64 E-value=5.1e-15 Score=143.47 Aligned_cols=178 Identities=25% Similarity=0.330 Sum_probs=117.2
Q ss_pred eEEEEEecCCCC--CC-hH----HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHH
Q 014557 209 SRIAIVGDVGLT--YN-TT----STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG 281 (422)
Q Consensus 209 ~rf~v~gD~~~~--~~-~~----~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~ 281 (422)
+||++++|.|.. .. .. ++++++...+||++|++||+++. |. ........
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~------~~------------------~~~~~~~~ 56 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND------GE------------------PEEYRRLK 56 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC------CC------------------HHHHHHHH
Confidence 489999999988 22 22 34566666789999999999952 32 23344556
Q ss_pred HhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEe-CcEEEEEEecccc----CCCCHh
Q 014557 282 RYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNA-GGIHFLMLAAYVS----FDKSGD 356 (422)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Ldt~~~----~~~~~~ 356 (422)
++++.+....|++++|||||...... ..+...+.... ..+..... ++++++++|+... ...+..
T Consensus 57 ~~l~~~~~~~~~~~vpGNHD~~~~~~----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~ 125 (301)
T COG1409 57 ELLARLELPAPVIVVPGNHDARVVNG----EAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAE 125 (301)
T ss_pred HHHhhccCCCceEeeCCCCcCCchHH----HHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHH
Confidence 66775556889999999999864322 22222221110 11111222 6789999998753 234799
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcC--CcEEEEccccC
Q 014557 357 QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYG--VDVVFNGHVSE 421 (422)
Q Consensus 357 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~ 421 (422)
|++||++.|++........+|+++|+|..................+..++..++ |+++|+||.|.
T Consensus 126 q~~~l~~~l~~~~~~~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~ 192 (301)
T COG1409 126 QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHL 192 (301)
T ss_pred HHHHHHHHHHhCccccCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCcccc
Confidence 999999999987543112468888888766433322222233466778888888 99999999995
No 24
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.54 E-value=1.8e-14 Score=128.81 Aligned_cols=142 Identities=19% Similarity=0.296 Sum_probs=85.8
Q ss_pred EEEEecCCCCCChHHHH--HHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhh
Q 014557 211 IAIVGDVGLTYNTTSTV--SHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (422)
Q Consensus 211 f~v~gD~~~~~~~~~~~--~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (422)
|+++||+|......... +.+.+.++|+++++||+++. +. ...+.. ......
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~------~~------------------~~~~~~---~~~~~~ 53 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYL------TD------------------APRFAP---LLLALK 53 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCC------cc------------------hHHHHH---HHHhhc
Confidence 57899999875433222 23345789999999999952 11 011211 223334
Q ss_pred cCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCC-CHhHHHHHHHHHHh
Q 014557 289 SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDK-SGDQYKWLEEDLAN 367 (422)
Q Consensus 289 ~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~-~~~Q~~WL~~~L~~ 367 (422)
...|+++++||||.. +.|++...+.++.. +.++.+|+.++++
T Consensus 54 ~~~~v~~v~GNHD~~------------------------------------~~~~G~~~w~~~~~~~~~~~~~~~~d~~- 96 (166)
T cd07404 54 GFEPVIYVPGNHEFY------------------------------------VRIIGTTLWSDISLFGEAAARMRMNDFR- 96 (166)
T ss_pred CCccEEEeCCCcceE------------------------------------EEEEeeecccccCccchHHHHhCCCCCC-
Confidence 578999999999974 22222222222221 2345555555544
Q ss_pred cccCCCCEEEEEeCCCcccCCccc---cc-chHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 368 VEREVTPWLVATWHAPWYSTYKAH---YR-EAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 368 ~~~~~~~w~Iv~~H~P~y~~~~~~---~~-~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
+.+||++|+|+....... .. .....++.+.+++++++|+++++||+|..
T Consensus 97 ------~~~vv~~HhpP~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~ 149 (166)
T cd07404 97 ------GKTVVVTHHAPSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFN 149 (166)
T ss_pred ------CCEEEEeCCCCCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCcccc
Confidence 136888888887643221 11 11234566778888999999999999963
No 25
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.54 E-value=2.9e-13 Score=126.41 Aligned_cols=176 Identities=14% Similarity=0.123 Sum_probs=101.7
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhh
Q 014557 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (422)
+.||+++||+|..... .+.++.+.+.++|+|+++||+++. +. . ......+.+.+..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~------g~-------------~----~~~~~~~l~~l~~ 60 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPK------AA-------------K----SEDYAAFFRILGE 60 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCC------CC-------------C----HHHHHHHHHHHHh
Confidence 5799999999965332 223344445789999999999952 21 0 1122233333333
Q ss_pred hhcCCcEEEecCCcccccccccccch-hcccccCCCCCCCCCCCcceEEEEe-CcEEEEEEeccccC--CCCHhHH----
Q 014557 287 VLSKVPIMVVEGNHEYEEQAENRTFV-AYTSRFAFPSKESGSLSKFYYSFNA-GGIHFLMLAAYVSF--DKSGDQY---- 358 (422)
Q Consensus 287 l~~~iP~~~v~GNHD~~~~~~~~~~~-~y~~~f~~P~~~~~~~~~~yysf~~-g~v~fi~Ldt~~~~--~~~~~Q~---- 358 (422)
+ ..|+++++||||.... ..+. .|......|... ...+. ...+ |++.|++|+....+ ..+++|.
T Consensus 61 l--~~pv~~V~GNhD~~v~---~~l~~~~~~~~~~p~~~--~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 61 A--HLPTFYVPGPQDAPLW---EYLREAYNAELVHPEIR--NVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred c--CCceEEEcCCCChHHH---HHHHHHhcccccCccce--ecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 3 5899999999996310 0111 111111112110 01111 2344 55999999976433 2345552
Q ss_pred HHHHH-HHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEcccc
Q 014557 359 KWLEE-DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVS 420 (422)
Q Consensus 359 ~WL~~-~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 420 (422)
.||.+ .|+...+...+..|+++|+|++.....+ ...+++.+++++++..+++|||+|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 56533 2222221123357889999998873222 223677789999999999999998
No 26
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.54 E-value=6e-14 Score=122.21 Aligned_cols=113 Identities=22% Similarity=0.368 Sum_probs=81.2
Q ss_pred EEEEecCCCCCChH-----------HHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHH
Q 014557 211 IAIVGDVGLTYNTT-----------STVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDY 279 (422)
Q Consensus 211 f~v~gD~~~~~~~~-----------~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~ 279 (422)
|++++|+|.+.... ..++.+.+.+||+|+++||+++. +. +.+|+.
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~------~~------------------~~~~~~ 56 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQR------GL------------------PEEFEE 56 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCC------CC------------------HHHHHH
Confidence 57899999875421 12444556799999999999963 22 245667
Q ss_pred HHHhhhhhhcC-CcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHH
Q 014557 280 WGRYMQPVLSK-VPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQY 358 (422)
Q Consensus 280 ~~~~l~~l~~~-iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~ 358 (422)
+.++++.+... +|++.++||||.
T Consensus 57 ~~~~~~~l~~~~~~~~~v~GNHD~-------------------------------------------------------- 80 (144)
T cd07400 57 AREFLDALPAPLEPVLVVPGNHDV-------------------------------------------------------- 80 (144)
T ss_pred HHHHHHHccccCCcEEEeCCCCeE--------------------------------------------------------
Confidence 77777777443 699999999996
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
|+++|+|++......... ...++.+.+++++++++++++||+|..
T Consensus 81 ------------------iv~~Hhp~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~l~GH~H~~ 125 (144)
T cd07400 81 ------------------IVVLHHPLVPPPGSGRER-LLDAGDALKLLAEAGVDLVLHGHKHVP 125 (144)
T ss_pred ------------------EEEecCCCCCCCcccccc-CCCHHHHHHHHHHcCCCEEEECCCCCc
Confidence 777788876643221111 114567899999999999999999973
No 27
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.52 E-value=4.3e-13 Score=134.40 Aligned_cols=92 Identities=17% Similarity=0.248 Sum_probs=66.6
Q ss_pred CcceEEEE-eCcE--EEEEEecccc-----------CCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCccc---
Q 014557 329 SKFYYSFN-AGGI--HFLMLAAYVS-----------FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAH--- 391 (422)
Q Consensus 329 ~~~yysf~-~g~v--~fi~Ldt~~~-----------~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~--- 391 (422)
+..||+|+ .|++ |||+||+... ...+.+|++||+++|+.... +.+++|+++|+|+.+.....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 34599999 5855 9999998641 11369999999999999753 45789999999987522111
Q ss_pred cc----------chHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 392 YR----------EAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 392 ~~----------~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
+. +......+|.++|.+| +|.++||||.|.
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 00 0001124799999999 799999999995
No 28
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.50 E-value=1.3e-13 Score=128.59 Aligned_cols=181 Identities=15% Similarity=0.166 Sum_probs=102.5
Q ss_pred EEEEEecCCCCCCh----------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccch
Q 014557 210 RIAIVGDVGLTYNT----------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (422)
Q Consensus 210 rf~v~gD~~~~~~~----------------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y 273 (422)
||++++|+|++... ..+++.+.+.+||+|+++||+++... ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~----~~------------------ 58 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNN----PS------------------ 58 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCC----CC------------------
Confidence 68999999987431 23344555679999999999985310 00
Q ss_pred hhHHHHHHHhhhhhh-cCCcEEEecCCcccccccccccchhcccccCCCCC--CCCCCCcceEEEEeCcEEEEEEecccc
Q 014557 274 QPRWDYWGRYMQPVL-SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSK--ESGSLSKFYYSFNAGGIHFLMLAAYVS 350 (422)
Q Consensus 274 ~~~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~--~~~~~~~~yysf~~g~v~fi~Ldt~~~ 350 (422)
...+..+.+.++.+. ..+|+++++||||....... .........+... ...........++.+++.|++++....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~ 136 (223)
T cd00840 59 PEALELLIEALRRLKEAGIPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRR 136 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEecCCCCCcccccc--ccchHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCH
Confidence 123455666666664 58999999999998643221 1111100000000 000011122334455688888875422
Q ss_pred CCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 351 FDKSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 351 ~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
. ....+.++++..+.+.. .....|++.|.|+.......... .....+.+...++|++++||.|.
T Consensus 137 ~-~~~~~~~~~~~~~~~~~--~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~ 200 (223)
T cd00840 137 S-RLRDLLADAELRPRPLD--PDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHR 200 (223)
T ss_pred H-HHHHHHHHHHHHhhccC--CCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCccc
Confidence 1 12334445455555443 34458999999986543221110 12233456678999999999996
No 29
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.47 E-value=5.4e-13 Score=124.63 Aligned_cols=160 Identities=19% Similarity=0.244 Sum_probs=96.6
Q ss_pred CeEEEEEecCCCCCCh-----HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHH
Q 014557 208 PSRIAIVGDVGLTYNT-----TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~-----~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~ 282 (422)
++||++++|+|..... .+.++.+.+.+||+|+++||+++.. . ... +.+.+
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~------~------------------~~~-~~~~~ 55 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGS------V------------------DVL-ELLLE 55 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCc------c------------------hhh-HHHHH
Confidence 4799999999987432 3456666678999999999999531 1 001 24456
Q ss_pred hhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHHH
Q 014557 283 YMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLE 362 (422)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~ 362 (422)
.++.+....|+++++||||....... .+........+. -..+.+..++.++..+..+.-.. .....+++.
T Consensus 56 ~l~~l~~~~~v~~v~GNHD~~~~~~~-~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~ 125 (223)
T cd07385 56 LLKKLKAPLGVYAVLGNHDYYSGDEE-NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLE 125 (223)
T ss_pred HHhccCCCCCEEEECCCcccccCchH-HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHH
Confidence 66666667999999999998643221 101111111111 11233445666664444332111 122234566
Q ss_pred HHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 363 EDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 363 ~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
+.+++.+. ..+.|++.|.|.+.. .+.+.++|++++||+|.
T Consensus 126 ~~~~~~~~--~~~~I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHg 165 (223)
T cd07385 126 KALKGLDE--DDPNILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHG 165 (223)
T ss_pred HHHhCCCC--CCCEEEEecCCChhH-----------------HhcccCccEEEeccCCC
Confidence 67766443 345899999985321 12567999999999996
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.41 E-value=3.8e-12 Score=122.94 Aligned_cols=157 Identities=15% Similarity=0.161 Sum_probs=91.7
Q ss_pred CeEEEEEecCCCCCC-----hHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHH
Q 014557 208 PSRIAIVGDVGLTYN-----TTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~-----~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~ 282 (422)
++||+++||+|.... ..+.++.+.+.+||+|+++||+++.+ . ...++.+.+
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~------~------------------~~~~~~~~~ 104 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFD------M------------------PLNFSAFSD 104 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCC------c------------------cccHHHHHH
Confidence 699999999998632 13345566678999999999998421 1 012345666
Q ss_pred hhhhhhcCCcEEEecCCccccccccc-ccchhcccccCCCCCCCCCCCcceEEEEeCc--EEEEEEeccccCCCCHhHHH
Q 014557 283 YMQPVLSKVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPSKESGSLSKFYYSFNAGG--IHFLMLAAYVSFDKSGDQYK 359 (422)
Q Consensus 283 ~l~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~--v~fi~Ldt~~~~~~~~~Q~~ 359 (422)
.++.+.+..|+++|+||||+...... ..+....+.-.+ .-..+....+..++ +.++++|........
T Consensus 105 ~L~~L~~~~pv~~V~GNHD~~~~~~~~~~~~~~l~~~gi-----~lL~n~~~~i~~~~~~i~i~G~~d~~~~~~~----- 174 (271)
T PRK11340 105 VLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSAGI-----TVLFNQATVIATPNRQFELVGTGDLWAGQCK----- 174 (271)
T ss_pred HHHHHhhcCCEEEecCCCCcccCccchHHHHHHHHhcCc-----EEeeCCeEEEeeCCcEEEEEEecchhccCCC-----
Confidence 77777667899999999998532110 111111111110 01123344455543 666777642111100
Q ss_pred HHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 360 WLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 360 WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
..+.+++ . ...|++.|.|-.- +.+.+.++|++||||+|.
T Consensus 175 -~~~~~~~----~-~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHG 213 (271)
T PRK11340 175 -PPPASEA----N-LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHG 213 (271)
T ss_pred -hhHhcCC----C-CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccC
Confidence 1112221 2 2478899999532 123457899999999995
No 31
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.35 E-value=1.1e-11 Score=116.42 Aligned_cols=142 Identities=18% Similarity=0.178 Sum_probs=91.5
Q ss_pred EEEEEecCCCCCChHHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCC--cccccCCCCCCccchhhHHHHHH--
Q 014557 210 RIAIVGDVGLTYNTTSTVSHMI----SNRPDLILLVGDVTYANLYLTNGTGSD--CYACSFANSPIHETYQPRWDYWG-- 281 (422)
Q Consensus 210 rf~v~gD~~~~~~~~~~~~~l~----~~~pDfvl~~GDl~yad~~~~~g~~~~--~y~~~~~~~~~~e~y~~~wd~~~-- 281 (422)
||++.||.+...........+. +.+|||+|++||.+|++.......... --..........+.|+.++..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5888999887766555566664 789999999999999874211100000 00000011234556676776664
Q ss_pred HhhhhhhcCCcEEEecCCccccccccc----------------ccchhcccccCCCCCCCC--CCCcceEEEEeCcE-EE
Q 014557 282 RYMQPVLSKVPIMVVEGNHEYEEQAEN----------------RTFVAYTSRFAFPSKESG--SLSKFYYSFNAGGI-HF 342 (422)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHD~~~~~~~----------------~~~~~y~~~f~~P~~~~~--~~~~~yysf~~g~v-~f 342 (422)
..++.+.+.+|++.++++||+..+.+. ...++|.+....+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 447778889999999999999876443 122344444444333222 34678999999996 99
Q ss_pred EEEeccccC
Q 014557 343 LMLAAYVSF 351 (422)
Q Consensus 343 i~Ldt~~~~ 351 (422)
++||++...
T Consensus 161 ~~lD~R~~R 169 (228)
T cd07389 161 ILLDTRTYR 169 (228)
T ss_pred EEEeccccc
Confidence 999998643
No 32
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.34 E-value=2.5e-11 Score=116.34 Aligned_cols=189 Identities=22% Similarity=0.334 Sum_probs=104.8
Q ss_pred CeEEEEEecCCCCCC--------------------hHHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCC
Q 014557 208 PSRIAIVGDVGLTYN--------------------TTSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFAN 266 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~--------------------~~~~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~ 266 (422)
+|||+.++|+|.+.. +...++++. .++||||+++||+++...
T Consensus 53 ~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~----------------- 115 (379)
T KOG1432|consen 53 TFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHS----------------- 115 (379)
T ss_pred ceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccc-----------------
Confidence 799999999998743 123355554 589999999999996421
Q ss_pred CCCccchhhHHHHHHHhhhhh-hcCCcEEEecCCcccccccccccchhcccccCCCCCCC---CCCCcceEEEEeCc---
Q 014557 267 SPIHETYQPRWDYWGRYMQPV-LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES---GSLSKFYYSFNAGG--- 339 (422)
Q Consensus 267 ~~~~e~y~~~wd~~~~~l~~l-~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~---~~~~~~yysf~~g~--- 339 (422)
..+++. .+.+.++|. ..+|||.+++||||-+..........+... +|..-+ ...+..+--..+|+
T Consensus 116 ---t~Da~~---sl~kAvaP~I~~~IPwA~~lGNHDdes~ltr~ql~~~i~~--lP~s~~~v~p~dg~~~~~~g~gnyn~ 187 (379)
T KOG1432|consen 116 ---TQDAAT---SLMKAVAPAIDRKIPWAAVLGNHDDESDLTRLQLMKFISK--LPYSLSQVNPPDGHMYIIDGFGNYNL 187 (379)
T ss_pred ---cHhHHH---HHHHHhhhHhhcCCCeEEEecccccccccCHHHHHHHHhc--CCCccccCCCcccceeeeecccceEE
Confidence 112232 344555664 679999999999998754332222222211 221100 00011110111111
Q ss_pred ---------------EEEEEEecccc---------C-CCCHhHHHHHHHHHHhc---ccCCCC-EEEEEeCCCccc--CC
Q 014557 340 ---------------IHFLMLAAYVS---------F-DKSGDQYKWLEEDLANV---EREVTP-WLVATWHAPWYS--TY 388 (422)
Q Consensus 340 ---------------v~fi~Ldt~~~---------~-~~~~~Q~~WL~~~L~~~---~~~~~~-w~Iv~~H~P~y~--~~ 388 (422)
..++.||+..+ | .....|.+||+..-++- +..-.| --++++|.|+-. ..
T Consensus 188 ~i~~~~ds~~~~~sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~ 267 (379)
T KOG1432|consen 188 QIEGAIDSELENKSVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLEL 267 (379)
T ss_pred EeccCCCcccccCceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhc
Confidence 23455555321 1 12578999998877431 112223 357778998732 11
Q ss_pred cc------cccch---HHHHHHHHHHHH-HcCCcEEEEccccC
Q 014557 389 KA------HYREA---ECMRVAMEDLLY-KYGVDVVFNGHVSE 421 (422)
Q Consensus 389 ~~------~~~~~---~~~r~~l~~ll~-~~~VdlvlsGH~H~ 421 (422)
.. .+++. ......+...|. ..+|++||+||+|.
T Consensus 268 ~~~tp~~g~~~E~~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHv 310 (379)
T KOG1432|consen 268 ESKTPLIGVFQEGVSASKHNSGFLTTLVNRGNVKGVFCGHDHV 310 (379)
T ss_pred cCCCcccceeeccccccccccHHHHHHHhccCcceEEeccccc
Confidence 11 11111 112345667777 67999999999996
No 33
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.29 E-value=2.7e-11 Score=101.73 Aligned_cols=112 Identities=28% Similarity=0.456 Sum_probs=78.1
Q ss_pred EEEecCCCCCChHHHH---HHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhh
Q 014557 212 AIVGDVGLTYNTTSTV---SHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (422)
Q Consensus 212 ~v~gD~~~~~~~~~~~---~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (422)
+++||+|.+....... ....+.++|+|+++||+++. +.. ..+..+........
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~------~~~------------------~~~~~~~~~~~~~~ 56 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGD------GPD------------------PEEVLAAALALLLL 56 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCC------CCC------------------chHHHHHHHHHhhc
Confidence 4689999886544333 34446799999999999963 210 11222222333346
Q ss_pred cCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHHHHHHHhc
Q 014557 289 SKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANV 368 (422)
Q Consensus 289 ~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 368 (422)
...|++.++||||
T Consensus 57 ~~~~~~~~~GNHD------------------------------------------------------------------- 69 (131)
T cd00838 57 LGIPVYVVPGNHD------------------------------------------------------------------- 69 (131)
T ss_pred CCCCEEEeCCCce-------------------------------------------------------------------
Confidence 6899999999999
Q ss_pred ccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 369 EREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 369 ~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
|+++|.|+..............++.+..++.+.+++++|+||.|.+
T Consensus 70 --------i~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~ 115 (131)
T cd00838 70 --------ILLTHGPPYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVY 115 (131)
T ss_pred --------EEEeccCCCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecc
Confidence 8888999877543322222225788889999999999999999975
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.25 E-value=4e-11 Score=103.43 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=73.9
Q ss_pred EEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhc
Q 014557 210 RIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLS 289 (422)
Q Consensus 210 rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 289 (422)
||+++||+|.... .+...++|+++++||++.. +. ..+++.+.++++.+..
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~------~~------------------~~~~~~~~~~l~~~~~ 50 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTER------GT------------------LEELQKFLDWLKSLPH 50 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCC------CC------------------HHHHHHHHHHHHhCCC
Confidence 5899999997644 2334689999999999842 21 1223344555555421
Q ss_pred CCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHHHHHHHhcc
Q 014557 290 KVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEEDLANVE 369 (422)
Q Consensus 290 ~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~ 369 (422)
.++++++||||.... .
T Consensus 51 -~~~~~v~GNHD~~~~--------------------------------------------------------------~- 66 (135)
T cd07379 51 -PHKIVIAGNHDLTLD--------------------------------------------------------------P- 66 (135)
T ss_pred -CeEEEEECCCCCcCC--------------------------------------------------------------C-
Confidence 235789999996310 1
Q ss_pred cCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 370 REVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 370 ~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
.+ +.|++.|.|++..............+.+.+++++++++++++||+|..
T Consensus 67 -~~--~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~ 116 (135)
T cd07379 67 -ED--TDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEG 116 (135)
T ss_pred -CC--CEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCc
Confidence 11 367788999876532221111122356677888999999999999963
No 35
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.16 E-value=8.6e-10 Score=103.54 Aligned_cols=65 Identities=32% Similarity=0.454 Sum_probs=45.8
Q ss_pred eEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhh
Q 014557 209 SRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVL 288 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~ 288 (422)
+||+++||+|..... ...+.+.+.+||+|+++||++.. . ..+.+.+..+
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~-------~----------------------~~~~~~l~~l- 49 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE-------S----------------------VQLVRAISSL- 49 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC-------h----------------------HHHHHHHHhC-
Confidence 589999999976443 23456667799999999999831 0 1223334333
Q ss_pred cCCcEEEecCCcccccc
Q 014557 289 SKVPIMVVEGNHEYEEQ 305 (422)
Q Consensus 289 ~~iP~~~v~GNHD~~~~ 305 (422)
..|++++.||||....
T Consensus 50 -~~p~~~V~GNHD~~~~ 65 (238)
T cd07397 50 -PLPKAVILGNHDAWYD 65 (238)
T ss_pred -CCCeEEEcCCCccccc
Confidence 5799999999998643
No 36
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.11 E-value=4e-10 Score=107.00 Aligned_cols=175 Identities=17% Similarity=0.218 Sum_probs=92.1
Q ss_pred eEEEEEecCCCCCChHH----HHHHHH--hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHH
Q 014557 209 SRIAIVGDVGLTYNTTS----TVSHMI--SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGR 282 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~~~----~~~~l~--~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~ 282 (422)
+|++++||+|++..... .++.+. +.+||+|+++||+++. + .|.. . ..+......+
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~--~--~g~~-----------~----~~~~~~~~~~ 61 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEA--W--IGDD-----------D----PSPFAREIAA 61 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceecc--c--cccC-----------c----CCHHHHHHHH
Confidence 48999999998754322 233332 3589999999999952 1 1110 0 0012234445
Q ss_pred hhhhhhc-CCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHH
Q 014557 283 YMQPVLS-KVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWL 361 (422)
Q Consensus 283 ~l~~l~~-~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL 361 (422)
.++.+.. .+|+++++||||.... . .+.+...+.. -.....++.++.+++...+... ......++++
T Consensus 62 ~l~~l~~~g~~v~~v~GNHD~~~~---~---~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~ 128 (241)
T PRK05340 62 ALKALSDSGVPCYFMHGNRDFLLG---K---RFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDTL-CTDDKAYQRF 128 (241)
T ss_pred HHHHHHHcCCeEEEEeCCCchhhh---H---HHHHhCCCEE------eCCcEEEEECCEEEEEECCccc-ccCCHHHHHH
Confidence 5666643 4899999999997421 1 1211111100 0112346777877777655322 1123444444
Q ss_pred HHHHHhcccCCCCEEEEEeCCCcccCCcc----------------cccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 362 EEDLANVEREVTPWLVATWHAPWYSTYKA----------------HYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 362 ~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~----------------~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
++.+.+. |....+|.+++..... ...-.....+.+.+++++++++++++||+|.
T Consensus 129 r~~~r~~------~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~ 198 (241)
T PRK05340 129 RRKVRNP------WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHR 198 (241)
T ss_pred HHHHhCH------HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccC
Confidence 4444431 1222223222211000 0000000125677899999999999999996
No 37
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.10 E-value=5.7e-10 Score=108.00 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=57.6
Q ss_pred CeEEEEEecCCCCCCh---HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh
Q 014557 208 PSRIAIVGDVGLTYNT---TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~---~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l 284 (422)
++||+.++|+|..... .+.+.++....||+|+++||+++.+ . .+.+..+.+.+
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~------~------------------~~~~~~~~~~L 99 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGD------R------------------PPGVAALALFL 99 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCC------C------------------CCCHHHHHHHH
Confidence 6899999999987554 3345555567889999999999520 0 12446677888
Q ss_pred hhhhcCCcEEEecCCccccccc
Q 014557 285 QPVLSKVPIMVVEGNHEYEEQA 306 (422)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~~~~ 306 (422)
+++.+..+++++.||||+....
T Consensus 100 ~~L~~~~gv~av~GNHd~~~~~ 121 (284)
T COG1408 100 AKLKAPLGVFAVLGNHDYGVDR 121 (284)
T ss_pred HhhhccCCEEEEeccccccccc
Confidence 8999999999999999997543
No 38
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.06 E-value=7e-10 Score=97.28 Aligned_cols=58 Identities=24% Similarity=0.551 Sum_probs=36.8
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (422)
+||+++||+|..... .+.++.+ ++||+|+++||++.. .++.+.++.+
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------------------------~~~~~~~~~~ 48 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------------------------EEVLELLRDI 48 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------------------------HHHHHHHHHH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------------------------HHHHHHHhcC
Confidence 699999999986432 3445555 579999999999831 2333334333
Q ss_pred hcCCcEEEecCCccc
Q 014557 288 LSKVPIMVVEGNHEY 302 (422)
Q Consensus 288 ~~~iP~~~v~GNHD~ 302 (422)
|++++.||||.
T Consensus 49 ----~~~~v~GNHD~ 59 (156)
T PF12850_consen 49 ----PVYVVRGNHDN 59 (156)
T ss_dssp ----EEEEE--CCHS
T ss_pred ----CEEEEeCCccc
Confidence 89999999995
No 39
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.05 E-value=9.8e-10 Score=100.01 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=29.0
Q ss_pred EEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 377 VATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 377 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
|+++|.|+..... ..+..++.+++++++|+||.|.+
T Consensus 112 i~lsH~P~~~~~~----------~~~~~~~~~~~p~~Ifs~H~H~s 147 (195)
T cd08166 112 IMLSHVPLLAEGG----------QALKHVVTDLDPDLIFSAHRHKS 147 (195)
T ss_pred eeeeccccccccc----------HHHHHHHHhcCceEEEEcCccce
Confidence 8899999865321 25667888999999999999975
No 40
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.03 E-value=5.5e-09 Score=95.50 Aligned_cols=192 Identities=21% Similarity=0.314 Sum_probs=87.2
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCccc-----ccCCCC-CCcc--chh-hHH
Q 014557 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYA-----CSFANS-PIHE--TYQ-PRW 277 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~-----~~~~~~-~~~e--~y~-~~w 277 (422)
+-|+++++|.+..... .+.++.+.+.+||.++++||+.-+. ...+.|. ...|+. .+.+ .|+ +..
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~------a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~ 78 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAE------ARSDEYERAQEEQREPDKSEINEEECYDSEAL 78 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TC------HHHHHHHHHHHTT----THHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccc------hhhhHHHHHhhhccCcchhhhhhhhhhhHHHH
Confidence 4589999999865332 2344455567999999999998321 1111110 000000 0000 000 012
Q ss_pred HHHHHhhhhhhcCCcEEEecCCcccccccccccc-hhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEecccc-CCC--
Q 014557 278 DYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTF-VAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVS-FDK-- 353 (422)
Q Consensus 278 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~-~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~-~~~-- 353 (422)
+.+++.+..+ .+|++++|||||..... .+ .+|......|.-. .. ..-+.+.-|.+-|+++....- ...
T Consensus 79 ~~ff~~L~~~--~~p~~~vPG~~Dap~~~---~lr~a~~~e~v~p~~~--~v-H~sf~~~~g~y~v~G~GGeI~~~~~~~ 150 (255)
T PF14582_consen 79 DKFFRILGEL--GVPVFVVPGNMDAPERF---FLREAYNAEIVTPHIH--NV-HESFFFWKGEYLVAGMGGEITDDQREE 150 (255)
T ss_dssp HHHHHHHHCC---SEEEEE--TTS-SHHH---HHHHHHHCCCC-TTEE--E--CTCEEEETTTEEEEEE-SEEESSS-BC
T ss_pred HHHHHHHHhc--CCcEEEecCCCCchHHH---HHHHHhccceecccee--ee-eeeecccCCcEEEEecCccccCCCccc
Confidence 3455555554 89999999999975210 01 1122111111100 00 011223334588888887532 111
Q ss_pred ------CHhHHHHHHHHHHhcccCCCCEEEEEeCCCc-ccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 354 ------SGDQYKWLEEDLANVEREVTPWLVATWHAPW-YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 354 ------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.....+|..+.|..++ ..-+|+++|.|+ +.....+-. .+++.+++++|+.++|++||+|-
T Consensus 151 ~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~G-----S~~V~dlIk~~~P~ivl~Ghihe 217 (255)
T PF14582_consen 151 EFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHVG-----SAAVRDLIKTYNPDIVLCGHIHE 217 (255)
T ss_dssp SSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTTS-----BHHHHHHHHHH--SEEEE-SSS-
T ss_pred cccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCccccc-----HHHHHHHHHhcCCcEEEeccccc
Confidence 1223455555666643 233788899998 433322222 26778999999999999999994
No 41
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.98 E-value=2.6e-09 Score=91.59 Aligned_cols=45 Identities=18% Similarity=0.087 Sum_probs=29.9
Q ss_pred EEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 376 LVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 376 ~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.|+++|+|++....... ......+.+.+++.+++++++|+||+|.
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~ 102 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHL 102 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCC
Confidence 47777887764322110 0111246777888999999999999996
No 42
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.96 E-value=1.8e-08 Score=92.30 Aligned_cols=175 Identities=20% Similarity=0.258 Sum_probs=104.4
Q ss_pred CeEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhh
Q 014557 208 PSRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (422)
.+|+++++|+|..... .+.++.+...++|+++.+||++|.+ .|.. ...-+.. + ++.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~----~~~~-------------~~~~~~~---~---~e~ 59 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFH----FGPK-------------EVAEELN---K---LEA 59 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhh----cCch-------------HHHHhhh---H---HHH
Confidence 5899999999987543 3444555567999999999999542 2221 0000100 1 344
Q ss_pred h-hcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccc------cCCCCHhH-H
Q 014557 287 V-LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYV------SFDKSGDQ-Y 358 (422)
Q Consensus 287 l-~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~------~~~~~~~Q-~ 358 (422)
+ ...+|+++++||-|-..- .... ......- .+ -..+.+++.|+++.... .+..++++ +
T Consensus 60 l~~~~~~v~avpGNcD~~~v-----~~~l-~~~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 60 LKELGIPVLAVPGNCDPPEV-----IDVL-KNAGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred HHhcCCeEEEEcCCCChHHH-----HHHH-Hhccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 4 358999999999885421 1111 1111100 01 45788888888865321 11122333 3
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccc-hHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYRE-AECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~-~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
.-|++-+++.+... .|+.+|.|+|........+ .......+.+++++.++.+.+|||+|-+
T Consensus 126 s~l~~~v~~~~~~~---~Il~~HaPP~gt~~d~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs 187 (226)
T COG2129 126 SKLKSLVKKADNPV---NILLTHAPPYGTLLDTPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHES 187 (226)
T ss_pred HHHHHHHhcccCcc---eEEEecCCCCCccccCCCCccccchHHHHHHHHHhCCceEEEeeeccc
Confidence 44444445443211 3899999999875442222 2233577889999999999999999953
No 43
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.96 E-value=1.3e-08 Score=104.60 Aligned_cols=175 Identities=18% Similarity=0.282 Sum_probs=103.5
Q ss_pred HHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCccc
Q 014557 225 STVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEY 302 (422)
Q Consensus 225 ~~~~~l~~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~ 302 (422)
.++++|.++ ++|||+++||++--+.|. ...+.--.......+.|.+....+|++++.||||.
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~----------------~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~ 262 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWA----------------QTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEI 262 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchh----------------hhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCC
Confidence 356667653 489999999998433220 01111111223334556777889999999999998
Q ss_pred ccccc-------cc-----cchhccccc--CCCCCC-CCCCCcceEE-EEeCcEEEEEEeccccC----------CCCHh
Q 014557 303 EEQAE-------NR-----TFVAYTSRF--AFPSKE-SGSLSKFYYS-FNAGGIHFLMLAAYVSF----------DKSGD 356 (422)
Q Consensus 303 ~~~~~-------~~-----~~~~y~~~f--~~P~~~-~~~~~~~yys-f~~g~v~fi~Ldt~~~~----------~~~~~ 356 (422)
..... .. -+.++...| .+|... .....+.+|. ...+|.++|+||+..-+ ....+
T Consensus 263 ~P~N~F~~~~~~~~~~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~ 342 (577)
T KOG3770|consen 263 HPVNLFAPGSVPKRHSQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPID 342 (577)
T ss_pred CcHhhcCCCCCcchhhhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchH
Confidence 74321 11 112222222 234332 1223345554 44689999999986322 23578
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc--CCcEEEEccccC
Q 014557 357 QYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY--GVDVVFNGHVSE 421 (422)
Q Consensus 357 Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~--~VdlvlsGH~H~ 421 (422)
|++|+..+|.+++.++.. |=++.|.|+-... . .+.....+-.++.++ -+...|.||.|.
T Consensus 343 ~lqWf~~~L~~ae~~Gek-Vhil~HIPpG~~~---c--~~~ws~~f~~iv~r~~~tI~gqf~GH~h~ 403 (577)
T KOG3770|consen 343 QLQWFVDQLQEAESAGEK-VHILGHIPPGDGV---C--LEGWSINFYRIVNRFRSTIAGQFYGHTHI 403 (577)
T ss_pred HhhHHHHHHHHHHhcCCE-EEEEEeeCCCCcc---h--hhhhhHHHHHHHHHHHHhhhhhccccCcc
Confidence 899999999998654443 6677899985421 1 112234455666666 255679999994
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.90 E-value=4.4e-09 Score=93.19 Aligned_cols=52 Identities=25% Similarity=0.508 Sum_probs=33.4
Q ss_pred HhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh-h--cCCcEEEecCCcccc
Q 014557 231 ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV-L--SKVPIMVVEGNHEYE 303 (422)
Q Consensus 231 ~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l-~--~~iP~~~v~GNHD~~ 303 (422)
.+.+||+|+++||++.. +.. .. ...|..+...+..+ . ..+|+++++||||..
T Consensus 35 ~~~~pd~vv~~GDl~~~------~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 35 WLLQPDVVFVLGDLFDE------GKW--------------ST-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HhcCCCEEEECCCCCCC------Ccc--------------CC-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 35799999999999953 110 00 13454444333333 2 258999999999974
No 45
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.89 E-value=3.2e-08 Score=87.01 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=77.0
Q ss_pred CCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhc
Q 014557 235 PDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAY 314 (422)
Q Consensus 235 pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y 314 (422)
=|.|++.||++.+-.. .++. .=++++..| .---+.+.||||+......+-..++
T Consensus 44 eDiVllpGDiSWaM~l-~ea~-----------------------~Dl~~i~~L--PG~K~m~rGNHDYWw~s~skl~n~l 97 (230)
T COG1768 44 EDIVLLPGDISWAMRL-EEAE-----------------------EDLRFIGDL--PGTKYMIRGNHDYWWSSISKLNNAL 97 (230)
T ss_pred hhEEEecccchhheec-hhhh-----------------------hhhhhhhcC--CCcEEEEecCCccccchHHHHHhhc
Confidence 4899999999976321 1111 113444444 2235678999999754221111111
Q ss_pred ccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccc----cCCCCHhH--------HHHHHHHHHhcccCCCCEEEEEeCC
Q 014557 315 TSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYV----SFDKSGDQ--------YKWLEEDLANVEREVTPWLVATWHA 382 (422)
Q Consensus 315 ~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~----~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~Iv~~H~ 382 (422)
...... ..-.|.++++.+++.-.+. ++..-.+| +.-|+..+.++-++...-+|||.|.
T Consensus 98 p~~l~~----------~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HY 167 (230)
T COG1768 98 PPILFY----------LNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHY 167 (230)
T ss_pred CchHhh----------hccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEec
Confidence 111000 0112566665555543322 12222222 2333432222222334458999999
Q ss_pred CcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 383 PWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 383 P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
|+.+..... ..+.+++++++|+.++.||.|-
T Consensus 168 PP~s~~~t~--------~~~sevlee~rv~~~lyGHlHg 198 (230)
T COG1768 168 PPFSDDGTP--------GPFSEVLEEGRVSKCLYGHLHG 198 (230)
T ss_pred CCCCCCCCC--------cchHHHHhhcceeeEEeeeccC
Confidence 998864332 2456788899999999999994
No 46
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.87 E-value=2.2e-08 Score=88.71 Aligned_cols=37 Identities=24% Similarity=0.346 Sum_probs=27.5
Q ss_pred eEEEEEecCCCCCChHHH-HHHHHhC-CCCEEEEcCCcc
Q 014557 209 SRIAIVGDVGLTYNTTST-VSHMISN-RPDLILLVGDVT 245 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~~~~-~~~l~~~-~pDfvl~~GDl~ 245 (422)
+||+++||+|......+. ++.+... ++|.|+++||++
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~ 39 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT 39 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC
Confidence 589999999976543333 3444445 899999999997
No 47
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.86 E-value=9.6e-09 Score=92.39 Aligned_cols=28 Identities=25% Similarity=0.427 Sum_probs=23.0
Q ss_pred EEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 377 VATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 377 Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
|++.|.|.+. ++.+.+++++|+||+|-+
T Consensus 119 i~l~H~p~~~------------------~~~~~~~~~~lsGH~H~~ 146 (171)
T cd07384 119 ILLTHIPLYR------------------LLDTIKPVLILSGHDHDQ 146 (171)
T ss_pred eeEECCccHH------------------HHhccCceEEEeCcccCC
Confidence 8889999631 667789999999999964
No 48
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.82 E-value=8.2e-08 Score=90.57 Aligned_cols=73 Identities=16% Similarity=0.317 Sum_probs=46.3
Q ss_pred EEEecCCCCCCh----HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhh
Q 014557 212 AIVGDVGLTYNT----TSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (422)
Q Consensus 212 ~v~gD~~~~~~~----~~~~~~l~~--~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (422)
+++||+|.+... ...++.+.+ .+||+|+++||+++. +. |.. . . ......+.+.++
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~--~~--~~~-----------~-~---~~~~~~~~~~l~ 62 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEA--WI--GDD-----------D-P---STLARSVAQAIR 62 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceecc--cc--CCC-----------C-C---CHHHHHHHHHHH
Confidence 689999987542 234555543 379999999999942 11 110 0 0 111234445566
Q ss_pred hhhc-CCcEEEecCCcccc
Q 014557 286 PVLS-KVPIMVVEGNHEYE 303 (422)
Q Consensus 286 ~l~~-~iP~~~v~GNHD~~ 303 (422)
.+.. .+|+++++||||..
T Consensus 63 ~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 63 QVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred HHHHCCCeEEEEcCCCchh
Confidence 6643 58999999999975
No 49
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.75 E-value=1e-07 Score=90.83 Aligned_cols=171 Identities=16% Similarity=0.141 Sum_probs=88.1
Q ss_pred eEEEEEecCCCCC------Ch----HHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHH
Q 014557 209 SRIAIVGDVGLTY------NT----TSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRW 277 (422)
Q Consensus 209 ~rf~v~gD~~~~~------~~----~~~~~~l~~~~pD-fvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~w 277 (422)
++|++++|+|... .. ...++++.+.+|| +++.+||++...... + + ...
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~-------------------~-~-~~~ 59 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPS-------------------T-A-TKG 59 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccch-------------------h-c-cCC
Confidence 5899999999554 11 3456677667788 789999998432110 0 0 001
Q ss_pred HHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCC---C----C---CCCCCcceEEEEeCcEEE--EEE
Q 014557 278 DYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K----E---SGSLSKFYYSFNAGGIHF--LML 345 (422)
Q Consensus 278 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~---~~~~~~~yysf~~g~v~f--i~L 345 (422)
....+.+..+ -.-++++||||+.... ..+.........|. + . .......|.-++.+++++ +++
T Consensus 60 ~~~~~~l~~~---g~d~~~~GNHe~d~g~--~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~ 134 (252)
T cd00845 60 EANIELMNAL---GYDAVTIGNHEFDYGL--DALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGL 134 (252)
T ss_pred cHHHHHHHhc---CCCEEeeccccccccH--HHHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEe
Confidence 1222333332 2345678999986332 12222222222211 0 0 011123355678888554 444
Q ss_pred eccccCC----------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH-cCCcEE
Q 014557 346 AAYVSFD----------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVV 414 (422)
Q Consensus 346 dt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~Vdlv 414 (422)
....... ......+.+++..+.. +.+...+|++.|.+.... . ++.++ .+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vIvl~H~g~~~~------------~---~la~~~~giDlv 198 (252)
T cd00845 135 TTPDTPTYTPLGWIIGLPFEDLAEAVAVAEELL-AEGADVIILLSHLGLDDD------------E---ELAEEVPGIDVI 198 (252)
T ss_pred ccccceeecCCCcccCceecCHHHHHHHHHHHH-hCCCCEEEEEeccCccch------------H---HHHhcCCCccEE
Confidence 4321100 0012233343322222 245677999999876430 1 12222 589999
Q ss_pred EEccccC
Q 014557 415 FNGHVSE 421 (422)
Q Consensus 415 lsGH~H~ 421 (422)
|+||.|.
T Consensus 199 lggH~H~ 205 (252)
T cd00845 199 LGGHTHH 205 (252)
T ss_pred EcCCcCc
Confidence 9999996
No 50
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.73 E-value=2.4e-08 Score=90.80 Aligned_cols=61 Identities=26% Similarity=0.444 Sum_probs=36.8
Q ss_pred HHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh-hhh---------------h
Q 014557 226 TVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM-QPV---------------L 288 (422)
Q Consensus 226 ~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l-~~l---------------~ 288 (422)
.++.+. ..+||.|+++|||... ++.+ .++|+.+...|.+.+ .+- .
T Consensus 35 ~~~~~~~~l~Pd~V~fLGDLfd~-~w~~-----------------D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~ 96 (193)
T cd08164 35 IVSMMQFWLKPDAVVVLGDLFSS-QWID-----------------DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFED 96 (193)
T ss_pred HHHHHHHhcCCCEEEEeccccCC-Cccc-----------------HHHHHHHHHHHHHHhcCCccccccccccccccccc
Confidence 344444 3699999999999942 2311 123344444444433 110 1
Q ss_pred cCCcEEEecCCccccc
Q 014557 289 SKVPIMVVEGNHEYEE 304 (422)
Q Consensus 289 ~~iP~~~v~GNHD~~~ 304 (422)
..+|++.++||||++.
T Consensus 97 ~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 97 GKTPLINIAGNHDVGY 112 (193)
T ss_pred CCceEEEECCcccCCC
Confidence 2489999999999964
No 51
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.73 E-value=2.9e-08 Score=87.38 Aligned_cols=35 Identities=26% Similarity=0.471 Sum_probs=24.4
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~y 246 (422)
|++++||+|..... .+.++.+ .++|.|+++||+++
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~--~~~d~ii~~GD~~~ 36 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELF--GDVDLIIHAGDVLY 36 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHh--cCCCEEEECCcccc
Confidence 68999999976421 2223332 23999999999984
No 52
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.72 E-value=8.2e-08 Score=97.32 Aligned_cols=40 Identities=25% Similarity=0.286 Sum_probs=30.5
Q ss_pred CeEEEEEecCCCCCCh---------H----HHHHHHHhCCCCEEEEcCCcccc
Q 014557 208 PSRIAIVGDVGLTYNT---------T----STVSHMISNRPDLILLVGDVTYA 247 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~---------~----~~~~~l~~~~pDfvl~~GDl~ya 247 (422)
.+||++++|+|++... . .+++.+.+.++|+||++||+...
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~ 55 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHE 55 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCC
Confidence 5899999999987421 2 23444556899999999999964
No 53
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.68 E-value=4.2e-07 Score=82.26 Aligned_cols=37 Identities=11% Similarity=0.367 Sum_probs=25.9
Q ss_pred EEEEEecCCCCCChH---HHHHHHHh-CCCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNTT---STVSHMIS-NRPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~~---~~~~~l~~-~~pDfvl~~GDl~y 246 (422)
+|+++||+|...... ..+.++.+ .++|.|+|+||+++
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~ 41 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS 41 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC
Confidence 489999999654322 23333433 57999999999984
No 54
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.66 E-value=6.7e-07 Score=86.65 Aligned_cols=184 Identities=15% Similarity=0.156 Sum_probs=91.9
Q ss_pred eEEEEEecCCCCCC-----------------hHHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCcccccCCCCCCc
Q 014557 209 SRIAIVGDVGLTYN-----------------TTSTVSHMISNRPDLILL-VGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (422)
Q Consensus 209 ~rf~v~gD~~~~~~-----------------~~~~~~~l~~~~pDfvl~-~GDl~yad~~~~~g~~~~~y~~~~~~~~~~ 270 (422)
++|++.+|+|.... ....++++.+.+|+.+++ +||++....+ .
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~-------------------~ 61 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPL-------------------A 61 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHH-------------------H
Confidence 47889999986521 123456666667887776 9999853210 0
Q ss_pred cchh-----hHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCC---C----C-CCCCCcceEEEEe
Q 014557 271 ETYQ-----PRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K----E-SGSLSKFYYSFNA 337 (422)
Q Consensus 271 e~y~-----~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~-~~~~~~~yysf~~ 337 (422)
.+. .......+.|+.+ ... +.++||||+... ...+........+|. + . .......|.-++.
T Consensus 62 -~~~~~~~~~~~~~~~~~ln~~--g~d-~~~lGNHe~d~g--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~ 135 (277)
T cd07410 62 -DYYAKIEDGDPHPMIAAMNAL--GYD-AGTLGNHEFNYG--LDYLDKVIKQANFPVLSANVIDADTGEPFLKPYVILER 135 (277)
T ss_pred -HHhhhcccCCCChHHHHHHhc--CCC-EEeecccCcccC--HHHHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEe
Confidence 000 0001233444444 333 556799998632 122222222222221 0 0 0112234666788
Q ss_pred C-cEEEEEEeccccCC-----C-------CHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHH
Q 014557 338 G-GIHFLMLAAYVSFD-----K-------SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 404 (422)
Q Consensus 338 g-~v~fi~Ldt~~~~~-----~-------~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ 404 (422)
+ ++++-++.-..... . -.+-.+.+++.+++.+..+...+|+++|........... ..+....+
T Consensus 136 ~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~IIvl~H~g~~~~~~~~~----~~~~~~~~ 211 (277)
T cd07410 136 DVGVKVGIIGLTTPQIPNWEKPNLIGGLKFTDPVETAKKYVPKLRAEGADVVVVLAHGGFERDLEESL----TGENAAYE 211 (277)
T ss_pred cCCCEEEEEecCCcccccccCcccCCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecCCcCCCccccc----CCccHHHH
Confidence 8 86655544221110 0 011122334434433323567899999988754321000 11122234
Q ss_pred HHHH-cCCcEEEEccccC
Q 014557 405 LLYK-YGVDVVFNGHVSE 421 (422)
Q Consensus 405 ll~~-~~VdlvlsGH~H~ 421 (422)
+.++ -+||++|+||.|.
T Consensus 212 la~~~~~vD~IlgGHsH~ 229 (277)
T cd07410 212 LAEEVPGIDAILTGHQHR 229 (277)
T ss_pred HHhcCCCCcEEEeCCCcc
Confidence 4455 4899999999996
No 55
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.60 E-value=1.8e-07 Score=86.83 Aligned_cols=181 Identities=16% Similarity=0.191 Sum_probs=88.8
Q ss_pred EEEecCCCCCChH---HHHHHHHh----CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh
Q 014557 212 AIVGDVGLTYNTT---STVSHMIS----NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (422)
Q Consensus 212 ~v~gD~~~~~~~~---~~~~~l~~----~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l 284 (422)
+++||+|.+.... .....+.+ .++|.++++||+++. +..... ...+.+ ...+...+
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~--~~~~~~------------~~~~~~---~~~~~~l~ 63 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDL--WFGDDE------------VVPPAA---HEVLAALL 63 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEE--EecCCC------------CCChHH---HHHHHHHH
Confidence 4799999885432 22333332 489999999999942 110000 000111 11123444
Q ss_pred hhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEEeccccCCCCHhHHHHHHHH
Q 014557 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAYVSFDKSGDQYKWLEED 364 (422)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 364 (422)
+.....++++.++||||..... + +..+..... .......+.+++.+++++.+.. ++.....+.|+...
T Consensus 64 ~~~~~~~~v~~v~GNHD~~~~~----~--~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~ 131 (217)
T cd07398 64 RLADRGTRVYYVPGNHDFLLGD----F--FAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRL 131 (217)
T ss_pred HHHHCCCeEEEECCCchHHHHh----H--HHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHH
Confidence 4556689999999999985321 0 111111000 0111115777888888887642 33344455555543
Q ss_pred HHhcccC------CCCE--EEEEeCCC----cccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 365 LANVERE------VTPW--LVATWHAP----WYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 365 L~~~~~~------~~~w--~Iv~~H~P----~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
+...... ...| .+...... ............+...+.+.+++.+++++++++||+|.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~ 200 (217)
T cd07398 132 GRNPYDQLLFLNRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHR 200 (217)
T ss_pred hCcHHHHHHHhcchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 2211000 0000 00000000 00000000111223456677778889999999999996
No 56
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.58 E-value=2e-07 Score=94.81 Aligned_cols=74 Identities=20% Similarity=0.343 Sum_probs=51.3
Q ss_pred eEEEEEecCCCCC---Ch-----------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchh
Q 014557 209 SRIAIVGDVGLTY---NT-----------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQ 274 (422)
Q Consensus 209 ~rf~v~gD~~~~~---~~-----------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~ 274 (422)
+||++.+|+|++. +. ...++.+.+.++||||++||+.+.+ . |..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~------~------------Ps~~--- 59 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTN------N------------PSPR--- 59 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCC------C------------CCHH---
Confidence 5899999999992 11 1245566678999999999999532 1 1111
Q ss_pred hHHHHHHHhhhhh-hcCCcEEEecCCccccc
Q 014557 275 PRWDYWGRYMQPV-LSKVPIMVVEGNHEYEE 304 (422)
Q Consensus 275 ~~wd~~~~~l~~l-~~~iP~~~v~GNHD~~~ 304 (422)
.-..+.+.++.+ ..++|++++.||||...
T Consensus 60 -a~~~~~~~l~~l~~~~Ipv~~I~GNHD~~~ 89 (390)
T COG0420 60 -ALKLFLEALRRLKDAGIPVVVIAGNHDSPS 89 (390)
T ss_pred -HHHHHHHHHHHhccCCCcEEEecCCCCchh
Confidence 123344555665 35899999999999864
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.55 E-value=1.3e-06 Score=83.86 Aligned_cols=172 Identities=17% Similarity=0.168 Sum_probs=89.8
Q ss_pred eEEEEEecCCCCCC-----------hHHHHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhH
Q 014557 209 SRIAIVGDVGLTYN-----------TTSTVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPR 276 (422)
Q Consensus 209 ~rf~v~gD~~~~~~-----------~~~~~~~l~~~~pD-fvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~ 276 (422)
++|++++|+|.-.. ....++++.+.+|+ +++.+||++..... .. + .+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~-------------------~~-~-~~ 59 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLL-------------------ST-A-TK 59 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccc-------------------hh-h-cC
Confidence 47888888873111 12345666666788 99999999842110 00 0 01
Q ss_pred HHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCC---C-------CCCCCCcceEEEEeCcEE--EEE
Q 014557 277 WDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K-------ESGSLSKFYYSFNAGGIH--FLM 344 (422)
Q Consensus 277 wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~-------~~~~~~~~yysf~~g~v~--fi~ 344 (422)
.....+.|+.+ .. -+.++||||+.... ..+........+|. | +....-..|.-++.++++ ||+
T Consensus 60 g~~~~~~l~~l--~~-d~~~~GNHefd~g~--~~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG 134 (257)
T cd07406 60 GKQMVPVLNAL--GV-DLACFGNHEFDFGE--DQLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLG 134 (257)
T ss_pred CccHHHHHHhc--CC-cEEeecccccccCH--HHHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEE
Confidence 11223344443 22 35689999985321 22222222222211 0 000112467778889865 455
Q ss_pred EeccccC------C---CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEE
Q 014557 345 LAAYVSF------D---KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVV 414 (422)
Q Consensus 345 Ldt~~~~------~---~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdlv 414 (422)
+-+.... . .-.+-.+.+++.+++..+.+...+|++.|.+.... . ++.++. +||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~d------------~---~la~~~~~iD~I 199 (257)
T cd07406 135 LVEEEWLETLTIDPEYVRYRDYVETARELVDELREQGADLIIALTHMRLPND------------K---RLAREVPEIDLI 199 (257)
T ss_pred EecccccccccCCCCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchhh------------H---HHHHhCCCCceE
Confidence 5443211 0 01233344555554444456778999999875211 1 233333 89999
Q ss_pred EEccccC
Q 014557 415 FNGHVSE 421 (422)
Q Consensus 415 lsGH~H~ 421 (422)
|+||.|.
T Consensus 200 lgGH~H~ 206 (257)
T cd07406 200 LGGHDHE 206 (257)
T ss_pred Eecccce
Confidence 9999996
No 58
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.55 E-value=1.9e-06 Score=82.56 Aligned_cols=185 Identities=20% Similarity=0.260 Sum_probs=96.7
Q ss_pred EEEEecCCCCCChH-HHHHHHHh---CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhh
Q 014557 211 IAIVGDVGLTYNTT-STVSHMIS---NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (422)
Q Consensus 211 f~v~gD~~~~~~~~-~~~~~l~~---~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (422)
|+|.||.|.....- ..++.+.+ .++|++|++||+.-. + +....++- .....| ..+..|.+.++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~--~--~~~d~~~~-------~~p~k~-~~~~~f~~~~~g 68 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAV--R--NEADLKCM-------AVPPKY-RKMGDFYKYYSG 68 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCc--C--Ccchhhhh-------ccchhh-hhhhhHHHHhcC
Confidence 58999999753221 12333332 469999999999621 0 11100000 001112 124445454444
Q ss_pred h-hcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceE-----EEEeCcEEEEEEecccc---CCC----
Q 014557 287 V-LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYY-----SFNAGGIHFLMLAAYVS---FDK---- 353 (422)
Q Consensus 287 l-~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yy-----sf~~g~v~fi~Ldt~~~---~~~---- 353 (422)
. ...+|+++|.||||.... +.. ++..+ ....+.+| .++++|++|..|..... +..
T Consensus 69 ~~~~p~~t~fi~GNHE~~~~-----l~~------l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~ 136 (262)
T cd00844 69 EKKAPILTIFIGGNHEASNY-----LWE------LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFE 136 (262)
T ss_pred CccCCeeEEEECCCCCCHHH-----HHh------hcCCC-eecCcEEEecCCCEEEECCeEEEEeccccccccccccccc
Confidence 3 357888999999995311 111 11100 00123332 46678999999986321 111
Q ss_pred ----CHhHHHHHH-------HHHHhcccCCCCEEEEEeCCCcccCCcccccc------------h---HHHHHHHHHHHH
Q 014557 354 ----SGDQYKWLE-------EDLANVEREVTPWLVATWHAPWYSTYKAHYRE------------A---ECMRVAMEDLLY 407 (422)
Q Consensus 354 ----~~~Q~~WL~-------~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~------------~---~~~r~~l~~ll~ 407 (422)
...+...+. +.|.... .+--|+++|.|+.......... . ......+.++++
T Consensus 137 ~~~~t~~~~rs~y~~r~~~~~kl~~~~---~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~ 213 (262)
T cd00844 137 RPPYSEDTKRSAYHVRNIEVFKLKQLK---QPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLK 213 (262)
T ss_pred CCCCCHHHHHHhhhhhHHHHHHHHhcC---CCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHH
Confidence 233333211 1122221 1225889999987653211100 0 112356779999
Q ss_pred HcCCcEEEEccccCC
Q 014557 408 KYGVDVVFNGHVSES 422 (422)
Q Consensus 408 ~~~VdlvlsGH~H~y 422 (422)
+.+...+|+||.|.+
T Consensus 214 ~lkPryhf~gH~H~~ 228 (262)
T cd00844 214 HLKPRYWFSAHLHVK 228 (262)
T ss_pred HhCCCEEEEecCCcc
Confidence 999999999999973
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.53 E-value=1.3e-06 Score=87.19 Aligned_cols=74 Identities=15% Similarity=0.207 Sum_probs=46.7
Q ss_pred eEEEEEecCCCCCCh---------HH----HHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh
Q 014557 209 SRIAIVGDVGLTYNT---------TS----TVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~---------~~----~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~ 275 (422)
+||+++||+|++... .. .++.+.+++||+|+++||+..... . +. ..
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~----~-------------~~----~~ 59 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRK----A-------------IT----QN 59 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCC----C-------------CC----HH
Confidence 589999999987432 12 334445689999999999984210 0 00 11
Q ss_pred HHHHHHH-hhhhh-hcCCcEEEecCCcccc
Q 014557 276 RWDYWGR-YMQPV-LSKVPIMVVEGNHEYE 303 (422)
Q Consensus 276 ~wd~~~~-~l~~l-~~~iP~~~v~GNHD~~ 303 (422)
......+ +++.+ ...+|+++++||||..
T Consensus 60 ~~~~~~~~l~~~L~~~gi~v~~I~GNHD~~ 89 (340)
T PHA02546 60 TMNFVREKIFDLLKEAGITLHVLVGNHDMY 89 (340)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEccCCCcc
Confidence 1122222 23344 2479999999999974
No 60
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.48 E-value=1.8e-06 Score=83.03 Aligned_cols=154 Identities=18% Similarity=0.189 Sum_probs=77.8
Q ss_pred HHHHHHhC-CCCEE-EEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 226 TVSHMISN-RPDLI-LLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 226 ~~~~l~~~-~pDfv-l~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
.++++.+. ++|.+ +.+||+...... . +..+.....+.|.. +++.++.||||+.
T Consensus 41 ~v~~~~~~~~~~~l~l~~GD~~~gs~~-------------------~--~~~~g~~~~~~l~~----~g~da~~GNHefd 95 (264)
T cd07411 41 LIKRIRAERNPNTLLLDGGDTWQGSGE-------------------A--LYTRGQAMVDALNA----LGVDAMVGHWEFT 95 (264)
T ss_pred HHHHHHHhcCCCeEEEeCCCccCCChH-------------------H--hhcCChhHHHHHHh----hCCeEEecccccc
Confidence 45666556 89977 579999943210 0 00111222333333 4455555999986
Q ss_pred cccccccchhcccccCCCC---C----CCC-CCCcceEEEEeCcEE--EEEEeccccCC--C--------CHhHHHHHHH
Q 014557 304 EQAENRTFVAYTSRFAFPS---K----ESG-SLSKFYYSFNAGGIH--FLMLAAYVSFD--K--------SGDQYKWLEE 363 (422)
Q Consensus 304 ~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yysf~~g~v~--fi~Ldt~~~~~--~--------~~~Q~~WL~~ 363 (422)
.. ...+....+...+|. + +.+ ..-..|.-++.++++ ||++.+..... . .....+.+++
T Consensus 96 ~g--~~~l~~~~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T cd07411 96 YG--PERVRELFGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQE 173 (264)
T ss_pred cC--HHHHHHHHhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHH
Confidence 32 222232333333221 0 000 111235567888855 55554421100 0 1233455555
Q ss_pred HHHhcc-cCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH-cCCcEEEEccccC
Q 014557 364 DLANVE-REVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVSE 421 (422)
Q Consensus 364 ~L~~~~-~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ 421 (422)
.+++.. +.+...+|++.|.+.... . ++.++ .+||++|+||.|.
T Consensus 174 ~~~~~~~~~~~D~iI~l~H~g~~~~------------~---~la~~~~~iDlilgGH~H~ 218 (264)
T cd07411 174 VVVKLRREEGVDVVVLLSHNGLPVD------------V---ELAERVPGIDVILSGHTHE 218 (264)
T ss_pred HHHHHHHhCCCCEEEEEecCCchhh------------H---HHHhcCCCCcEEEeCcccc
Confidence 544432 245678999999875321 1 23333 4799999999995
No 61
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.48 E-value=1.7e-06 Score=82.99 Aligned_cols=178 Identities=20% Similarity=0.236 Sum_probs=88.6
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHH
Q 014557 209 SRIAIVGDVGLTYNT-----------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRW 277 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-----------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~w 277 (422)
++|++++|+|..... ...++++.+.++++++.+||++.. . +.... ...
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~g-------s------------~~~~~--~~g 59 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQG-------L------------PISDL--DKG 59 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCC-------c------------hhhhh--cCC
Confidence 489999999964321 223444544457899999999842 2 00000 011
Q ss_pred HHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCCC-------CCCC-CCcceEEEEeC-cEE--EEEEe
Q 014557 278 DYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSK-------ESGS-LSKFYYSFNAG-GIH--FLMLA 346 (422)
Q Consensus 278 d~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~-------~~~~-~~~~yysf~~g-~v~--fi~Ld 346 (422)
....+.|..+ ..-+ .++||||+... ...+..+.+...+|.- +.+. .-..|.-++.+ +++ ||++-
T Consensus 60 ~~~~~~ln~~--g~d~-~~~GNHefd~G--~~~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~ 134 (257)
T cd07408 60 ETIIKIMNAV--GYDA-VTPGNHEFDYG--LDRLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLT 134 (257)
T ss_pred cHHHHHHHhc--CCcE-EccccccccCC--HHHHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeec
Confidence 1223334333 4445 46799998632 2333333333333321 0010 11224455777 644 55554
Q ss_pred cccc-C--CC-------CHhHHHHHHHH-HHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH-cCCcEE
Q 014557 347 AYVS-F--DK-------SGDQYKWLEED-LANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVV 414 (422)
Q Consensus 347 t~~~-~--~~-------~~~Q~~WL~~~-L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~Vdlv 414 (422)
+... . .+ -.+-.+-+++. .....+.+...+|++.|.+....... +. .. ++.++ -+||++
T Consensus 135 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~~-~~-----~~---~la~~~~giDvI 205 (257)
T cd07408 135 TPETATKTHPKNVKDVTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSSP-WT-----ST---ELAANVTGIDLI 205 (257)
T ss_pred CcCcccccCccccCCcEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCCC-cc-----HH---HHHHhCCCceEE
Confidence 4210 0 00 01122334443 23322345678999999887543211 11 11 22333 389999
Q ss_pred EEccccC
Q 014557 415 FNGHVSE 421 (422)
Q Consensus 415 lsGH~H~ 421 (422)
|.||.|.
T Consensus 206 igGH~H~ 212 (257)
T cd07408 206 IDGHSHT 212 (257)
T ss_pred EeCCCcc
Confidence 9999996
No 62
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.39 E-value=6e-06 Score=80.54 Aligned_cols=62 Identities=16% Similarity=0.158 Sum_probs=35.3
Q ss_pred HHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH--cCCcEEEEccccC
Q 014557 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK--YGVDVVFNGHVSE 421 (422)
Q Consensus 358 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~--~~VdlvlsGH~H~ 421 (422)
.+-+++.+++.+..+...+|++.|........... .+.......+++.+ -+||++++||.|.
T Consensus 177 ~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~ 240 (288)
T cd07412 177 VEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQ 240 (288)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCc
Confidence 34455555555434677899999987653221100 00111122344444 3799999999996
No 63
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.30 E-value=1.3e-05 Score=77.84 Aligned_cols=155 Identities=19% Similarity=0.292 Sum_probs=80.2
Q ss_pred HHHHHHhCCCC-EEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhcCCcEEEecCCccccc
Q 014557 226 TVSHMISNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEE 304 (422)
Q Consensus 226 ~~~~l~~~~pD-fvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~ 304 (422)
.++++.+.+++ +++.+||+...... ...+ +.....+.|..+ ..-+ .++||||+..
T Consensus 40 ~v~~~r~~~~~~l~ld~GD~~~gs~~-------------------~~~~--~g~~~~~~ln~~--g~D~-~~lGNHefd~ 95 (281)
T cd07409 40 LVKELRAENPNVLFLNAGDAFQGTLW-------------------YTLY--KGNADAEFMNLL--GYDA-MTLGNHEFDD 95 (281)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCcch-------------------hhhc--CChHHHHHHHhc--CCCE-EEeccccccC
Confidence 45555555677 56669999842211 0000 112223444444 4444 4579999964
Q ss_pred ccccccchhcccccCCCCCC------C-----CCCCcceEEEEeCcEE--EEEEeccccC---C--C---CHhHHHHHHH
Q 014557 305 QAENRTFVAYTSRFAFPSKE------S-----GSLSKFYYSFNAGGIH--FLMLAAYVSF---D--K---SGDQYKWLEE 363 (422)
Q Consensus 305 ~~~~~~~~~y~~~f~~P~~~------~-----~~~~~~yysf~~g~v~--fi~Ldt~~~~---~--~---~~~Q~~WL~~ 363 (422)
.. ..+..+.....+|.-. . ...-..|.-++.++++ ||++-+.... . . -.+..+.+++
T Consensus 96 G~--~~l~~~~~~~~~p~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~ 173 (281)
T cd07409 96 GV--EGLAPFLNNLKFPVLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQK 173 (281)
T ss_pred CH--HHHHHHHHhCCCCEEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHH
Confidence 32 2233232222222110 0 0112345667888865 4555432110 0 1 1234456777
Q ss_pred HHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH-cCCcEEEEccccC
Q 014557 364 DLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK-YGVDVVFNGHVSE 421 (422)
Q Consensus 364 ~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ 421 (422)
.+++.+.++...+|++.|..... .. ++.++ -+||++++||.|.
T Consensus 174 ~v~~lr~~~~D~II~l~H~G~~~------------d~---~la~~~~giD~IiggH~H~ 217 (281)
T cd07409 174 EADKLKAQGVNKIIALSHSGYEV------------DK---EIARKVPGVDVIVGGHSHT 217 (281)
T ss_pred HHHHHHhcCCCEEEEEeccCchh------------HH---HHHHcCCCCcEEEeCCcCc
Confidence 77666545677899999976421 01 23333 3899999999996
No 64
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.26 E-value=4.6e-05 Score=74.04 Aligned_cols=181 Identities=17% Similarity=0.233 Sum_probs=89.9
Q ss_pred CeEEEEEecCCCCCCh--------------HHHHHHHH----hCCCC-EEEEcCCcccccccccCCCCCCcccccCCCCC
Q 014557 208 PSRIAIVGDVGLTYNT--------------TSTVSHMI----SNRPD-LILLVGDVTYANLYLTNGTGSDCYACSFANSP 268 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~--------------~~~~~~l~----~~~pD-fvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~ 268 (422)
.++|++.+|+|..... .+.++++. +.+++ +++..||... |+ +
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~q-------Gs------------~ 65 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHD-------GN------------G 65 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccC-------Ce------------e
Confidence 5899999999964210 12234332 23555 6788999984 22 1
Q ss_pred CccchhhHHHHHHHhhhhhhcCCcEEEecCCccccccccc-ccchhcccccCCCC---C-----CCC---CCCcceEEEE
Q 014557 269 IHETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPS---K-----ESG---SLSKFYYSFN 336 (422)
Q Consensus 269 ~~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~---~-----~~~---~~~~~yysf~ 336 (422)
+...+..++....+.|..+ .. =..++||||+...... ..+..+.....+|. | +.. .....|.-++
T Consensus 66 ~~~~~~~~g~~~~~~mN~m--gy-Da~tlGNHEFd~g~~~l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~ 142 (282)
T cd07407 66 LSDASPPPGSYSNPIFRMM--PY-DLLTIGNHELYNYEVADDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFT 142 (282)
T ss_pred ceeeecCCChHHHHHHHhc--CC-cEEeecccccCccccHHHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEE
Confidence 1111111233344555554 11 2468999999532111 11111212112221 0 000 1112355667
Q ss_pred eC-cEE--EEEEecccc-------CCC--CHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHH
Q 014557 337 AG-GIH--FLMLAAYVS-------FDK--SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMED 404 (422)
Q Consensus 337 ~g-~v~--fi~Ldt~~~-------~~~--~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ 404 (422)
.+ +++ ||++-+... +.. ...+.+|+.+.|++ .+...+|+++|....... +. .+....
T Consensus 143 ~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~~---~~~~~~ 211 (282)
T cd07407 143 TKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----EF---KVLHDA 211 (282)
T ss_pred cCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----cH---HHHHHH
Confidence 76 755 555543211 001 12233477777764 346679999998864321 11 111123
Q ss_pred HHHHc-CCc-EEEEccccC
Q 014557 405 LLYKY-GVD-VVFNGHVSE 421 (422)
Q Consensus 405 ll~~~-~Vd-lvlsGH~H~ 421 (422)
+.++. ++| ++|.||.|.
T Consensus 212 la~~~~~id~~Ii~GHsH~ 230 (282)
T cd07407 212 IRKIFPDTPIQFLGGHSHV 230 (282)
T ss_pred HHHhCCCCCEEEEeCCccc
Confidence 34444 577 799999994
No 65
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.23 E-value=2.9e-05 Score=89.39 Aligned_cols=182 Identities=18% Similarity=0.215 Sum_probs=95.0
Q ss_pred cCeEEEEEecCCCCCCh----HHHHHHHHhCCCCEEEE-cCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHH
Q 014557 207 YPSRIAIVGDVGLTYNT----TSTVSHMISNRPDLILL-VGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG 281 (422)
Q Consensus 207 ~~~rf~v~gD~~~~~~~----~~~~~~l~~~~pDfvl~-~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~ 281 (422)
..++|++++|+|..... ...++++.+.+|+.+++ +||++.. . +.... .+.....
T Consensus 659 ~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~g-------s------------~~~~~--~~g~~~~ 717 (1163)
T PRK09419 659 WELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQG-------S------------LYSNL--LKGLPVL 717 (1163)
T ss_pred eEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCC-------c------------chhhh--cCChHHH
Confidence 46999999999965422 23456666678887765 9999842 2 00000 0112233
Q ss_pred HhhhhhhcCCcEEEecCCcccccccccccchhcccc--------------cCCCC-C----CCCC---CCcceEEEEeCc
Q 014557 282 RYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSR--------------FAFPS-K----ESGS---LSKFYYSFNAGG 339 (422)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~--------------f~~P~-~----~~~~---~~~~yysf~~g~ 339 (422)
+.|..+ . .-+.++||||+.... ..+..+... |.+-. | ..+. ....|.-++.++
T Consensus 718 ~~ln~l--g-~d~~~~GNHEfd~g~--~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G 792 (1163)
T PRK09419 718 KMMKEM--G-YDASTFGNHEFDWGP--DVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNG 792 (1163)
T ss_pred HHHhCc--C-CCEEEecccccccCh--HHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECC
Confidence 444443 2 235599999986432 112111111 21110 0 0111 123466678888
Q ss_pred EE--EEEEeccc-cC--CC-------CHhHHHHHHHHHHhcc-cCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHH
Q 014557 340 IH--FLMLAAYV-SF--DK-------SGDQYKWLEEDLANVE-REVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLL 406 (422)
Q Consensus 340 v~--fi~Ldt~~-~~--~~-------~~~Q~~WL~~~L~~~~-~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll 406 (422)
++ ||++-+.. .. .+ -.+..+.+++..++.+ ..+...+|++.|......... .+ ....+|.
T Consensus 793 ~kIgiiGltt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~-----~~~~~lA 865 (1163)
T PRK09419 793 KKVGFIGLTTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GE-----ITGLELA 865 (1163)
T ss_pred EEEEEEEecccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--cc-----cHHHHHH
Confidence 55 55554321 00 00 1233344555555443 245778999999887532111 11 1223455
Q ss_pred HHc-CCcEEEEccccC
Q 014557 407 YKY-GVDVVFNGHVSE 421 (422)
Q Consensus 407 ~~~-~VdlvlsGH~H~ 421 (422)
++. +||++|.||.|.
T Consensus 866 ~~v~gIDvIigGHsH~ 881 (1163)
T PRK09419 866 KKVKGVDAIISAHTHT 881 (1163)
T ss_pred HhCCCCCEEEeCCCCc
Confidence 554 799999999996
No 66
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.22 E-value=1.9e-05 Score=70.92 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=29.2
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCccc
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTY 246 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~y 246 (422)
+||+++||+|..... ....+.....++|+|||+||.+.
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~ 40 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTS 40 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCC
Confidence 689999999987532 33444444679999999999994
No 67
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.18 E-value=5e-06 Score=79.56 Aligned_cols=73 Identities=22% Similarity=0.382 Sum_probs=48.2
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh
Q 014557 209 SRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~ 275 (422)
+||++++|+|++... ...++.+.+.++|+|+++||+.... . |. . .
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~------~------------p~--~--~ 58 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTA------N------------PP--A--E 58 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCC------C------------CC--H--H
Confidence 589999999987431 1234444567999999999999521 1 10 1 1
Q ss_pred HHHHHHHhhhhhhc-C-CcEEEecCCcccc
Q 014557 276 RWDYWGRYMQPVLS-K-VPIMVVEGNHEYE 303 (422)
Q Consensus 276 ~wd~~~~~l~~l~~-~-iP~~~v~GNHD~~ 303 (422)
....+.++++.+.. . +|+++++||||..
T Consensus 59 ~~~~~~~~l~~l~~~~~i~v~~i~GNHD~~ 88 (253)
T TIGR00619 59 AQELFNAFFRNLSDANPIPIVVISGNHDSA 88 (253)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEccCCCCh
Confidence 22334455555532 3 8999999999975
No 68
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.17 E-value=5.8e-05 Score=72.09 Aligned_cols=167 Identities=16% Similarity=0.271 Sum_probs=87.9
Q ss_pred EEEEEecCCCCCChHH---HHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhh
Q 014557 210 RIAIVGDVGLTYNTTS---TVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (422)
Q Consensus 210 rf~v~gD~~~~~~~~~---~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (422)
||+++||.=....... .+.++. +.++||++..||.+- .|.. +. ....+.|.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~------gg~g------------l~-------~~~~~~L~ 55 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAA------GGKG------------IT-------PKIAKELL 55 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCcccc------CCCC------------CC-------HHHHHHHH
Confidence 5889999855433332 344444 357999999999983 2211 10 11223333
Q ss_pred hhhcCCcEEEecCCcccccccccccchhccccc---CCCCCC-CCCCCcceEEEEeCcEEEEEEec--cccCCCCHhHHH
Q 014557 286 PVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRF---AFPSKE-SGSLSKFYYSFNAGGIHFLMLAA--YVSFDKSGDQYK 359 (422)
Q Consensus 286 ~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f---~~P~~~-~~~~~~~yysf~~g~v~fi~Ldt--~~~~~~~~~Q~~ 359 (422)
.+ .+-++ +.|||++... ....+.... -.|.+- .......|.-++.+++++-+++- .........-++
T Consensus 56 ~~--G~D~i-TlGNH~fD~g----el~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~ 128 (255)
T cd07382 56 SA--GVDVI-TMGNHTWDKK----EILDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFR 128 (255)
T ss_pred hc--CCCEE-EecccccCcc----hHHHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHH
Confidence 33 44444 5599998643 122222211 111110 01123457778888866555543 211111122234
Q ss_pred HHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 360 WLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 360 WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
-+++.+++.+. +...+||.+|.-..+ + +.++.. ...-+||+++.||+|.
T Consensus 129 ~~~~~v~~lk~-~~D~IIV~~H~g~ts---------E--k~ala~-~ldg~VdvIvGtHTHv 177 (255)
T cd07382 129 AADELLEELKE-EADIIFVDFHAEATS---------E--KIALGW-YLDGRVSAVVGTHTHV 177 (255)
T ss_pred HHHHHHHHHhc-CCCEEEEEECCCCCH---------H--HHHHHH-hCCCCceEEEeCCCCc
Confidence 46666666543 567899999974311 1 122221 1123699999999996
No 69
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.17 E-value=1.4e-05 Score=79.93 Aligned_cols=114 Identities=17% Similarity=0.318 Sum_probs=69.6
Q ss_pred CeEEEEEecCCCCCChH------------------HHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCC
Q 014557 208 PSRIAIVGDVGLTYNTT------------------STVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSP 268 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~------------------~~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~ 268 (422)
++|++.++|.|+-.+.. ..+.... ..+||.++++||+.+. |...+
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDe------G~~~~---------- 111 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDE------GQWAG---------- 111 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEecccccc------CccCC----------
Confidence 79999999999764221 1111111 2599999999999953 44211
Q ss_pred CccchhhHHHHHHHhhhhh---hcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceEEEEeCcEEEEEE
Q 014557 269 IHETYQPRWDYWGRYMQPV---LSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYYSFNAGGIHFLML 345 (422)
Q Consensus 269 ~~e~y~~~wd~~~~~l~~l---~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~L 345 (422)
.++|.+..+.++.+ ..++|.+.++||||++.... .......||.- ..++...+|++|+..|+++
T Consensus 112 -----~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDIGf~~~--~~~~~i~Rfe~------~fg~~~r~f~v~~~tf~~~ 178 (410)
T KOG3662|consen 112 -----DEEFKKRYERFKKIFGRKGNIKVIYIAGNHDIGFGNE--LIPEWIDRFES------VFGPTERRFDVGNLTFVMF 178 (410)
T ss_pred -----hHHHHHHHHHHHHhhCCCCCCeeEEeCCccccccccc--cchhHHHHHHH------hhcchhhhhccCCceeEEe
Confidence 23444433333333 34799999999999975321 11222233310 0123556799999999999
Q ss_pred ecccc
Q 014557 346 AAYVS 350 (422)
Q Consensus 346 dt~~~ 350 (422)
|++..
T Consensus 179 d~~~l 183 (410)
T KOG3662|consen 179 DSNAL 183 (410)
T ss_pred eehhh
Confidence 98743
No 70
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.11 E-value=4.7e-06 Score=77.38 Aligned_cols=21 Identities=19% Similarity=0.483 Sum_probs=18.8
Q ss_pred HHHHHHHHcCCcEEEEccccC
Q 014557 401 AMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 401 ~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.+.++|+.++.++++.||+|.
T Consensus 158 ~~~~~l~~~~~~~iv~GHTh~ 178 (208)
T cd07425 158 HLDKVLERLGAKRMVVGHTPQ 178 (208)
T ss_pred HHHHHHHHcCCCeEEEcCeee
Confidence 577889999999999999996
No 71
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.09 E-value=2.6e-05 Score=81.80 Aligned_cols=88 Identities=15% Similarity=0.317 Sum_probs=53.9
Q ss_pred cCeEEEEEecCCCCCCh------HHHHHHHH---------hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCcc
Q 014557 207 YPSRIAIVGDVGLTYNT------TSTVSHMI---------SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHE 271 (422)
Q Consensus 207 ~~~rf~v~gD~~~~~~~------~~~~~~l~---------~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e 271 (422)
.+++++++||+|.+... ...++.+. +.+++.++++||++...+... +... .+ ...+
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p-~~~~-----~~---~~~~ 312 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYP-GQEE-----EL---EIVD 312 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCc-cchh-----hc---cchh
Confidence 36899999999987542 12344444 457999999999995311000 0000 00 0001
Q ss_pred chhhHHHHHHHhhhhhhcCCcEEEecCCccccc
Q 014557 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEE 304 (422)
Q Consensus 272 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~ 304 (422)
.+ ...+.+.++++.+...+|+++++||||...
T Consensus 313 ~~-~~~~~l~~~L~~L~~~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 313 IY-EQYEAAAEYLKQIPEDIKIIISPGNHDAVR 344 (504)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEEecCCCcchh
Confidence 11 123455567777777899999999999753
No 72
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.08 E-value=0.00011 Score=71.46 Aligned_cols=185 Identities=22% Similarity=0.236 Sum_probs=87.4
Q ss_pred eEEEEEecCCCCCCh-----------HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCcccccCCCCCCccc
Q 014557 209 SRIAIVGDVGLTYNT-----------TSTVSHMISN----RP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHET 272 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-----------~~~~~~l~~~----~p-Dfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~ 272 (422)
++|++.+|+|..... ...++++.+. ++ -+++.+||+.. |+ +....
T Consensus 1 ltIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~-------Gs------------~~~~~ 61 (285)
T cd07405 1 ITILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINT-------GV------------PESDL 61 (285)
T ss_pred CEEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCC-------Cc------------hhHHh
Confidence 478999999875211 2345555432 33 48899999983 22 11111
Q ss_pred hhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhccc--ccCCCCC----CCC-CCCcceEEEEeCcEEE--E
Q 014557 273 YQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTS--RFAFPSK----ESG-SLSKFYYSFNAGGIHF--L 343 (422)
Q Consensus 273 y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~--~f~~P~~----~~~-~~~~~yysf~~g~v~f--i 343 (422)
++ .....+.|..+ ..-. .++||||+.... ..+..... .|.+... ..+ ..-..|.-++.+++++ |
T Consensus 62 ~~--g~~~~~~~n~~--g~Da-~~~GNHEfD~G~--~~L~~~~~~~~fp~l~aNv~~~~g~~~~~p~~i~~~~G~kIgvi 134 (285)
T cd07405 62 QD--AEPDFRGMNLV--GYDA-MAVGNHEFDNPL--EVLRQQMKWANFPLLSANIYQESGERLFKPYALFDLGGLKIAVI 134 (285)
T ss_pred cC--cchHHHHHHhh--CCcE-EeecccccccCH--HHHHHHHhhCCCCEEEEEEEecCCCCccCCeEEEEECCEEEEEE
Confidence 11 11122344444 3334 466999997432 22222222 1221111 001 1123456677888664 4
Q ss_pred EEecccc-C--CC----C---HhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcE
Q 014557 344 MLAAYVS-F--DK----S---GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDV 413 (422)
Q Consensus 344 ~Ldt~~~-~--~~----~---~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vdl 413 (422)
++-+... . .. + .+..+=+++.+++.+..+...+|++.|......... .........+.+.+...+||+
T Consensus 135 G~t~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~lk~~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~ 212 (285)
T cd07405 135 GLTTDDTAKIGNPAYFEGIEFRPPIHEAKEVVPELKQEKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDL 212 (285)
T ss_pred EecccccccccCcCCcCCcEEcCHHHHHHHHHHHHHHcCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCE
Confidence 4433210 0 00 0 112222333333332235667999999887532211 000001122323332358999
Q ss_pred EEEccccC
Q 014557 414 VFNGHVSE 421 (422)
Q Consensus 414 vlsGH~H~ 421 (422)
+|.||.|.
T Consensus 213 IigGHsH~ 220 (285)
T cd07405 213 IVGGHSQD 220 (285)
T ss_pred EEeCCCCc
Confidence 99999996
No 73
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.08 E-value=4e-05 Score=68.62 Aligned_cols=63 Identities=13% Similarity=0.226 Sum_probs=39.1
Q ss_pred EEEecCCCCCCh----------------HHHHHHHHh--CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccch
Q 014557 212 AIVGDVGLTYNT----------------TSTVSHMIS--NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (422)
Q Consensus 212 ~v~gD~~~~~~~----------------~~~~~~l~~--~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y 273 (422)
.+++|+|.+... ...++.+.+ .++|.|+++||++.. +.
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~------~~------------------ 57 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFG------GK------------------ 57 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCC------CC------------------
Confidence 468888887532 112344433 268999999999952 11
Q ss_pred hhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
...+ .+.++.+ ..|++.|+||||..
T Consensus 58 ~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 58 AGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred hHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 0111 3333333 46899999999964
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.03 E-value=1.6e-05 Score=81.24 Aligned_cols=74 Identities=23% Similarity=0.412 Sum_probs=47.3
Q ss_pred eEEEEEecCCCCCCh-------------HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh
Q 014557 209 SRIAIVGDVGLTYNT-------------TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-------------~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~ 275 (422)
+||++++|+|++... ...++.+.+.+||+||++||+... +. |. .+
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~------~~------------p~--~~-- 58 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT------GS------------PP--SY-- 58 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccC------CC------------Cc--HH--
Confidence 589999999987321 123344556899999999999942 11 10 11
Q ss_pred HHHHHHHhhhhhh-cCCcEEEecCCccccc
Q 014557 276 RWDYWGRYMQPVL-SKVPIMVVEGNHEYEE 304 (422)
Q Consensus 276 ~wd~~~~~l~~l~-~~iP~~~v~GNHD~~~ 304 (422)
....+.+++..+. ..+|+++++||||...
T Consensus 59 a~~~~~~~l~~L~~~~~~v~~I~GNHD~~~ 88 (407)
T PRK10966 59 ARELYNRFVVNLQQTGCQLVVLAGNHDSVA 88 (407)
T ss_pred HHHHHHHHHHHHHhcCCcEEEEcCCCCChh
Confidence 1122334444442 3689999999999753
No 75
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=98.01 E-value=5.6e-05 Score=73.46 Aligned_cols=184 Identities=21% Similarity=0.260 Sum_probs=103.9
Q ss_pred eEEEEEecCCCCCC-hHHHHHHHHhC---CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHh-
Q 014557 209 SRIAIVGDVGLTYN-TTSTVSHMISN---RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRY- 283 (422)
Q Consensus 209 ~rf~v~gD~~~~~~-~~~~~~~l~~~---~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~- 283 (422)
+||+|-|++|...+ -.+++..+.+. ++|++|.+||+--- .|+.+-.|- .+..-|+.. ..|.+.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQav----Rn~~D~~si-------avPpKy~~m-~~F~~YY 68 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAV----RNEQDLKSI-------AVPPKYRRM-GDFYKYY 68 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhh----cchhhcccc-------cCCHHHHHH-HHHHHHh
Confidence 58999999997643 34566666654 78999999998532 133322221 122233322 222222
Q ss_pred hhhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCCCCCCcceE-----EEEeCcEEEEEEecc---ccCCCC-
Q 014557 284 MQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKESGSLSKFYY-----SFNAGGIHFLMLAAY---VSFDKS- 354 (422)
Q Consensus 284 l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~~~~~~~yy-----sf~~g~v~fi~Ldt~---~~~~~~- 354 (422)
-.++.+.+|.+++-||||..+ |.. -+|..+ -...+.|| ...+||+++-+|.+- .+|.++
T Consensus 69 sge~~APVlTIFIGGNHEAsn---------yL~--eLpyGG-wVApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh 136 (456)
T KOG2863|consen 69 SGEIKAPVLTIFIGGNHEASN---------YLQ--ELPYGG-WVAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGH 136 (456)
T ss_pred CCcccCceeEEEecCchHHHH---------HHH--hcccCc-eeccceEEeeecceEEECCEEEeeccchhhhhhcccCC
Confidence 234567899999999999752 211 122211 11235666 367899999998863 233211
Q ss_pred --------------HhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchH-HH----------------HHHHH
Q 014557 355 --------------GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAE-CM----------------RVAME 403 (422)
Q Consensus 355 --------------~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~-~~----------------r~~l~ 403 (422)
..-++.=...|++. +.|--|+++|.-+.... .+.... .+ ...++
T Consensus 137 ~E~ppyn~stiRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~~ 211 (456)
T KOG2863|consen 137 FEWPPYNNSTIRSIYHVRISDVAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPALE 211 (456)
T ss_pred CCCCCccchhhhhhhhhhhhhhHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHHH
Confidence 00011111223333 33446888887543322 111111 11 24788
Q ss_pred HHHHHcCCcEEEEccccC
Q 014557 404 DLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 404 ~ll~~~~VdlvlsGH~H~ 421 (422)
+||++.+...+|+.|.|+
T Consensus 212 eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 212 ELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred HHHHHhCcchhhhhhHhh
Confidence 999999999999999995
No 76
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.99 E-value=2.1e-05 Score=73.07 Aligned_cols=72 Identities=13% Similarity=0.268 Sum_probs=42.4
Q ss_pred EEecCCCCCChHH---HHHHHH-hC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhh
Q 014557 213 IVGDVGLTYNTTS---TVSHMI-SN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (422)
Q Consensus 213 v~gD~~~~~~~~~---~~~~l~-~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (422)
++||+|++..... .+-..+ .. +.|-+.++||++. .|. |.. .+.+..++..+.+..
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~--g~~---------------~~~~~~~~V~~~l~~ 62 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWI--GDD---------------EPPQLHRQVAQKLLR 62 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhh--cCC---------------cccHHHHHHHHHHHH
Confidence 6899999844332 233333 23 4599999999994 332 220 011122233333333
Q ss_pred h-hcCCcEEEecCCcccc
Q 014557 287 V-LSKVPIMVVEGNHEYE 303 (422)
Q Consensus 287 l-~~~iP~~~v~GNHD~~ 303 (422)
+ ....|++.+.||||+.
T Consensus 63 ~a~~G~~v~~i~GN~Dfl 80 (237)
T COG2908 63 LARKGTRVYYIHGNHDFL 80 (237)
T ss_pred HHhcCCeEEEecCchHHH
Confidence 3 5569999999999964
No 77
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.90 E-value=0.00022 Score=75.29 Aligned_cols=184 Identities=15% Similarity=0.167 Sum_probs=99.2
Q ss_pred cCeEEEEEecCCCCCC------------h----HHHHHHHHhC-CCCEEEEcCCcccccccccCCCCCCcccccCCCCCC
Q 014557 207 YPSRIAIVGDVGLTYN------------T----TSTVSHMISN-RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPI 269 (422)
Q Consensus 207 ~~~rf~v~gD~~~~~~------------~----~~~~~~l~~~-~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~ 269 (422)
..++|++.+|+|.... . ...++++.+. +..++|.+||++..+...
T Consensus 25 ~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~------------------ 86 (517)
T COG0737 25 VKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLS------------------ 86 (517)
T ss_pred eeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccc------------------
Confidence 4799999999997643 1 1234555443 446899999999532110
Q ss_pred ccchhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCC---C---C---CCCCCcceEEEEeCcE
Q 014557 270 HETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K---E---SGSLSKFYYSFNAGGI 340 (422)
Q Consensus 270 ~e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~---~---~~~~~~~yysf~~g~v 340 (422)
.|........+.|..+ +. =..+.||||+.... ..+..+.....+|. | . .....+.|.-++.+++
T Consensus 87 --~~~~~g~~~~~~mN~m--~y-Da~tiGNHEFd~g~--~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~ 159 (517)
T COG0737 87 --DYLTKGEPTVDLLNAL--GY-DAMTLGNHEFDYGL--EALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGV 159 (517)
T ss_pred --ccccCCChHHHHHhhc--CC-cEEeecccccccCH--HHHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCe
Confidence 0101112223444444 22 24689999997432 22333333333331 0 1 1123356788889885
Q ss_pred E--EEEEeccc--cCC--------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHH
Q 014557 341 H--FLMLAAYV--SFD--------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYK 408 (422)
Q Consensus 341 ~--fi~Ldt~~--~~~--------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~ 408 (422)
+ +|++-+.. .+. .-....+++++.+.+.+++...-+|++.|.+........... ....... .
T Consensus 160 KIgiIG~~~~~~~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~-~---- 233 (517)
T COG0737 160 KIGIIGLTTPTIPTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVA-V---- 233 (517)
T ss_pred EEEEEEecCCcccccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-ccccccc-c----
Confidence 5 56555311 111 123556777777777655446679999999886542211110 0000000 0
Q ss_pred cCCcEEEEccccC
Q 014557 409 YGVDVVFNGHVSE 421 (422)
Q Consensus 409 ~~VdlvlsGH~H~ 421 (422)
.++|+++.||.|.
T Consensus 234 ~~iD~i~~GH~H~ 246 (517)
T COG0737 234 PGIDLIIGGHSHT 246 (517)
T ss_pred cCcceEeccCCcc
Confidence 4499999999994
No 78
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.89 E-value=0.00066 Score=65.15 Aligned_cols=169 Identities=15% Similarity=0.185 Sum_probs=90.7
Q ss_pred eEEEEEecCCCCCCh---HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh
Q 014557 209 SRIAIVGDVGLTYNT---TSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~---~~~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l 284 (422)
+||+++||.=..... ...+..+. +.++||++..||.+- .|... . + ...+.|
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~------gG~Gi------------~---~----~~~~~L 55 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTT------HGKGL------------T---L----KIYEFL 55 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccC------CCCCC------------C---H----HHHHHH
Confidence 489999998643222 22344444 357999999999983 22110 0 1 112222
Q ss_pred hhhhcCCcEEEecCCcccccccccccchh---cccccCCCCCCCCCCCcceEEEEeCcEEEEEEecc--ccCCC--CHhH
Q 014557 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVA---YTSRFAFPSKESGSLSKFYYSFNAGGIHFLMLAAY--VSFDK--SGDQ 357 (422)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~---y~~~f~~P~~~~~~~~~~yysf~~g~v~fi~Ldt~--~~~~~--~~~Q 357 (422)
.. ..+-++.+ |||++........... .....++|.. ..+..|..++.++..+-+++-. ....+ ...-
T Consensus 56 ~~--~GvDviT~-GNH~~Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~P 129 (266)
T TIGR00282 56 KQ--SGVNYITM-GNHTWFQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNP 129 (266)
T ss_pred Hh--cCCCEEEc-cchhccCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCH
Confidence 22 25566655 9999964321011111 1111223322 2234466678888776655532 11111 1122
Q ss_pred HHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 358 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.+-+++.+++.+. +++.+||.+|.-.- .. +.....+.+.+|++|+.-|+|.
T Consensus 130 f~~~d~~i~~lk~-~~d~IIVd~Haeat-----------sE-K~a~~~~ldg~vsaVvGtHtHV 180 (266)
T TIGR00282 130 FKVLKELINMLKK-DCDLIFVDFHAETT-----------SE-KNAFGMAFDGYVTAVVGTHTHV 180 (266)
T ss_pred HHHHHHHHHhhhc-CCCEEEEEeCCCCH-----------HH-HHHHHHHhCCCccEEEeCCCCC
Confidence 3335555555433 46789999995431 11 3334567777999999999996
No 79
>PRK09453 phosphodiesterase; Provisional
Probab=97.88 E-value=3.3e-05 Score=70.03 Aligned_cols=75 Identities=20% Similarity=0.346 Sum_probs=46.3
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (422)
+|++++||+|..... .++++.+.+.++|.++++||++.. |. ..+..+.|+ ..+..+.++.+
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~------~~----------~~~~~~~~~--~~~~~~~l~~~ 62 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYH------GP----------RNPLPEGYA--PKKVAELLNAY 62 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEccccccc------Cc----------CCCCccccC--HHHHHHHHHhc
Confidence 589999999965322 234455556789999999999842 11 001111221 12333334433
Q ss_pred hcCCcEEEecCCcccc
Q 014557 288 LSKVPIMVVEGNHEYE 303 (422)
Q Consensus 288 ~~~iP~~~v~GNHD~~ 303 (422)
..+++++.||||..
T Consensus 63 --~~~v~~V~GNhD~~ 76 (182)
T PRK09453 63 --ADKIIAVRGNCDSE 76 (182)
T ss_pred --CCceEEEccCCcch
Confidence 46899999999964
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.86 E-value=0.0003 Score=74.75 Aligned_cols=111 Identities=16% Similarity=0.228 Sum_probs=56.5
Q ss_pred EEecCCcccccccccccchhcccccCCCC---C---CCC----CCCcceEEEEeCc--EEEEEEecccc-C---CCC---
Q 014557 294 MVVEGNHEYEEQAENRTFVAYTSRFAFPS---K---ESG----SLSKFYYSFNAGG--IHFLMLAAYVS-F---DKS--- 354 (422)
Q Consensus 294 ~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~---~~~----~~~~~yysf~~g~--v~fi~Ldt~~~-~---~~~--- 354 (422)
+.++||||+... ...+..+.....+|- | ... ..-..|.-++.++ +-||+|.+... . ...
T Consensus 85 a~~lGNHEFd~G--~~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~ 162 (550)
T TIGR01530 85 FFTLGNHEFDAG--NEGLKEFLEPLEIPVLSANVIPDAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDI 162 (550)
T ss_pred EEEeccccccCC--HHHHHHHHHhCCCCEEEEeeecCCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCce
Confidence 568999998643 223333333222221 0 000 1123466678888 55677754211 0 111
Q ss_pred --HhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 355 --GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 355 --~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
....+=+++..++.++.+...+|++.|..... + .++.++. +||++|.||.|.
T Consensus 163 ~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~~~---------d------~~la~~~~~iD~IigGHsH~ 217 (550)
T TIGR01530 163 KFIDEIAAAQIAANALKQQGINKIILLSHAGFEK---------N------CEIAQKINDIDVIVSGDSHY 217 (550)
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEEecCCcHH---------H------HHHHhcCCCCCEEEeCCCCc
Confidence 11222233333333324567799999975321 0 1234443 899999999997
No 81
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.85 E-value=0.00017 Score=71.19 Aligned_cols=38 Identities=16% Similarity=0.080 Sum_probs=25.0
Q ss_pred eEEEEEecCCCCCCh-------HHHHHHHHhC----C-CCEEEEcCCccc
Q 014557 209 SRIAIVGDVGLTYNT-------TSTVSHMISN----R-PDLILLVGDVTY 246 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-------~~~~~~l~~~----~-pDfvl~~GDl~y 246 (422)
++|++.+|+|..... ...++++.+. . .-+++.+||+..
T Consensus 1 l~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~q 50 (313)
T cd08162 1 LQLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFI 50 (313)
T ss_pred CeEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCcccc
Confidence 478999999976321 2235555432 3 348899999984
No 82
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.85 E-value=0.0003 Score=74.86 Aligned_cols=184 Identities=19% Similarity=0.245 Sum_probs=90.2
Q ss_pred cCeEEEEEecCCCCCCh-----------HHHHHHHHhC----CC-CEEEEcCCcccccccccCCCCCCcccccCCCCCCc
Q 014557 207 YPSRIAIVGDVGLTYNT-----------TSTVSHMISN----RP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (422)
Q Consensus 207 ~~~rf~v~gD~~~~~~~-----------~~~~~~l~~~----~p-Dfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~ 270 (422)
..++|++.+|+|..... ...++++.+. ++ -+++.+||+.. |. +..
T Consensus 33 ~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~-------Gs------------~~s 93 (551)
T PRK09558 33 YKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINT-------GV------------PES 93 (551)
T ss_pred eEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCcccc-------ce------------Ehh
Confidence 36999999999976321 1234444421 33 57899999984 22 111
Q ss_pred cchhhHHHHHHHhhhhhhcCCcEEEecCCcccccccccccchhcccccCCCC---C----CCC-CCCcceEEEEeCcEE-
Q 014557 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPS---K----ESG-SLSKFYYSFNAGGIH- 341 (422)
Q Consensus 271 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~---~----~~~-~~~~~yysf~~g~v~- 341 (422)
..++ .....+.|..+ ..-+ .++||||+.... ..+..+.....+|. | ..+ ..-..|.-++.++++
T Consensus 94 ~~~~--g~~~i~~mN~~--g~Da-~tlGNHEFD~G~--~~L~~~~~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kI 166 (551)
T PRK09558 94 DLQD--AEPDFRGMNLI--GYDA-MAVGNHEFDNPL--SVLRKQEKWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKI 166 (551)
T ss_pred hhcC--CchhHHHHhcC--CCCE-EcccccccCcCH--HHHHHhhccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEE
Confidence 1111 11223444444 3334 456999987432 22222222222221 0 001 112346667888865
Q ss_pred -EEEEecccc--C-CC-------CHhHHHHHHHHHHhccc-CCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc
Q 014557 342 -FLMLAAYVS--F-DK-------SGDQYKWLEEDLANVER-EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY 409 (422)
Q Consensus 342 -fi~Ldt~~~--~-~~-------~~~Q~~WL~~~L~~~~~-~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~ 409 (422)
||++-+... + .+ -.+..+-+++..++.++ .+...+|++.|.......... .... .-.++.++.
T Consensus 167 giiG~~t~~~~~~~~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~----~d~~la~~~ 241 (551)
T PRK09558 167 AVIGLTTEDTAKIGNPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAP----GDVEMARSL 241 (551)
T ss_pred EEEEEeccccccccCCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCc----cHHHHHHhC
Confidence 455433211 0 00 01222334444444432 356779999998875321110 0000 002344443
Q ss_pred ---CCcEEEEccccC
Q 014557 410 ---GVDVVFNGHVSE 421 (422)
Q Consensus 410 ---~VdlvlsGH~H~ 421 (422)
+||+++.||.|.
T Consensus 242 ~~~~IDvIlgGHsH~ 256 (551)
T PRK09558 242 PAGGLDMIVGGHSQD 256 (551)
T ss_pred CccCceEEEeCCCCc
Confidence 799999999995
No 83
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.68 E-value=8.4e-05 Score=66.74 Aligned_cols=70 Identities=17% Similarity=0.405 Sum_probs=42.7
Q ss_pred EEEecCCCCCCh--------------HHHHHH----HHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccch
Q 014557 212 AIVGDVGLTYNT--------------TSTVSH----MISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (422)
Q Consensus 212 ~v~gD~~~~~~~--------------~~~~~~----l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y 273 (422)
++++|+|++... .++++. +.+.+||.++++||+++... +. .
T Consensus 1 l~isDlHlG~~~~~~~~g~~~p~~~~~~~~~~l~~~~~~~~~d~lii~GDl~~~~~----~~----------------~- 59 (172)
T cd07391 1 LVVADLHLGKEEELRRRGILLPRGQTEDTLERLDRLIEEYGPERLIILGDLKHSFG----GL----------------S- 59 (172)
T ss_pred CEeEeeccchHHHHHhcCCcCCcccHHHHHHHHHHHHHhcCCCEEEEeCccccccc----cc----------------C-
Confidence 368899887422 123333 33579999999999996311 10 0
Q ss_pred hhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
...+.... .+......+|+++++||||..
T Consensus 60 ~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 60 RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 11222221 233345678999999999975
No 84
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.59 E-value=0.00027 Score=62.06 Aligned_cols=47 Identities=13% Similarity=-0.123 Sum_probs=30.0
Q ss_pred EEEEeCCCcccCCccc--c---cchHHHHHHHHHHHHHcCCcEEEEccccCC
Q 014557 376 LVATWHAPWYSTYKAH--Y---REAECMRVAMEDLLYKYGVDVVFNGHVSES 422 (422)
Q Consensus 376 ~Iv~~H~P~y~~~~~~--~---~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 422 (422)
-|+++|.|++...... . .........+.+++++.+..++||||.|.|
T Consensus 71 DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~f 122 (150)
T cd07380 71 DILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEGVF 122 (150)
T ss_pred CEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCCce
Confidence 4777888876542110 0 001112356678889999999999999853
No 85
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.54 E-value=0.0024 Score=70.28 Aligned_cols=59 Identities=14% Similarity=0.069 Sum_probs=33.5
Q ss_pred HHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 358 YKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 358 ~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.+.+++...+.+..+...+|++.|..+.........++. . .++-+--+||+++.||.|.
T Consensus 295 veaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En~--~---~~LA~v~GIDaIvgGHsH~ 353 (814)
T PRK11907 295 VEAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEENV--G---YQIASLSGVDAVVTGHSHA 353 (814)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccch--h---hHHhcCCCCCEEEECCCCC
Confidence 344555554444446778999999886432111111111 1 1222223899999999996
No 86
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.47 E-value=0.0028 Score=73.23 Aligned_cols=56 Identities=23% Similarity=0.301 Sum_probs=33.9
Q ss_pred HHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 361 L~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
+++.+++.++.+...+|++.|............+ ....+|.++. +||+++.||.|.
T Consensus 223 ~~~~v~~lk~~gaDvII~l~H~G~~~~~~~~~~e-----n~~~~la~~~~gID~Il~GHsH~ 279 (1163)
T PRK09419 223 ANKTIPEMKKGGADVIVALAHSGIESEYQSSGAE-----DSVYDLAEKTKGIDAIVAGHQHG 279 (1163)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCcCCCCCCCCcc-----hHHHHHHHhCCCCcEEEeCCCcc
Confidence 3444444433467789999999875432211111 2233455454 899999999996
No 87
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.35 E-value=0.00055 Score=64.26 Aligned_cols=70 Identities=13% Similarity=0.358 Sum_probs=46.2
Q ss_pred eEEEEEecCCCCCCh--------------HHHHHHHH----hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCc
Q 014557 209 SRIAIVGDVGLTYNT--------------TSTVSHMI----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~--------------~~~~~~l~----~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~ 270 (422)
-+.++++|+|.+... .++++++. +.+||.++++||+.+... .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~-----~--------------- 74 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFK-----K--------------- 74 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccC-----C---------------
Confidence 467999999998422 13444443 468999999999995311 0
Q ss_pred cchhhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 271 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
...|..+.++++.+ ..+++.++||||..
T Consensus 75 ---~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 75 ---GLEWRFIREFIEVT--FRDLILIRGNHDAL 102 (225)
T ss_pred ---hHHHHHHHHHHHhc--CCcEEEECCCCCCc
Confidence 02334444555554 45999999999964
No 88
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.33 E-value=0.0046 Score=67.95 Aligned_cols=45 Identities=29% Similarity=0.191 Sum_probs=27.2
Q ss_pred CCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 371 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 371 ~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
.+...+|++.|........ .. .+..+- -.+.+. +||++|.||.|.
T Consensus 243 ~GaDvIIaLsH~G~~~d~~---~~--~~ena~-~~l~~v~gID~IlgGHsH~ 288 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGY---NV--GMENAS-YYLTEVPGVDAVLMGHSHT 288 (780)
T ss_pred cCCCEEEEEeccCcccccc---cc--cchhhh-HHHhcCCCCCEEEECCCCC
Confidence 4567799999987643211 11 010111 123454 899999999996
No 89
>PHA02239 putative protein phosphatase
Probab=97.32 E-value=0.00055 Score=64.73 Aligned_cols=70 Identities=19% Similarity=0.302 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHhC--CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhh
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMISN--RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQ 285 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~~~--~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~ 285 (422)
+|++++||+|..... .+.++.+... ..|.++++||+++ .|.. . . ......++
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iD------rG~~-------------s---~---~v~~~l~~ 55 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVD------RGKR-------------S---K---DVVNYIFD 55 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCC------CCCC-------------h---H---HHHHHHHH
Confidence 478999999965322 2344555332 2599999999995 2320 0 1 11122222
Q ss_pred hhhcCCcEEEecCCcccc
Q 014557 286 PVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 286 ~l~~~iP~~~v~GNHD~~ 303 (422)
.+....++++++||||..
T Consensus 56 ~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 56 LMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred HhhcCCCeEEEECCcHHH
Confidence 223346799999999964
No 90
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.29 E-value=0.00059 Score=64.78 Aligned_cols=82 Identities=18% Similarity=0.286 Sum_probs=48.2
Q ss_pred EEEecCCCCCCh--H----HHHHHHHhC-----CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHH
Q 014557 212 AIVGDVGLTYNT--T----STVSHMISN-----RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYW 280 (422)
Q Consensus 212 ~v~gD~~~~~~~--~----~~~~~l~~~-----~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~ 280 (422)
+++||+|++... . ..++.+... ++|.++++||++...... .+.. ..+ ..+.....+..+
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~-~~~~-~~~--------~~~~~~~~~~~~ 71 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVY-PGQE-EEL--------EILDIYEQYEEA 71 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccC-Ccch-hhh--------hhhhHHHHHHHH
Confidence 689999986432 1 223333333 569999999999531000 0000 000 000112234556
Q ss_pred HHhhhhhhcCCcEEEecCCcccc
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
.++++.+...+|+++++||||..
T Consensus 72 ~~~l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 72 AEYLSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHHHHhcccCCeEEEeCCCCCcc
Confidence 67778887789999999999985
No 91
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.17 E-value=0.00053 Score=66.30 Aligned_cols=67 Identities=21% Similarity=0.306 Sum_probs=42.6
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhh
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQP 286 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~ 286 (422)
++++++||+|..... ..+++++. +.+.|.++++||++. .|.. -.+..+++..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVd------rGp~--------------------s~~vl~~l~~ 54 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVN------RGPD--------------------SLEVLRFVKS 54 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccC------CCcC--------------------HHHHHHHHHh
Confidence 378999999976433 22344442 246899999999994 2321 0123334433
Q ss_pred hhcCCcEEEecCCcccc
Q 014557 287 VLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 287 l~~~iP~~~v~GNHD~~ 303 (422)
+ ..++.+|.||||..
T Consensus 55 l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 55 L--GDSAVTVLGNHDLH 69 (275)
T ss_pred c--CCCeEEEecChhHH
Confidence 3 34688999999974
No 92
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.15 E-value=0.0086 Score=64.66 Aligned_cols=45 Identities=24% Similarity=0.161 Sum_probs=27.5
Q ss_pred CCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 371 EVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 371 ~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
++...+|++.|............+ . ....+.+. +||+++.||.|.
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~~~e--n----~~~~l~~v~gID~Il~GHsH~ 239 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQPGAE--N----SAYYLTKVPGIDAVLFGHSHA 239 (626)
T ss_pred cCCCEEEEEeccCcCCCccccccc--h----HHHHHhcCCCCCEEEcCCCCc
Confidence 456779999998765321111111 1 11224454 899999999996
No 93
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=97.13 E-value=0.013 Score=59.91 Aligned_cols=89 Identities=16% Similarity=0.326 Sum_probs=54.5
Q ss_pred cCeEEEEEecCCCCCCh------HHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh
Q 014557 207 YPSRIAIVGDVGLTYNT------TSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (422)
Q Consensus 207 ~~~rf~v~gD~~~~~~~------~~~~~~l~-----~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~ 275 (422)
..+++++++|.|.+... ...++.+. ..+..+++.+||+++.-+.. -|+. .+--+.+-| .
T Consensus 224 e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiY-pgq~--------~eL~i~di~-~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIY-PGQE--------EELVIADIY-E 293 (481)
T ss_pred cceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccc-cCcc--------cccccccch-H
Confidence 46899999999986432 12333333 12457999999999521111 1111 111111122 2
Q ss_pred HHHHHHHhhhhhhcCCcEEEecCCcccccc
Q 014557 276 RWDYWGRYMQPVLSKVPIMVVEGNHEYEEQ 305 (422)
Q Consensus 276 ~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~ 305 (422)
+++.+.+++..+-..+-+++.|||||....
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~r~ 323 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAVRQ 323 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcccc
Confidence 455667778777778999999999998644
No 94
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.13 E-value=0.00086 Score=63.31 Aligned_cols=68 Identities=21% Similarity=0.293 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh--C--------CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHH
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMIS--N--------RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWD 278 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~~--~--------~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd 278 (422)
||+++||+|..... .+.++++.- . +.|.++++||+++. |. .-.
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr------G~--------------------~s~ 55 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR------GP--------------------DSP 55 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC------CC--------------------CHH
Confidence 79999999976433 223444310 1 35899999999942 22 112
Q ss_pred HHHHhhhhhhcCCcEEEecCCcccc
Q 014557 279 YWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 279 ~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
+..+++..+...-.+.++.||||..
T Consensus 56 evl~~l~~l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 56 EVLRLVMSMVAAGAALCVPGNHDNK 80 (234)
T ss_pred HHHHHHHHHhhCCcEEEEECCcHHH
Confidence 2334444443334688999999963
No 95
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.08 E-value=0.0079 Score=52.31 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=40.6
Q ss_pred EEEEEecCCCCCC----------hH----HHHHHHHh-CCC-CEEEEcCCcccccccccCCCCCCcccccCCCCCCccch
Q 014557 210 RIAIVGDVGLTYN----------TT----STVSHMIS-NRP-DLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETY 273 (422)
Q Consensus 210 rf~v~gD~~~~~~----------~~----~~~~~l~~-~~p-Dfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y 273 (422)
.+.++||+|.+.. .. ..+....+ .+| |.+.|+||++.. .
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~-------~------------------ 59 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSG-------A------------------ 59 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccc-------c------------------
Confidence 5678999997632 11 12333332 245 799999999942 1
Q ss_pred hhHHHHHHHhhhhhhcCCcEEEecCCcccc
Q 014557 274 QPRWDYWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 274 ~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
.+-..+.+.++.|... ...|+||||-.
T Consensus 60 -n~~~~a~~IlerLnGr--khlv~GNhDk~ 86 (186)
T COG4186 60 -NRERAAGLILERLNGR--KHLVPGNHDKC 86 (186)
T ss_pred -chhhHHHHHHHHcCCc--EEEeeCCCCCC
Confidence 1113455667777443 48899999964
No 96
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.96 E-value=0.016 Score=62.86 Aligned_cols=57 Identities=16% Similarity=0.166 Sum_probs=32.5
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcEEEEccccC
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDVVFNGHVSE 421 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ 421 (422)
+-+++...+.+.++...+|++.|............+. .. ..+.+. +||+++.||.|.
T Consensus 205 e~a~~~v~~Lk~~gaDvII~LsH~G~~~d~~~~~aen-----~~-~~l~~v~gID~Il~GHsH~ 262 (649)
T PRK09420 205 ETARKYVPEMKEKGADIVVAIPHSGISADPYKAMAEN-----SV-YYLSEVPGIDAIMFGHSHA 262 (649)
T ss_pred HHHHHHHHHHHHcCCCEEEEEecCCcCCCCccccccc-----hh-HHHhcCCCCCEEEeCCCCc
Confidence 3344444444334577899999987643211111111 11 123444 899999999996
No 97
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.88 E-value=0.0015 Score=60.40 Aligned_cols=37 Identities=24% Similarity=0.308 Sum_probs=24.8
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~~-~~pDfvl~~GDl~y 246 (422)
||+++||+|..... .+.++.+.. .++|.++++||+++
T Consensus 2 ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~ 40 (207)
T cd07424 2 RDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLID 40 (207)
T ss_pred CEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCccc
Confidence 78999999965322 112232221 36899999999995
No 98
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.78 E-value=0.0035 Score=59.70 Aligned_cols=69 Identities=20% Similarity=0.245 Sum_probs=40.0
Q ss_pred eEEEEEecCCCCCCh-HHHHHHHHh---------CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHH
Q 014557 209 SRIAIVGDVGLTYNT-TSTVSHMIS---------NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWD 278 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~-~~~~~~l~~---------~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd 278 (422)
+|++++||+|..... .++++++.- ..-|.++++||+++ .|.. . .
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD------RGp~---------------S-----~ 54 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD------RGPH---------------S-----L 54 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC------CCcC---------------h-----H
Confidence 378999999976332 223333211 12378999999995 2321 0 1
Q ss_pred HHHHhhhhhhcCCcEEEecCCcccc
Q 014557 279 YWGRYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 279 ~~~~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
+..+.+..+...-.++++.||||..
T Consensus 55 ~vl~~~~~~~~~~~~~~l~GNHE~~ 79 (245)
T PRK13625 55 RMIEIVWELVEKKAAYYVPGNHCNK 79 (245)
T ss_pred HHHHHHHHHhhCCCEEEEeCccHHH
Confidence 1223333332344789999999953
No 99
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.71 E-value=0.021 Score=54.65 Aligned_cols=146 Identities=16% Similarity=0.251 Sum_probs=76.7
Q ss_pred EEEEecCCCCCChH--H----HHHHHHh-----------CCCCEEEEcCCcccccccccCCCCCCcccc--cCCCCCCcc
Q 014557 211 IAIVGDVGLTYNTT--S----TVSHMIS-----------NRPDLILLVGDVTYANLYLTNGTGSDCYAC--SFANSPIHE 271 (422)
Q Consensus 211 f~v~gD~~~~~~~~--~----~~~~l~~-----------~~pDfvl~~GDl~yad~~~~~g~~~~~y~~--~~~~~~~~e 271 (422)
++++||+|.+.+.. . .++.|.. .+...+|++||.+.... ...+-... ........+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~-----~~~~~~~~~~~~~~~~~~~ 76 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKST-----QGKDSQTKARYLTKKSSAA 76 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccc-----cccchhhhhhccccccchh
Confidence 78899999875532 1 2233321 23457999999995321 10000000 000000011
Q ss_pred chhhHHHHHHHhhhhhhcCCcEEEecCCccccccccc-ccchhcccccCCCCCC----CCCCCcceEEEEeCcEEEEEEe
Q 014557 272 TYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEEQAEN-RTFVAYTSRFAFPSKE----SGSLSKFYYSFNAGGIHFLMLA 346 (422)
Q Consensus 272 ~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~~~~~-~~~~~y~~~f~~P~~~----~~~~~~~yysf~~g~v~fi~Ld 346 (422)
.+ ...+.+..++..+...+|+...|||||-....-. ..+.. ..| |... -....|- |.|+++|++|++..
T Consensus 77 ~~-~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~lPQqplh~--~lf--p~s~~~~~~~~vtNP-~~~~i~g~~vLgts 150 (257)
T cd07387 77 SV-EAVKELDNFLSQLASSVPVDLMPGEFDPANHSLPQQPLHR--CLF--PKSSNYSTLNLVTNP-YEFSIDGVRVLGTS 150 (257)
T ss_pred hH-HHHHHHHHHHHhhhcCCeEEECCCCCCcccccCCCCCCCH--HHh--hcccccCCcEEeCCC-eEEEECCEEEEEEC
Confidence 12 2355666778888889999999999997643211 11100 011 1100 0111222 45999999999988
Q ss_pred ccc-----cCCCCHhHHHHHHHHHHh
Q 014557 347 AYV-----SFDKSGDQYKWLEEDLAN 367 (422)
Q Consensus 347 t~~-----~~~~~~~Q~~WL~~~L~~ 367 (422)
+.. .|.....-.+.|++.|+-
T Consensus 151 Gqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 151 GQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred CCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 752 133344446667777654
No 100
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.62 E-value=0.0024 Score=59.63 Aligned_cols=37 Identities=27% Similarity=0.425 Sum_probs=26.7
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC-CCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMISN-RPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~~~-~pDfvl~~GDl~y 246 (422)
|++++||.|..... .++++++... +.|-++++||++.
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvD 56 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLID 56 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccC
Confidence 89999999976433 2344444322 5789999999994
No 101
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.60 E-value=0.0027 Score=59.35 Aligned_cols=37 Identities=30% Similarity=0.451 Sum_probs=26.2
Q ss_pred EEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMI-SNRPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~-~~~pDfvl~~GDl~y 246 (422)
|++++||+|..... .++++.+. ..+.|.++++||+++
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vd 54 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNID 54 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcC
Confidence 99999999976332 22333332 246899999999995
No 102
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.44 E-value=0.012 Score=45.09 Aligned_cols=76 Identities=25% Similarity=0.332 Sum_probs=46.1
Q ss_pred CCceEEEEecCCCCcEEEEEEcCCCcCcCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeE
Q 014557 85 EPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGII 164 (422)
Q Consensus 85 ~P~qi~lt~~~~~~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~ 164 (422)
+|+++++.-- ..+++.|+|...... +. ....-.|+|....+.... .... . ++-.
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~-~~-------~~~~y~v~~~~~~~~~~~----~~~~----~---------~~~~ 55 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSG-NG-------PITGYRVEYRSVNSTSDW----QEVT----V---------PGNE 55 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSST-SS-------SESEEEEEEEETTSSSEE----EEEE----E---------ETTS
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCC-CC-------CeeEEEEEEEecccceee----eeee----e---------eeee
Confidence 4788877765 378999999987511 11 112345666555443300 0000 0 1112
Q ss_pred EEEEeCCCCCCCEEEEEeecCC
Q 014557 165 HHVRLTGLKPDTLYHYQCGDPS 186 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~~~ 186 (422)
..++|+||+|+|+|.+||..-+
T Consensus 56 ~~~~i~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 56 TSYTITGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp SEEEEESCCTTSEEEEEEEEEE
T ss_pred eeeeeccCCCCCEEEEEEEEEe
Confidence 4788999999999999987544
No 103
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.42 E-value=0.0039 Score=58.42 Aligned_cols=67 Identities=15% Similarity=0.248 Sum_probs=39.4
Q ss_pred EEEEecCCCCCCh-HHHHHHHHhC--------CCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHH
Q 014557 211 IAIVGDVGLTYNT-TSTVSHMISN--------RPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWG 281 (422)
Q Consensus 211 f~v~gD~~~~~~~-~~~~~~l~~~--------~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~ 281 (422)
+.++||.|..... ...++++... ..|.++++||+++. |.. =.+..
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR------Gp~--------------------S~~vl 54 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR------GPE--------------------IRELL 54 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC------CCC--------------------HHHHH
Confidence 3689999976432 2234443211 35899999999942 321 01223
Q ss_pred HhhhhhhcCCcEEEecCCcccc
Q 014557 282 RYMQPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 282 ~~l~~l~~~iP~~~v~GNHD~~ 303 (422)
+.+..+...-.++++.||||..
T Consensus 55 ~~l~~l~~~~~~~~l~GNHE~~ 76 (222)
T cd07413 55 EIVKSMVDAGHALAVMGNHEFN 76 (222)
T ss_pred HHHHHhhcCCCEEEEEccCcHH
Confidence 3333333333688999999964
No 104
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=96.38 E-value=0.049 Score=51.46 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=66.9
Q ss_pred HHhhhhhhcCCcEEEecCCcccccccccccchhc---ccccCCCCCCCCCC---CcceEEEEeCcE--EEEEEeccccCC
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAY---TSRFAFPSKESGSL---SKFYYSFNAGGI--HFLMLAAYVSFD 352 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y---~~~f~~P~~~~~~~---~~~yysf~~g~v--~fi~Ldt~~~~~ 352 (422)
.+.|..+ .+-++.+.+||++..... .+..- .+.-.++..+.+.. ...+..++.+++ -|+.+-+.....
T Consensus 70 ~~~L~~~--G~d~~tlaNNH~fD~G~~--gl~~t~~~l~~~~i~~~g~~~~~~~~~~~~i~~~~g~kVg~ig~t~~~~~~ 145 (239)
T cd07381 70 ADALKAA--GFDVVSLANNHTLDYGEE--GLLDTLDALDEAGIAHAGAGRNLEEARRPAILEVNGIKVAFLAYTYGTNGI 145 (239)
T ss_pred HHHHHHh--CCCEEEcccccccccchH--HHHHHHHHHHHcCCceeECCCCHHHhcCcEEEEECCEEEEEEEEECCCCCC
Confidence 3444443 566666666999864322 22111 11122332221111 134556778884 455554432110
Q ss_pred ----------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 353 ----------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 353 ----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
......+-+++.+++.++ +..++||+.|-...... ........+...+.+.++|+|+.||.|.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~~~~la~~l~~~G~D~IiG~H~Hv 218 (239)
T cd07381 146 PLAAGARPGGVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPEQRELARALIDAGADLVIGHHPHV 218 (239)
T ss_pred cCcccCCccccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHHHHHHHHHHHHCCCCEEEcCCCCc
Confidence 011113446666666543 37789999996542211 1112233455555567999999999996
No 105
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.38 E-value=0.0045 Score=59.26 Aligned_cols=64 Identities=22% Similarity=0.280 Sum_probs=40.2
Q ss_pred EEEecCCCCCCh-HHHHHHHHh-CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhc
Q 014557 212 AIVGDVGLTYNT-TSTVSHMIS-NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLS 289 (422)
Q Consensus 212 ~v~gD~~~~~~~-~~~~~~l~~-~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~ 289 (422)
.++||+|..... .+.++++.. .+.|.++++||++. .|.. -.+..+++..+.
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVd------RGp~--------------------s~evl~~l~~l~- 54 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVN------RGPD--------------------SLETLRFVKSLG- 54 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCC------CCcC--------------------HHHHHHHHHhcC-
Confidence 689999976433 234444432 35799999999994 2321 112334444442
Q ss_pred CCcEEEecCCcccc
Q 014557 290 KVPIMVVEGNHEYE 303 (422)
Q Consensus 290 ~iP~~~v~GNHD~~ 303 (422)
..+..|.||||..
T Consensus 55 -~~v~~VlGNHD~~ 67 (257)
T cd07422 55 -DSAKTVLGNHDLH 67 (257)
T ss_pred -CCeEEEcCCchHH
Confidence 4678999999974
No 106
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.29 E-value=0.0065 Score=57.72 Aligned_cols=137 Identities=21% Similarity=0.338 Sum_probs=84.0
Q ss_pred hhhhhcCCcEEEecCCccccccccc-------ccchhcccc-------cCCCCC-CCCCCCcceEEEEeCcEEEEEEecc
Q 014557 284 MQPVLSKVPIMVVEGNHEYEEQAEN-------RTFVAYTSR-------FAFPSK-ESGSLSKFYYSFNAGGIHFLMLAAY 348 (422)
Q Consensus 284 l~~l~~~iP~~~v~GNHD~~~~~~~-------~~~~~y~~~-------f~~P~~-~~~~~~~~yysf~~g~v~fi~Ldt~ 348 (422)
..++...+|+++-.||||...+.-. +..+.|.+. |..|.. ..-.....-||+++|++|.+-+...
T Consensus 164 vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf 243 (392)
T COG5555 164 VGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRF 243 (392)
T ss_pred CCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCcCcccCCCCCcccccccchheeccccceeEEEEeee
Confidence 3445567999999999998754321 122223221 111111 1123345678999999998887664
Q ss_pred ccCC-C-CHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCccccc----------------chHHHHHHHHHHHHHcC
Q 014557 349 VSFD-K-SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYR----------------EAECMRVAMEDLLYKYG 410 (422)
Q Consensus 349 ~~~~-~-~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~----------------~~~~~r~~l~~ll~~~~ 410 (422)
..-. + ...-+-||+.+|........| ++++.|.-+-.-..+.+. .....|.++...++.|+
T Consensus 244 ~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfsteawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYN 322 (392)
T COG5555 244 IGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFSTEAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYN 322 (392)
T ss_pred ccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceeccccCchhcccccCCCCCCCCCCCCCcchHHHhhcCce
Confidence 3211 1 123467999999876544444 788888765321111110 01234678889999999
Q ss_pred CcEEEEccccC
Q 014557 411 VDVVFNGHVSE 421 (422)
Q Consensus 411 VdlvlsGH~H~ 421 (422)
|...|.||.|.
T Consensus 323 vvg~fhGhkhd 333 (392)
T COG5555 323 VVGTFHGHKHD 333 (392)
T ss_pred eEEeccccccc
Confidence 99999999995
No 107
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.27 E-value=0.012 Score=55.15 Aligned_cols=74 Identities=16% Similarity=0.396 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCh--------------HH---HHHHH-HhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCc
Q 014557 209 SRIAIVGDVGLTYNT--------------TS---TVSHM-ISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIH 270 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~--------------~~---~~~~l-~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~ 270 (422)
-+.++++|+|.+... .. .++++ .+.+|+-+|.+||+-.+- +.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~-----~~--------------- 79 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEF-----GK--------------- 79 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCcccccc-----Cc---------------
Confidence 478999999998542 11 23322 357999999999998531 11
Q ss_pred cchhhHHHHHHHhhhhhhcCCcEEEecCCccccc
Q 014557 271 ETYQPRWDYWGRYMQPVLSKVPIMVVEGNHEYEE 304 (422)
Q Consensus 271 e~y~~~wd~~~~~l~~l~~~iP~~~v~GNHD~~~ 304 (422)
..+.+|+....+++.+..+ -++++.||||-+.
T Consensus 80 -~~~~e~~~~~~f~~~~~~~-evi~i~GNHD~~i 111 (235)
T COG1407 80 -SLRQEKEEVREFLELLDER-EVIIIRGNHDNGI 111 (235)
T ss_pred -cccccHHHHHHHHHHhccC-cEEEEeccCCCcc
Confidence 1124566656666655433 4999999999763
No 108
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.23 E-value=0.0082 Score=58.21 Aligned_cols=37 Identities=19% Similarity=0.264 Sum_probs=25.4
Q ss_pred EEEEEecCCCCCCh-HHHHHHHHhC------CCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMISN------RPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~~~------~pDfvl~~GDl~y 246 (422)
++.++||.|..... ..+++.+.+. ..+.+|++||+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVD 46 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCD 46 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCC
Confidence 78999999976433 2334444321 3568999999995
No 109
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.21 E-value=0.0058 Score=56.85 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=39.2
Q ss_pred EEEecCCCCCCh-HHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhhhc-
Q 014557 212 AIVGDVGLTYNT-TSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPVLS- 289 (422)
Q Consensus 212 ~v~gD~~~~~~~-~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l~~- 289 (422)
.++||+|..... .+.++.+.....|.++++||++.. |.. ..+..+.+..+..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdr------g~~--------------------~~~~l~~l~~~~~~ 54 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDR------GPD--------------------SVEVIDLLLALKIL 54 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCC------CCC--------------------cHHHHHHHHHhcCC
Confidence 378999965322 223333333578999999999952 220 0122222222211
Q ss_pred CCcEEEecCCcccc
Q 014557 290 KVPIMVVEGNHEYE 303 (422)
Q Consensus 290 ~iP~~~v~GNHD~~ 303 (422)
..+++.+.||||..
T Consensus 55 ~~~~~~l~GNHe~~ 68 (225)
T cd00144 55 PDNVILLRGNHEDM 68 (225)
T ss_pred CCcEEEEccCchhh
Confidence 45799999999975
No 110
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=96.06 E-value=0.0084 Score=57.84 Aligned_cols=37 Identities=19% Similarity=0.355 Sum_probs=26.4
Q ss_pred EEEEEecCCCCCCh-HHHHHHHH-hCCCCEEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNT-TSTVSHMI-SNRPDLILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~-~~~~~~l~-~~~pDfvl~~GDl~y 246 (422)
++.++||+|..... ...++++. ....|-++++||++.
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVd 40 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVA 40 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccC
Confidence 57899999986443 33455554 235689999999994
No 111
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=96.02 E-value=0.11 Score=49.14 Aligned_cols=131 Identities=13% Similarity=0.142 Sum_probs=64.9
Q ss_pred HHhhhhhhcCCcEEEecCCcccccccccccchhcc---cccCCCCCCCCCC---CcceEEEEeCcEEE--EEEecccc--
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYEEQAENRTFVAYT---SRFAFPSKESGSL---SKFYYSFNAGGIHF--LMLAAYVS-- 350 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~---~~f~~P~~~~~~~---~~~yysf~~g~v~f--i~Ldt~~~-- 350 (422)
.+.|..+ .+-++.+.+|||+..... .+.... +...++..+.+.. ...+.-++.+++++ +++-+...
T Consensus 66 ~~~l~~~--G~d~~~laNNH~fD~G~~--gl~~t~~~l~~a~i~~~g~~~~~~~~~~~~i~~~~g~kIg~ig~t~~~~~~ 141 (239)
T smart00854 66 AAALKAA--GFDVVSLANNHSLDYGEE--GLLDTLAALDAAGIAHVGAGRNLAEARKPAIVEVKGIKIALLAYTYGTNNG 141 (239)
T ss_pred HHHHHHh--CCCEEEeccCcccccchH--HHHHHHHHHHHCCCCEeeCCCChHHhhCcEEEEECCEEEEEEEEEcCCCCC
Confidence 3444444 555666666999974322 121111 1122332221111 13455677888654 44432211
Q ss_pred CC-----C-----CHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEcccc
Q 014557 351 FD-----K-----SGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVS 420 (422)
Q Consensus 351 ~~-----~-----~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 420 (422)
+. . .....+=+++.+++++. +..++||+.|-....... . . ...+.+..-+.+.++|+|+.||.|
T Consensus 142 ~~~~~~~~g~~~~~~~~~~~i~~~i~~lr~-~~D~vIv~~H~G~e~~~~---p-~-~~~~~~A~~l~~~G~DvIiG~H~H 215 (239)
T smart00854 142 WAASKDRPGVALLPDLDREKILADIARARK-KADVVIVSLHWGVEYQYE---P-T-DEQRELAHALIDAGADVVIGHHPH 215 (239)
T ss_pred cccCCCCCCeeecCcCCHHHHHHHHHHHhc-cCCEEEEEecCccccCCC---C-C-HHHHHHHHHHHHcCCCEEEcCCCC
Confidence 10 0 00112334555555543 578899999976532211 1 1 112344445555799999999999
Q ss_pred C
Q 014557 421 E 421 (422)
Q Consensus 421 ~ 421 (422)
.
T Consensus 216 ~ 216 (239)
T smart00854 216 V 216 (239)
T ss_pred c
Confidence 6
No 112
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=94.83 E-value=0.64 Score=44.09 Aligned_cols=165 Identities=16% Similarity=0.250 Sum_probs=77.8
Q ss_pred EEEecCCCCCChHH---HHHHHH-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh
Q 014557 212 AIVGDVGLTYNTTS---TVSHMI-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (422)
Q Consensus 212 ~v~gD~~~~~~~~~---~~~~l~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (422)
+++||.=....... .+..+. +.++||||..|..+- +|.+. . +. .+.+++
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa------~G~Gi-----------t----~~---~~~~L~--- 53 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAA------GGFGI-----------T----PK---IAEELF--- 53 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTT------TTSS-----------------HH---HHHHHH---
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccC------CCCCC-----------C----HH---HHHHHH---
Confidence 35777643322222 233443 358999999999982 34321 0 11 122222
Q ss_pred hcCCcEEEecCCcccccccccccchhcc---cccCCCCCCC-CCCCcceEEEEeCcEEEEEEec--cccCCCCHhHHHHH
Q 014557 288 LSKVPIMVVEGNHEYEEQAENRTFVAYT---SRFAFPSKES-GSLSKFYYSFNAGGIHFLMLAA--YVSFDKSGDQYKWL 361 (422)
Q Consensus 288 ~~~iP~~~v~GNHD~~~~~~~~~~~~y~---~~f~~P~~~~-~~~~~~yysf~~g~v~fi~Ldt--~~~~~~~~~Q~~WL 361 (422)
...+-+ .+.|||=+... ....|. .+.--|.|-+ +..+.-|..++.++..+-++|- .........=...+
T Consensus 54 ~~GvDv-iT~GNH~wdkk----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~ 128 (253)
T PF13277_consen 54 KAGVDV-ITMGNHIWDKK----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAA 128 (253)
T ss_dssp HHT-SE-EE--TTTTSST----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHH
T ss_pred hcCCCE-EecCcccccCc----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHH
Confidence 224444 47999987532 111221 1222333322 3446778889999877776664 32222222334555
Q ss_pred HHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 362 EEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 362 ~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
++.|++. +.+++.+||=+|.=. .....+| -.+.+-+|.+|+-=|+|.
T Consensus 129 d~~l~~l-~~~~~~iiVDFHAEa-----------TSEK~A~-g~~lDGrvsaV~GTHTHV 175 (253)
T PF13277_consen 129 DRLLEEL-KEETDIIIVDFHAEA-----------TSEKQAM-GWYLDGRVSAVVGTHTHV 175 (253)
T ss_dssp HHHHHH------SEEEEEEE-S------------HHHHHHH-HHHHBTTBSEEEEESSSS
T ss_pred HHHHHhc-cccCCEEEEEeecCc-----------HHHHHHH-HHHhCCcEEEEEeCCCCc
Confidence 6666665 346778999989422 1112222 355566899999999996
No 113
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=94.76 E-value=0.4 Score=45.59 Aligned_cols=125 Identities=12% Similarity=0.141 Sum_probs=69.1
Q ss_pred CCcEEEecCCccccccccc--ccchhcccccCCCCCCCCC---CCcceEEEEeCcEEEEEEeccccC-----C-------
Q 014557 290 KVPIMVVEGNHEYEEQAEN--RTFVAYTSRFAFPSKESGS---LSKFYYSFNAGGIHFLMLAAYVSF-----D------- 352 (422)
Q Consensus 290 ~iP~~~v~GNHD~~~~~~~--~~~~~y~~~f~~P~~~~~~---~~~~yysf~~g~v~fi~Ldt~~~~-----~------- 352 (422)
.+-++.+.-||.+.....+ +... ..+...+...+.+. .......++.+++++-++...... .
T Consensus 75 G~d~vslANNH~~D~G~~gl~~Tl~-~L~~~gi~~~Gag~~~~~a~~p~i~~~~g~kia~l~~t~~~~~~~~~~~~~~~~ 153 (250)
T PF09587_consen 75 GFDVVSLANNHIFDYGEEGLLDTLE-ALDKAGIPYVGAGRNLEEARRPAIIEVNGVKIAFLGYTDGENGYSSANGNRPYG 153 (250)
T ss_pred CCCEEEecCCCCccccHHHHHHHHH-HHHHCCCcEeECcCChHHhcCeEEEEECCEEEEEEEEEcCCCCCcccccccccc
Confidence 5677778889987533211 1111 11222232222111 122345577788666555432110 0
Q ss_pred -----------CCHhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 353 -----------KSGDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 353 -----------~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
....+.+.+++++++++ ++..++||+.|--.-... ......+++...+.+.|+|+|+.+|.|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~-----~p~~~q~~~a~~lidaGaDiIiG~HpHv 227 (250)
T PF09587_consen 154 FSYRPDKAGLNPNRPGIERIKEDIREAR-KKADVVIVSLHWGIEYEN-----YPTPEQRELARALIDAGADIIIGHHPHV 227 (250)
T ss_pred ccccccccccccccchHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC-----CCCHHHHHHHHHHHHcCCCEEEeCCCCc
Confidence 01234578888888876 567899999997432111 1112234455566668999999999996
No 114
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=94.75 E-value=0.12 Score=53.42 Aligned_cols=42 Identities=33% Similarity=0.428 Sum_probs=32.8
Q ss_pred CeEEEEEecCCCCCCh---------HHHHHHHH----hCCCCEEEEcCCcccccc
Q 014557 208 PSRIAIVGDVGLTYNT---------TSTVSHMI----SNRPDLILLVGDVTYANL 249 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~---------~~~~~~l~----~~~pDfvl~~GDl~yad~ 249 (422)
.+||++.+|.|+++.. ..+++.|. +++.||||.+|||...+.
T Consensus 13 tirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 13 TIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 6999999999998643 33455543 579999999999998653
No 115
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=94.63 E-value=1.3 Score=41.73 Aligned_cols=171 Identities=18% Similarity=0.263 Sum_probs=90.5
Q ss_pred eEEEEEecCCCCCChHHHHHHH---H-hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhh
Q 014557 209 SRIAIVGDVGLTYNTTSTVSHM---I-SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYM 284 (422)
Q Consensus 209 ~rf~v~gD~~~~~~~~~~~~~l---~-~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l 284 (422)
+|++++||+=.......+-+++ . +.++||||..|-.+- +|.+. .|+.+..++
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa------~G~Gi------------------t~k~y~~l~ 56 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAA------GGFGI------------------TEKIYKELL 56 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCcccc------CCcCC------------------CHHHHHHHH
Confidence 5899999996654444433333 3 358999999999882 34321 233333333
Q ss_pred hhhhcCCcEEEecCCcccccccccccchhcccccCCCCCCC-CCCCcceEEEEeCcEEEEEEe--ccccCCC-CHhHHHH
Q 014557 285 QPVLSKVPIMVVEGNHEYEEQAENRTFVAYTSRFAFPSKES-GSLSKFYYSFNAGGIHFLMLA--AYVSFDK-SGDQYKW 360 (422)
Q Consensus 285 ~~l~~~iP~~~v~GNHD~~~~~~~~~~~~y~~~f~~P~~~~-~~~~~~yysf~~g~v~fi~Ld--t~~~~~~-~~~Q~~W 360 (422)
+. .+- ..+.|||=+..... ..|..-..++--|.+-+ +..+..|+-|...+..+.++| ....... -..-.+=
T Consensus 57 ~~---G~d-viT~GNH~wd~~ei-~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~ 131 (266)
T COG1692 57 EA---GAD-VITLGNHTWDQKEI-LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKA 131 (266)
T ss_pred Hh---CCC-EEecccccccchHH-HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHH
Confidence 22 344 45799998753211 01111111222233211 233456667777776555555 3222211 1222344
Q ss_pred HHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 361 LEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 361 L~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
+++.|.+.+ .+++.+||-+|.=--+. . .+| -++-+.+|.+|+-=|+|.
T Consensus 132 ~d~l~~~~~-~~~~~iiVDFHAEtTSE-------K----~a~-g~yldGrvsavvGTHTHV 179 (266)
T COG1692 132 ADKLLDEIK-LGTDLIIVDFHAETTSE-------K----NAF-GWYLDGRVSAVVGTHTHV 179 (266)
T ss_pred HHHHHHhCc-cCCceEEEEccccchhh-------h----hhh-heEEcCeEEEEEeccCcc
Confidence 666666654 35577999999643221 1 111 123344788999999996
No 116
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.82 E-value=0.088 Score=51.75 Aligned_cols=21 Identities=19% Similarity=0.195 Sum_probs=18.8
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.++..+.|++.+.++++=||.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He 242 (305)
T cd07416 222 YRAVCEFLQKNNLLSIIRAHE 242 (305)
T ss_pred HHHHHHHHHHcCCeEEEEecc
Confidence 467889999999999999996
No 117
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=93.11 E-value=0.19 Score=49.67 Aligned_cols=21 Identities=19% Similarity=0.316 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.++..+.+++.+.++++=||.
T Consensus 253 ~~~~~~Fl~~n~l~~IIR~He 273 (321)
T cd07420 253 PDVTSKVLQKHGLSLLIRSHE 273 (321)
T ss_pred HHHHHHHHHHCCCcEEEEcCh
Confidence 578889999999999999996
No 118
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=93.06 E-value=0.21 Score=48.24 Aligned_cols=21 Identities=19% Similarity=0.401 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.+++.++++++-||.
T Consensus 200 ~~~~~~Fl~~n~l~~iiR~He 220 (271)
T smart00156 200 PDAVDEFLKKNNLKLIIRAHQ 220 (271)
T ss_pred HHHHHHHHHHCCCeEEEecCc
Confidence 578889999999999999996
No 119
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=92.97 E-value=0.73 Score=48.43 Aligned_cols=56 Identities=16% Similarity=0.217 Sum_probs=37.3
Q ss_pred HhHHHHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHc-CCcE-EEEccccC
Q 014557 355 GDQYKWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKY-GVDV-VFNGHVSE 421 (422)
Q Consensus 355 ~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdl-vlsGH~H~ 421 (422)
-.|.+|-.+.++. ....-+|++.|.|.-.. .+ ....+.++...+ ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~~~~-----~e---~~~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPVRDD-----DE---WKSLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEecccccccc-----hh---hhhHHHHHhhhCCCCceEEECchhhh
Confidence 4567887777776 34556899999987332 11 112455555555 7888 99999994
No 120
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=92.95 E-value=2.1 Score=41.02 Aligned_cols=68 Identities=18% Similarity=0.228 Sum_probs=40.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh
Q 014557 208 PSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (422)
-.||+.++|.|.-... ++. -..-|+.+++||.+. .|. ..+-..+.+.+..+
T Consensus 61 ~~r~VcisdtH~~~~~---i~~--~p~gDvlihagdfT~------~g~------------------~~ev~~fn~~~gsl 111 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD---IND--IPDGDVLIHAGDFTN------LGL------------------PEEVIKFNEWLGSL 111 (305)
T ss_pred ceEEEEecCcccccCc---ccc--CCCCceEEeccCCcc------ccC------------------HHHHHhhhHHhccC
Confidence 3799999999964211 111 135689999999983 343 11223333433333
Q ss_pred hcCCcEEEecCCcccccc
Q 014557 288 LSKVPIMVVEGNHEYEEQ 305 (422)
Q Consensus 288 ~~~iP~~~v~GNHD~~~~ 305 (422)
- .---++|.||||...+
T Consensus 112 p-h~yKIVIaGNHELtFd 128 (305)
T KOG3947|consen 112 P-HEYKIVIAGNHELTFD 128 (305)
T ss_pred c-ceeeEEEeeccceeec
Confidence 1 1224789999998754
No 121
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=92.61 E-value=0.19 Score=48.99 Aligned_cols=21 Identities=14% Similarity=0.328 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.+++.++++++=||.
T Consensus 214 ~~~~~~Fl~~n~l~~iiR~He 234 (285)
T cd07415 214 QDVVEEFNHNNGLTLICRAHQ 234 (285)
T ss_pred HHHHHHHHHHCCCeEEEEcCc
Confidence 578889999999999999996
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=92.48 E-value=0.18 Score=49.35 Aligned_cols=21 Identities=19% Similarity=0.376 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.|++.+.++++=||.
T Consensus 222 ~~~~~~Fl~~n~l~~iiR~He 242 (293)
T cd07414 222 KDVVAKFLNKHDLDLICRAHQ 242 (293)
T ss_pred HHHHHHHHHHcCCeEEEECCc
Confidence 478889999999999999996
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.92 E-value=0.27 Score=48.22 Aligned_cols=21 Identities=5% Similarity=0.123 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++++.+++.+.++++=||.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He 235 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQ 235 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcCh
Confidence 578889999999999999996
No 124
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=91.55 E-value=0.22 Score=49.15 Aligned_cols=21 Identities=19% Similarity=0.306 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.+++++.++++=||.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq 251 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQ 251 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCc
Confidence 578889999999999999996
No 125
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=91.54 E-value=0.36 Score=48.70 Aligned_cols=21 Identities=19% Similarity=0.333 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+.+.+.|++.++++++=||.
T Consensus 273 ~~~~~~FL~~n~l~~IIRsHe 293 (377)
T cd07418 273 PDCTEEFLEKNNLKLIIRSHE 293 (377)
T ss_pred HHHHHHHHHHcCCcEEEECCC
Confidence 578889999999999999997
No 126
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=90.72 E-value=2.6 Score=31.40 Aligned_cols=21 Identities=38% Similarity=0.597 Sum_probs=18.1
Q ss_pred EEEEeCCCCCCCEEEEEeecC
Q 014557 165 HHVRLTGLKPDTLYHYQCGDP 185 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~~ 185 (422)
.++.+.+|.|+++|.+||..-
T Consensus 57 ~~~~i~~l~p~~~Y~~~v~a~ 77 (93)
T cd00063 57 TSYTLTGLKPGTEYEFRVRAV 77 (93)
T ss_pred cEEEEccccCCCEEEEEEEEE
Confidence 678899999999999998654
No 127
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=90.58 E-value=1.6 Score=47.67 Aligned_cols=37 Identities=35% Similarity=0.601 Sum_probs=31.1
Q ss_pred EEEEeCCCCCCCEEEEEeecCC---CCCccceeEEEcCCC
Q 014557 165 HHVRLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMPD 201 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~~~---~~~~s~~~~F~T~p~ 201 (422)
..|+|+||+|+|+|-+||.... -+..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5789999999999999986543 236889999999986
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=90.04 E-value=0.46 Score=46.48 Aligned_cols=21 Identities=19% Similarity=0.339 Sum_probs=19.0
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.++.++.+++.+.++++=||.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq 244 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQ 244 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCc
Confidence 578889999999999999996
No 129
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=89.23 E-value=0.39 Score=44.14 Aligned_cols=83 Identities=12% Similarity=0.303 Sum_probs=42.7
Q ss_pred EEEEecCCCCCCh--HHHHHHHH-----hCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHH---HHH
Q 014557 211 IAIVGDVGLTYNT--TSTVSHMI-----SNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRW---DYW 280 (422)
Q Consensus 211 f~v~gD~~~~~~~--~~~~~~l~-----~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~w---d~~ 280 (422)
|++++|.+.+.+. .+.+.++. +.+|+.+|++|+++.......... ...+.++... ...
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 68 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSG------------SVPDSYSFEEDFLKEL 68 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---------------HHCCHHHHHHHHC
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccc------------cccccccccHHHHHHH
Confidence 6789999887433 22333333 457999999999996432110000 0000111111 222
Q ss_pred HHhhhhhhcCCcEEEecCCcccccc
Q 014557 281 GRYMQPVLSKVPIMVVEGNHEYEEQ 305 (422)
Q Consensus 281 ~~~l~~l~~~iP~~~v~GNHD~~~~ 305 (422)
.+.+..+..+++++.+||+||....
T Consensus 69 ~~~~~~i~~~~~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 69 DSFLESILPSTQVVLVPGPNDPTSS 93 (209)
T ss_dssp HHHHCCCHCCSEEEEE--TTCTT-S
T ss_pred HHHHhhcccccEEEEeCCCcccccc
Confidence 3445666778999999999998643
No 130
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=89.15 E-value=1.4 Score=49.97 Aligned_cols=33 Identities=21% Similarity=0.221 Sum_probs=25.4
Q ss_pred EeCCCCCCCEEEEEeecCC---CCCccceeEEEcCC
Q 014557 168 RLTGLKPDTLYHYQCGDPS---IPAMSGTYCFRTMP 200 (422)
Q Consensus 168 ~l~gL~p~T~Y~Y~v~~~~---~~~~s~~~~F~T~p 200 (422)
.+.+|+|+|.|.+||...+ .+..|++.+|.|+-
T Consensus 677 l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 677 LFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred HhhcCCCCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 4578999999999985432 23688899999864
No 131
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=88.70 E-value=0.97 Score=44.59 Aligned_cols=21 Identities=10% Similarity=0.221 Sum_probs=19.1
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.+++.++++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 578889999999999999996
No 132
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=87.72 E-value=1.1 Score=44.34 Aligned_cols=21 Identities=10% Similarity=0.199 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
.+++.+.|++.+.++++-||.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He 253 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHE 253 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCc
Confidence 567889999999999999996
No 133
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=84.36 E-value=7.2 Score=27.85 Aligned_cols=22 Identities=36% Similarity=0.584 Sum_probs=18.8
Q ss_pred EEEEeCCCCCCCEEEEEeecCC
Q 014557 165 HHVRLTGLKPDTLYHYQCGDPS 186 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~~~ 186 (422)
+...+.+|+|+++|.++|..-.
T Consensus 57 ~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 57 TSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred cEEEEeCcCCCCEEEEEEEEEc
Confidence 6788999999999999986543
No 134
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=81.73 E-value=7.1 Score=43.00 Aligned_cols=122 Identities=21% Similarity=0.189 Sum_probs=71.5
Q ss_pred CCceEEEEecC-CCCcEEEEEEcCCCcCcCCCCCCCCCCCccEEEEcccCCCCCeEEEE-----EE--EEEeeeeccCCc
Q 014557 85 EPEQISVSLSS-AHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATG-----RS--LVYSQLYPFLGL 156 (422)
Q Consensus 85 ~P~qi~lt~~~-~~~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g-----~~--~~y~~~~p~~g~ 156 (422)
++.-++++... +.+++.++|....+. +.. + -..-.+.|..++........| .. .+....+| ++.
T Consensus 488 e~~~l~~~~~~~~~dsi~lrW~~~~~~-d~r-~-----llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~-~~~ 559 (1025)
T KOG4258|consen 488 EDLVLQFSSTVTSADSILLRWERYQPP-DMR-D-----LLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPP-DLI 559 (1025)
T ss_pred ccceeeeeeEEeecceeEEEecccCCc-chh-h-----hheeeEeeccCCccccceecCccccccCcceEEeccCC-cCC
Confidence 35555666553 358999999987653 110 0 123467788887543322221 11 11222222 332
Q ss_pred cccccCeEEEEEeCCCCCCCEEEEEeecCCC-------CCccceeEEEcCCCCCCCCcCeEEEEEecCC
Q 014557 157 QNYTSGIIHHVRLTGLKPDTLYHYQCGDPSI-------PAMSGTYCFRTMPDSSSTSYPSRIAIVGDVG 218 (422)
Q Consensus 157 ~~~~~~~~h~v~l~gL~p~T~Y~Y~v~~~~~-------~~~s~~~~F~T~p~~~~~~~~~rf~v~gD~~ 218 (422)
.+ ++......|.||+|.|.|-|-|..-.. .+.|++..++|.|...+. |+.++.-++..
T Consensus 560 p~--~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Psp--Pl~~ls~snsS 624 (1025)
T KOG4258|consen 560 PN--DGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSP--PLDVLSKSNSS 624 (1025)
T ss_pred Cc--cccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCC--cchhhhccCcc
Confidence 22 233347889999999999998754311 278999999999875433 67777666653
No 135
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=78.65 E-value=15 Score=35.66 Aligned_cols=80 Identities=16% Similarity=0.208 Sum_probs=50.4
Q ss_pred CeEEEEEecCCCCCChHHHHHHHH---h---------CCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhh
Q 014557 208 PSRIAIVGDVGLTYNTTSTVSHMI---S---------NRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQP 275 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~~~~~~l~---~---------~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~ 275 (422)
..+|+++||.++.. ..+++++. + ..|-.+|+.|+++..-.. .+. ...+.|++
T Consensus 27 ~~~~VilSDV~LD~--p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~--~~~------------~~~~~yk~ 90 (291)
T PTZ00235 27 RHNWIIMHDVYLDS--PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFD--YNR------------NFHKVYIK 90 (291)
T ss_pred ceEEEEEEeeccCC--HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCccc--CCC------------CchHHHHH
Confidence 47999999999863 23333332 1 128899999999843110 000 12234666
Q ss_pred HHHHHHHh-h---hhhhcCCcEEEecCCcccc
Q 014557 276 RWDYWGRY-M---QPVLSKVPIMVVEGNHEYE 303 (422)
Q Consensus 276 ~wd~~~~~-l---~~l~~~iP~~~v~GNHD~~ 303 (422)
.++.+... + ..+..+.-++.|||-.|-.
T Consensus 91 ~Fd~La~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 91 GFEKLSVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 67766542 2 3456778899999999974
No 136
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=77.28 E-value=14 Score=41.93 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=42.7
Q ss_pred CceEEEEecCCCCcEEEEEEcCCCcCcCCCCCCCCCCCccEEEEcccCCCCCeEEEEEEEEEeeeeccCCccccccCeEE
Q 014557 86 PEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRYGTRRSQLNRKATGRSLVYSQLYPFLGLQNYTSGIIH 165 (422)
Q Consensus 86 P~qi~lt~~~~~~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~yg~~~~~~~~~~~g~~~~y~~~~p~~g~~~~~~~~~h 165 (422)
|..+.+ .+.+.++|.|+|.......|- -..=.|+|-...++.. ..... +..+-.-
T Consensus 823 p~~~~~-~~~s~s~~~v~W~~~~~~nG~--------l~gY~v~Y~~~~~~~~-----~~~~~-----------~i~~~~~ 877 (1051)
T KOG3513|consen 823 PTKLSA-KPLSSSEVNLSWKPPLWDNGK--------LTGYEVKYWKINEKEG-----SLSRV-----------QIAGNRT 877 (1051)
T ss_pred Ccccee-ecccCceEEEEecCcCccCCc--------cceeEEEEEEcCCCcc-----cccce-----------eecCCcc
Confidence 444433 233457899999664332221 1233578877665531 11100 1123336
Q ss_pred EEEeCCCCCCCEEEEEeec
Q 014557 166 HVRLTGLKPDTLYHYQCGD 184 (422)
Q Consensus 166 ~v~l~gL~p~T~Y~Y~v~~ 184 (422)
.++|+||+|+|.|++.+.+
T Consensus 878 ~~~ltgL~~~T~Y~~~vrA 896 (1051)
T KOG3513|consen 878 SWRLTGLEPNTKYRFYVRA 896 (1051)
T ss_pred eEeeeCCCCCceEEEEEEE
Confidence 7899999999999998754
No 137
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=73.68 E-value=33 Score=39.56 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCCEEEEEeecCCC---CCccceeEEEcCC
Q 014557 165 HHVRLTGLKPDTLYHYQCGDPSI---PAMSGTYCFRTMP 200 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~~~~---~~~s~~~~F~T~p 200 (422)
++.+|.||+|.|.|.|||...+. +..|+..+|+|+-
T Consensus 574 ~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 574 TEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLS 612 (1381)
T ss_pred cEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEecc
Confidence 67789999999999999965442 3567788899864
No 138
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=50.32 E-value=18 Score=31.73 Aligned_cols=36 Identities=19% Similarity=0.227 Sum_probs=23.4
Q ss_pred EEeCCCCCCCEEEEE--eecCCCCCccceeEEEcCCCC
Q 014557 167 VRLTGLKPDTLYHYQ--CGDPSIPAMSGTYCFRTMPDS 202 (422)
Q Consensus 167 v~l~gL~p~T~Y~Y~--v~~~~~~~~s~~~~F~T~p~~ 202 (422)
=++++|.|||+||.+ |..+.....|.+..-.|.|..
T Consensus 104 YqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~~ 141 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNRK 141 (184)
T ss_pred EEeeccCCCcEEEEEEEEecCccceecceecccccccc
Confidence 357999999999976 444443344555566666554
No 139
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=46.11 E-value=24 Score=35.12 Aligned_cols=21 Identities=24% Similarity=0.441 Sum_probs=18.3
Q ss_pred HHHHHHHHHHcCCcEEEEccc
Q 014557 399 RVAMEDLLYKYGVDVVFNGHV 419 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~ 419 (422)
...+++++++.++|+++-||.
T Consensus 233 ~~~v~~f~~~~~ldlivRaHq 253 (331)
T KOG0374|consen 233 PAVVEDFCKKLDLDLIVRAHQ 253 (331)
T ss_pred HHHHHHHHHHhCcceEEEcCc
Confidence 467888999999999999984
No 140
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=45.40 E-value=41 Score=31.97 Aligned_cols=34 Identities=18% Similarity=0.362 Sum_probs=19.7
Q ss_pred EEEEecCCCCCChHHHHHHHH--hCCC-CEEEEcCCccc
Q 014557 211 IAIVGDVGLTYNTTSTVSHMI--SNRP-DLILLVGDVTY 246 (422)
Q Consensus 211 f~v~gD~~~~~~~~~~~~~l~--~~~p-Dfvl~~GDl~y 246 (422)
+.+.||+|... .+.++-+. ..-| .=-+++||+++
T Consensus 45 vtvcGDIHGQf--~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 45 VTVCGDIHGQF--YDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cEEeecccchH--HHHHHHHHhCCCCCCCceEeecchhc
Confidence 56899999752 33333222 1122 24578899995
No 141
>PRK09453 phosphodiesterase; Provisional
Probab=43.71 E-value=23 Score=31.63 Aligned_cols=14 Identities=29% Similarity=0.259 Sum_probs=12.0
Q ss_pred HcCCcEEEEccccC
Q 014557 408 KYGVDVVFNGHVSE 421 (422)
Q Consensus 408 ~~~VdlvlsGH~H~ 421 (422)
..++|++++||+|.
T Consensus 116 ~~~~d~vi~GHtH~ 129 (182)
T PRK09453 116 LHDGDVLVYGHTHI 129 (182)
T ss_pred ccCCCEEEECCCCC
Confidence 45789999999995
No 142
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=40.43 E-value=35 Score=28.15 Aligned_cols=23 Identities=43% Similarity=0.788 Sum_probs=20.1
Q ss_pred CeEEEEEeCCCCCCCEEEEEeec
Q 014557 162 GIIHHVRLTGLKPDTLYHYQCGD 184 (422)
Q Consensus 162 ~~~h~v~l~gL~p~T~Y~Y~v~~ 184 (422)
+-++++.+.++.+|+.|-|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45688999999999999999973
No 143
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=39.50 E-value=39 Score=27.17 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=19.9
Q ss_pred CeEEEEEeCCCCCCCEEEEEeec
Q 014557 162 GIIHHVRLTGLKPDTLYHYQCGD 184 (422)
Q Consensus 162 ~~~h~v~l~gL~p~T~Y~Y~v~~ 184 (422)
+-+.++.+.++.+|+.|.|||..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 34588999999999999999965
No 144
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=39.40 E-value=1.9e+02 Score=23.32 Aligned_cols=23 Identities=13% Similarity=0.160 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCcEEEEccccC
Q 014557 399 RVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 399 r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.+.+.+..+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 36677888999999999888753
No 145
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=37.59 E-value=52 Score=31.48 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=21.3
Q ss_pred EEEEecCCCCCChHHHHHHH--HhCCCC-EEEEcCCccc
Q 014557 211 IAIVGDVGLTYNTTSTVSHM--ISNRPD-LILLVGDVTY 246 (422)
Q Consensus 211 f~v~gD~~~~~~~~~~~~~l--~~~~pD-fvl~~GDl~y 246 (422)
+.+.||.|... ...++.+ -...|| -.++.||.+.
T Consensus 62 vtvcGDvHGqf--~dl~ELfkiGG~~pdtnylfmGDyvd 98 (319)
T KOG0371|consen 62 VTVCGDVHGQF--HDLIELFKIGGLAPDTNYLFMGDYVD 98 (319)
T ss_pred eEEecCcchhH--HHHHHHHHccCCCCCcceeeeeeecc
Confidence 67899999753 3333333 234555 3567899995
No 146
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=36.22 E-value=34 Score=29.89 Aligned_cols=22 Identities=23% Similarity=0.451 Sum_probs=17.6
Q ss_pred HHHHHHHHHcCCcEEEEccccC
Q 014557 400 VAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 400 ~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
+.+.-|-++.+||+.++||+|.
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~ 118 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHK 118 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCcee
Confidence 4455566777999999999995
No 147
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=35.29 E-value=46 Score=26.50 Aligned_cols=24 Identities=21% Similarity=0.164 Sum_probs=20.4
Q ss_pred CeEEEEEeCCCCCCCEEEEEeecC
Q 014557 162 GIIHHVRLTGLKPDTLYHYQCGDP 185 (422)
Q Consensus 162 ~~~h~v~l~gL~p~T~Y~Y~v~~~ 185 (422)
+-++++.+.++.+|+.|.||+...
T Consensus 46 ~gvw~~~v~~~~~g~~Y~y~i~~~ 69 (100)
T cd02860 46 NGVWSVTLDGDLEGYYYLYEVKVY 69 (100)
T ss_pred CCEEEEEeCCccCCcEEEEEEEEe
Confidence 446889999999999999999743
No 148
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=34.41 E-value=49 Score=25.49 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=17.7
Q ss_pred EEEEEeCCCCCCCEEEEEeec
Q 014557 164 IHHVRLTGLKPDTLYHYQCGD 184 (422)
Q Consensus 164 ~h~v~l~gL~p~T~Y~Y~v~~ 184 (422)
++++.+.++ +|..|.|++..
T Consensus 41 ~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 41 WFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred EEEEEeCCC-CCCeEEEEECC
Confidence 578999999 99999999973
No 149
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=30.86 E-value=41 Score=32.42 Aligned_cols=48 Identities=25% Similarity=0.311 Sum_probs=33.0
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCc-EEEEccc
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVD-VVFNGHV 419 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd-lvlsGH~ 419 (422)
+.|+.-|+..++-..| ++-.|.| ...+-+.+.+||++++.| +|+.||+
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD 163 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHD 163 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCch
Confidence 4688888877654443 3333432 123457888999999999 5889997
No 150
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=30.63 E-value=51 Score=31.94 Aligned_cols=48 Identities=25% Similarity=0.343 Sum_probs=33.1
Q ss_pred HHHHHHHHhcccCCCCEEEEEeCCCcccCCcccccchHHHHHHHHHHHHHcCCc-EEEEccc
Q 014557 359 KWLEEDLANVEREVTPWLVATWHAPWYSTYKAHYREAECMRVAMEDLLYKYGVD-VVFNGHV 419 (422)
Q Consensus 359 ~WL~~~L~~~~~~~~~w~Iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd-lvlsGH~ 419 (422)
+.|+.-|+...+-..| ....|.| ...+-+.+.+||++++.| +|++||+
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD 164 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHD 164 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCch
Confidence 5688888877544443 3333432 234567888999999999 6889997
No 151
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=30.20 E-value=43 Score=26.66 Aligned_cols=20 Identities=35% Similarity=0.453 Sum_probs=15.6
Q ss_pred EEEEeCCCCCCCEEEEEeec
Q 014557 165 HHVRLTGLKPDTLYHYQCGD 184 (422)
Q Consensus 165 h~v~l~gL~p~T~Y~Y~v~~ 184 (422)
-.+.|.+|+|+|.|..+|..
T Consensus 67 ~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 67 SSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEEES--TTSEEEEEEEE
T ss_pred CEEEEeCCCCCCCEEEEEEE
Confidence 45689999999999999876
No 152
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=29.04 E-value=48 Score=32.50 Aligned_cols=18 Identities=44% Similarity=0.717 Sum_probs=15.3
Q ss_pred EEEeCCCCCCCEEEEEee
Q 014557 166 HVRLTGLKPDTLYHYQCG 183 (422)
Q Consensus 166 ~v~l~gL~p~T~Y~Y~v~ 183 (422)
+-+|.+|+|+|+||+-|-
T Consensus 16 ~~t~~~L~p~t~YyfdVF 33 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVF 33 (300)
T ss_pred eEEeccCCCCCeEEEEEE
Confidence 457889999999999974
No 153
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=29.03 E-value=1.6e+02 Score=28.29 Aligned_cols=75 Identities=20% Similarity=0.304 Sum_probs=49.6
Q ss_pred CeEEEEEecCCCCCChHHHHHHHHhCCCCEEEEcCCcccccccccCCCCCCcccccCCCCCCccchhhHHHHHHHhhhhh
Q 014557 208 PSRIAIVGDVGLTYNTTSTVSHMISNRPDLILLVGDVTYANLYLTNGTGSDCYACSFANSPIHETYQPRWDYWGRYMQPV 287 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~~~~~~l~~~~pDfvl~~GDl~yad~~~~~g~~~~~y~~~~~~~~~~e~y~~~wd~~~~~l~~l 287 (422)
..+|++.+|.+... ....++.+.+.+|+++++.|=.+|--++. -| +.....-.+.|+.+
T Consensus 176 ~~~i~faSDvqGp~-~~~~l~~i~e~~P~v~ii~GPpty~lg~r-~~-------------------~~~~E~~irNl~~i 234 (304)
T COG2248 176 KSSIVFASDVQGPI-NDEALEFILEKRPDVLIIGGPPTYLLGYR-VG-------------------PKSLEKGIRNLERI 234 (304)
T ss_pred CeEEEEcccccCCC-ccHHHHHHHhcCCCEEEecCCchhHhhhh-cC-------------------hHHHHHHHHHHHHH
Confidence 46999999998653 34578888899999999999999743221 01 01222334556666
Q ss_pred hcCCcEEEecCCcccc
Q 014557 288 LSKVPIMVVEGNHEYE 303 (422)
Q Consensus 288 ~~~iP~~~v~GNHD~~ 303 (422)
....+--.|..-|=..
T Consensus 235 i~~~~~~lViDHHllR 250 (304)
T COG2248 235 IEETNATLVIDHHLLR 250 (304)
T ss_pred HHhCcceEEEeehhhc
Confidence 6666666677777654
No 154
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=27.74 E-value=55 Score=32.07 Aligned_cols=20 Identities=30% Similarity=0.468 Sum_probs=17.3
Q ss_pred EEeCCCCCCCEEEEEeecCC
Q 014557 167 VRLTGLKPDTLYHYQCGDPS 186 (422)
Q Consensus 167 v~l~gL~p~T~Y~Y~v~~~~ 186 (422)
.+|.||+||+.|-..|....
T Consensus 262 etI~~L~PG~~Yl~dV~~~~ 281 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVNG 281 (300)
T ss_pred eecccCCCCcEEEEEEEEec
Confidence 37999999999999987765
No 155
>PRK10425 DNase TatD; Provisional
Probab=26.16 E-value=80 Score=30.14 Aligned_cols=38 Identities=21% Similarity=0.141 Sum_probs=24.4
Q ss_pred EEEeccccCCCCHhHHHHHHHHHHhcccCCCCEEEEEeCCC
Q 014557 343 LMLAAYVSFDKSGDQYKWLEEDLANVEREVTPWLVATWHAP 383 (422)
Q Consensus 343 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P 383 (422)
|+||-..+......|.++++++|+-+.+-+.| | +.|.+
T Consensus 92 iGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~P--v-~iH~r 129 (258)
T PRK10425 92 CGLDFNRNFSTPEEQERAFVAQLAIAAELNMP--V-FMHCR 129 (258)
T ss_pred eeeccccCCCCHHHHHHHHHHHHHHHHHhCCC--e-EEEEe
Confidence 55664433333578999999999987655554 3 33654
No 156
>COG3065 Slp Starvation-inducible outer membrane lipoprotein [Cell envelope biogenesis, outer membrane]
Probab=25.55 E-value=75 Score=28.61 Aligned_cols=26 Identities=23% Similarity=0.287 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhccccccCCcCCCCCC
Q 014557 24 LVLTLTITSILLANGAMAMAIPTTLDGPF 52 (422)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 52 (422)
+.++++.++++|++.+ ++|..|.|++
T Consensus 9 ~~~l~~~laflLsgC~---tiPk~l~g~~ 34 (191)
T COG3065 9 KGALIGTLAFLLSGCV---TIPKALKGES 34 (191)
T ss_pred HHHHHHHHHHHHhhcc---cCChhhcCCC
Confidence 3445555666666544 4999999876
No 157
>KOG4720 consensus Ethanolamine kinase [Lipid transport and metabolism]
Probab=24.98 E-value=95 Score=30.70 Aligned_cols=37 Identities=22% Similarity=0.506 Sum_probs=25.8
Q ss_pred eEEEEeCc--EEEEEEeccccC---CCCHhHHHHHHHHHHhcc
Q 014557 332 YYSFNAGG--IHFLMLAAYVSF---DKSGDQYKWLEEDLANVE 369 (422)
Q Consensus 332 yysf~~g~--v~fi~Ldt~~~~---~~~~~Q~~WL~~~L~~~~ 369 (422)
|-.||+|+ -.|.+++ ..|| ...++|++||+.-|+...
T Consensus 281 Y~afDIgNHFnE~aGv~-evDYSlyp~rE~Q~qwl~~YLq~~k 322 (391)
T KOG4720|consen 281 YQAFDIGNHFNEYAGVE-EVDYSLYPTREEQLQWLRDYLQAYK 322 (391)
T ss_pred hhheehhhhHHhhcCCC-ccchhcCCCHHHHHHHHHHHHhhcc
Confidence 45678877 4455565 2333 456899999999998864
No 158
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=24.46 E-value=1.4e+02 Score=27.95 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=19.8
Q ss_pred EEEEecCCCCCChHHHHHHHHh--CCCC-EEEEcCCccc
Q 014557 211 IAIVGDVGLTYNTTSTVSHMIS--NRPD-LILLVGDVTY 246 (422)
Q Consensus 211 f~v~gD~~~~~~~~~~~~~l~~--~~pD-fvl~~GDl~y 246 (422)
+-+.||.|.. ..+.++-... .-|| --|+.||+++
T Consensus 48 VTvCGDIHGQ--FyDL~eLFrtgG~vP~tnYiFmGDfVD 84 (306)
T KOG0373|consen 48 VTVCGDIHGQ--FYDLLELFRTGGQVPDTNYIFMGDFVD 84 (306)
T ss_pred eeEeeccchh--HHHHHHHHHhcCCCCCcceEEeccccc
Confidence 5689999965 2333333321 2344 3467899995
No 159
>CHL00186 psaI photosystem I subunit VIII; Validated
Probab=24.00 E-value=28 Score=22.67 Aligned_cols=13 Identities=54% Similarity=0.922 Sum_probs=11.5
Q ss_pred CCCCCCCccccce
Q 014557 1 MASSSLPSISLPV 13 (422)
Q Consensus 1 ~~~~~~~~~~~~~ 13 (422)
|+.|.||||-.|+
T Consensus 1 m~as~LPsI~VPl 13 (36)
T CHL00186 1 MTASNLPSILVPL 13 (36)
T ss_pred CccccCchhHHhH
Confidence 7889999999885
No 160
>PF15284 PAGK: Phage-encoded virulence factor
Probab=23.60 E-value=1.3e+02 Score=21.98 Aligned_cols=17 Identities=24% Similarity=0.385 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHhccc
Q 014557 24 LVLTLTITSILLANGAM 40 (422)
Q Consensus 24 ~~~~~~~~~~~~~~~~~ 40 (422)
|.|++.|++++.+|++-
T Consensus 9 L~l~~~LsA~~FSasam 25 (61)
T PF15284_consen 9 LALVFILSAAGFSASAM 25 (61)
T ss_pred HHHHHHHHHhhhhHHHH
Confidence 45555555555554433
No 161
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=23.40 E-value=1e+02 Score=23.30 Aligned_cols=24 Identities=21% Similarity=0.418 Sum_probs=19.3
Q ss_pred eEEEEEeC-CCCCCC-EEEEEeecCC
Q 014557 163 IIHHVRLT-GLKPDT-LYHYQCGDPS 186 (422)
Q Consensus 163 ~~h~v~l~-gL~p~T-~Y~Y~v~~~~ 186 (422)
-+++++|. +|++|+ .|.|+|....
T Consensus 49 G~w~~~~~~~~~~g~~~Y~y~i~~~~ 74 (85)
T PF02922_consen 49 GVWEVTVPGDLPPGGYYYKYRIDGDD 74 (85)
T ss_dssp TEEEEEEEGCGTTTT-EEEEEEEETT
T ss_pred CEEEEEEcCCcCCCCEEEEEEEEeCC
Confidence 34788888 889885 9999998664
No 162
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=23.08 E-value=1.6e+02 Score=29.63 Aligned_cols=35 Identities=20% Similarity=0.279 Sum_probs=20.4
Q ss_pred EEEEEecCCCCCChHHHHHHHH-hCCCC--EEEEcCCccc
Q 014557 210 RIAIVGDVGLTYNTTSTVSHMI-SNRPD--LILLVGDVTY 246 (422)
Q Consensus 210 rf~v~gD~~~~~~~~~~~~~l~-~~~pD--fvl~~GDl~y 246 (422)
-|-+.||+|.. ..+.++-.. .-.|. --+++||.++
T Consensus 89 PiTVCGDIHGQ--f~DLmKLFEVGG~PA~t~YLFLGDYVD 126 (517)
T KOG0375|consen 89 PITVCGDIHGQ--FFDLMKLFEVGGSPANTRYLFLGDYVD 126 (517)
T ss_pred CeeEecccchH--HHHHHHHHHccCCcccceeEeeccccc
Confidence 36789999965 223333332 12332 3468899995
No 163
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=22.96 E-value=3.8e+02 Score=31.00 Aligned_cols=76 Identities=18% Similarity=0.219 Sum_probs=44.9
Q ss_pred CCCceEEEEecCCCCcEEEEEEcCCCcCcCCCCCCCCCCCccEEEE----cccCCCCCeEEEEEEEEEeeeeccCCcccc
Q 014557 84 FEPEQISVSLSSAHDSVWISWITGEFQIGNNLKPLDPKSVVSVVRY----GTRRSQLNRKATGRSLVYSQLYPFLGLQNY 159 (422)
Q Consensus 84 ~~P~qi~lt~~~~~~~~~v~W~T~~~~~g~~~~~~~p~~~~~~V~y----g~~~~~~~~~~~g~~~~y~~~~p~~g~~~~ 159 (422)
..|+++++.=-. .+++.++|.-++.. ..++..| .+.....++.+. + .|..
T Consensus 616 gpP~~v~~~~i~-~t~~~lsW~~g~dn------------~SpI~~Y~iq~rt~~~~~W~~v~-~-------vp~~----- 669 (1051)
T KOG3513|consen 616 GPPPDVHVDDIS-DTTARLSWSPGSDN------------NSPIEKYTIQFRTPFPGKWKAVT-T-------VPGN----- 669 (1051)
T ss_pred CCCCceeEeeec-cceEEEEeecCCCC------------CCCceEEeEEecCCCCCcceEee-E-------CCCc-----
Confidence 457777664222 57899999876531 1234444 444333444333 1 2211
Q ss_pred ccCeEEEEEeCCCCCCCEEEEEeecCC
Q 014557 160 TSGIIHHVRLTGLKPDTLYHYQCGDPS 186 (422)
Q Consensus 160 ~~~~~h~v~l~gL~p~T~Y~Y~v~~~~ 186 (422)
..|- +.+++-+|.|-..|.+||.+-+
T Consensus 670 ~~~~-~sa~vv~L~Pwv~YeFRV~AvN 695 (1051)
T KOG3513|consen 670 ITGD-ESATVVNLSPWVEYEFRVVAVN 695 (1051)
T ss_pred ccCc-cceeEEccCCCcceEEEEEEEc
Confidence 1233 5688889999999999986543
No 164
>cd02850 Cellulase_N_term Cellulase N-terminus domain. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually catagorized into either exoglucanases which sequentially release sugar units from the cellulose chain and endoglucanases which also attack the chain internally. The N-terminus of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=22.59 E-value=2.2e+02 Score=22.00 Aligned_cols=23 Identities=13% Similarity=0.215 Sum_probs=19.5
Q ss_pred CeEEEEEeCCC-CCCCEEEEEeec
Q 014557 162 GIIHHVRLTGL-KPDTLYHYQCGD 184 (422)
Q Consensus 162 ~~~h~v~l~gL-~p~T~Y~Y~v~~ 184 (422)
..++++.++.| +|||+|+-+++.
T Consensus 55 ~~~~~~DFS~~~~pG~~Y~l~~~~ 78 (86)
T cd02850 55 DNVHIIDFSSYRTEGTGYYLSVDG 78 (86)
T ss_pred CeEEEEEcCCCcCCCCeEEEEECC
Confidence 37899999999 889999888764
No 165
>PF13205 Big_5: Bacterial Ig-like domain
Probab=21.79 E-value=1.3e+02 Score=23.63 Aligned_cols=16 Identities=31% Similarity=0.393 Sum_probs=13.2
Q ss_pred CCCCCCCEEEEEeecC
Q 014557 170 TGLKPDTLYHYQCGDP 185 (422)
Q Consensus 170 ~gL~p~T~Y~Y~v~~~ 185 (422)
..|++|++|.-.+..+
T Consensus 70 ~~L~~~t~Y~v~i~~~ 85 (107)
T PF13205_consen 70 QPLKPGTTYTVTIDSG 85 (107)
T ss_pred CcCCCCCEEEEEECCC
Confidence 4699999999998654
No 166
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=21.72 E-value=92 Score=29.71 Aligned_cols=32 Identities=22% Similarity=0.125 Sum_probs=21.3
Q ss_pred EEEeccccCCCCHhHHHHHHHHHHhcccCCCC
Q 014557 343 LMLAAYVSFDKSGDQYKWLEEDLANVEREVTP 374 (422)
Q Consensus 343 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 374 (422)
|+||-+........|.++++++|+-+.+-+.|
T Consensus 98 iGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~P 129 (258)
T PRK11449 98 IGLDLFGDDPQFERQQWLLDEQLKLAKRYDLP 129 (258)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHhCCC
Confidence 45664322223467999999999987665654
No 167
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=21.62 E-value=2.2e+02 Score=28.94 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=33.5
Q ss_pred HHHHHHhcccCCCCEEEEEeCCCc-ccCCcccccchHHHHHHHHHHHHHcCCcEEEEccccC
Q 014557 361 LEEDLANVEREVTPWLVATWHAPW-YSTYKAHYREAECMRVAMEDLLYKYGVDVVFNGHVSE 421 (422)
Q Consensus 361 L~~~L~~~~~~~~~w~Iv~~H~P~-y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 421 (422)
.+.+++.++ +...-+|++.|.-. |... ....+.+|..-+...++++++.+|-|.
T Consensus 213 ~~~~v~~a~-k~adlviv~~HwG~ey~~~------p~~~q~~~a~~lidAGa~iIvGhhpHv 267 (372)
T COG2843 213 VLAAVLAAK-KGADLVIVQPHWGVEYAYE------PAAGQRALARRLIDAGADIIVGHHPHV 267 (372)
T ss_pred hHHHHHhhh-ccCCEEEEeccccccccCC------CcHHHHHHHHHHHhcCcCeEecCCCCc
Confidence 444555554 34556888888743 2211 112245566666668999999999996
No 168
>PRK10301 hypothetical protein; Provisional
Probab=21.22 E-value=3.6e+02 Score=22.64 Aligned_cols=16 Identities=13% Similarity=0.299 Sum_probs=7.6
Q ss_pred CCCCCCccccCCCcCC
Q 014557 48 LDGPFKPVTIPLDESF 63 (422)
Q Consensus 48 ~~~~~~~~~~~~~~~~ 63 (422)
+..+..=|+..|+..+
T Consensus 41 v~~~P~~V~L~F~e~v 56 (124)
T PRK10301 41 VTAAPQALTLNFSEGI 56 (124)
T ss_pred cccCCCEEEEEcCCCc
Confidence 4444444555555444
No 169
>PF14030 DUF4245: Protein of unknown function (DUF4245)
Probab=20.81 E-value=1.3e+02 Score=26.70 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=26.0
Q ss_pred CCCCCCCCccccCCCCCCCceEEEEecCCCCcEEEEEEcCC
Q 014557 68 IDLPDTDPRVQRTVEGFEPEQISVSLSSAHDSVWISWITGE 108 (422)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~P~qi~lt~~~~~~~~~v~W~T~~ 108 (422)
.++|-..|. -+.++.|+.....-.+....-.|-|.|.+
T Consensus 54 a~~pv~~P~---lP~gW~~nSar~~~~~g~~~w~vG~vt~~ 91 (169)
T PF14030_consen 54 APFPVRAPE---LPEGWKANSARRQGVGGVPAWHVGYVTPD 91 (169)
T ss_pred CCCCeeCCC---CCCCceeeeEEecCCCCcceEEEEEEcCC
Confidence 455555554 34568888886665554578999999975
No 170
>COG4549 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.64 E-value=5.7e+02 Score=22.76 Aligned_cols=21 Identities=10% Similarity=0.050 Sum_probs=17.5
Q ss_pred cCeEEEEEeCC-CCCCCEEEEE
Q 014557 161 SGIIHHVRLTG-LKPDTLYHYQ 181 (422)
Q Consensus 161 ~~~~h~v~l~g-L~p~T~Y~Y~ 181 (422)
++++.+.++.+ +.-+++-++.
T Consensus 115 D~fvV~~~la~D~p~~~tl~f~ 136 (178)
T COG4549 115 DEFVVRGTLAEDTPVGTTLIFP 136 (178)
T ss_pred cceEEEEEecCCCcccceEecc
Confidence 78889999988 8888888876
No 171
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.21 E-value=2.8e+02 Score=28.87 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=26.3
Q ss_pred CeEEEEEecCCCCCChHHHHHHHH---h-CC-CCEEEEcCCccc
Q 014557 208 PSRIAIVGDVGLTYNTTSTVSHMI---S-NR-PDLILLVGDVTY 246 (422)
Q Consensus 208 ~~rf~v~gD~~~~~~~~~~~~~l~---~-~~-pDfvl~~GDl~y 246 (422)
+.||+++||.... ....++++. + .. .|+++.+|++.-
T Consensus 5 ~~kILv~Gd~~Gr--~~eli~rI~~v~Kk~GpFd~liCvGnfF~ 46 (528)
T KOG2476|consen 5 DAKILVCGDVEGR--FDELIKRIQKVNKKSGPFDLLICVGNFFG 46 (528)
T ss_pred CceEEEEcCcccc--HHHHHHHHHHHhhcCCCceEEEEecccCC
Confidence 4699999998643 344555554 2 33 699999999983
Done!